View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6914_low_64 (Length: 228)

Name: NF6914_low_64
Description: NF6914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6914_low_64
NF6914_low_64
[»] chr1 (43 HSPs)
chr1 (57-212)||(33487019-33487173)
chr1 (57-212)||(424280-424434)
chr1 (59-212)||(32784088-32784240)
chr1 (57-212)||(28678119-28678273)
chr1 (61-212)||(3232770-3232920)
chr1 (57-212)||(12871599-12871753)
chr1 (57-212)||(7995549-7995703)
chr1 (61-212)||(14265266-14265416)
chr1 (61-212)||(29205267-29205417)
chr1 (57-198)||(27534677-27534817)
chr1 (57-212)||(42490871-42491025)
chr1 (57-212)||(18343592-18343745)
chr1 (65-212)||(4882348-4882494)
chr1 (61-212)||(13488525-13488675)
chr1 (61-212)||(20411555-20411705)
chr1 (57-212)||(45750456-45750610)
chr1 (74-210)||(37822336-37822471)
chr1 (100-212)||(44517167-44517279)
chr1 (57-212)||(45193615-45193769)
chr1 (106-212)||(51418040-51418145)
chr1 (57-212)||(33939002-33939145)
chr1 (97-209)||(10627017-10627129)
chr1 (64-212)||(17347584-17347729)
chr1 (57-212)||(42276335-42276487)
chr1 (107-212)||(29726585-29726690)
chr1 (135-212)||(15791264-15791341)
chr1 (61-181)||(4871046-4871165)
chr1 (61-181)||(9298434-9298552)
chr1 (126-212)||(15391241-15391327)
chr1 (61-212)||(32878690-32878840)
chr1 (62-212)||(33125794-33125943)
chr1 (139-186)||(28399336-28399383)
chr1 (171-212)||(2513592-2513633)
chr1 (160-212)||(29069831-29069883)
chr1 (157-212)||(25689832-25689887)
chr1 (61-112)||(25689932-25689982)
chr1 (57-98)||(22032174-22032216)
chr1 (154-188)||(50107927-50107961)
chr1 (61-90)||(8937612-8937641)
chr1 (139-212)||(13999025-13999098)
chr1 (58-131)||(15791558-15791630)
chr1 (155-200)||(45425473-45425518)
chr1 (160-212)||(47551177-47551227)
[»] chr4 (53 HSPs)
chr4 (57-212)||(7060302-7060456)
chr4 (57-212)||(22757072-22757226)
chr4 (64-212)||(13965545-13965692)
chr4 (57-209)||(43244373-43244524)
chr4 (57-212)||(24825627-24825781)
chr4 (57-212)||(29268766-29268920)
chr4 (58-212)||(394263-394416)
chr4 (57-212)||(25658145-25658299)
chr4 (59-212)||(8712510-8712662)
chr4 (57-212)||(6911658-6911812)
chr4 (61-212)||(26742452-26742602)
chr4 (57-212)||(30202016-30202170)
chr4 (57-212)||(44757031-44757185)
chr4 (66-212)||(7083805-7083950)
chr4 (59-212)||(27394810-27394962)
chr4 (57-212)||(11210302-11210456)
chr4 (65-212)||(20399892-20400038)
chr4 (57-212)||(24568702-24568856)
chr4 (61-212)||(26674354-26674504)
chr4 (69-212)||(38944137-38944278)
chr4 (59-212)||(51152105-51152256)
chr4 (57-212)||(478001-478154)
chr4 (57-212)||(39837572-39837727)
chr4 (57-209)||(24100117-24100270)
chr4 (62-212)||(5814330-5814479)
chr4 (59-212)||(19745369-19745522)
chr4 (59-212)||(19794284-19794437)
chr4 (61-209)||(7861198-7861344)
chr4 (96-212)||(43493276-43493392)
chr4 (67-212)||(45351059-45351205)
chr4 (67-212)||(45360538-45360684)
chr4 (98-212)||(50801235-50801349)
chr4 (59-172)||(31521962-31522074)
chr4 (57-212)||(29922812-29922969)
chr4 (57-212)||(626538-626690)
chr4 (81-212)||(6881958-6882088)
chr4 (57-212)||(24611788-24611942)
chr4 (57-212)||(39523396-39523541)
chr4 (66-212)||(20887745-20887889)
chr4 (96-212)||(2447816-2447932)
chr4 (62-212)||(12717106-12717255)
chr4 (59-212)||(42197533-42197686)
chr4 (112-212)||(8517445-8517545)
chr4 (65-212)||(13586229-13586370)
chr4 (61-212)||(22049393-22049543)
chr4 (76-199)||(36124351-36124471)
chr4 (143-212)||(28837128-28837197)
chr4 (57-150)||(7084184-7084276)
chr4 (137-199)||(32616827-32616889)
chr4 (160-212)||(35945980-35946032)
chr4 (57-173)||(3159021-3159136)
chr4 (139-212)||(38431482-38431555)
chr4 (57-124)||(28837055-28837119)
[»] scaffold0312 (1 HSPs)
scaffold0312 (57-212)||(6115-6269)
[»] chr5 (39 HSPs)
chr5 (57-212)||(17331306-17331460)
chr5 (63-212)||(17699537-17699685)
chr5 (59-212)||(29097769-29097921)
chr5 (57-209)||(28040607-28040758)
chr5 (57-212)||(6635227-6635382)
chr5 (57-212)||(33164457-33164611)
chr5 (57-212)||(32347703-32347858)
chr5 (64-212)||(34431045-34431192)
chr5 (57-212)||(17096228-17096385)
chr5 (61-197)||(27241046-27241181)
chr5 (57-212)||(6281022-6281176)
chr5 (58-212)||(20483165-20483318)
chr5 (62-212)||(12439623-12439771)
chr5 (57-180)||(43493850-43493972)
chr5 (62-212)||(178093-178244)
chr5 (96-212)||(39179817-39179933)
chr5 (57-212)||(3740336-3740489)
chr5 (57-211)||(26295047-26295201)
chr5 (62-212)||(42609127-42609276)
chr5 (57-209)||(23882108-23882259)
chr5 (57-212)||(7771810-7771949)
chr5 (71-212)||(42396501-42396641)
chr5 (110-212)||(12891706-12891808)
chr5 (61-212)||(981017-981164)
chr5 (135-217)||(2555334-2555416)
chr5 (106-212)||(18653808-18653914)
chr5 (96-209)||(3079297-3079410)
chr5 (100-212)||(17687225-17687337)
chr5 (61-183)||(39531422-39531540)
chr5 (126-212)||(11734808-11734892)
chr5 (139-212)||(25487667-25487740)
chr5 (143-212)||(32309226-32309295)
chr5 (61-212)||(6681865-6682013)
chr5 (157-212)||(35275976-35276032)
chr5 (64-209)||(11824826-11824970)
chr5 (139-212)||(585867-585940)
chr5 (57-98)||(6887263-6887304)
chr5 (140-181)||(14534959-14535000)
chr5 (108-186)||(25961953-25962033)
[»] chr2 (51 HSPs)
chr2 (57-212)||(43474117-43474271)
chr2 (57-212)||(20561121-20561275)
chr2 (57-212)||(12704665-12704819)
chr2 (61-212)||(27095687-27095837)
chr2 (57-210)||(5754266-5754418)
chr2 (57-212)||(25067830-25067984)
chr2 (61-212)||(44942267-44942417)
chr2 (57-212)||(11937847-11938002)
chr2 (57-212)||(9978658-9978812)
chr2 (57-212)||(22597113-22597267)
chr2 (57-209)||(38535297-38535448)
chr2 (61-212)||(33012059-33012209)
chr2 (64-212)||(35333490-35333637)
chr2 (57-212)||(7072937-7073091)
chr2 (57-212)||(31908805-31908959)
chr2 (57-212)||(36867986-36868140)
chr2 (57-212)||(15919852-15920005)
chr2 (58-212)||(13740649-13740801)
chr2 (67-212)||(34470952-34471098)
chr2 (61-212)||(28261877-28262032)
chr2 (57-212)||(17268115-17268267)
chr2 (57-212)||(18089385-18089535)
chr2 (57-181)||(9689993-9690116)
chr2 (61-212)||(4604296-4604446)
chr2 (58-212)||(4739310-4739461)
chr2 (57-212)||(34416751-34416904)
chr2 (70-208)||(10286999-10287135)
chr2 (57-212)||(13878996-13879157)
chr2 (57-212)||(14019121-14019282)
chr2 (57-212)||(32015198-32015355)
chr2 (100-209)||(28231089-28231198)
chr2 (134-212)||(41797648-41797726)
chr2 (100-212)||(32314462-32314574)
chr2 (67-212)||(4732059-4732202)
chr2 (57-212)||(34963065-34963208)
chr2 (100-212)||(4426647-4426759)
chr2 (135-212)||(12891108-12891185)
chr2 (57-162)||(38384481-38384585)
chr2 (61-186)||(17767566-17767690)
chr2 (57-98)||(12891191-12891232)
chr2 (169-212)||(29542881-29542924)
chr2 (63-180)||(11798537-11798653)
chr2 (139-209)||(17116394-17116464)
chr2 (106-186)||(6431402-6431483)
chr2 (139-184)||(17792533-17792578)
chr2 (61-98)||(28231200-28231237)
chr2 (57-113)||(41797593-41797648)
chr2 (139-181)||(20607332-20607374)
chr2 (139-188)||(11581141-11581190)
chr2 (160-212)||(823947-823999)
chr2 (167-211)||(17926279-17926323)
[»] chr8 (39 HSPs)
chr8 (57-210)||(37612631-37612783)
chr8 (61-212)||(10338819-10338969)
chr8 (57-212)||(14600695-14600849)
chr8 (57-212)||(30026877-30027031)
chr8 (61-212)||(2234467-2234617)
chr8 (57-212)||(24791165-24791319)
chr8 (57-212)||(31407745-31407899)
chr8 (57-212)||(39067686-39067840)
chr8 (59-212)||(41361712-41361864)
chr8 (57-212)||(31308120-31308280)
chr8 (62-200)||(9501572-9501710)
chr8 (61-212)||(31202440-31202590)
chr8 (64-212)||(3204753-3204899)
chr8 (57-212)||(10147924-10148079)
chr8 (61-212)||(12329608-12329759)
chr8 (100-212)||(37128483-37128595)
chr8 (57-212)||(2025206-2025360)
chr8 (57-198)||(1810231-1810370)
chr8 (64-212)||(1039891-1040037)
chr8 (57-188)||(11161860-11161990)
chr8 (61-209)||(24699812-24699961)
chr8 (126-212)||(7579852-7579938)
chr8 (57-193)||(23971112-23971245)
chr8 (63-207)||(30039339-30039476)
chr8 (57-182)||(13570753-13570877)
chr8 (80-184)||(15288823-15288926)
chr8 (80-184)||(15469192-15469295)
chr8 (116-212)||(22787528-22787624)
chr8 (106-209)||(4757191-4757294)
chr8 (63-212)||(2968513-2968664)
chr8 (64-212)||(10334159-10334307)
chr8 (57-122)||(7583851-7583915)
chr8 (86-193)||(28297122-28297230)
chr8 (64-212)||(7281631-7281780)
chr8 (57-124)||(13576261-13576326)
chr8 (96-186)||(32778973-32779064)
chr8 (65-98)||(7583967-7584000)
chr8 (157-209)||(7270067-7270119)
chr8 (62-90)||(25939765-25939793)
[»] chr6 (26 HSPs)
chr6 (57-212)||(15590068-15590222)
chr6 (57-212)||(12481359-12481513)
chr6 (57-212)||(14783160-14783314)
chr6 (57-212)||(21507797-21507951)
chr6 (57-197)||(6419862-6420001)
chr6 (57-212)||(23654228-23654382)
chr6 (58-212)||(19402797-19402950)
chr6 (61-211)||(31937410-31937557)
chr6 (57-209)||(2304802-2304953)
chr6 (57-212)||(8693646-8693803)
chr6 (59-212)||(4921870-4922023)
chr6 (86-212)||(4393777-4393902)
chr6 (58-186)||(35219920-35220045)
chr6 (57-212)||(6296238-6296395)
chr6 (57-212)||(6303048-6303205)
chr6 (108-212)||(23638107-23638211)
chr6 (138-212)||(31705223-31705297)
chr6 (57-122)||(4084996-4085060)
chr6 (135-200)||(29927095-29927160)
chr6 (63-131)||(29927449-29927516)
chr6 (167-212)||(29284839-29284884)
chr6 (138-188)||(31801243-31801293)
chr6 (139-188)||(8508202-8508251)
chr6 (142-191)||(20028708-20028757)
chr6 (167-208)||(27135200-27135241)
chr6 (121-173)||(15057722-15057774)
[»] chr3 (47 HSPs)
chr3 (57-212)||(11819061-11819215)
chr3 (61-212)||(31270308-31270458)
chr3 (57-212)||(31462743-31462897)
chr3 (57-212)||(36691796-36691950)
chr3 (57-209)||(53155430-53155581)
chr3 (61-212)||(32080751-32080901)
chr3 (59-212)||(35174684-35174836)
chr3 (57-212)||(14585440-14585594)
chr3 (57-212)||(48652437-48652591)
chr3 (57-204)||(3456921-3457067)
chr3 (57-212)||(13701969-13702123)
chr3 (57-212)||(30156278-30156432)
chr3 (57-188)||(34960879-34961009)
chr3 (75-212)||(22484961-22485097)
chr3 (57-200)||(36624703-36624845)
chr3 (62-212)||(40013269-40013421)
chr3 (59-212)||(54239015-54239167)
chr3 (57-188)||(49628108-49628239)
chr3 (57-212)||(38527241-38527395)
chr3 (57-188)||(48400877-48401007)
chr3 (57-212)||(55090580-55090734)
chr3 (57-212)||(39610182-39610344)
chr3 (57-198)||(4206522-4206662)
chr3 (61-212)||(41868291-41868442)
chr3 (61-212)||(19645203-19645353)
chr3 (59-200)||(40883877-40884018)
chr3 (57-212)||(1074891-1075044)
chr3 (62-208)||(24483679-24483824)
chr3 (57-212)||(106032-106187)
chr3 (57-188)||(27189414-27189545)
chr3 (57-212)||(19861276-19861428)
chr3 (126-208)||(34103718-34103800)
chr3 (63-212)||(53402614-53402753)
chr3 (100-212)||(33637423-33637535)
chr3 (110-212)||(2147756-2147859)
chr3 (136-212)||(55454922-55454998)
chr3 (96-172)||(4817867-4817943)
chr3 (71-209)||(39429499-39429637)
chr3 (126-217)||(3312489-3312580)
chr3 (157-212)||(24520714-24520769)
chr3 (139-188)||(4219239-4219288)
chr3 (167-212)||(40716277-40716322)
chr3 (62-113)||(48854889-48854939)
chr3 (142-212)||(3961760-3961830)
chr3 (58-96)||(54706777-54706815)
chr3 (57-90)||(4019590-4019623)
chr3 (167-211)||(40702536-40702580)
[»] chr7 (50 HSPs)
chr7 (59-212)||(9785297-9785449)
chr7 (61-212)||(28664901-28665051)
chr7 (57-212)||(36579301-36579455)
chr7 (57-212)||(11832996-11833151)
chr7 (57-212)||(45457545-45457699)
chr7 (57-212)||(46026018-46026172)
chr7 (61-212)||(10574363-10574513)
chr7 (57-212)||(42603758-42603912)
chr7 (60-212)||(17473712-17473863)
chr7 (60-212)||(17579351-17579502)
chr7 (57-212)||(21990639-21990794)
chr7 (61-212)||(1281126-1281276)
chr7 (61-212)||(39532964-39533114)
chr7 (59-209)||(5684345-5684494)
chr7 (59-209)||(5709395-5709544)
chr7 (57-212)||(48304382-48304538)
chr7 (61-212)||(32740734-32740885)
chr7 (57-212)||(45482042-45482196)
chr7 (59-212)||(22747497-22747648)
chr7 (100-212)||(10094461-10094573)
chr7 (57-212)||(17509193-17509346)
chr7 (57-212)||(17543868-17544021)
chr7 (57-212)||(21603441-21603592)
chr7 (57-212)||(6667373-6667527)
chr7 (57-212)||(41287935-41288090)
chr7 (73-212)||(2622586-2622724)
chr7 (57-212)||(42644654-42644804)
chr7 (101-212)||(15674601-15674712)
chr7 (57-209)||(27535434-27535587)
chr7 (57-212)||(3266360-3266520)
chr7 (96-212)||(43847086-43847202)
chr7 (66-212)||(24320212-24320357)
chr7 (61-212)||(36719541-36719680)
chr7 (108-212)||(32643040-32643144)
chr7 (65-212)||(9719962-9720103)
chr7 (138-212)||(26161038-26161112)
chr7 (61-212)||(21954807-21954957)
chr7 (66-212)||(4621356-4621501)
chr7 (107-212)||(14657810-14657917)
chr7 (57-117)||(40761567-40761626)
chr7 (61-212)||(37376020-37376175)
chr7 (61-188)||(39707272-39707398)
chr7 (156-212)||(15017365-15017421)
chr7 (57-113)||(24988443-24988497)
chr7 (169-209)||(36253019-36253059)
chr7 (111-205)||(17223134-17223229)
chr7 (167-206)||(43998940-43998979)
chr7 (142-212)||(33476641-33476711)
chr7 (135-165)||(40761666-40761696)
chr7 (57-90)||(15674735-15674768)
[»] scaffold1379 (2 HSPs)
scaffold1379 (57-212)||(1075-1229)
scaffold1379 (106-212)||(1-107)
[»] scaffold0056 (1 HSPs)
scaffold0056 (57-212)||(74142-74296)
[»] scaffold0536 (1 HSPs)
scaffold0536 (57-212)||(2878-3034)
[»] scaffold0321 (1 HSPs)
scaffold0321 (69-212)||(7113-7255)
[»] scaffold0294 (1 HSPs)
scaffold0294 (64-212)||(4056-4202)
[»] scaffold0001 (1 HSPs)
scaffold0001 (57-212)||(404247-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (59-212)||(2407-2557)
[»] scaffold0121 (1 HSPs)
scaffold0121 (57-212)||(13234-13392)
[»] scaffold0155 (1 HSPs)
scaffold0155 (62-212)||(35065-35216)
[»] scaffold1350 (1 HSPs)
scaffold1350 (57-208)||(1553-1702)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 33487173 - 33487019
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| |    
T  33487173 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgaattgtttttccttctatcctaattgaatatgtgatttcatatattttatgct 33487075  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  33487074 ttctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtttgttttgat 33487019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 424434 - 424280
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  424434 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 424336  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||| | |||||||||||    
T  424335 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgat 424280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 32784088 - 32784240
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||    
T  32784088 aggggtgatttagggtcaattttgacccaaaaatcacccc-tccgaattgtttttccttctatccttattgaataagtgatttcacatattttctgtttt 32784186  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| || |||||||||||||||||||||| ||||||||| | ||| |||||||    
T  32784187 cttttgtttgtttttgtgatttcgtcgtctctgaacgactatgtttcttttgat 32784240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 28678273 - 28678119
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||| | |||||| | ||||||||||||||||||| ||    
T  28678273 agaggggtgatttagggtcaattttgacccaaaaatcactcg-tccgaattgtttttcgttctatcataattgaataagtgatttcacatattttatatt 28678175  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  28678174 ttctttcgtttgtttttgtgatttcgtcgtatttgaacgactctgtttgttttgat 28678119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 3232770 - 3232920
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| |||||| |  |||||||||||||||| ||||||||    
T  3232770 gggtgatttagggtcaattttgatcaaaaaatcacccc-tccgaattgtttttccttctatcctaattgaataaatgatttcacatattttctgttttct 3232868  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||| | ||||||||||| |||||||||||    
T  3232869 ttcgtttgtttttgtgatttcgtcgtttctgaacgactctgtttgttttgat 3232920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 12871599 - 12871753
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||| || ||| | |||||||||||||||||  |||    
T  12871599 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgagttgtttttcattatatcctaatcgaataagtgatttcacatattttcagtt 12871697  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||    
T  12871698 ttctttcgtttgtttttgtgatttcgtcgtctttgcacgactctgtttgttttgat 12871753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 7995703 - 7995549
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  7995703 agaggggtgatttagggtcaattttgacccaaaaatcacctc-tccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 7995605  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| | | | |||||||||| ||||||||| |||| |||||| |||||||||||    
T  7995604 ttcttccttttttttttgtgatatcgtcgtctctgaatgactctgtttgttttgat 7995549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 14265266 - 14265416
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||||||||||||||||  |||||||||||| |||||  |||||||||||||||||| ||| || | ||||||||||||||||| ||||||||    
T  14265266 gggtgatttagggtcaattttgacaaaaaaatcacccc-tccgagctgtttttccttctatcctaattaaataagtgatttcacatattttctgttttct 14265364  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14265365 tacgtatgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 14265416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 29205267 - 29205417
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| | |||||| | ||||||||| ||||||| ||||||||    
T  29205267 gggtgatttagggtcaattttgacccaaaaatcaccccttg-gaattgtttttccttctatcataattgaataagtgatttcatatattttctgttttct 29205365  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || || |||||||||||||||||||||| ||||||||||| |||||||||||    
T  29205366 tttgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 29205417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 198
Target Start/End: Original strand, 27534677 - 27534817
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| | | |||||| | ||||||||||||||||| ||||    
T  27534677 agagggatgatttagggtcaattttgacccaaaaatcatccc-tccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 27534775  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgact 198  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  27534776 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgact 27534817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 42490871 - 42491025
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||| | |||||| | |||||||||||||| ||  |||    
T  42490871 agagaggtgatttagggtcaagtttgacctaaaaatcacccc-tccgaattgtttttcgttctatcttaattgaataagtgatttcacatatcttcagtt 42490969  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||    
T  42490970 ttctttcgtttgtttttgtgatttcgtcgtctctgtacgactctgtttgttttgat 42491025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 18343592 - 18343745
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||||||| | | ||| ||   ||||||||||||||||| ||||    
T  18343592 agaggggtgatttaggatcaattttgacccaaaaatcaccccttc-gatttgtttttccttctaccttaattaaatgagtgatttcacatattttctgtt 18343690  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |||||| ||||    
T  18343691 ttctttcgtttgtttttgtgatttcgt-gtctttgaacgactctgtttgttctgat 18343745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 4882494 - 4882348
Alignment:
Q  65 gatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcg 164  Q
    ||||||| |||||||| ||||||||||||||||| ||||| ||||||||| || |||||| |||||| | ||||||||||||||||| ||||||||||||    
T  4882494 gatttagagtcaatttcgacccaaaaatcacccc-tccgatttgtttttcattatatcctaattgaataagtgatttcacatattttctgttttctttcg 4882396  T
Q  165 tatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | |||||||||||||||||||||| | |||||||   |||||||||||    
T  4882395 tttgtttttgtgatttcgtcgtctcttaacgacttcgtttgttttgat 4882348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 13488675 - 13488525
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||| | | | |||||| | ||||||| ||||||||| | ||||||    
T  13488675 gggtgatttagggtcgattttgacccaaaaatcaccca-tccgatttgtttttccttccaccttaattgaataagtgattttacatattttctattttct 13488577  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||| ||||| ||||||||||| |||||||||||    
T  13488576 ttcgtttgtttttgtgatttcgccgtctctgaacgactctgtttgttttgat 13488525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 20411555 - 20411705
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||||||| || ||| |  |||||| | ||||||||||||||||| ||||||||    
T  20411555 gggtgatttatggtcaattttgacccaaaaatcaccca-tccgaattgtttttctttttattcaaattgaataagtgatttcacatattttctgttttct 20411653  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||| |||||| |||||| | ||||||||| |||||||||||    
T  20411654 ttcgtttgtttttgggatttcatcgtctctaaacgactctgtttgttttgat 20411705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 45750456 - 45750610
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||| |   ||||| |  ||||||||| |||||| |||||| | || ||||||||||||||  |||    
T  45750456 agaggggtgatttaaggtcaattttgacccaaaaatcatcaa-tccgattgttttttccttttatcctaattgaataagttatttcacatatttttggtt 45750554  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  45750555 ttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgat 45750610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 37822471 - 37822336
Alignment:
Q  74 tcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgttttt 173  Q
    ||||||||||||||||||| ||||  || |||||||||||||||||||||| |||||| | ||||||||||||||||| | ||||||||| | |||||||    
T  37822471 tcaattttgacccaaaaattaccct-tctgaattgtttttccttctatcctaattgaataagtgatttcacatattttctattttctttcatttgttttt 37822373  T
Q  174 gtgatttcgtcgtctttgaacgactctatttgttttg 210  Q
    ||||||||||||||| ||||||||| | |||||||||    
T  37822372 gtgatttcgtcgtctctgaacgactttgtttgttttg 37822336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 44517167 - 44517279
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||||||    
T  44517167 tccgaattgtttttccttctatcctaattcaataagtgatttcacatattttctgctttctttcgtttgtttttgtgatttcgtcgtctctgaacgactc 44517266  T
Q  200 tatttgttttgat 212  Q
    | |||||||||||    
T  44517267 tgtttgttttgat 44517279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 45193769 - 45193615
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt-ccttctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    ||||||| ||||||||||||||||| |||||| |||   ||||||||| |||||||| ||||||||||| |||||| | |||||||||||||||||  ||    
T  45193769 agaggggcgatttagggtcaattttaacccaataata--cccctccgagttgttttttccttctatcctaattgaataagtgatttcacatattttccgt 45193672  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||||||| |||||||||||||| ||||||||| | | |||||||||||||||||    
T  45193671 ttcctttcgtttgtttttgtgattttgtcgtctttaatctactctatttgttttgat 45193615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 51418040 - 51418145
Alignment:
Q  106 ttgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttg 205  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||    
T  51418040 ttgtttttccttctatcctaattgaaaa-gtgatttcacatattttctgttttctttcgtttgtttttgtaatttcgtcgtctctgaacgactctgtttg 51418138  T
Q  206 ttttgat 212  Q
    |||||||    
T  51418139 ttttgat 51418145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 33939145 - 33939002
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacata--ttttatg 154  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||             |||||||||||||  |||| ||    
T  33939145 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tctgaattgtttttctttctat-------------gtgatttcacataaattttctg 33939060  T
Q  155 ttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  33939059 ttttctttcgtttgtttttgtgatttcgtcatctctgaacgactctgtttgttttgat 33939002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 10627017 - 10627129
Alignment:
Q  97 ccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacga 196  Q
    |||||||| ||||||||| || |||||| |||||| | || |||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||    
T  10627017 ccctccgagttgtttttctttatatcctaattgaataagtaatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaatga 10627116  T
Q  197 ctctatttgtttt 209  Q
    |||| ||||||||    
T  10627117 ctctgtttgtttt 10627129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 17347584 - 17347729
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttc 163  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||| |||||||| | |  ||| | |||||||||||| |||| |||||||||||    
T  17347584 tgatttagggtcaattttgacc-aaaaatcaccca-tccgagttgttttttcttctatcataaaggaataagtgatttcacatcttttctgttttctttc 17347681  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     | |||||||||||||||||||||| || |||||||| |||||||||||    
T  17347682 tt-tgtttttgtgatttcgtcgtctctgcacgactctctttgttttgat 17347729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 42276335 - 42276487
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||| | ||||||| ||||| ||||||| |||||||||||||| |||||||| | ||| || |  ||||||||||||||||  |||    
T  42276335 agaggggtgatttagggttatttttgacacaaaa-tcacccc-tccgaattgttttttcttctatcataattaaataactgatttcacatattttcagtt 42276432  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||  ||||||||| |||||||| ||||||||||| |||||||||||    
T  42276433 ttctttcgtttg-atttgtgattacgtcgtctctgaacgactctgtttgttttgat 42276487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 29726690 - 29726585
Alignment:
Q  107 tgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgt 206  Q
    ||||||||||| |||||| || ||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||  | |||||||  |||||    
T  29726690 tgtttttccttatatcctaatcgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctccgcacgactcggtttgt 29726591  T
Q  207 tttgat 212  Q
    ||||||    
T  29726590 tttgat 29726585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 15791341 - 15791264
Alignment:
Q  135 gtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  15791341 gtgatttaacatattttctgttttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgat 15791264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 4871165 - 4871046
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| | ||||||||||| || |||||||| | |||||||||||||||||| ||| || |||||| | || |||||||||||||| | |||| |    
T  4871165 gggtgatttaagatcaattttgactcataaatcaccac-tccgaattgtttttccttttattctaattgaataagttatttcacatattttctatttttt 4871067  T
Q  161 ttcgtatgtttttgtgatttc 181  Q
    | ||| |||||||||||||||    
T  4871066 tccgtttgtttttgtgatttc 4871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 9298552 - 9298434
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttttc 159  Q
    ||||||||||||||||||||||| |||||  ||||||  ||||| |||||||||||||||||||  || || |  ||||||| || ||||||| ||||||    
T  9298552 gggtgatttagggtcaattttgaaccaaag-tcaccc--tccgagttgtttttccttctatcctagttaaataattgatttccacgtattttaagttttc 9298456  T
Q  160 tttcgtatgtttttgtgatttc 181  Q
    |||||| |||||||||||||||    
T  9298455 tttcgtttgtttttgtgatttc 9298434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 15391327 - 15391241
Alignment:
Q  126 attgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||||||||||||| || ||||||   |||||||||||    
T  15391327 attgaataagtgatttcacatgttttctgttttctttcgtttgtttttgtgatttcgtcgtctctggacgacttcgtttgttttgat 15391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 32878690 - 32878840
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||| ||||||||||||||| ||| ||  ||||| |||||||||| |||||||| ||| || | ||| |||||||||||| |  ||||||    
T  32878690 gggtgatttagggttaattttgacccaaaa-tcatcct-tccgagttgtttttccctctatcctaattaaataagtg-tttcacatatttcaa-ttttct 32878785  T
Q  161 ttcgtatgtttttgt---gatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| ||||||| |   |||||||||||| ||| |||||| |||||||||||||    
T  32878786 ttcgtttgttttttttttgatttcgtcgtcattgcacgactttatttgttttgat 32878840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 33125943 - 33125794
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttttct 160  Q
    ||||||||||||||||||||||||||||| |||| |  ||  |||||||||||||||| |  | |||||| | |||||||| ||||| |||  || ||||    
T  33125943 ggtgatttagggtcaattttgacccaaaa-tcactca-tctaaattgtttttccttcttttataattgaataagtgatttccacataattttagtattct 33125846  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||  | ||||||||||||||||| |||| || || ||||| |||||||||||    
T  33125845 tttctttgtttttgtgatttcgttgtctctgcacaactctgtttgttttgat 33125794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 28399383 - 28399336
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgt 186  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||    
T  28399383 tttcacatatttttagttttctttcgtttgtttttgtgatttcgtcgt 28399336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 2513633 - 2513592
Alignment:
Q  171 tttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  2513633 tttgtgatttcgtcgtcttttcacgactctatttgttttgat 2513592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 29069883 - 29069831
Alignment:
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| ||||||| ||||||||||||||||  |||||||| |||||||||||    
T  29069883 tttcgtttgtttttatgatttcgtcgtctttacacgactctgtttgttttgat 29069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 25689887 - 25689832
Alignment:
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||| | |||||||||| | |||||| |||||||||||    
T  25689887 ttctttcgtttgtttttgtgatgttgtcgtctttgcatgactctgtttgttttgat 25689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 25689982 - 25689932
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttt 112  Q
    |||| |||||||||||||||||| || |||||||||| ||||||||||||||    
T  25689982 gggttatttagggtcaattttga-cctaaaatcaccctctccgaattgtttt 25689932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 22032216 - 22032174
Alignment:
Q  57 agaggggtgatttagggtcaatttt-gacccaaaaatcacccc 98  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  22032216 agagggatgatttagggtcaatttttgacccaaaaatcacccc 22032174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 50107961 - 50107927
Alignment:
Q  154 gttttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    |||||||||||| ||||||||||||||||||||||    
T  50107961 gttttctttcgtttgtttttgtgatttcgtcgtct 50107927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 8937612 - 8937641
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaa 90  Q
    ||||||||||||||||||||||||||||||    
T  8937612 gggtgatttagggtcaattttgacccaaaa 8937641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 13999025 - 13999098
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||  || || |||||| ||||||| ||||| |||| | |||| |||||||| |||||||||||    
T  13999025 tttcacatattttcagtattatttcgtttgtttttatgattacgtcatttttgtacgactctgtttgttttgat 13999098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 15791630 - 15791558
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaa 131  Q
    ||||| ||||||||| ||||||||||| ||||||||| | | ||||| |||||||||||| |||| | ||||||    
T  15791630 gagggctgatttaggatcaattttgacacaaaaatca-ctcatccgagttgtttttccttatatcttaattgaa 15791558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 45425518 - 45425473
Alignment:
Q  155 ttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactct 200  Q
    |||||||||||  |||||||||||||||||||||| | ||||||||    
T  45425518 ttttctttcgttagtttttgtgatttcgtcgtcttagcacgactct 45425473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 47551177 - 47551227
Alignment:
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| |||||||||||||||||||||| || |||||||  |||||||||||    
T  47551177 tttcgtttgtttttgtgatttcgtcgtctctgcacgactc--tttgttttgat 47551227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 7060302 - 7060456
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  7060302 agaggggtaatttagggtcaattttaacccaaaaatcacccc-tccgaattgtttttccttctatcctaattgaataagtgatttcacatattttatgtt 7060400  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  7060401 ttctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtttcttttgat 7060456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 22757072 - 22757226
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  22757072 agaggggtgatttagggtcaattttgactcaaaaatcaccac-tccgaattgtttttccttctatcctaattgaataagtgatttcacatattttatgtt 22757170  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  22757171 ttttttcgtttgtttttgtgatttcgtcgtctatgaacgactctgtttgttttgat 22757226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 13965545 - 13965692
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttc 163  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| | ||||||||||||||| |||||||||||||    
T  13965545 tgatttagggtcaattttgacccaaaaatcaccccttc-gaattgtttttccttctatcctaattgaataagtgatttcacatattctatgttttctttc 13965643  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||||||||||||||||||| |||||||||||  ||||||||||    
T  13965644 gtttgtttttgtgatttcgtcgtctctgaacgactctgattgttttgat 13965692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 43244524 - 43244373
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| | |||||||||||||||||   ||    
T  43244524 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tctgaattgtttttccttctatcctaattgaataagtgatttcacatattttcgatt 43244426  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||    
T  43244425 ttctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgtttt 43244373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 24825627 - 24825781
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||| |||||||||||| ||||||||| || ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| | ||    
T  24825627 agaggggtgatttaggatcaattttgacctaaaaatcactcc-tccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctatt 24825725  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||    
T  24825726 ttctttcgtttgtttttgtgatttcgtcgtctttgcacgactctgtttgttttgat 24825781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 29268920 - 29268766
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||||||||| |||||| |||||| | ||||||||||||||||| ||||    
T  29268920 agaggggtgatttaaggtcaattttgaccctaaaatcacccc-tccgagttgtttttccttttatcctaattgaataagtgatttcacatattttctgtt 29268822  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  29268821 ttctttcgtttgtttttgtgatttcgtcgtctctgaacaactctgtttgttttgat 29268766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 58 - 212
Target Start/End: Complemental strand, 394416 - 394263
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttt 157  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || | |||||||||||| |||| || ||    
T  394416 gaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgaattgtttttccttctatcctaattcaataagtgatttcacatcttttctgctt 394318  T
Q  158 tctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||| ||||| | |||||||||||||| ||||||||||| |||||||||||    
T  394317 tctttcgtttgtttctatgatttcgtcgtctctgaacgactctgtttgttttgat 394263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 25658145 - 25658299
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||| ||||||||| ||||||||||| | ||| |||||||||||||||| |||| ||| || | ||||||||||||||||| ||||    
T  25658145 agaggggtgatttagggttaattttgactcaaaaatcacctc-tccaaattgtttttccttctttcctaatttaataagtgatttcacatattttctgtt 25658243  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  25658244 ttctttcgtatgtttttgtgatttcgtcgtctctgaacgactttgtttgttttgat 25658299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 8712510 - 8712662
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||  ||||  | ||||||||||||||||| ||||||    
T  8712510 aggggtgatttagggtcaattttgacccaaaaatcacccc-tcataattgtttttccttctatcctagttgagtaagtgatttcacatattttttgtttt 8712608  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| |||||||||||||||||| ||| |||| |||||| |||||||||||    
T  8712609 ctttcgtttgtttttgtgatttcgtcatctctgaatgactctgtttgttttgat 8712662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 6911658 - 6911812
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||||||| | | |||||| | ||||||||||||||||| ||||    
T  6911658 agaggggtgatttagggtcaattttgatccaaaaatcacctc-tccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 6911756  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||| |||||||||||    
T  6911757 ttctttcgtttgtttttgtgatttcttcgtctctaaacgactctgtttgttttgat 6911812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 26742602 - 26742452
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||| | |||||| | ||||||||||||||||| ||||||||    
T  26742602 gggtgatttaggatcaattttgacccaaaaatcaccca-tccgaattgtttttctttctatcttaattgaataagtgatttcacatattttctgttttct 26742504  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||| ||||||| ||||||||||||||||||| | |||||||||    
T  26742503 ttcgtttgttttcgtgattttgtcgtctttgaacgactctgtatgttttgat 26742452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 30202016 - 30202170
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||  | |||||||||||| |||| | |||||| | ||||||||||||||||| ||||    
T  30202016 agaggggtgatttaaggtcaattttgatccaaaaatcaccccttct-agttgtttttccttttatcttaattgaataagtgatttcacatattttctgtt 30202114  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  30202115 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 30202170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 44757185 - 44757031
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||||||  || || ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  44757185 agaggggtgatttaaggtcaattttgacccaaaaatcacccattc-gagttgtttttccttctatcctaattgaataagtgatttcacatattttatgtt 44757087  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||| |||||||||||||| || | |||| | |||||||||||    
T  44757086 ttctttcgtttgtttttatgatttcgtcgtctctgcatgactttgtttgttttgat 44757031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 7083950 - 7083805
Alignment:
Q  66 atttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgt 165  Q
    |||||||||||||||||| |||||||||||||| |  |||||||||||||||||||| | |||||| | ||||||||||||||||| | |||||||||||    
T  7083950 atttagggtcaattttgatccaaaaatcacccc-tatgaattgtttttccttctatcataattgaataagtgatttcacatattttctattttctttcgt 7083852  T
Q  166 atgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     |||||||||||||||||||||| ||||||||||| |||||||||||    
T  7083851 ttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 7083805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 27394810 - 27394962
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||| | || |||| | ||||||||||||||    
T  27394810 aggggtgatttagggtcaattttgacccaaaaatcaccct-tccggattatttttccttctatcctaattgaataagtaatttaaaatattttatgtttt 27394908  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| |||||||||||||||||||||| ||||||||| |  ||||||||||    
T  27394909 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactttgattgttttgat 27394962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 11210456 - 11210302
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||||| |||||||| | ||| | |||||| | ||||||||||||||||  | ||    
T  11210456 agaggggtgatttagggtcaattttgccctaaaaatcacccc-tccgaattatttttcctcccatcataattgaataagtgatttcacatatttactctt 11210358  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  11210357 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 11210302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 20400038 - 20399892
Alignment:
Q  65 gatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcg 164  Q
    ||||||||||||||||||||||||||||||||| | |||||||| |||| |||||||||| |||||| | ||||||||| ||||||| ||||||||||||    
T  20400038 gatttagggtcaattttgacccaaaaatcacccac-ccgaattgctttttcttctatcctaattgaataagtgatttcatatattttctgttttctttcg 20399940  T
Q  165 tatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | | |||||||||||||||||||| |||||||||||  ||||||||||    
T  20399939 tttatttttgtgatttcgtcgtctctgaacgactcttcttgttttgat 20399892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 24568856 - 24568702
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||| |||||| | ||||||| ||||||| | ||||    
T  24568856 agaggggtgatttagggtgaattttgacccaaaaatcaccct-tccgaattatttttccttctatcctaattgaataagtgattttacatattatctgtt 24568758  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||| |||||||||||||||||||| | ||||||||||  |||||||||||    
T  24568757 ttatttcgtttgtttttgtgatttcgtcgtatctgaacgactccgtttgttttgat 24568702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 26674354 - 26674504
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||| |||||||||||| |||||||||||| ||| ||||| ||||||||||||| | |||||| | ||||||||||||||||| ||||||||    
T  26674354 gggtgatttaggatcaattttgacctaaaaatcacccc-tccaaattgcttttccttctatcataattgaataagtgatttcacatattttttgttttct 26674452  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||| ||| ||||||||| | |||||||||||    
T  26674453 ttcgtttgtttttgtgatttcgtcatctctgaacgactttgtttgttttgat 26674504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 212
Target Start/End: Complemental strand, 38944278 - 38944137
Alignment:
Q  69 tagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatg 168  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |  ||||| | ||||||||||||||||| ||||||||||||| ||    
T  38944278 tagggtcaattttggcccaaaaatcacccc-tccaaattgtttttccttctatcgtagttgaataagtgatttcacatatttt-tgttttctttcgtttg 38944181  T
Q  169 tttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  38944180 tttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 38944137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 51152105 - 51152256
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| || | ||||||||||||||||| || |||    
T  51152105 aggggtgatttanggtcaatattgacccaaaaatcacccc-tccgaattgtttttccttctatcctaatttaataagtgatttcacatattttctgcttt 51152203  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| || ||||||||||||||| ||| ||||||||||  |||||||||||    
T  51152204 ctttcgtttg-ttttgtgatttcgtcatctctgaacgactccgtttgttttgat 51152256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 478154 - 478001
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||| |||||| |||||| | ||||||| ||||||||| ||||    
T  478154 agaggggtgatttatggtcaattttgacccaaaaatcacca--tccgaattgtttttccttatatcctaattgaataagtgattttacatattttctgtt 478057  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | ||||||| | |||||||||||||||  ||| ||||||||||| |||||||||||    
T  478056 tcctttcgtttatttttgtgatttcgttttctctgaacgactctgtttgttttgat 478001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 39837572 - 39837727
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttcc-ttctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    ||||||||||||||| |||||||||||||||||||||||||| || || || ||||||| || |||||| |||||| | ||||||||||||||||| |||    
T  39837572 agaggggtgatttagcgtcaattttgacccaaaaatcaccccttc-gatttttttttcccttttatcctaattgaataagtgatttcacatattttctgt 39837670  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||| ||||||| |||||||||| ||||||||||||| | |||||||||||    
T  39837671 tttctttcgtttgtttttttgatttcgtcatctttgaacgactttgtttgttttgat 39837727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 24100117 - 24100270
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttat--g 154  Q
    |||||||||||||||| |||||||||| |||||||| ||||  ||||||||||||||||||||||| | |||||| | ||||||||||||||||| |  |    
T  24100117 agaggggtgatttaggatcaattttgaaccaaaaattaccca-tccgaattgtttttccttctatcgtaattgaataagtgatttcacatattttctctg 24100215  T
Q  155 ttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||||| ||||||||    
T  24100216 ttttctttcgtttgtttttgcaatttcgtcgtctgtgaacgactctgtttgtttt 24100270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 5814330 - 5814479
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctt 161  Q
    |||||||||||||||||||||| |||||||||| ||| ||| | ||||||| ||||||||| | |||||| | || ||||||||||||||  ||||||||    
T  5814330 ggtgatttagggtcaattttgatccaaaaatcatccc-tccaagttgttttcccttctatcttaattgaataagttatttcacatatttttagttttctt 5814428  T
Q  162 tcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| |||||||||||||||||||||| || |||||||| |||||||||||    
T  5814429 tcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgat 5814479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 19745369 - 19745522
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||| |||||||||||||||||||||  |  |||||||||||||| ||| |||||| |||||| |  |||||||||||||||| ||||||    
T  19745369 aggggtgatttaggatcaattttgacccaaaaatcattca-tccgaattgtttttgcttttatcctaattgaataattgatttcacatattttctgtttt 19745467  T
Q  159 ctttcgtatg-tttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| || |||||||||||| ||||||| ||||||||||| |||||||||||    
T  19745468 ctttcgtttgttttttgtgatttagtcgtctctgaacgactctgtttgttttgat 19745522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 19794437 - 19794284
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||| |||||||||||||||||||||  |  |||||||||||||| ||| |||||| |||||| |  |||||||||||||||| ||||||    
T  19794437 aggggtgatttaggatcaattttgacccaaaaatcattca-tccgaattgtttttgcttttatcctaattgaataattgatttcacatattttctgtttt 19794339  T
Q  159 ctttcgtatg-tttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| || |||||||||||| ||||||| ||||||||||| |||||||||||    
T  19794338 ctttcgtttgttttttgtgatttagtcgtctctgaacgactctgtttgttttgat 19794284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 7861344 - 7861198
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||  ||||||||||||||||||||||| | || ||||| |||||||||||||||| ||| || | ||||||||||||||||| |||||| |    
T  7861344 gggtgatttagaatcaattttgacccaaaaatcaccac-tctgaattatttttccttctatcctaattaaataagtgatttcacatattttctgtttt-t 7861247  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||| | |||||||||||||||||||||| |||||||||||| |||||||    
T  7861246 ttcatttgtttttgtgatttcgtcgtctctgaacgactctacttgtttt 7861198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 43493392 - 43493276
Alignment:
Q  96 cccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacg 195  Q
    ||||||||||||||||||||||||||| | |||||| | ||||||||||||||||| |||||||||| || | |||||||||||||||||||| ||||||    
T  43493392 cccctccgaattgtttttccttctatcttaattgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttcgtcgtctctgaacg 43493293  T
Q  196 actctatttgttttgat 212  Q
    ||||| |||||||||||    
T  43493292 actctgtttgttttgat 43493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 45351205 - 45351059
Alignment:
Q  67 tttagggtcaattttgacccaaaaatcaccccctccgaattgttttt-ccttctatcctgatt-gaacatgtgatttcacatattttatgttttctttcg 164  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||| || ||| ||| | ||||||||||||||||| |||||| |||||    
T  45351205 tttagggtcaattttgatccaaaaatcacccc-tccgaattgttttttccttttattctaatttgaataagtgatttcacatattttctgttttgtttcg 45351107  T
Q  165 tatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  45351106 tttgtttttgtgatttcgtcgtctctgaacaactctgtttgttttgat 45351059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 45360684 - 45360538
Alignment:
Q  67 tttagggtcaattttgacccaaaaatcaccccctccgaattgttttt-ccttctatcctgatt-gaacatgtgatttcacatattttatgttttctttcg 164  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||| || ||| ||| | ||||||||||||||||| |||||| |||||    
T  45360684 tttagggtcaattttgatccaaaaatcacccc-tccgaattgttttttccttttattctaatttgaataagtgatttcacatattttctgttttgtttcg 45360586  T
Q  165 tatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  45360585 tttgtttttgtgatttcgtcgtctctgaacaactctgtttgttttgat 45360538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 50801235 - 50801349
Alignment:
Q  98 cctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgac 197  Q
    |||||||||| ||||||||| |||||| |||||| | ||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||||||||    
T  50801235 cctccgaattatttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtctctgaacgac 50801334  T
Q  198 tctatttgttttgat 212  Q
    ||| |||||||||||    
T  50801335 tctgtttgttttgat 50801349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 31521962 - 31522074
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||||| | ||||||    
T  31521962 aggggtgatttagggtcaattttgacctaaaaatcacccc-tccgaattgtttttccttctatcctaattgaataagtgatttcacatattctttgtttt 31522060  T
Q  159 ctttcgtatgtttt 172  Q
    |||| || ||||||    
T  31522061 ctttagtttgtttt 31522074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 29922812 - 29922969
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt---ccttctatcctgattgaacatgtgatttcacatattttat 153  Q
    |||| |||||||||||||||||||||||| || ||||||||| ||| | ||||||||   | ||||||||| |||||| | ||||||||||||||||| |    
T  29922812 agagaggtgatttagggtcaattttgacctaataatcacccc-tccaagttgttttttttctttctatcctaattgaataagtgatttcacatattttct 29922910  T
Q  154 gttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     ||| ||||||| |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  29922911 atttcctttcgtctgtttttgtgattttgtcgtctctgaacgactctgtttgttttgat 29922969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 626690 - 626538
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||  ||||||||||||||||||||||  || ||||| |||||| ||||||| | |||||| | |||||| |||||||||| ||||    
T  626690 agaggggtgatttagggctaattttgacccaaaaatcaccca-tctgaattatttttc-ttctatcataattgaataagtgatt-cacatattttctgtt 626594  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||  ||||||||||    
T  626593 ttctttcgtttgtttttgtgatttcgtcctctgtgaacgactctgattgttttgat 626538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 6881958 - 6882088
Alignment:
Q  81 tgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgattt 180  Q
    |||||||||||||||||| || || || |||||||||||||||| ||| || | ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6881958 tgacccaaaaatcaccccttc-gagttatttttccttctatcctaattaaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 6882056  T
Q  181 cgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||| |||||  |||| |||||||||||    
T  6882057 cgtcgtctctgaacatctctgtttgttttgat 6882088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 24611942 - 24611788
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||| ||||||||||||||||| ||  | |  |||| ||||||||||| |||||| | ||||||||||||||||| | ||    
T  24611942 agaggggtgatttatggtcaatttagacccaaaaatcacccc-tctaagtcattttcccttctatcctaattgaataagtgatttcacatattttctatt 24611844  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||| || ||||||||||||| ||||| ||||||||||| |||||||||||    
T  24611843 ttttttcgtttgcttttgtgatttcgacgtctctgaacgactctgtttgttttgat 24611788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 39523396 - 39523541
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||| ||||||||||||||||||||||          ||||||||||||| |||||| |||||| | |||||||||||| |||| ||||    
T  39523396 agaggggtgatttagagtcaattttgacccaaaaatca----------attgtttttccttttatcctaattgaataagtgatttcacatgttttctgtt 39523485  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||| |||||||||| ||| ||||| | |||||||||||||||    
T  39523486 ttctttcgtttgtttttatgatttcgtcatctctgaacaaatctatttgttttgat 39523541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 20887889 - 20887745
Alignment:
Q  66 atttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgt 165  Q
    ||||| ||||||||||||||||||||||||||  |||||||| || ||  ||||||| | ||| || | |||||||||||| |||| || ||||||||||    
T  20887889 atttaaggtcaattttgacccaaaaatcaccca-tccgaattattattttttctatcttaattcaataagtgatttcacat-ttttctgctttctttcgt 20887792  T
Q  166 atgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     |||||||||||||||||||||| ||||||||||| |||||||||||    
T  20887791 ttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 20887745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 2447816 - 2447932
Alignment:
Q  96 cccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacg 195  Q
    ||||| |||||| |||||  ||||||||| |||||| | ||||||||||||| ||||||||||| || || ||||||||||||||| |||||||||||||    
T  2447816 ccccttcgaattatttttttttctatcctaattgaataagtgatttcacataatttatgttttcattagtttgtttttgtgatttcttcgtctttgaacg 2447915  T
Q  196 actctatttgttttgat 212  Q
    ||||| |||||||||||    
T  2447916 actctgtttgttttgat 2447932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 12717255 - 12717106
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttttct 160  Q
    |||||||||| |||||||||||||||||| ||| ||  ||||| |||||||| |||||||||| ||| || | |||||||| |||||||||  |||||||    
T  12717255 ggtgatttagagtcaattttgacccaaaa-tcatccg-tccgacttgttttttcttctatcctaattaaataagtgatttccacatattttcagttttct 12717158  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| ||||||||||||||| ||||||  | ||||||||||||||||||||    
T  12717157 ttcgtttgtttttgtgatttcttcgtctcagcacgactctatttgttttgat 12717106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 42197533 - 42197686
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||| |||||||||  |||||||||    |||||||| |||||||||||||||| ||| || | |||| ||||| |||||| ||||||    
T  42197533 aggggtgatttagggttaattttgacaaaaaaatcactt--tccgaattatttttccttctatcctaatttaataagtgacttcacgtattttttgtttt 42197630  T
Q  159 cttt--cgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     |||  | | |||||||||||||||||||||| |||| |||||| |||||||||||    
T  42197631 ttttttcatttgtttttgtgatttcgtcgtctctgaatgactctgtttgttttgat 42197686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 8517545 - 8517445
Alignment:
Q  112 ttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttga 211  Q
    |||||||||| || |||||| | ||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||||| | ||||||||||    
T  8517545 ttccttctattctaattgaataagtgattttacatattttctgttttctttcgtttgtttttgtgatttcgccgtctctgaacgactttgtttgttttga 8517446  T
Q  212 t 212  Q
    |    
T  8517445 t 8517445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 13586370 - 13586229
Alignment:
Q  65 gatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttcttt-c 163  Q
    |||||| ||||||||||||| |||||||       ||| |||||||||| ||| |||| | |||||| | ||||||||||||||||| |||||| ||| |    
T  13586370 gatttatggtcaattttgactcaaaaat-------tccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtttttttttc 13586278  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  13586277 gtttgtttttgtgatttcgtcatctctgaacgactctgtttgttttgat 13586229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 22049543 - 22049393
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgattt-cacatattttatgttttc 159  Q
    |||||||||||||| ||||||||||||||| ||||||  || |||||||||||||||||||||| |||||| | ||||||| ||||||||||  ||||||    
T  22049543 gggtgatttagggttaattttgacccaaaa-tcaccctttc-gaattgtttttccttctatcctaattgaataagtgatttccacatattttcagttttc 22049446  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| | | ||||| || |||||| |||| || || ||| | |||||||||||    
T  22049445 tttcatttatttttatggtttcgttgtctctgcacaactgtgtttgttttgat 22049393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 36124471 - 36124351
Alignment:
Q  76 aattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgt 175  Q
    |||||||| ||||||||||| |  ||| ||||||||||||| ||||| | ||||||    ||||||||||||||||  |||||||||||| |||||||||    
T  36124471 aattttgatccaaaaatcactca-tcccaattgtttttcctcctatcttaattgaatgattgatttcacatatttt--gttttctttcgtttgtttttgt 36124375  T
Q  176 gatttcgtcgtctttgaacgactc 199  Q
    ||||||||||||| ||||||||||    
T  36124374 gatttcgtcgtctctgaacgactc 36124351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 28837128 - 28837197
Alignment:
Q  143 acatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||| || ||||| || |||||||||||    
T  28837128 acatattttctgttttttttcgtttgtttttgtgatttcgtcgtctctgcacgacgctgtttgttttgat 28837197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 7084184 - 7084276
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattt 150  Q
    |||||||||||||||| ||||||||||||||||||| |   | ||||| ||||||||||||||| | | |||||| | |||||| |||||||||    
T  7084184 agaggggtgatttaggttcaattttgacccaaaaatta-tgcttccgatttgtttttccttctaccttaattgaataagtgattgcacatattt 7084276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 32616889 - 32616827
Alignment:
Q  137 gatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    ||||||||||||||| |||||| |||||| | |||||||||||||||| ||| | ||||||||    
T  32616889 gatttcacatattttctgttttatttcgtttatttttgtgatttcgtcatctcttaacgactc 32616827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 35946032 - 35945980
Alignment:
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| ||||||||||||||||| ||||||| ||||||||  ||||||||||    
T  35946032 tttcgtttgtttttgtgatttcgttgtctttgtacgactcttcttgttttgat 35945980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 3159021 - 3159136
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtga-tttcacatattttatgt 155  Q
    |||||| |||||||||||||| ||| |||||||| ||||    ||||| ||||||||||||||||| | ||| || | |||| |||||||||||||  |     
T  3159021 agagggatgatttagggtcaacttttacccaaaa-tcactat-tccgagttgtttttccttctatcataattaaataagtgattttcacatattttcagc 3159118  T
Q  156 tttctttcgtatgttttt 173  Q
    |||||||||| |||||||    
T  3159119 tttctttcgtttgttttt 3159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 38431555 - 38431482
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||   | || |||||| || |||||||||||| || |||||| || |||||||||||||||||    
T  38431555 tttcacatattttcaatcttatttcgtttgcttttgtgatttcatcatctttgcacaactctatttgttttgat 38431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 28837055 - 28837119
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcct 124  Q
    |||| ||| ||||||| |||||||||||| |||||||| ||| ||||  |||||||||||||||||||    
T  28837055 agagaggtaatttaggatcaattttgaccaaaaaatca-cccatccg--ttgtttttccttctatcct 28837119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 6115 - 6269
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  6115 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 6213  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||| | |||||||||||    
T  6214 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgat 6269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 17331306 - 17331460
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||| | ||||||||||||||||| ||||    
T  17331306 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgatttgtttttccttctatcttaattgaataagtgatttcacatattttctgtt 17331404  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  17331405 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 17331460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 17699537 - 17699685
Alignment:
Q  63 gtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttcttt 162  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||||||    
T  17699537 gtgatttagggtcaattttgacccaaaaatcacccc-tccgaattgtttttccttctatcctaattgaataagtgatttcacatcttttctgttttcttt 17699635  T
Q  163 cgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| |||||||||||||||||||||| |||| |||| |||||||||||||    
T  17699636 cgtttgtttttgtgatttcgtcgtctctgaatgactatatttgttttgat 17699685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 29097769 - 29097921
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| | | |||||| | ||||||||||||||||| ||||||    
T  29097769 aggggtgatttagggtcaattttgacccaaagatcacccc-tccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtttt 29097867  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  29097868 ctttagtttgtttttgtgatttcgtcgtctttgaacgactctgtttgttttgat 29097921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 28040607 - 28040758
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||| |||||| |||||| | ||||||||||||||||| ||||    
T  28040607 agaggggtgatttacggtcaattttgacccaaaaatcacccc-tccaaatcgtttttccttatatcctaattgaataagtgatttcacatattttctgtt 28040705  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  28040706 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgtttt 28040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 6635227 - 6635382
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||| | |||||| | ||||||||||||||||| ||||    
T  6635227 agagggatgatttagggccaattttgacccaaaaatcaccctctctgagttgtttttccttctatcataattgaataagtgatttcacatattttctgtt 6635326  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| || |||||||||||||||||||||| ||||||||||| |||||||||||    
T  6635327 ttctttagtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 6635382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 33164611 - 33164457
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||| |||||||||| || ||||||||||||||||||||| | | |||||| | ||||||||||||||||| ||||    
T  33164611 agaggggtgatttatggtcaattttgactcaaaaatcactcc-tccgaattgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 33164513  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  33164512 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 33164457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 32347858 - 32347703
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt-ccttctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| | ||||||||||||||||| |||    
T  32347858 agaggggtgatttagggtcaactttgacccaaaaatcacccc-tccgacttgttttttccttctatcctaattgaataagtgatttcacatattttctgt 32347760  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  32347759 tttatttcgtttgtttttgtgatttcgtcgtttctgaacgactctgttggttttgat 32347703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 34431045 - 34431192
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttc 163  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||| |||||||  | |||||| | ||||||||||||||||| |||||||||||    
T  34431045 tgatttagggtcaattttgacccaaaaatcacccattc-gaattgttttttcttctattttaattgaataagtgatttcacatattttctgttttctttc 34431143  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || || ||||||||||||||||||||||||||||||| |||||||||||    
T  34431144 gtttgattttgtgatttcgtcgtctttgaacgactctgtttgttttgat 34431192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 17096385 - 17096228
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt---ccttctatcctgattgaacatgtgatttcacatattttat 153  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||   ||||||||||| |||||| | ||||||||||||||||| |    
T  17096385 agaggggtgatttagggtcaattttgacccaataatcacccc-tcccagttgttttttttccttctatcctaattgaataagtgatttcacatattttct 17096287  T
Q  154 gttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| ||||||| |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  17096286 gtttcctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttttgat 17096228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 27241046 - 27241181
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| | ||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||||||    
T  27241046 gggtgatttatgatcaattttgacccaaaaatcacccc-tctgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttct 27241144  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgac 197  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  27241145 ttcgtttgtttttgtaatttcgtcgtctttgaacgac 27241181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 6281022 - 6281176
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||| || |||||| | ||||||| ||||||||| | ||    
T  6281022 agaggggtgatttatggtcaattttgacccaaaaatcacccc-tctgaattatttttccttctattctaattgaataagtgattttacatattttctatt 6281120  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| |  |||||||| |||||||||||    
T  6281121 ttctttcgtttgtttttgtgatttcgtcgtctctagacgactctgtttgttttgat 6281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 20483165 - 20483318
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgatt-gaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||| ||| || ||| ||| | ||||||||||||||||| ||||    
T  20483165 gaggggtgatttaggatcaattttgacccaaaaatcaccc--tccaaattgtttttccttttattctaatttgaataagtgatttcacatattttctgtt 20483262  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||| || |||||||||||||||||||||||||||| ||||| |||||||||||    
T  20483263 ttgttttgtttgtttttgtgatttcgtcgtctttgaacaactctgtttgttttgat 20483318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 12439771 - 12439623
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctt 161  Q
    ||||||||||||  |||||||||| |||||||||||  ||||||||||||||| |||||||||  ||||| | ||||||||| ||||||| |||||||||    
T  12439771 ggtgatttagggataattttgacctaaaaatcaccc--tccgaattgtttttcattctatcctagttgaataagtgatttcatatattttttgttttctt 12439674  T
Q  162 tcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| |||||||||||||||||||| |||||| |||||| |||||||||||    
T  12439673 tcgtttgtttttgtgatttcgtcgtttttgaatgactctgtttgttttgat 12439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 43493850 - 43493972
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||| || |||||| | ||||||||||||||||| ||||    
T  43493850 agaggggtgatttagggtcaattttgatccaaaaatcacctc-tccgaattgtttttccttctattctaattgaataagtgatttcacatattttttgtt 43493948  T
Q  157 ttctttcgtatgtttttgtgattt 180  Q
    ||||||||| ||||||||||||||    
T  43493949 ttctttcgtttgtttttgtgattt 43493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 178244 - 178093
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctt 161  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||| |||| ||||||| |||||| |||||| | |||||||||||||||||||||||||||    
T  178244 ggtgatttaaggtcaattttgactcaaaaatcacctc-tccgagttgtgtttccttatatcctaattgaataagtgatttcacatattttatgttttctt 178146  T
Q  162 tcgtatgtttttgtgatttcgtcgtcttt--gaacgactctatttgttttgat 212  Q
    |||| |||||||||||||||||||||| |  | |||||||| |||||||||||    
T  178145 tcgtttgtttttgtgatttcgtcgtctctgcgcacgactctgtttgttttgat 178093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 39179933 - 39179817
Alignment:
Q  96 cccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacg 195  Q
    |||||||||||| ||||||||||||| || |||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  39179933 cccctccgaattatttttccttctattctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacg 39179834  T
Q  196 actctatttgttttgat 212  Q
    ||||| |||||||||||    
T  39179833 actctgtttgttttgat 39179817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 3740336 - 3740489
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||| |||||||||||| ||||||||| ||||||||| ||  || |||||||||| ||||||||||| |||||| | ||||||||||||||||| ||||    
T  3740336 agaggtgtgatttagggttaattttgactcaaaaatcatcca-tctgaattgtttt-ccttctatcctaattgaataagtgatttcacatattttctgtt 3740433  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||| |||||||||||||||| | ||||||||| |||||||||||    
T  3740434 ttctttcgtttgtttgtgtgatttcgtcgtctctaaacgactctgtttgttttgat 3740489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 26295201 - 26295047
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| |||||| | ||||||| ||| ||||| | ||    
T  26295201 agagaggtgatttagggtcaattttgatccaaaaatcacccc-tccgaagtgtttttccttctatccttattgaataagtgatttaacaaattttctatt 26295103  T
Q  157 ttctttcgtatgttttt-gtgatttcgtcgtctttgaacgactctatttgttttga 211  Q
    ||||||| | ||||||| ||||  ||||||||| ||||||||||| ||||||||||    
T  26295102 ttctttcttttgtttttagtgagatcgtcgtctctgaacgactctgtttgttttga 26295047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 42609127 - 42609276
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctt 161  Q
    |||||||||||||||||||||||| ||||||||| |  |||||||||||||| |||||||||| |||||| | ||||||||||||||||| | |||||||    
T  42609127 ggtgatttagggtcaattttgacctaaaaatcactca-tccgaattgttttttcttctatcctaattgaataagtgatttcacatattttctattttctt 42609225  T
Q  162 tcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | || |||||||||||||| ||||||| ||||| ||| |  ||||||||||    
T  42609226 ttgtttgtttttgtgattttgtcgtctctgaacaactttgattgttttgat 42609276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 23882259 - 23882108
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||  ||||||||| |   ||| ||||||||||| ||||||||  |||||| | ||||||| ||||||||||| ||    
T  23882259 agaggggtgatttagggtcaattttgattcaaaaatcatcaa-tccaaattgtttttctttctatccaaattgaataagtgatttgacatattttatatt 23882161  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    |||| |||| |||||||||||||||||||||| |||||||| || ||||||||    
T  23882160 ttctatcgtttgtttttgtgatttcgtcgtctctgaacgaccctgtttgtttt 23882108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 7771949 - 7771810
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacata-ttttatgt 155  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||                |||||||||||| |||| |||    
T  7771949 agaggggtgatttagggtcaattttgacccaaaaatca-cccctccgaattgtttttccttct----------------tgatttcacatatttttttgt 7771867  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||    
T  7771866 tttctttcatttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 7771810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 42396641 - 42396501
Alignment:
Q  71 gggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtt 170  Q
    |||||||||||||||||||||||| |   || ||||| ||||| |||||||| | |||||| | | ||||||||||||||| ||||||||||| | ||||    
T  42396641 gggtcaattttgacccaaaaatcatcttttc-gaattattttttcttctatcttaattgaataagcgatttcacatattttttgttttctttcatttgtt 42396543  T
Q  171 tttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||||||| ||||||| ||| |||||||||||    
T  42396542 tttgtgatttcgtcgtctctgaacgaatctgtttgttttgat 42396501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 12891706 - 12891808
Alignment:
Q  110 ttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    |||||||| |||||| |||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| || |||||||| ||||| ||    
T  12891706 ttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgttgtctctgcacgactctgtttgtatt 12891805  T
Q  210 gat 212  Q
    |||    
T  12891806 gat 12891808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 981164 - 981017
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||| ||||||||||||||| |||| |||| ||||| ||||||||||||||||| | |||||||  |||||||||||||||| |||   |||    
T  981164 gggtgatttaggatcaattttgacccaataatcgcccc-tccgagttgtttttccttctatcataattgaacgagtgatttcacatatttaatg---tct 981069  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| | ||| |||| ||||| ||||||| ||||| ||||| | |||||||||    
T  981068 ttcatttgtatttgcgattttgtcgtctctgaaccactctgtatgttttgat 981017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 2555416 - 2555334
Alignment:
Q  135 gtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgatgtcca 217  Q
    |||||||||||| |||| ||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||| ||||    
T  2555416 gtgatttcacattttttttgttttctttcgtttgtttttatgatttcgtcgtctctgaacgactctgtttgttttgatttcca 2555334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 18653808 - 18653914
Alignment:
Q  106 ttgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttg 205  Q
    |||||||| ||| |||||| |||||| | ||||||||  ||||||| || |||||||||| |||||||||||||||||||||| || |||||||| ||||    
T  18653808 ttgttttttcttatatcctaattgaataagtgatttcgtatattttctgatttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttg 18653907  T
Q  206 ttttgat 212  Q
    |||||||    
T  18653908 ttttgat 18653914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 3079410 - 3079297
Alignment:
Q  96 cccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacg 195  Q
    ||||||||| |||||||||||| |||| | |||||| | ||||||| ||||||||| || ||| |||||| |||||||||||||| ||||||| ||||||    
T  3079410 cccctccgatttgtttttccttatatcataattgaataagtgatttaacatattttctgctttttttcgtttgtttttgtgattttgtcgtctctgaacg 3079311  T
Q  196 actctatttgtttt 209  Q
    ||| | ||||||||    
T  3079310 actttgtttgtttt 3079297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 17687225 - 17687337
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    ||||| ||||||||||||||||| | |||||| | || ||||||||||||||  ||||||||| || ||||||||||||||||| |||| || |||||||    
T  17687225 tccgagttgtttttccttctatcttaattgaataagttatttcacatattttcagttttcttttgtttgtttttgtgatttcgttgtctctgcacgactc 17687324  T
Q  200 tatttgttttgat 212  Q
    | ||| |||||||    
T  17687325 tgtttcttttgat 17687337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 39531540 - 39531422
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| ||||||||||||||| |||||||  |||||||| ||| ||||||||||||| | |||||| | ||||||||||||| ||| ||||||||    
T  39531540 gggtgatttaaggtcaattttgaccc-aaaatca-tccctccgagttg-ttttccttctatcgtaattgaataagtgatttcacata-tttctgttttct 39531445  T
Q  161 ttcgtatgtttttgtgatttcgt 183  Q
    || || |||||||||||||||||    
T  39531444 tttgtttgtttttgtgatttcgt 39531422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 11734892 - 11734808
Alignment:
Q  126 attgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| | ||||||||||||||||| |  ||||||| || || ||||||||||||||||||| ||||||||||| |||||||||||    
T  11734892 attgaataagtgatttcacatattttct--tttctttagtttgcttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 11734808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 25487667 - 25487740
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||   | ||||||||| |||||| |||||||||||||||||| |||||| || ||||||||||    
T  25487667 tttcacatattttcattgttctttcgtttgttttcgtgatttcgtcgtctttgtacgactttacttgttttgat 25487740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 32309226 - 32309295
Alignment:
Q  143 acatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||  |||||||||| | ||||||||| ||||||||||||||| |||||||  |||||||||||    
T  32309226 acatatttttagttttctttcttttgtttttgtaatttcgtcgtctttgcacgactcagtttgttttgat 32309295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 6682013 - 6681865
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||| ||||| |||| ||||||||||| | | | ||| |||||||||||| ||||   |||||| | ||||||||||||||||  |   ||||    
T  6682013 gggtgatttagagtcaaatttggcccaaaaatca-ctcattcgagttgtttttccttttatctgaattgaataagtgatttcacatattt--tcaattct 6681917  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| ||||||||| ||||||| |||| |  ||| |||| |||||||||||    
T  6681916 ttcgtttgtttttgtaatttcgttgtctctacacggctctgtttgttttgat 6681865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 35276032 - 35275976
Alignment:
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactct-atttgttttgat 212  Q
    ||||||||| |||||||||||||| |||||||||| |||||||| ||||||||||||    
T  35276032 ttctttcgtttgtttttgtgattttgtcgtctttgcacgactctaatttgttttgat 35275976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 11824970 - 11824826
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctga-ttgaacatgtgattt-cacatattttatgttttctt 161  Q
    ||||||| |||||||||||| |||||| ||| ||| |||||||| ||||||||||| || | | || |||| ||| ||| ||||||||||  || ||||     
T  11824970 tgatttaaggtcaattttgatccaaaa-tcatccc-tccgaattatttttccttct-tcattagttaaacaagtgtttttcacatattttgagtcttcta 11824874  T
Q  162 tcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    | || ||||||||||||||| ||||||||| |||||| ||||| ||||    
T  11824873 tagtttgtttttgtgatttcatcgtctttgcacgactttatttttttt 11824826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 585867 - 585940
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||   | || |||||| ||||||||||||||||||||||||| |  ||| | |||||||||||    
T  585867 tttcacatattttcaatcttatttcgtttgtttttgtgatttcgtcgtctttgcatcactttgtttgttttgat 585940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 6887304 - 6887263
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcacccc 98  Q
    ||||||||||||||||||||||||| | || |||||||||||    
T  6887304 agaggggtgatttagggtcaatttttaacccaaaatcacccc 6887263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 14534959 - 14535000
Alignment:
Q  140 ttcacatattttatgttttctttcgtatgtttttgtgatttc 181  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  14534959 ttcacatattttcagttttctttcgtttgtttttgtgatttc 14535000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 25961953 - 25962033
Alignment:
Q  108 gtttttccttctatcctgattgaacatgtgatttc-acatattttat-gttttctttcgtatgtttttgtgatttcgtcgt 186  Q
    |||||||||| |||||| ||| || | |||||||| |||||||||   |||||||||| | ||||||||||||||||||||    
T  25961953 gtttttccttatatcctaattaaataagtgatttctacatatttttcagttttctttcctttgtttttgtgatttcgtcgt 25962033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 9e-57; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 43474271 - 43474117
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| | ||||||||||| ||||| ||||    
T  43474271 agaggggtgatttagggtcaattttgacccaaaaatcaccca-tccgaattgtttttccttctatcctaattgaataagtgatttcacaaattttctgtt 43474173  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  43474172 ttctttcgtttgtttttgtgatttcgtcgtctctgaatgactctatttgttttgat 43474117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 20561275 - 20561121
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  || ||| | ||| ||||||||||||| ||||    
T  20561275 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgaattgtttttccttctatccaaatcgaataagtggtttcacatattttctgtt 20561177  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  20561176 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 20561121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 12704665 - 12704819
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||    
T  12704665 agaggggtgatttagggtcaattttgacccaaaaatcaccccttc-gaattgtttttccttatatcctaattgaataagtgatttcacatattttctgtt 12704763  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||| ||||||| ||||||||| | |||||||||||    
T  12704764 ttctttcgtttgtttttgtgattttgtcgtctctgaacgactttgtttgttttgat 12704819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 27095687 - 27095837
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  27095687 gggtgatttagggtcaattttgacctaaaaatcacccc-tccgagttgtttttccttctatcctaattgaataagtgatttcacatattttttgttttct 27095785  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||||| || |||||||| |||||||||||    
T  27095786 ttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgat 27095837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 5754266 - 5754418
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  ||||| |  |||||||||||||||| ||||    
T  5754266 agaggggtgatttagggtcaattttgacccaaaaatcatccc-tccgaattgtttttccttctatcctagttgaataaatgatttcacatattttttgtt 5754364  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttg 210  Q
    ||||||| | |||||||||||||||||||||| ||||||||||| |||||||||    
T  5754365 ttctttcatttgtttttgtgatttcgtcgtctatgaacgactctgtttgttttg 5754418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 25067830 - 25067984
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |||||| | ||||||||||||||||| ||||    
T  25067830 agagaggtgatttagggtcaattttgacccaaaaatcacccc-tccgatttgtttttccttctattttaattgaataagtgatttcacatattttctgtt 25067928  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||    
T  25067929 ttctttcgtttctttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 25067984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 44942267 - 44942417
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||| | ||||||||||||||||||||||||||    
T  44942267 gggtgatttatggtcaattttgacccaaaaatcacccc-tccgagttgttttttcttctatcctaattgaataagtgatttcacatattttatgttttct 44942365  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || || |||||||||||||||||||||||||||| ||||| ||||| |||||    
T  44942366 tttgtttgtttttgtgatttcgtcgtctttgaactactctgtttgtcttgat 44942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 11938002 - 11937847
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttcctt-ctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| | ||||||||||||||||| |||    
T  11938002 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgaattgtttttcctttctatcctaattgaataagtgatttcacatattttttgt 11937904  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||   ||||||| ||||| |||||| ||||||||||| |||||||||||    
T  11937903 tttctttcgttgatttttgtaatttcttcgtctctgaacgactctgtttgttttgat 11937847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 9978812 - 9978658
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||| |||| | |||||| |  |||||||||||||||| ||||    
T  9978812 agaggggtgatttaaggtcaattttgacccaaaaatcaccccttca-aattgtttttccttttatcttaattgaataaatgatttcacatattttctgtt 9978714  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  9978713 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 9978658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 22597113 - 22597267
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| ||| || | ||||||||||||||||| ||||    
T  22597113 agaggggtgatttaaggtcaattttgacccaaaaatcatccc-tccgagttgtttttccttctatcctaattaaataagtgatttcacatattttttgtt 22597211  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||| |||||||||||    
T  22597212 ttctttcgtttgtttttatgattttgtcgtctctgaacgactctgtttgttttgat 22597267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 38535448 - 38535297
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||||||||||| |||||| |  ||||| |||||||||||||| | |||||| | ||||||||||||||||| ||||    
T  38535448 agaggggtgatttagggtcaattttgacccaaaaagcaccccttt-gaattttttttccttctatcataattgaataagtgatttcacatattttctgtt 38535350  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||    
T  38535349 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttatttt 38535297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 33012059 - 33012209
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| || |||||| | |||||||||||||||||  ||||| |    
T  33012059 gggtgatttagggtcaattttgacccaaaaatcactca-tccgaattgtttttccttctattctaattgaataagtgatttcacatattttcagttttgt 33012157  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  33012158 ttcgtttgtttttgtgatttcgtcgtctctgaacaactctgtttgttttgat 33012209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 35333490 - 35333637
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttc 163  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||||||||||| ||||||| |||||| | ||||||||||||||||| |||||||||||    
T  35333490 tgatttaggatcaattttgacccaaaaatcacccc-taagaattgtttttcctgctatcctaattgaataagtgatttcacatattttctgttttctttc 35333588  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || | |||||||||||||||||| | ||||||||||| |||||||||||    
T  35333589 gtttatttttgtgatttcgtcgtttctgaacgactctgtttgttttgat 35333637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 7073091 - 7072937
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||||||||||||| |||  || |||||| ||||||||||||||| |||||| | || | |||||| ||||| ||||    
T  7073091 agaggggtgatttagggtcaattttgacccaaaaatcgccctttc-gaattggttttccttctatcctaattgaataagtaacttcacaaattttctgtt 7072993  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  7072992 ttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgat 7072937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 31908959 - 31908805
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| |||||||| ||||||||||| |||||||||||||  |||||||||||||| ||| ||||||  ||||| | ||||||||||||||||| ||||    
T  31908959 agagggatgatttagagtcaattttgatccaaaaatcaccct-tccgaattgttttttcttttatcctagttgaataagtgatttcacatattttctgtt 31908861  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||| |||||||||||||||||||||||| | |||||||||||    
T  31908860 ttctttcgtttgtttttctgatttcgtcgtctttgaacgactttgtttgttttgat 31908805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 36867986 - 36868140
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| || ||| || | | ||||||||||||||| |  |    
T  36867986 agaggggtgatttagggtcaattttgactcaaaaatcacccc-tctgaattgtttttccttctattctaattcaataagcgatttcacatattttctact 36868084  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||| |||||||||||    
T  36868085 ttctttcgtttgtttttgcgatttcgtcgtctctgaacgactctgtttgttttgat 36868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 15919852 - 15920005
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| |  ||||||||||||||||    |    
T  15919852 agaggggtgatttagagtcaattttgacccaaaaatca-cccctccgagttgtttttccttctatcctaattgaataaatgatttcacatatttt-caat 15919949  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||| ||| || |||||||| |||||||||||    
T  15919950 ttctttcgtttgtttttgtgatttcgtcatctctgcacgactctgtttgttttgat 15920005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 212
Target Start/End: Complemental strand, 13740801 - 13740649
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttt 157  Q
    ||||| ||||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |||||| | ||||||||| ||||||| |||||    
T  13740801 gagggatgatttatggtca-ttttgacccaaaaatcaccac-tccgaattgtttttccttctatcctaattgaataagtgatttcatatattttctgttt 13740704  T
Q  158 tctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||| |||||||||||||||||| |||  |||||||| | |||||||||||    
T  13740703 tctttcgtttgtttttgtgatttcgtcatctccgaacgactttgtttgttttgat 13740649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 34470952 - 34471098
Alignment:
Q  67 tttagggtcaattttgacccaaaaatcac-cccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgt 165  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| | ||||||   ||||||||||||||||| | |||||||||||    
T  34470952 tttagggtcaattttgacccaaaaatcacacccctccgaattgtttatctttctatcttaattgaatcagtgatttcacatattttctattttctttcgt 34471051  T
Q  166 atgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     ||||||||| || || |||||||||||||||||| |||||||||||    
T  34471052 ttgtttttgtaatgtcttcgtctttgaacgactctgtttgttttgat 34471098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 28262032 - 28261877
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgatt-----gaacatgtgatttcacatattttatgt 155  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| | |||     ||| ||||||||| ||||||||| |||    
T  28262032 gggtgatttagggtcaattttgacccaaaaatcactca-tccgaattgtttttccttctatcataatttaattgaatatgtgattttacatattttctgt 28261934  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||| ||| |||||||    
T  28261933 tttctttcgtttgtttttgtgatttcttcgtctctgaacgactctgtttcttttgat 28261877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 17268267 - 17268115
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  17268267 agaggggtgatttatggtcaattttgacccaaaaatcatcccttc-gagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 17268169  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||| || || ||||||||||||||||||| ||||||||| | |||||||||||    
T  17268168 tt-ttttgtttg-ttttgtgatttcgtcgtctctgaacgactttgtttgttttgat 17268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 18089535 - 18089385
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||| |||||| |||||| | ||||||||||||||||| ||||    
T  18089535 agaggggtgatttagggtcaattttgatccaaaaatcactcc-tccgaattgttttttcttatatcctaattgaataagtgatttcacatattttctgtt 18089437  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||     ||||||||||||||||||||| | ||| ||||| |||||||||||    
T  18089436 ttcttt----agtttttgtgatttcgtcgtctcttaacaactctttttgttttgat 18089385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 9690116 - 9689993
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||||| | ||||| ||||||||||| ||||    
T  9690116 agaggggtgatttaaggtcaaatttgacccaaaaatcacccc-tccgaactgtttttccttctatcctaattgaataagtgatctcacatattttttgtt 9690018  T
Q  157 ttctttcgtatgtttttgtgatttc 181  Q
    || |||||| |||||||||||||||    
T  9690017 ttttttcgtttgtttttgtgatttc 9689993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 4604446 - 4604296
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| ||||||||||||||||||||| || |  || || |||||||||||||||| || |||||| | ||||||||||||||||| || |||||    
T  4604446 gggtgatttaaggtcaattttgacccaaaaattactcattc-gagttgtttttccttctattctaattgaataagtgatttcacatattttctgctttct 4604348  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||  |||||||||||||||||||||| |||| |||||| |||||||||||    
T  4604347 ttcgattgtttttgtgatttcgtcgtctctgaatgactctgtttgttttgat 4604296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 4739310 - 4739461
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttt 157  Q
    ||||||||||||||||||||||  ||||| ||||||||||| ||||| ||||||||||||| ||||| ||| || | || |||||||||||||| |||||    
T  4739310 gaggggtgatttagggtcaatt--gaccccaaaatcacccc-tccgagttgtttttccttccatcctaattaaataagtaatttcacatattttctgttt 4739406  T
Q  158 tctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | || ||| |||||||||||||||||||||| |||| |||||| |||||||||||    
T  4739407 ttttccgtttgtttttgtgatttcgtcgtctctgaatgactctgtttgttttgat 4739461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 34416904 - 34416751
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| |||| || |||||||||||||| |||||||| ||| |||||||||||||||||| |||||| |||||| | |||||||||||||||||  |||    
T  34416904 agagggatgatctaaggtcaattttgaccaaaaaatcatccc-tccgaattgtttttccttatatcctaattgaataagtgatttcacatattttcagtt 34416806  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||| || ||||||||||||||||||||| |||||||||| | |||||||||||    
T  34416805 tttttttgtttgtttttgtgatttcgtcgtc-ttgaacgactttgtttgttttgat 34416751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 208
Target Start/End: Complemental strand, 10287135 - 10286999
Alignment:
Q  70 agggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgt 169  Q
    |||||||||||||||  |||||||||||| |||||||||  |||| || |||||| |||||| | ||||||||||||||||| ||||||||||||| |||    
T  10287135 agggtcaattttgacataaaaatcacccc-tccgaattgcatttcttt-tatcctaattgaataagtgatttcacatattttctgttttctttcgtttgt 10287038  T
Q  170 ttttgtgatttcgtcgtctttgaacgactctatttgttt 208  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  10287037 ttttgtgatttcgtcgtctttgaacgactttgtttgttt 10286999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 13879157 - 13878996
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt--------ccttctatcctgattgaacatgtgatttcacatat 148  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||        ||||||||||| |||||| | ||||||||||||||    
T  13879157 agagggatgatttagggtcaattttgacccaataatcacccc-tccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatat 13879059  T
Q  149 tttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| ||||| ||||||| | |||||||||||| ||||||| ||||||||||| |||||||||||    
T  13879058 tttctgtttcctttcgtttatttttgtgattt-gtcgtctctgaacgactctgtttgttttgat 13878996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 14019282 - 14019121
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt--------ccttctatcctgattgaacatgtgatttcacatat 148  Q
    |||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||        ||||||||||| |||||| | ||||||||||||||    
T  14019282 agagggatgatttagggtcaattttgacccaataatcacccc-tccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatat 14019184  T
Q  149 tttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| ||||| ||||||| | |||||||||||| ||||||| ||||||||||| |||||||||||    
T  14019183 tttctgtttcctttcgtttatttttgtgattt-gtcgtctctgaacgactctgtttgttttgat 14019121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 32015198 - 32015355
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgat----tgaacatgtgatttcacatatttta 152  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| | ||    | || | |||||||||||||||||     
T  32015198 agaggggtgatttagggtcaattttgacccaaaaatca-cccctccgagttgtttttccttatatcataattcaataaataagtgatttcacatattttc 32015296  T
Q  153 tgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| ||| | ||||||||||||||||||||| | |||| ||||| |||||||||||    
T  32015297 tgttttcattcatttgtttttgtgatttcgtcgtc-tcgaacaactctgtttgttttgat 32015355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 28231198 - 28231089
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    ||||||||||||||||||||||| || ||||| | ||||||||||||||||| ||||||||||||| ||||||||||||| | |||||| ||||| ||||    
T  28231198 tccgaattgtttttccttctatcttggttgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattccatcgtctctgaacaactc 28231099  T
Q  200 tatttgtttt 209  Q
    | ||||||||    
T  28231098 tgtttgtttt 28231089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 41797648 - 41797726
Alignment:
Q  134 tgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  41797648 tgtgatttcacatattatatgttttctttcgtttgtttttgtgatttcgtcgtcttagaacgactctgtttgttttgat 41797726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 32314462 - 32314574
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    |||||||||||||| |||||||||| |||||| |  |||||||||||||||| ||||||||||||| |||||||||||||| ||||||| |||   ||||    
T  32314462 tccgaattgttttttcttctatcctaattgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctgacgaactc 32314561  T
Q  200 tatttgttttgat 212  Q
    | |||||||||||    
T  32314562 tgtttgttttgat 32314574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 4732059 - 4732202
Alignment:
Q  67 tttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgta 166  Q
    |||||||||||||||||| ||||||||||||  |   | |||  |||||||||||||| |||||| | ||||||||||||| ||| |||||| ||||||     
T  4732059 tttagggtcaattttgactcaaaaatcaccct-tgttagttgcatttccttctatcctaattgaataagtgatttcacatactttttgtttt-tttcgtt 4732156  T
Q  167 tgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||||||| |||||| ||||||| ||| |||||||||||    
T  4732157 tgtttttgtgatttcatcgtctctgaacgaatctgtttgttttgat 4732202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 34963208 - 34963065
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||| |||| ||||||||||||||| ||||||||||| ||  || ||||||||||||||| ||| |||||| | |||||||||||| |||| ||||    
T  34963208 agaggggtaattttgggtcaattttgacctaaaaatcaccctct--gatttgtttttccttctaccctaattgaataagtgatttcacattttttctgtt 34963111  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||          ||||||||||||||||||| ||||||||||| |||||||||||    
T  34963110 ttc----------ttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 34963065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 4426759 - 4426647
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    ||||| ||||||||||||||||||| |||||| |  |||||||||||||||| ||||||||||| | ||||||| |||||||||||||| | |||| |||    
T  4426759 tccgatttgtttttccttctatcctaattgaataaatgatttcacatattttctgttttctttcatttgtttttttgatttcgtcgtctctaaacgtctc 4426660  T
Q  200 tatttgttttgat 212  Q
    |  ||||||||||    
T  4426659 tgcttgttttgat 4426647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 12891185 - 12891108
Alignment:
Q  135 gtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||||||||||  |||||||||| |||||||||||    
T  12891185 gtgatttcacatattttctattttctttcgtttgtttttgtgatttcgtcgtctcggaacgactctgtttgttttgat 12891108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 38384585 - 38384481
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||| |||||||||||||||||||||||| |  |||||| |||||||||||| || ||| |||||| | |||||||||||| |||| ||||    
T  38384585 agaggggtgattttgggtcaattttgacccaaaaatca-catctccgatttgtttttccttataccctaattgaataagtgatttcacattttttttgtt 38384487  T
Q  157 ttcttt 162  Q
    | ||||    
T  38384486 tccttt 38384481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 17767690 - 17767566
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttttc 159  Q
    ||||||||||| ||||||||||||||| || ||||||| || || |||||||||||| |||||| ||| || | |||||||| |||||||||  ||||||    
T  17767690 gggtgatttagagtcaattttgacccagaa-tcaccccttc-gagttgtttttccttatatcctaattaaataagtgatttccacatattttcagttttc 17767593  T
Q  160 tttcgtatgtttttgtgatttcgtcgt 186  Q
    |||| | || |||||||||||||||||    
T  17767592 tttcatttgattttgtgatttcgtcgt 17767566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 12891232 - 12891191
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcacccc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12891232 agaggggtgatttagggtcaattttgacccaaaaatcacccc 12891191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 29542881 - 29542924
Alignment:
Q  169 tttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  29542881 tttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 29542924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 11798653 - 11798537
Alignment:
Q  63 gtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgattt-cacatattttatgttttctt 161  Q
    |||||||| ||||||||||||||| ||||||| |||||||   ||| |||||||| |||||| ||| || | || |||| ||||||||||  ||||||||    
T  11798653 gtgatttatggtcaattttgaccc-aaaatca-cccctccatgttgcttttccttatatcctaattaaataagtaatttccacatatttttagttttctt 11798556  T
Q  162 tcgtatgtttttgtgattt 180  Q
    | || ||||||||||||||    
T  11798555 ttgtttgtttttgtgattt 11798537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 17116464 - 17116394
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    |||||||||||||  || ||||||||| ||||| ||||||||||||||||||| || || ||| |||||||    
T  17116464 tttcacatattttcagtcttctttcgtttgtttatgtgatttcgtcgtctttgcacaaccctacttgtttt 17116394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 6431483 - 6431402
Alignment:
Q  106 ttgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttttctttcgtatgtttttgtgatttcgtcgt 186  Q
    |||||||||||| ||| || ||| || | |||||||| |||||||||  ||||||||| || ||||||||||||||||||||    
T  6431483 ttgtttttccttatattctaattaaataagtgatttccacatattttcagttttcttttgtttgtttttgtgatttcgtcgt 6431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 17792533 - 17792578
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtc 184  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||    
T  17792533 tttcacatattttcagttttctttcgtttgtttttgtgatttcgtc 17792578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 28231200 - 28231237
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcacccc 98  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  28231200 gggtgatttagggtcaattttaacccaaaaatcacccc 28231237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 41797593 - 41797648
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt 113  Q
    |||||||||||||||||| |||||||||| |||||||| |||||| || ||||||||    
T  41797593 agaggggtgatttagggttaattttgacctaaaaatca-cccctcagagttgttttt 41797648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 20607374 - 20607332
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttc 181  Q
    |||||||||||||  |||||||||||| |||||||||||||||    
T  20607374 tttcacatattttcagttttctttcgtttgtttttgtgatttc 20607332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 11581190 - 11581141
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    ||||| |||||||  ||||||||| || ||||||||||||||||||||||    
T  11581190 tttcatatatttttagttttctttggtttgtttttgtgatttcgtcgtct 11581141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 823999 - 823947
Alignment:
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| | |||||||||||| |||||||||| ||||| ||||| ||||||||    
T  823999 tttcgtttctttttgtgattttgtcgtctttgcacgaccctattagttttgat 823947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 17926323 - 17926279
Alignment:
Q  167 tgtttttgtgatttcgtcgtctttgaacgactctatttgttttga 211  Q
    ||||||||||||||||| ||||||| |||||| | ||||||||||    
T  17926323 tgtttttgtgatttcgtagtctttgcacgactttgtttgttttga 17926279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 37612631 - 37612783
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||| | ||||||||||||||||| | ||    
T  37612631 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgaattttttttccttctatcctagttgaataagtgatttcacatattttttatt 37612729  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttg 210  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  37612730 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctatttgttttg 37612783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 10338969 - 10338819
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||||||    
T  10338969 gggtgatttaaggtcaattttgacgcaaaaatcacccc-tccgaattgtttttccttttatcctaattgaataagtgatttcacatattttttgttttct 10338871  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  10338870 ttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgat 10338819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 14600849 - 14600695
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| ||||||||||||||||||||||||||||||||| ||  ||||| |||||||| |||||||||| |||||| |  |||||||||||||||| ||||    
T  14600849 agagaggtgatttagggtcaattttgacccaaaaatcatcca-tccgagttgttttttcttctatcctaattgaataactgatttcacatattttctgtt 14600751  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  14600750 ttctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtttgttttgat 14600695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 30027031 - 30026877
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||| |||||||| |||||||| | |||||| | ||||||||||||||||| ||||    
T  30027031 agaggggtgatttagggtcatttttgacccaaaaatcaccca-tccgagttgttttttcttctatcataattgaataagtgatttcacatattttctgtt 30026933  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  30026932 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 30026877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 2234617 - 2234467
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||| |||||| |||||||| |||||||||||||| || ||||||||||||||||||||||  ||||| | ||||||||||||||||| ||||||||    
T  2234617 gggtgatctagggttaattttgatccaaaaatcaccccttc-gaattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttct 2234519  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  2234518 ttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 2234467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 24791319 - 24791165
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||| |||||| ||| || | ||||||| ||||||||| ||||    
T  24791319 agaggggtgatttatggtcaattttgacccaaaaatcatcca-tccgaattgtttttccttatatcctaattcaataagtgatttaacatattttctgtt 24791221  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  24791220 ttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 24791165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 31407899 - 31407745
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |  ||||| |  |||||||||||||||| ||||    
T  31407899 agaggggtgatttagggtcaattttgacccaaaaatcatctc-tccgaattgtttttccttctatcatagttgaataaatgatttcacatattttttgtt 31407801  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||||    
T  31407800 ttctttcgtttgtttttatgatttcgtcgtctctgaacgactctgtttgttttgat 31407745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 39067840 - 39067686
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||||    ||| ||||||||||||||||||||| ||| || | ||||||||||||||||| ||||    
T  39067840 agaggggtgatttaaggtcaattttgacccaaaaatcactgt-tccaaattgtttttccttctatcctaatttaataagtgatttcacatattttctgtt 39067742  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  39067741 ttctttcgtttgtttttgtgatttcgtcgtctttgaacgactatgtttgttttgat 39067686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 41361712 - 41361864
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| | | |||||| | ||||||||||||||||| ||||||    
T  41361712 aggggtgatttatggtcaattttgacccaaaaatcacccc-tccgatttgtttttccttctaccgtaattgaataagtgatttcacatattttctgtttt 41361810  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| |||||||||||||| ||||||| | ||||||||| |||||||||||    
T  41361811 ctttcgtttgtttttgtgatttggtcgtctctaaacgactctgtttgttttgat 41361864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 31308120 - 31308280
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcacccc-----ctccgaattgtttttccttctatcctgattgaacatgtgatttcacatatttt 151  Q
    |||||||||||||| |||||||||||| | |||||||||| |     |||||| ||||||||||||||||||| |||||| | |||||||||||||||||    
T  31308120 agaggggtgatttaaggtcaattttgatctaaaaatcacctctccgactccgagttgtttttccttctatcctaattgaataagtgatttcacatatttt 31308219  T
Q  152 atgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||| |||||||||||    
T  31308220 atgttttctttcgtttgtttttgtgatttcgtcgtctctaaacgactctgtttgttttgat 31308280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 9501572 - 9501710
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttt-tccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||||||||| |||||||||||||  || |||||||||| |||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  9501572 ggtgatttagggtcaattttgatccaaaaatcaccca-tctgaattgttttttccttctatcctaattgaataagtgatttcacatattttctgttttct 9501670  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactct 200  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  9501671 ttcgtttgtttttgtgatttcgtcgtctctgaacgactct 9501710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 31202440 - 31202590
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||| ||||||||||||||||||||||| ||  ||| ||||||||||| ||||||  | |||||| | ||||||||||||||||| |||||| |    
T  31202440 gggtgatttaaggtcaattttgacccaaaaatcatcca-tccaaattgtttttctttctattataattgaataagtgatttcacatattttctgttttgt 31202538  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  31202539 ttcgtttgtttttgtgatttcgtcgtctctgaacaactctatttgttttgat 31202590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 3204899 - 3204753
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttc 163  Q
    |||||||| |||||||||||||||||||| ||||  |||||||||||||||| ||||| || ||| ||   ||||||||||||||||| |||||||||||    
T  3204899 tgatttagagtcaattttgacccaaaaattaccc--tccgaattgtttttccatctattctaatttaatgagtgatttcacatattttctgttttctttc 3204802  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||||| |||||||||||||||| ||||||||||| |||||||||||    
T  3204801 gtttgtttatgtgatttcgtcgtctctgaacgactctgtttgttttgat 3204753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 10147924 - 10148079
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttc-cttctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||  |||||||||| |||||| | ||||||||||||||||| |||    
T  10147924 agaggggtgatttagggtcaattttgacccaataatcacccc-tccgagttgtttttttcttctatcctaattgaataagtgatttcacatattttctgt 10148022  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||||||| |||||||| ||||  ||||||| | ||||||||| |||||||||||    
T  10148023 ttcctttcgtttgtttttgagattatgtcgtctctaaacgactctgtttgttttgat 10148079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 12329608 - 12329759
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||| ||||||||||| ||||||||||||   || ||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||||||    
T  12329608 gggtgatttagagtcaattttgatccaaaaatcaccatttc-gaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttct 12329706  T
Q  161 ttcg-tatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| | |||||||||||||||||||||| ||||||||| | |||||||||||    
T  12329707 ttcgttttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgat 12329759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 37128595 - 37128483
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    |||||||||||||||||||||||||  ||||| | ||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| | ||||||||    
T  37128595 tccgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtaatttcgtcgtctctcaacgactc 37128496  T
Q  200 tatttgttttgat 212  Q
    |||||||||||||    
T  37128495 tatttgttttgat 37128483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 2025360 - 2025206
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| |||||||||||||| |||||||||||  ||| | |||||||||||| ||| || |||||| | |||||||||||| |||| ||||    
T  2025360 agaggggtgatttatggtcaattttgaccaaaaaatcaccct-tccaagttgtttttccttttattctaattgaataagtgatttcacatgttttctgtt 2025262  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||| | |||||||||||||||||||| ||||||| ||| |||||||||||    
T  2025261 ttatttcgtttatttttgtgatttcgtcgtctctgaacgattctgtttgttttgat 2025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 1810370 - 1810231
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||| ||| || | |||||||||||| |||| || |    
T  1810370 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgatttttttttc-ttctatcctaattcaataagtgatttcacattttttctgat 1810273  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgact 198  Q
    ||||||||| ||||||||||||||| |||| | |||||||||    
T  1810272 ttctttcgtttgtttttgtgatttcctcgtatctgaacgact 1810231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 1040037 - 1039891
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttc 163  Q
    ||||||| |||||||||||| |||||||||||||  ||||||||| |||||||||||| || ||| || | ||||||||||||||||| || ||||||||    
T  1040037 tgatttaaggtcaattttgatccaaaaatcaccca-tccgaattggttttccttctattctaattcaataagtgatttcacatattttctgctttctttc 1039939  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     | |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  1039938 atttgtttt-gtgattttgtcgtctctgaacgactctatttgttttgat 1039891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 11161860 - 11161990
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||  | ||||||||| || |||||| |||||| | || ||||||||| ||||  |||    
T  11161860 agaggggtaatttagggtcaattttgacccaaaaatcaccccttca-agttgtttttctttatatcctaattgaataagtcatttcacatcttttcagtt 11161958  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    ||||||||| ||||||||||||||||||||||    
T  11161959 ttctttcgtttgtttttgtgatttcgtcgtct 11161990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 24699812 - 24699961
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttc--cttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||  |||||||   ||| |||||| ||| || | ||||||||||||||||| ||||||    
T  24699812 gggtgatttagggtcaattttgacccaaaaatcaccca-tccgagatgttttttttcttatatcctaattaaataagtgatttcacatattttctgtttt 24699910  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||| | || |||||| |||||||||||| ||||||||||| ||||||||    
T  24699911 ctttcatttgcttttgtaatttcgtcgtctctgaacgactctgtttgtttt 24699961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 7579938 - 7579852
Alignment:
Q  126 attgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  7579938 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 7579852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 23971245 - 23971112
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| |||||||||  || |||||||||| ||||||||| |  ||||| |||||||||||||||| || |||||| | ||||||||||||||||||||||    
T  23971245 agagaggtgatttaaagtaaattttgaccaaaaaatcactca-tccgagttgtttttccttctattctaattgaataagtgatttcacatattttatgtt 23971147  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaa 193  Q
    ||||||||| ||  |||||||||| ||||||| ||||    
T  23971146 ttctttcgtttg--tttgtgattttgtcgtctctgaa 23971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 207
Target Start/End: Complemental strand, 30039476 - 30039339
Alignment:
Q  63 gtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgattt-cacatattttatgttttctt 161  Q
    |||||||| ||||||||||||||||||| |||| |  |||||||||||||||||||| | || |||||| ||||||||| |||||||      |||||||    
T  30039476 gtgatttatggtcaattttgacccaaaa-tcactca-tccgaattgtttttccttcttttctaattgaatatgtgatttccacatat------ttttctt 30039385  T
Q  162 tcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtt 207  Q
    |||| |||||||||||||||||||||| || |||||||| ||||||    
T  30039384 tcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgtt 30039339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 13570877 - 13570753
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||| ||||||||||| | ||||||||  |  ||| ||||||||||| ||||||||| ||| || | ||||||||||||||||| | ||    
T  13570877 agaggggtgatttagagtcaattttgatctaaaaatcattca-tcccaattgtttttcattctatcctaattaaataagtgatttcacatattttctatt 13570779  T
Q  157 ttctttcgtatgtttttgtgatttcg 182  Q
    || |||||| ||||||||||||||||    
T  13570778 ttttttcgtttgtttttgtgatttcg 13570753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 15288926 - 15288823
Alignment:
Q  80 ttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatt 179  Q
    ||||| ||||||||| ||| || |||||||||||| ||||||||| ||| || | |||||||||| |||||| ||||||||||||| |||||||||||||    
T  15288926 ttgactcaaaaatcatcccttc-gaattgtttttctttctatcctaattaaatacgtgatttcacttattttctgttttctttcgtttgtttttgtgatt 15288828  T
Q  180 tcgtc 184  Q
    |||||    
T  15288827 tcgtc 15288823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 15469295 - 15469192
Alignment:
Q  80 ttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatt 179  Q
    ||||| ||||||||| ||| || |||||||||||| ||||||||| ||| || | |||||||||| |||||| ||||||||||||| |||||||||||||    
T  15469295 ttgactcaaaaatcatcccttc-gaattgtttttctttctatcctaattaaatacgtgatttcacttattttctgttttctttcgtttgtttttgtgatt 15469197  T
Q  180 tcgtc 184  Q
    |||||    
T  15469196 tcgtc 15469192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 22787528 - 22787624
Alignment:
Q  116 ttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||  ||||| | ||||||| ||||||||| ||||||||||||| ||||||||||||| |||||| | ||||||||||| |||||||||||    
T  22787528 ttctatcctagttgaataagtgatttaacatattttctgttttctttcgtttgtttttgtgattccgtcgtttctgaacgactctgtttgttttgat 22787624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 4757191 - 4757294
Alignment:
Q  106 ttgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttg 205  Q
    ||||||||||||||||| | ||| || |  |||||||||||||||| ||||||||||| | | |||||  ||||||||||||| ||||||||||| ||||    
T  4757191 ttgtttttccttctatcataattaaataaatgatttcacatattttctgttttctttcatttctttttaagatttcgtcgtctctgaacgactctgtttg 4757290  T
Q  206 tttt 209  Q
    ||||    
T  4757291 tttt 4757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 2968513 - 2968664
Alignment:
Q  63 gtgatttagggtcaattttgacccaaaaatcacccc--ctccgaattgtttttccttctatcctgattgaacatgtgattt-cacatattttatgttttc 159  Q
    |||||||| ||||||||||||| ||||| ||||| |  |||||| ||||||||| || ||| || ||| || | ||||||| ||||||||||  ||||||    
T  2968513 gtgatttatggtcaattttgactcaaaa-tcacctctcctccgagttgtttttctttatattctaattaaataagtgattttcacatatttttagttttc 2968611  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| |||||||||||||| ||||||| || || ||| | |||||||||||    
T  2968612 tttcgtttgtttttgtgattttgtcgtctctgcacaactttgtttgttttgat 2968664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 10334159 - 10334307
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatg-ttttcttt 162  Q
    |||||||||||||||||||| ||||||||||| |  |  || ||||||||||||||||||| ||| || | |||| |||| |||||||    ||||||||    
T  10334159 tgatttagggtcaattttgatccaaaaatcactca-tatgagttgtttttccttctatcctaattaaataagtgagttcatatatttttcaattttcttt 10334257  T
Q  163 cgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     || |||||| ||||||||||| |||||| |||||||| || ||||||||    
T  10334258 tgtttgttttagtgatttcgtcatctttgcacgactctgttggttttgat 10334307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 7583915 - 7583851
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatc 122  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  7583915 agaggggtgatttaggatcaattttgacccaaaaatca-cccatccgagttgtttttccttttatc 7583851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 28297230 - 28297122
Alignment:
Q  86 caaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatat-tttatg-ttttctttcgtatgtttttgtgatttcgt 183  Q
    ||||||||||| | ||||| |||||||||||||| | || ||||||   ||||||||| |||| ||||   ||||||||||| |||||||||||||||||    
T  28297230 caaaaatcaccgc-tccgagttgtttttccttcttttctaattgaattagtgatttcatatatatttaccattttctttcgtctgtttttgtgatttcgt 28297132  T
Q  184 cgtctttgaa 193  Q
    ||||| ||||    
T  28297131 cgtctctgaa 28297122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 7281631 - 7281780
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttt--tct 160  Q
    |||||||||||||||| | ||| |||| ||||||  ||||||||||||||| |||| | ||  ||||| | |||||||| | ||||||| |  ||  |||    
T  7281631 tgatttagggtcaattctaacctaaaa-tcaccca-tccgaattgtttttctttcttttctagttgaataagtgatttccatatatttttttattgttct 7281728  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| ||||||||||||||| ||||||||| | |||||| ||| |||||||    
T  7281729 ttcgtttgtttttgtgatttcatcgtctttgcatgactctgtttattttgat 7281780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 13576326 - 13576261
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcct 124  Q
    |||||||||||||||| |||||||||| || |||||||  |||||||| ||||||||| |||||||||    
T  13576326 agaggggtgatttaggatcaattttga-cctaaaatca-tccctccgagttgtttttctttctatcct 13576261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 32779064 - 32778973
Alignment:
Q  96 cccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttttctttcgtatgtttttgtgatttcgtcgt 186  Q
    ||||| ||| |||||||||||| |||| | ||| || | | |||||| |||||||||  |||||||||||| | ||||||||||||||||||    
T  32779064 ccccttcgagttgtttttccttatatcataattaaataagagatttccacatattttcagttttctttcgtttatttttgtgatttcgtcgt 32778973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 7584000 - 7583967
Alignment:
Q  65 gatttagggtcaattttgacccaaaaatcacccc 98  Q
    ||||||||||||||| ||||||||||||||||||    
T  7584000 gatttagggtcaattatgacccaaaaatcacccc 7583967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 7270067 - 7270119
Alignment:
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    |||||| || ||||||||||||||| ||||||||  |||||||||||| ||||    
T  7270067 ttcttttgtttgtttttgtgatttcatcgtctttacacgactctatttatttt 7270119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 90
Target Start/End: Complemental strand, 25939793 - 25939765
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaa 90  Q
    |||||||||||||||||||||||||||||    
T  25939793 ggtgatttagggtcaattttgacccaaaa 25939765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 15590222 - 15590068
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| |||||| | ||||||||||||||||| ||||    
T  15590222 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tctgaattgttttttcttctatcctaattgaataagtgatttcacatattttctgtt 15590124  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| || ||||||||||||||||||| ||||||||||| |||||||||||    
T  15590123 ttctttcgtttgcttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 15590068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 12481513 - 12481359
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| | | |||||| | ||||||||||||||||| ||||    
T  12481513 agaggggtgatttaggatcaattttgacccaaaaatcacccc-tccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 12481415  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| | ||||||| | |||||||||||    
T  12481414 ttctttcgtttgtttttgtgatttcgtcgtctctaaacgactttgtttgttttgat 12481359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 14783314 - 14783160
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||  ||||| | ||||||||||||||||| ||||    
T  14783314 agagggctgatttagggtcaattttgacccaaaaatcacgcc-tccgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtt 14783216  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| | | |||||||||||||||||||| ||||| ||||| |||||||||||    
T  14783215 ttctttcatttctttttgtgatttcgtcgtctctgaacaactctgtttgttttgat 14783160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 21507951 - 21507797
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||  ||||| | ||||||||||||||||| ||||    
T  21507951 agaggggtgatttagggtcaattttgacccaaacatcacccc-tccaaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtt 21507853  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||| ||||||| | ||||||| | |||||||||||    
T  21507852 ttctttcgtttgtttttgtgattttgtcgtctctaaacgactttgtttgttttgat 21507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 6420001 - 6419862
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  6420001 agaggggtgatttagggtcaattttgatccaaaaatcacccc-tctgagttgtttttccttctatcctaattgaataagtgatttcacatattttttgtt 6419903  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgac 197  Q
    ||||||| | |||||||||||||||||||||| ||||||||    
T  6419902 ttctttcatttgtttttgtgatttcgtcgtctctgaacgac 6419862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 23654228 - 23654382
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| | | | |||| | ||||||||||||||||| ||||    
T  23654228 agagaggtgatttagggtcaattttgacccaaaaatcaccca-tccgatttgtttttccttctaccttaactgaataagtgatttcacatattttttgtt 23654326  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  23654327 ttatttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 23654382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 212
Target Start/End: Complemental strand, 19402950 - 19402797
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttt 157  Q
    |||||||||||| |||||| |||||| |||||||||||||| |  || |||||||||||| |||| | |||||||| ||||||||||||||||| |||||    
T  19402950 gaggggtgatttcgggtcacttttgatccaaaaatcaccccttt-gagttgtttttccttgtatcataattgaacaagtgatttcacatattttctgttt 19402852  T
Q  158 tctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  19402851 tctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 19402797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 61 - 211
Target Start/End: Complemental strand, 31937557 - 31937410
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| | ||||||||||||||||| || ||| |    
T  31937557 gggtgatttagggtcagttttgacccaaaaatcacccc-tccgaattgtttttc-ttctatcctaattgaataagtgatttcacatattttctgattt-t 31937461  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttga 211  Q
    ||||| |||||||||||||||||||||| | ||||||||| ||||||||||    
T  31937460 ttcgtttgtttttgtgatttcgtcgtctctaaacgactctgtttgttttga 31937410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 2304953 - 2304802
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||| || |||||||||||||||||| ||| || || ||||||| |||||| || | |||||| | ||||||||||||||||| ||||    
T  2304953 agaggggtgatttaggatcgattttgacccaaaaatcaaccc-tctgagttgttttcccttctgtcataattgaataagtgatttcacatattttctgtt 2304855  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  2304854 ttctttcgtttgtttttgtgatttcgtcgtctctgaatgactctatttgtttt 2304802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 8693803 - 8693646
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctg---attgaacatgtgatttcacatattttat 153  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    |||||| | ||||||||||||||||| |    
T  8693803 agaggggtgatttaaggtcaattttgacccaaaaatcaccca-tccgaattgtttttccttctatcctcctaattgaataagtgatttcacatattttct 8693705  T
Q  154 gttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||| ||||||||| |||| ||||||| |||||||||   |||||||||||    
T  8693704 gttttctttcgtttgtttttgtcattttgtcgtctctgaacgacttcgtttgttttgat 8693646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 4922023 - 4921870
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    ||||||||||||||||||||||||||||||||||  ||| | | | | | |||||||||||||| | |||||| | |||||||||||||||||  |||||    
T  4922023 aggggtgatttagggtcaattttgacccaaaaatacccctcccagtagtttttttccttctatcttaattgaataagtgatttcacatattttcagtttt 4921924  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     |||||| |||||||||||||| ||||||| || ||||||||||||||||||||    
T  4921923 atttcgtttgtttttgtgattttgtcgtctctgcacgactctatttgttttgat 4921870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 4393777 - 4393902
Alignment:
Q  86 caaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcg 185  Q
    ||||||||||||| || || ||||||| ||||||||||| || ||||| ||||||||||||||||| | ||||||||||| ||||||||||||||| | |    
T  4393777 caaaaatcacccc-tctgagttgttttaccttctatcctaatagaacaagtgatttcacatattttcttttttctttcgtttgtttttgtgatttcatgg 4393875  T
Q  186 tctttgaacgactctatttgttttgat 212  Q
    ||| || |||| ||| |||||||||||    
T  4393876 tctctgcacgattctgtttgttttgat 4393902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 35220045 - 35219920
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttt 157  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| | ||| ||||||||||||||  || ||| | ||||| ||||||||||| |||||    
T  35220045 gaggggtgatttagggtcaattttgactcaaaaatca-cccctccaagttg-ttttccttctatccgaatcgaataagtgatatcacatattttctgttt 35219948  T
Q  158 tctttcgtatgtttttgtgatttcgtcgt 186  Q
    ||||| || || |||||||||||||||||    
T  35219947 tcttttgtttg-ttttgtgatttcgtcgt 35219920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 6296395 - 6296238
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaa--tcaccccctccgaattgttttt-ccttctatcctgattgaacatgtgatttcacatattttat 153  Q
    ||||||||||||||| || |||||||||| |||||  |||  |  |||||||||||||| ||||||| ||| |||||| | ||| ||||||||||||| |    
T  6296395 agaggggtgatttagagttaattttgacctaaaaaaatcattct-tccgaattgttttttccttctaccctaattgaataagtggtttcacatattttct 6296297  T
Q  154 gttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
      |||||||||| |||||||||||||||||||||| ||||||||| |  ||||||||||    
T  6296296 agtttctttcgtttgtttttgtgatttcgtcgtctctgaacgactttgcttgttttgat 6296238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 6303205 - 6303048
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaa--tcaccccctccgaattgttttt-ccttctatcctgattgaacatgtgatttcacatattttat 153  Q
    ||||||||||||||| || |||||||||| |||||  |||  |  |||||||||||||| ||||||| ||| |||||| | ||| ||||||||||||| |    
T  6303205 agaggggtgatttagagttaattttgacctaaaaaaatcattct-tccgaattgttttttccttctaccctaattgaataagtggtttcacatattttct 6303107  T
Q  154 gttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
      |||||||||| |||||||||||||||||||||| ||||||||| |  ||||||||||    
T  6303106 agtttctttcgtttgtttttgtgatttcgtcgtctctgaacgactttgcttgttttgat 6303048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 23638211 - 23638107
Alignment:
Q  108 gtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtt 207  Q
    |||||||||||||   | |||||| | ||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||| ||||  ||||| ||||||    
T  23638211 gtttttccttctacaataattgaataagtgatttcacatattttctgttttctttcgtttgtgtttgtaatttcgtcgtctctgaagaactctgtttgtt 23638112  T
Q  208 ttgat 212  Q
    |||||    
T  23638111 ttgat 23638107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 31705223 - 31705297
Alignment:
Q  138 atttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||| | ||||||| ||| || ||||||||||||||||||| ||||||||||| |||||||||||    
T  31705223 atttcacatattttctattttcttccgtttgcttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 31705297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 4084996 - 4085060
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatc 122  Q
    ||||||||||||||||||||||||||||| ||||||||  || |||||||||||||||||||||||    
T  4084996 agaggggtgatttagggtcaattttgaccgaaaaatca-tccttccgaattgtttttccttctatc 4085060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 29927160 - 29927095
Alignment:
Q  135 gtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactct 200  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||| | |||||||||    
T  29927160 gtgatttcacaaattttctgttttctttcgtttgtttttgtgattttgtcgtctctaaacgactct 29927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 29927516 - 29927449
Alignment:
Q  63 gtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaa 131  Q
    |||||||| ||||||||||||||||||||||| | ||||| | ||||||||||||||||||| ||||||    
T  29927516 gtgatttatggtcaattttgacccaaaaatca-ctcctccaagttgtttttccttctatcctaattgaa 29927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 29284839 - 29284884
Alignment:
Q  167 tgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||    
T  29284839 tgtttttgtgatttcgtcgtctttgcacgactttgtttgttttgat 29284884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 31801293 - 31801243
Alignment:
Q  138 atttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    ||||||||||||||  ||||||||| || |||| |||||||||||||||||    
T  31801293 atttcacatattttcagttttcttttgtttgttgttgtgatttcgtcgtct 31801243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 8508202 - 8508251
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    |||||||||||||   ||||||||||  ||||||||||||||||||||||    
T  8508202 tttcacatatttttaattttctttcgattgtttttgtgatttcgtcgtct 8508251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 20028757 - 20028708
Alignment:
Q  142 cacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttg 191  Q
    ||||||||||  || || |||||| |||||||||||||||||||||||||    
T  20028757 cacatattttccgtcttatttcgtttgtttttgtgatttcgtcgtctttg 20028708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 27135200 - 27135241
Alignment:
Q  167 tgtttttgtgatttcgtcgtctttgaacgactctatttgttt 208  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  27135200 tgtttttgtgatttcgtcgtctctacacgactctatttgttt 27135241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 15057722 - 15057774
Alignment:
Q  121 tcctgattgaacatgtgatttcacatattttatgttttctttcgtatgttttt 173  Q
    |||| |||||| | ||||||||||||||||| ||||||||||| | |||||||    
T  15057722 tcctaattgaatacgtgatttcacatattttctgttttctttcatctgttttt 15057774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 11819061 - 11819215
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | | |||||| | ||||||||||||||||||||||    
T  11819061 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgatttgtttttccttctaccttaattgaataagtgatttcacatattttatgtt 11819159  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||    
T  11819160 ttctttcatttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 11819215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 31270308 - 31270458
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  31270308 gggtgatttagggtcaattttgacccaaaaatcaccccttc-gaattatttttccttctatcctaattgaataagtgatttcacatattttatgttttct 31270406  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| ||||||||| |||||||||||| ||||||||||| |||||||||||    
T  31270407 ttcgtttgtttttgtaatttcgtcgtctctgaacgactctgtttgttttgat 31270458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 31462897 - 31462743
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||| | ||||||| ||||||||| ||||    
T  31462897 agaggggtgatttagggtcaattttgacccaaaaatcaccccttc-gaattgtttttccttatatcctaattgaataagtgattttacatattttctgtt 31462799  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| || |||||||||||||||||||||| ||||||||||| |||||||||||    
T  31462798 ttcttttgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 31462743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 36691950 - 36691796
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  36691950 agaggggtgatttagggtcaattttgacccaaaaatcacccc-tccgagttatttttccttctatcctaattgaataagtgatttcacatattttctgtt 36691852  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | ||||||| |||||||||||||||||||||| ||||||||| | |||||||||||    
T  36691851 tcctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgat 36691796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 53155581 - 53155430
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| |||||| ||| || | ||||||||||||||||||||||    
T  53155581 agaggggtgatttagggtcaattttgacccaaaaatcacccattc-gaattgtttttccttatatcctaattcaataagtgatttcacatattttatgtt 53155483  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||    
T  53155482 ttctttcgtttgtttttgtaatttcgtcgtatttgaacgactctgtttgtttt 53155430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 32080901 - 32080751
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | | |||||| | ||||||||||||||||| ||||||||    
T  32080901 gggtgatttagggtcaattttgacccaaaaatcacccc-tccgatttgtttttccttctaccttaattgaataggtgatttcacatattttctgttttct 32080803  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  32080802 ttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttttgat 32080751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 35174684 - 35174836
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||| ||| ||||||||||| ||||||||||||||||| |  |||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||    
T  35174684 aggggttattaagggtcaatttcgacccaaaaatcaccccttt-gaattgtttttccttctatcctaattgaataagtgatttcacatattttttgtttt 35174782  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  35174783 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 35174836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 14585440 - 14585594
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  14585440 agaggggtgatttagagtcaattttgacccaaaaatcactcc-tctaaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 14585538  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| || ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  14585539 ttcttttgtttgtttttgtgatttcctcgtctctgaacgactctgtttgttttgat 14585594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 48652591 - 48652437
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| | | |||||| | ||||||||||||||||| ||||    
T  48652591 agaggggtgatttagggtcaactttgacccaaaaatcacccc-tccgatttgtttttccttctaccttaattgaataagtgatttcacatattttctgtt 48652493  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| | ||||||| | |||||||||||    
T  48652492 ttctttcgtttgtttttgtgatttcgtcgtctctaaacgactttgtttgttttgat 48652437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 3456921 - 3457067
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||||| |||||| | ||||||| ||||||||| ||||    
T  3456921 agaggggtgatttatggtcaattttgatccaaaaatcacctc-tccgaattgtttttccttctatcctaattgaataagtgatttaacatattttttgtt 3457019  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctattt 204  Q
    ||||||| | |||||||||||||||||||||| | |||||||||||||    
T  3457020 ttctttcctttgtttttgtgatttcgtcgtctctaaacgactctattt 3457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 13702123 - 13701969
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||| |||||| ||||||| | |||||| | ||||||||||||||||| ||||    
T  13702123 agaggggtgatttagggtcaattttgacccaaaagtcaccccttc-gaattatttttctttctatcataattgaataagtgatttcacatattttctgtt 13702025  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| | ||||||||||||||||||||| |||||| ||||| |||||||||||    
T  13702024 ttctttcatttgtttttgtgatttcgtcgtcattgaacaactctgtttgttttgat 13701969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 30156432 - 30156278
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||||| | |||||||||||||||||||| |    
T  30156432 agaggggtgatttagggtcaattttgacccaaaaatca-cccctccgaattg-ttttccttttatcctaattgaataagtgatttcacatattttatgat 30156335  T
Q  157 ttctttcg-tatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||| | ||||||| |||||||||| ||| ||||||||| | |||||||||||    
T  30156334 ttctttcgttttgtttttatgatttcgtcttctctgaacgactttgtttgttttgat 30156278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 34961009 - 34960879
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||| || |||||| | ||||||||||||||||||||||    
T  34961009 agaggggtgacttagggtcaattttgacccaaaaatcacccc-tcagaattgttttttcttctattctaattgaataagtgatttcacatattttatgtt 34960911  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    ||||||||| ||||||||||||||| ||||||    
T  34960910 ttctttcgtttgtttttgtgatttcatcgtct 34960879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 75 - 212
Target Start/End: Original strand, 22484961 - 22485097
Alignment:
Q  75 caattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttg 174  Q
    ||||||||||||||||||||| |  |||| |||||||||||||||||||| |||||| | |||||||| |||||||| ||||||||||||| ||||||||    
T  22484961 caattttgacccaaaaatcactct-tccggattgtttttccttctatcctaattgaataagtgatttcgcatattttctgttttctttcgtttgtttttg 22485059  T
Q  175 tgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  22485060 tgatttcgtcatctttgaacgactctgtttgttttgat 22485097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 36624845 - 36624703
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||| |||||||||  |||||||||||||||||  ||||||||||||||||||||||||| | | || | ||||||||||||||||| ||||    
T  36624845 agaggggtgattcagggtcaatcatgacccaaaaatcaccca-tccgaattgtttttccttctatcctaactaaataagtgatttcacatattttctgtt 36624747  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactct 200  Q
    |||||| || |||||||||||||||||||||| |||||||||||    
T  36624746 ttcttttgtttgtttttgtgatttcgtcgtctctgaacgactct 36624703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 40013421 - 40013269
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctg---attgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||| |||||||||||||||||||||||||  || ||||||||||||||||||||||    |||||| | ||||||||||||||||| ||||||    
T  40013421 ggtgatttagtgtcaattttgacccaaaaatcacccattc-gaattgtttttccttctatcctcctaattgaataagtgatttcacatattttctgtttt 40013323  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| |||||||||||||||||||||| ||||| ||||  |||||||||||    
T  40013322 ctttcgtttgtttttgtgatttcgtcgtctctgaacaactccgtttgttttgat 40013269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 54239167 - 54239015
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||| ||| || ||||| | ||||||||| |  ||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||    
T  54239167 aggggtgatttaaggttaaatttgatcaaaaaatcacaca-tccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt 54239069  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| |||||||||||||||||||||  ||||||||| | |||||||||||    
T  54239068 ctttcgtttgtttttgtgatttcgtcgtcgatgaacgactttgtttgttttgat 54239015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 49628239 - 49628108
Alignment:
Q  57 agaggggtgattta-gggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    |||||||||||||  ||||||||||||||| |||||||||||| || ||||||||||||||||||||||  ||||| | ||||||||||||||||| |||    
T  49628239 agaggggtgatttttgggtcaattttgacctaaaaatcacccc-tctgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgt 49628141  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    |||||||||| ||||||||||||||||||||||    
T  49628140 tttctttcgtttgtttttgtgatttcgtcgtct 49628108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 38527241 - 38527395
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||| ||||| |||| ||||||||||| |  ||| ||||||||||||||||||| | |||||| |  |||||||||||||||| ||||    
T  38527241 agaggggtgatttaggatcaatcttgaaccaaaaatcacaca-tccaaattgtttttccttctatcttaattgaataaatgatttcacatattttctgtt 38527339  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||| |||||||||||||| |||| |||||| |||||||||||    
T  38527340 ttctttcgtttgtttttatgatttcgtcgtctctgaatgactctgtttgttttgat 38527395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 48400877 - 48401007
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||||| |||  || || | ||||||||||||||||| ||||    
T  48400877 agaggggtgatttagggtcaattttgacccaaaaatcacaca-tcggaattgtttttccttctaccctattttaataagtgatttcacatattttttgtt 48400975  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    ||||||||| ||||||||||||||||||||||    
T  48400976 ttctttcgtttgtttttgtgatttcgtcgtct 48401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 55090734 - 55090580
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||| |||||  |||||||||||||||| ||||| ||||||||||||||| | | ||| || | ||||||||||||||||| ||||    
T  55090734 agaggggtgatttagggttaatttcaacccaaaaatcacccc-tccgatttgtttttccttctaccttaattaaataagtgatttcacatattttctgtt 55090636  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| | ||||||||||||| |||||||| ||||||||| | |||||||||||    
T  55090635 ttctttcatttgtttttgtgattccgtcgtctctgaacgactttgtttgttttgat 55090580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 39610182 - 39610344
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt--------ccttctatcctgattgaacatgtgatttcacatat 148  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||        ||||||||||| |||||| | ||||||||||||||    
T  39610182 agaggggtgatttatggtcaattttgacccaataatcacccc-tccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacatat 39610280  T
Q  149 tttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| ||||| ||||||| |||||||||||||| |||||||||||| |||||| |||||||||||    
T  39610281 tttttgtttcctttcgtttgtttttgtgattttgtcgtctttgaatgactctgtttgttttgat 39610344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 4206662 - 4206522
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| |||||||||||| | |||||||||||| |||||||||||||||| | |||||| |||||| | ||| ||||||||||||| | ||    
T  4206662 agaggggtgatttatggtcaattttgatcaaaaaatcacccc-tccgaattgtttttccatatatcctaattgaataagtgttttcacatattttttatt 4206564  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgact 198  Q
    |||||| || |||||||||||||||||||||| |||||||||    
T  4206563 ttcttttgtttgtttttgtgatttcgtcgtctctgaacgact 4206522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 41868442 - 41868291
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattg-tttttccttctatcctgattgaacatgtgatttcacatattttatgttttc 159  Q
    |||||||||||| | |||||||| |||||||||| | | || || ||| |||||||||||||||| |||||| | ||||||||||||||||| |||||||    
T  41868442 gggtgatttaggataaattttgatccaaaaatca-ctcatctgagttgttttttccttctatcctaattgaataagtgatttcacatattttctgttttc 41868344  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| || ||||||||||||||||||| | |||||||||||||||||||||    
T  41868343 tttcgtttgcttttgtgatttcgtcgtctctaaacgactctatttgttttgat 41868291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 19645203 - 19645353
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||||||||||||||||| ||||| || ||  |||||||||||||| ||||| |||| ||| || | ||||||||||||||||| |||||| |    
T  19645203 gggtgatttagggtcaattttgacctaaaaaccatcca-tccgaattgttttttcttctgtcctaattaaataagtgatttcacatattttctgtttttt 19645301  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| | ||||||||||||| |||||||| ||||||||||| |||||||||||    
T  19645302 ttcctttgtttttgtgattacgtcgtctctgaacgactctgtttgttttgat 19645353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 40884018 - 40883877
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt-ccttctatcctgattgaacatgtgatttcacatattttatgttt 157  Q
    |||||||||||||||||||||||||||||||||||| |   || ||||||||||| |||| |||||| |||||| | |||||||||| |||||| |||||    
T  40884018 aggggtgatttagggtcaattttgacccaaaaatcatcaattc-gaattgttttttccttttatcctaattgaataagtgatttcacttattttctgttt 40883920  T
Q  158 tctttcgtatgtttttgtgatttcgtcgtctttgaacgactct 200  Q
    |||||||| |||||||||||||||||||| | |||||||||||    
T  40883919 tctttcgtttgtttttgtgatttcgtcgtttctgaacgactct 40883877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 1075044 - 1074891
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||| ||| || |||||| | |||| ||||||  |||| ||||    
T  1075044 agaggggtgatttatggtcaattttgacccaaaaatca-cccatccgagttgtttttccttatattctaattgaataagtga-ttcacacgttttctgtt 1074947  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||| ||||||| ||||||| | ||||||||| ||| |||||||    
T  1074946 ttctttcgtttgttttcgtgattttgtcgtctcttaacgactctgtttcttttgat 1074891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 24483824 - 24483679
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctt 161  Q
    |||||||| | |||||||||||| || |||||||||  || |||||||||||| ||||||| | |||||| | ||||||||||||||||| ||||||| |    
T  24483824 ggtgatttggagtcaattttgacacacaaatcaccca-tctgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcat 24483726  T
Q  162 tcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttt 208  Q
     | | |||||||||||||| ||||||| ||||||||||| |||||||    
T  24483725 acatttgtttttgtgattttgtcgtctctgaacgactctgtttgttt 24483679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 106187 - 106032
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgattt-cacatattttatgt 155  Q
    |||||||||||||||||||||||| || |||||| ||||||||  ||  ||||||||| ||||| ||| ||| || | ||||||| ||||||||||  ||    
T  106187 agaggggtgatttagggtcaatttcgatccaaaa-tcacccccatcgggttgtttttcattctaccctaattaaataagtgattttcacatatttttagt 106089  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||| |||||||||||||| ||||||| || |||||||| ||| |||||||    
T  106088 tttctttcgtttgtttttgtgattttgtcgtctctgcacgactctgtttattttgat 106032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 27189545 - 27189414
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatg-t 155  Q
    ||||||||||||||| ||||||||||| |||||||| || |  ||||||||||||||||||||||||| |||||| | || |||||||||| ||| || |    
T  27189545 agaggggtgatttagagtcaattttgatccaaaaattactct-tccgaattgtttttccttctatcctaattgaataagtaatttcacataatttctgtt 27189447  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    ||| |||| | ||||||||||||||| ||||||    
T  27189446 tttttttcatttgtttttgtgatttcatcgtct 27189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 19861428 - 19861276
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| ||||||||||||||||||||||| ||||||||||||     || |||||| ||||||  || | |||||| | ||||||||||||||||  ||||    
T  19861428 agagaggtgatttagggtcaattttgactcaaaaatcacccat---gagttgtttgtccttcc-tcataattgaataagtgatttcacatatttcctgtt 19861333  T
Q  157 ttcttt-cgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||| ||| |||||||||||||||||||||| | ||||||||| |||||||||||    
T  19861332 tttttttcgtttgtttttgtgatttcgtcgtctcttaacgactctgtttgttttgat 19861276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 34103800 - 34103718
Alignment:
Q  126 attgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttt 208  Q
    |||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||    
T  34103800 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtccttgaatgactctgtttgttt 34103718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 53402614 - 53402753
Alignment:
Q  63 gtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttcttt 162  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| || ||| || | |||         ||||| || |||||||    
T  53402614 gtgatttaaggtcaattttgacccaaaaatca-cccatccgaattgtttttccttctattctaattcaataagtg---------attttctgctttcttt 53402703  T
Q  163 cgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| ||||||||||||||| |||||| ||||||||| | |||||||||||    
T  53402704 cgtttgtttttgtgatttcatcgtctctgaacgactttgtttgttttgat 53402753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 33637423 - 33637535
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    ||||| ||||||||||||||| | | |||||| |   ||||||||||||||| ||||||||||||| | |||||||||||||||||||| | |||||||     
T  33637423 tccgatttgtttttccttctaccttaattgaataaaagatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtctctaaacgactt 33637522  T
Q  200 tatttgttttgat 212  Q
    | |||||||||||    
T  33637523 tgtttgttttgat 33637535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 2147756 - 2147859
Alignment:
Q  110 ttttccttctatcctgattgaacatgtgatttc-acatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttt 208  Q
    ||||| ||||||||| |||||| | |||||||| |||||||||  |||||||||| | |||||||||||||||||||||| || |||||||| |||||||    
T  2147756 ttttcgttctatcctaattgaataagtgatttccacatattttcagttttctttcatttgtttttgtgatttcgtcgtctctgcacgactctgtttgttt 2147855  T
Q  209 tgat 212  Q
    ||||    
T  2147856 tgat 2147859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 55454922 - 55454998
Alignment:
Q  136 tgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||||| | ||||||||||| |||||||||||| ||||||||| | ||||||||| |||||||||||    
T  55454922 tgatttcacatattttttattttctttcgtttgtttttgtgatatcgtcgtctctaaacgactctgtttgttttgat 55454998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 4817943 - 4817867
Alignment:
Q  96 cccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttt 172  Q
    ||||||| ||||||||||| || |||||| |||||| | ||||||||||||||||| | ||||||||||| ||||||    
T  4817943 cccctccaaattgtttttctttttatcctaattgaataggtgatttcacatattttctattttctttcgtttgtttt 4817867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 39429637 - 39429499
Alignment:
Q  71 gggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttat-gttttctttcgtatg 168  Q
    |||| ||||||||||||||| ||||||  || ||||||||||||||||| | || |||||||| ||| |||| |||| ||||   || ||||||||| ||    
T  39429637 gggtgaattttgacccaaaa-tcaccca-tctgaattgtttttccttcttttctaattgaacaagtgctttccacatgtttttcagtcttctttcgtttg 39429540  T
Q  169 tttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||| |||||||||||||| || |||||||| ||||||||    
T  39429539 tttttttgatttcgtcgtctctgcacgactctgtttgtttt 39429499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 3312489 - 3312580
Alignment:
Q  126 attgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgatgtcca 217  Q
    |||||| | |||||||||||||||||| |||||||||||| ||||||||| ||||| || ||| || |||||||  ||| ||||||| ||||    
T  3312489 attgaataagtgatttcacatattttaagttttctttcgtttgtttttgttatttcatcatctctgcacgactcagtttcttttgatttcca 3312580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 24520714 - 24520769
Alignment:
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||| |||||||    
T  24520714 ttctttcgtttatttttgtgatttcgtcgtctttggacgactctatttattttgat 24520769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 4219239 - 4219288
Alignment:
Q  139 tttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtct 188  Q
    |||||||||||||  |||||||||||| ||||||| ||||||||||||||    
T  4219239 tttcacatattttcagttttctttcgtttgtttttatgatttcgtcgtct 4219288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 40716277 - 40716322
Alignment:
Q  167 tgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||    
T  40716277 tgtttttgcgatttcgtcgtctttgcacgactctattagttttgat 40716322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 48854889 - 48854939
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt 113  Q
    |||||||| ||||||||||| |||||||||||| ||||||||| ||||||||    
T  48854889 ggtgattttgggtcaattttaacccaaaaatca-cccctccgatttgttttt 48854939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 3961830 - 3961760
Alignment:
Q  142 cacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||  || || |||||| ||||||| ||||| |||||| |||| |||||||| |||||||||||    
T  3961830 cacatattttcagtattatttcgtttgtttttatgattacgtcgtttttgtacgactctgtttgttttgat 3961760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 54706777 - 54706815
Alignment:
Q  58 gaggggtgatttagggtcaattttgacccaaaaatcacc 96  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  54706777 gaggggtaatttaaggtcaattttgacccaaaaatcacc 54706815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 4019590 - 4019623
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaa 90  Q
    |||||||||||||||||||||||||||| |||||    
T  4019590 agaggggtgatttagggtcaattttgactcaaaa 4019623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 40702536 - 40702580
Alignment:
Q  167 tgtttttgtgatttcgtcgtctttgaacgactctatttgttttga 211  Q
    ||||| ||||||||| ||||||||| |||| ||||||||||||||    
T  40702536 tgtttatgtgatttcatcgtctttgcacgattctatttgttttga 40702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 3e-53; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 9785297 - 9785449
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |||||| | ||||||||||||||||| ||||||    
T  9785297 aggggtgatttagggtcaattttgacccaaaaatcaccccttc-gaattgtttttccttctatcttaattgaataagtgatttcacatattttttgtttt 9785395  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| || | |||||||||||||||||||| |||||||||||||||||||||||    
T  9785396 cttttgtttatttttgtgatttcgtcgtctctgaacgactctatttgttttgat 9785449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 28665051 - 28664901
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  28665051 gggtgatttagggtcaattttgaccctaaaatcacccc-tccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgttttct 28664953  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  28664952 ttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttttgat 28664901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 36579455 - 36579301
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||| | |||||| |||||||||| ||||    
T  36579455 agagggatgatttagggtcaattttgacccgaaaatcacccc-tccgaattgtttttccttctatcctagttgaataagtgattccacatattttttgtt 36579357  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  36579356 ttcttttgtttgtttttgtgatttcgtcgtctctgaacgactctatttgttttgat 36579301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 11832996 - 11833151
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||| |||     
T  11832996 agagggatgatttatggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctttcctaattgaataagtgatttcacatattttctgta 11833095  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| || || || || |||||||||||    
T  11833096 ttctttcgtttgtttttgtgatttcgtcgtctctgtacaaccctgtttgttttgat 11833151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 45457699 - 45457545
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||    
T  45457699 agaggggtgatttagggtcaattttgacgcaaaaatcactcc-tccgaattgtttttccttctatcttaattgaataagtgatttcacatattttatgtt 45457601  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||| |||||||| |||||| ||||||||| | |||||||||||    
T  45457600 ttctttcgtttgttttcgtgatttcatcgtctctgaacgactttgtttgttttgat 45457545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 46026172 - 46026018
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||| | || |||| ||||||||| ||||    
T  46026172 agaggggtgatttagggtcaattttgacccaaaaatcacaca-tccgaattgtttttccttctatcctaattgaataagttatttaacatattttttgtt 46026074  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| |||||||||||    
T  46026073 ttctttcgtttgtttttgttatttcgtcgtctctgaacgactctgtttgttttgat 46026018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 10574363 - 10574513
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| |||||| |   ||||| ||||||||| ||||||||    
T  10574363 gggtgatttagggtcaattttgactcaaaaatcacccc-tccgaattgtttttccttttatcctaattgaataaacgattttacatattttctgttttct 10574461  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  10574462 ttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgat 10574513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 42603912 - 42603758
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||| | |||||| | ||||||||||||||||| ||||    
T  42603912 agagcggtgatttatggtcaattttgactcaaaaatcacccc-tccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgtt 42603814  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| | ||||||||| |||||||||||    
T  42603813 ttctttcgtttgtttttgtgatttcgtcgtctataaacgactctgtttgttttgat 42603758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 17473863 - 17473712
Alignment:
Q  60 ggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttc 159  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||| |    
T  17473863 ggggtgatttagggtcaattttgaccaaaaaatcacccc-tccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgtttcc 17473765  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| | |||||||||||||| ||||||| |||| |||||| |||||||||||    
T  17473764 tttcatttgtttttgtgattttgtcgtctctgaatgactctgtttgttttgat 17473712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 212
Target Start/End: Original strand, 17579351 - 17579502
Alignment:
Q  60 ggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttc 159  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||| |    
T  17579351 ggggtgatttagggtcaattttgaccaaaaaatcacccc-tccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgtttcc 17579449  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||| | |||||||||||||| ||||||| |||| |||||| |||||||||||    
T  17579450 tttcatttgtttttgtgattttgtcgtctctgaatgactctgtttgttttgat 17579502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 21990639 - 21990794
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt-ccttctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||| ||||||| |||||| | |||||||||||||| || |||    
T  21990639 agaggggtgatttagggtcaattttgactgaaaaatcacccc-tccgaattgttttttcctgctatcctaattgaataagtgatttcacatatattctgt 21990737  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||| |||||||||||||||||||| | ||||||||||| |||||||||||    
T  21990738 tttctttcgtttgtttttgtgatttcgtcgtttctgaacgactctttttgttttgat 21990794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 1281276 - 1281126
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    ||||||||||||||| ||||||||| |||||||||||  ||||||||||||||| || ||| || |||||| | ||||||||||||||||| ||||||||    
T  1281276 gggtgatttagggtccattttgaccaaaaaatcaccca-tccgaattgtttttcattatattctaattgaataagtgatttcacatattttttgttttct 1281178  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  1281177 ttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 1281126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 39533114 - 39532964
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttct 160  Q
    |||||||||||||||||||||||||||||||||| | | || |||||||||||||||||||| | |||||| | ||||||||||||||||| ||||||||    
T  39533114 gggtgatttagggtcaattttgacccaaaaatcatctc-tctgaattgtttttccttctatcttaattgaataagtgatttcacatattttctgttttct 39533016  T
Q  161 ttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || || |||||| ||||||||||||||||||||||||||| || ||||||||    
T  39533015 tttgtttgttttcgtgatttcgtcgtctttgaacgactctgttagttttgat 39532964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 5684345 - 5684494
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||| |||||| | ||||||||||||||||| ||||||    
T  5684345 aggggtgatttagggtcaattttgacgcaaaaatcacctc-tccgaattgtttttcattctatcctaattgaataagtgatttcacatattttctgtttt 5684443  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||| || |||||||||||||| |||| ||||||| ||| ||||||||    
T  5684444 ctttcgtttgcttttgtgatttcgttgtctctgaacgattctgtttgtttt 5684494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 5709395 - 5709544
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||| |||||| | ||||||||||||||||| ||||||    
T  5709395 aggggtgatttagggtcaattttgacgcaaaaatcacctc-tccgaattgtttttcattctatcctaattgaataagtgatttcacatattttctgtttt 5709493  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    ||||||| || |||||||||||||| |||| ||||||| ||| ||||||||    
T  5709494 ctttcgtttgcttttgtgatttcgttgtctctgaacgattctgtttgtttt 5709544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 48304538 - 48304382
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||| |||||| | ||||||||| | ||||| ||||    
T  48304538 agaggggtgatttagggtcaattttgacccaaaaatca-cccatccgaattgcttttcctgctatcctaattgaataagtgatttcatagattttctgtt 48304440  T
Q  157 ttctttcgtatg--tttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| || ||  |||||||||||||||||||||||||||||||| |||||||||||    
T  48304439 ttctttagtttgtttttttgtgatttcgtcgtctttgaacgactctgtttgttttgat 48304382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 32740734 - 32740885
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaa-tcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttc 159  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||    
T  32740734 gggtgatttagagtcaattttgaccaaaaaaatcaccccctc-gaattgtttttccttctatcctaattgaataagtgatttcacatattttttgttttc 32740832  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||   ||||||||||||||||||||  |||||||||| |||||||||||    
T  32740833 tttcgttgatttttgtgatttcgtcgtctcagaacgactctgtttgttttgat 32740885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 45482042 - 45482196
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||| |||||||||||||||||||||||| ||||||||||| |||||  |||||||||||||||||| ||| || | ||||||||||||||||||||      
T  45482042 agaggagtgatttagggtcaattttgaccccaaaatcacccc-tccgagctgtttttccttctatcctaattaaataagtgatttcacatattttatgcg 45482140  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||| ||||||| |||||||||||||| ||||||||||| |||||||||||    
T  45482141 ttgtttcgtttgtttttatgatttcgtcgtctctgaacgactctgtttgttttgat 45482196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 22747648 - 22747497
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||||||||||||||||||||||||| ||| | ||||||| ||||||||||| |||||| | ||||||| ||||||||||||||||    
T  22747648 aggggtgatttagggtcaattttgacccaaaaatcacccc-tccaagttgtttt-ccttctatcctaattgaataagtgatttgacatattttatgtttt 22747551  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| | | |||||||||||||| ||||| || |||||||| |||||||||||    
T  22747550 ctttcatttatttttgtgatttcgccgtctctgcacgactctttttgttttgat 22747497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 10094461 - 10094573
Alignment:
Q  100 tccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactc 199  Q
    |||||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  10094461 tccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactt 10094560  T
Q  200 tatttgttttgat 212  Q
    | |||||||||||    
T  10094561 tgtttgttttgat 10094573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 17509346 - 17509193
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| |||||||||||||||||||||| |||||||||||  |||||||| ||||||||| |||||| |||||| | ||||||||||||||||| ||||    
T  17509346 agagggatgatttagggtcaattttgaccaaaaaatcaccc--tccgaattatttttccttttatcctaattgaataagtgatttcacatattttctgtt 17509249  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | ||||  | |||||||||||||| ||||||| |||| |||||| |||||||||||    
T  17509248 tcctttaatttgtttttgtgattttgtcgtctctgaatgactctgtttgttttgat 17509193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 17543868 - 17544021
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||| |||||||||||||||||||||| |||||||||||  |||||||| ||||||||| |||||| |||||| | ||||||||||||||||| ||||    
T  17543868 agagggatgatttagggtcaattttgaccaaaaaatcaccc--tccgaattatttttccttttatcctaattgaataagtgatttcacatattttctgtt 17543965  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | ||||  | |||||||||||||| ||||||| |||| |||||| |||||||||||    
T  17543966 tcctttaatttgtttttgtgattttgtcgtctctgaatgactctgtttgttttgat 17544021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 21603441 - 21603592
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||||||||||||||||||||||||| ||||| |||||| || |||||||||||||||||||||| |||||| | ||||||||||||||| | ||||    
T  21603441 agaggggtgatttagggtcaattttgacc-aaaaagcacccc-tctgaattgtttttccttctatcctaattgaataagtgatttcacatattctctgtt 21603538  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| | |||||||||||||| ||||||| |||||   |||||||||||||||    
T  21603539 ttctttcctttgtttttgtgattttgtcgtctctgaac--atctatttgttttgat 21603592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 6667373 - 6667527
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctga-ttgaacatgtgatttcacatattttatgt 155  Q
    ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| || | ||||| | ||||||||||||||||| |||    
T  6667373 agaggagtgatttagggtcaattttgacccaaaaatca-ccccaccgaattgttttttcttctattctaatttgaataagtgatttcacatattttctgt 6667471  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| ||| || ||||| |||||||||||||||| ||||| ||||| |||||||||||    
T  6667472 tttgttt-gtttgtttctgtgatttcgtcgtctctgaacaactctgtttgttttgat 6667527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 41287935 - 41288090
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaat-tgtttttccttctatcctgattgaacatgtgatttcacatattttatgt 155  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||| |   |||||||||||||||| |||||| | ||||||||||||||||| |||    
T  41287935 agaggggtgatttagggtcaattttgacccaataatca-cccatccgagtgattttttccttctatcctaattgaataggtgatttcacatattttctgt 41288033  T
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || ||||||| |||||| ||||||| ||||||| |||||||| || |||||||||||    
T  41288034 ttcctttcgtttgttttagtgattttgtcgtctctgaacgacactgtttgttttgat 41288090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 212
Target Start/End: Original strand, 2622586 - 2622724
Alignment:
Q  73 gtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttt 172  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||||| | |||||| | || |||||| ||||||| ||||||||| ||| ||||||    
T  2622586 gtcaattttgacccaaaaatcacgca-tccgaattgtttttccttctatcttaattgaataagtaatttcagatattttctgttttcttgcgtttgtttt 2622684  T
Q  173 tgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||||||||||||| | |||| |||||||||||    
T  2622685 tgtgatttcgtcgtctttgaatggctctgtttgttttgat 2622724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 42644654 - 42644804
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||||| ||||||||||| |||||||||| |  |  |||||||||||||||||||||| |||||| | ||||||||||||||| | ||||    
T  42644654 agaggggtgatttaggatcaattttgactcaaaaatcactcattt-gaattgtttttccttctatcctaattgaataagtgatttcacatattctctgtt 42644752  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||||||||||    || ||||||||||| |||||||||||    
T  42644753 ttctttcgtttgtttttgtgatttcg----ctctgaacgactctgtttgttttgat 42644804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 15674712 - 15674601
Alignment:
Q  101 ccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactct 200  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||| ||    
T  15674712 ccgaattgtttttcctcctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcatctctgaacgaccct 15674613  T
Q  201 atttgttttgat 212  Q
     |||||||||||    
T  15674612 gtttgttttgat 15674601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 27535434 - 27535587
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcac--atattttatg 154  Q
    ||||||||||||||||||||||||| | |||||||||| ||| |||||||||||||||||||||| || |||| | | ||||||||||  ||||||| ||    
T  27535434 agaggggtgatttagggtcaatttttatccaaaaatca-cccatccgaattgtttttccttctattctaattgtataagtgatttcacatatattttctg 27535532  T
Q  155 ttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    |||| |||| | |||||||||||||| ||||||| | ||||||||| ||||||||    
T  27535533 ttttatttcatttgtttttgtgattttgtcgtctctaaacgactctgtttgtttt 27535587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 3266360 - 3266520
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt------ccttctatcctgattgaacatgtgatttcacatattt 150  Q
    |||||||||||||| |||||||||||| |||| ||||| ||| ||||| ||||||||      ||||||||||| |||||| | ||||||||||||||||    
T  3266360 agaggggtgatttatggtcaattttgatccaataatcatccc-tccgagttgttttttttcttccttctatcctaattgaataagtgatttcacatattt 3266458  T
Q  151 tatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    | ||||| ||||||| | |||||||||||| ||||||| ||||||||||| |||||||||||    
T  3266459 tctgtttcctttcgtttatttttgtgattttgtcgtctctgaacgactctgtttgttttgat 3266520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 43847086 - 43847202
Alignment:
Q  96 cccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacg 195  Q
    |||||||||||||||||||||  |||||| |||||| | ||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||| ||||||    
T  43847086 cccctccgaattgtttttcctcttatcctaattgaataagtgatttcacatattttctgttttccttcgtttgttttggtgatttcgtcgtctctgaacg 43847185  T
Q  196 actctatttgttttgat 212  Q
    ||||| ||| |||||||    
T  43847186 actctgtttattttgat 43847202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 24320357 - 24320212
Alignment:
Q  66 atttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgt 165  Q
    ||||| ||||||||||||| |||||||||| |  || || ||||||||||||||||| | ||| || | ||||||||||||||||| |||||||||| ||    
T  24320357 atttaaggtcaattttgactcaaaaatcactcattc-gagttgtttttccttctatcttaatttaataagtgatttcacatattttttgttttcttttgt 24320259  T
Q  166 atgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     ||||||||||||||| |||||| || |||||||| |||||||||||    
T  24320258 ttgtttttgtgatttcatcgtctctgcacgactctgtttgttttgat 24320212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 36719680 - 36719541
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacata--ttttatgtttt 158  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||             |||||||||||||  |||| ||||||    
T  36719680 gggtgatttagggtcaattttgatccaaaaatcacccc-tccgaattgtttttctttatat-------------gtgatttcacataaattttctgtttt 36719595  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  36719594 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 36719541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 32643040 - 32643144
Alignment:
Q  108 gtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgtt 207  Q
    |||||| |||||| | | |||||||| ||||||||||||||||| |||||||||| || |||||||||||||||||||||| |||| ||||||  |||||    
T  32643040 gttttttcttctaccttaattgaacaagtgatttcacatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctgaaagactctgattgtt 32643139  T
Q  208 ttgat 212  Q
    |||||    
T  32643140 ttgat 32643144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 9720103 - 9719962
Alignment:
Q  65 gatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttcttt-c 163  Q
    |||||| ||||||||||||| |||||||       ||| |||||||||| ||| |||| | |||||| | ||||||||||||||||| |||||| ||| |    
T  9720103 gatttatggtcaattttgactcaaaaat-------tccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtttttttttc 9720011  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  9720010 gtttgtttttgtgatttcgtcatctctgaacgactctgtttgttttgat 9719962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 26161038 - 26161112
Alignment:
Q  138 atttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  26161038 atttcacatattttctgttttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgat 26161112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 21954957 - 21954807
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttc-acatattttatgttttc 159  Q
    ||||||||||||||||||||| |||||||| |||| |  ||||| ||||||||| ||||||||| ||| || |  ||||||| ||||||| |  ||||||    
T  21954957 gggtgatttagggtcaattttaacccaaaa-tcactca-tccgagttgtttttcattctatcctaattaaataaatgatttccacatattgtcagttttc 21954860  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| |||||||||||||||||||||| || |||| | | |||||||||||    
T  21954859 tttcgtctgtttttgtgatttcgtcgtctctgcacgattgtgtttgttttgat 21954807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 4621501 - 4621356
Alignment:
Q  66 atttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgt 165  Q
    |||||| ||||||||||||| ||||||||| |  || || ||||||||||||||| | | |||||| | | ||||||| || ||||  ||||||||||||    
T  4621501 atttagagtcaattttgacctaaaaatcactctttc-gagttgtttttccttctaccataattgaataagcgatttcatatgttttcagttttctttcgt 4621403  T
Q  166 atgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
     ||||||||||||| | || ||| || |||||||| |||||||||||    
T  4621402 ttgtttttgtgattccatcatctctgcacgactctgtttgttttgat 4621356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 14657917 - 14657810
Alignment:
Q  107 tgtttttccttctatcctgattgaacatgtgatttcacatattttat--gttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctattt 204  Q
    |||||||||||||||| | |||||| | || ||||||||||| || |  ||||||||| || |||||||||||||||||||||| || |||||||| |||    
T  14657917 tgtttttccttctatcttaattgaataagttatttcacatatattttcagttttcttttgtttgtttttgtgatttcgtcgtctctgcacgactctgttt 14657818  T
Q  205 gttttgat 212  Q
     |||||||    
T  14657817 cttttgat 14657810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 40761567 - 40761626
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttcctt 117  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  40761567 agagggatgatttagggtcaattttgacccaaaaatca-cccctccgaactgtttttcctt 40761626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 37376175 - 37376020
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttca------catattttatg 154  Q
    |||||||||||| | ||||||||| |||| |||||||| || ||||| |||||||||||||| | |||||| | ||| |||||      |||||||| |     
T  37376175 gggtgatttaggataaattttgactcaaagatcaccccttc-gaattatttttccttctatc-taattgaataagtggtttcagtttctcatattttcta 37376078  T
Q  155 ttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||| ||||| |||||||| |||||||  ||| |||||| |||||||||||    
T  37376077 ttttctttcgtttgtttatgtgattttgtcgtctcagaatgactctgtttgttttgat 37376020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 39707272 - 39707398
Alignment:
Q  61 gggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgattt-cacatattttatgttttc 159  Q
    |||||||||||||||||||||||||| |||||||  | |||||| ||||||||| ||||||||| ||| || | || |||| ||  ||||||   |||||    
T  39707272 gggtgatttagggtcaattttgaccc-aaaatca-tcactccgagttgtttttctttctatcctaattaaataagttatttccatgtattttcacttttc 39707369  T
Q  160 tttcgtatgtttttgtgatttcgtcgtct 188  Q
     ||||| ||||||||||||||||||||||    
T  39707370 attcgtttgtttttgtgatttcgtcgtct 39707398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 15017421 - 15017365
Alignment:
Q  156 tttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| || ||||||||||||||||| |||| ||||||||||| |||||||||||    
T  15017421 tttcttttgtttgtttttgtgatttcgttgtctctgaacgactctgtttgttttgat 15017365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 24988497 - 24988443
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgttttt 113  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||    
T  24988497 agaggggtgattcagggtcaattttgaccc-aaaatca-cccctccgagttgttttt 24988443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 36253019 - 36253059
Alignment:
Q  169 tttttgtgatttcgtcgtctttgaacgactctatttgtttt 209  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  36253019 tttttgtgatttcgtcgtctctgaacgactctgtttgtttt 36253059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 17223134 - 17223229
Alignment:
Q  111 tttccttctatcctgattgaacatgtgattt-cacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttg 205  Q
    ||||||||||| || |||||| ||| | ||| ||||||||||  | |||||||||| |||||||||||||| || ||||||| |||| ||| ||||    
T  17223134 tttccttctatactaattgaatatgcgcttttcacatattttcaggtttctttcgtctgtttttgtgattttgttgtctttgcacgaatctgtttg 17223229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 43998979 - 43998940
Alignment:
Q  167 tgtttttgtgatttcgtcgtctttgaacgactctatttgt 206  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  43998979 tgtttttgtgatttcgtcgtctttgcacgactctttttgt 43998940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 33476711 - 33476641
Alignment:
Q  142 cacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||||   |||| || ||| ||||||| ||||||||||||||||| |||||| | |||||||||||    
T  33476711 cacatattttcaattttattccgtttgtttttatgatttcgtcgtctttgcacgactttttttgttttgat 33476641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 165
Target Start/End: Original strand, 40761666 - 40761696
Alignment:
Q  135 gtgatttcacatattttatgttttctttcgt 165  Q
    |||||||||||||||||||||||||||||||    
T  40761666 gtgatttcacatattttatgttttctttcgt 40761696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 15674768 - 15674735
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaa 90  Q
    ||||||||||||||||||||||||||||| ||||    
T  15674768 agaggggtgatttagggtcaattttgacctaaaa 15674735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 1229 - 1075
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||| | |||||||||||||||||  |||    
T  1229 agaggggtgatttaaggtcaattttgacccaaaaatcacccc-tgcgaattgtttttccttctaccctaattgaataagtgatttcacatattttcagtt 1131  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||    
T  1130 ttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgat 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 1 - 107
Alignment:
Q  106 ttgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttg 205  Q
    ||||||||||||||||| | |||||| | ||||||||||||||||| |||||||||| || | |||||||||||||||||||| ||||||||||| ||||    
T  1 ttgtttttccttctatcttaattgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttcgtcgtctctgaacgactctgtttg 100  T
Q  206 ttttgat 212  Q
    |||||||    
T  101 ttttgat 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 74142 - 74296
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||| |||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  74142 agaggagtgatttagaatcaattttgacccaaaaatcaccca-tccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtt 74240  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||||| ||||||||||||||  |||||||||||||||| | |||||||||||    
T  74241 ttctttcgtttgtttttgtgattttttcgtctttgaacgactttgtttgttttgat 74296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 212
Target Start/End: Original strand, 2878 - 3034
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttt--tccttctatcctgattgaacatgtgatttcacatattttatg 154  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||  |||||||||||| |||||| | ||||||||||||||||| ||    
T  2878 agaggggtgatttagggtcaattttgacccaataatcacccc-tccgagttgtttttttccttctatcctaattgaataagtgatttcacatattttctg 2976  T
Q  155 ttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||| ||||||| |||||||||||||| ||||||| |||| |||||| |||||||||||    
T  2977 tttcctttcgtttgtttttgtgattttgtcgtctatgaatgactctgtttgttttgat 3034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 212
Target Start/End: Complemental strand, 7255 - 7113
Alignment:
Q  69 tagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttcgtatg 168  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||||||||||| ||    
T  7255 tagggtccaatttgacccaaaaatcacccc-tccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttg 7157  T
Q  169 tttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||||||||||||| | ||||||||  |||||||||||    
T  7156 tttttgtgatttcgtcgtctataaacgactcggtttgttttgat 7113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 4202 - 4056
Alignment:
Q  64 tgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgttttctttc 163  Q
    ||||||||||||||||||||| |||||||||| || |  || |||| || ||||||||||| ||| || | |||||||||||||||||||||||||||||    
T  4202 tgatttagggtcaattttgacacaaaaatcactccttt-gagttgtctt-ccttctatcctaattaaataagtgatttcacatattttatgttttctttc 4105  T
Q  164 gtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    || |||||||||||||||||||||||||||||||| | |||||||||||    
T  4104 gtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgat 4056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 404401 - 404247
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    ||||||| |||||| |||||||||||| |||||||||||||  ||||||| ||||||| | ||||||| |||||| | ||||||||||||||||| ||||    
T  404401 agaggggcgatttaaggtcaattttgatccaaaaatcaccca-tccgaatagtttttcttgctatcctaattgaataagtgatttcacatattttctgtt 404303  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||| ||| |||||||||||||||||||||| | | ||||||| |||||||||||    
T  404302 ttcttccgtttgtttttgtgatttcgtcgtctctaatcgactctgtttgttttgat 404247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 2557 - 2407
Alignment:
Q  59 aggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtttt 158  Q
    |||||||||||||||||| |||||||||||||||||||| ||  || ||||||||||||||||| | || ||| | ||||||||||||||||| ||||||    
T  2557 aggggtgatttagggtcatttttgacccaaaaatcaccctct--gagttgtttttccttctatcataatcgaataagtgatttcacatattttctgtttt 2460  T
Q  159 ctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    ||||||| || |||||||||||| | |||| ||||||||||||||| |||||||    
T  2459 ctttcgtttg-ttttgtgatttctttgtctatgaacgactctatttattttgat 2407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 13392 - 13234
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttct----atcctgattgaacatgtgatttcacatatttta 152  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||  || |    ||||| |||||| | |||||||||||| ||||     
T  13392 agagaggtgatttagggtcaattttgatccaaaaatcacccc-tccgaattgtttttttttttttttatcctaattgaataagtgatttcacatcttttc 13294  T
Q  153 tgttttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||| |||||||||||    
T  13293 tgttttcttttgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgat 13234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 35065 - 35216
Alignment:
Q  62 ggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcac--atattttatgttttc 159  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| |||||| | ||||||||||  ||||||| |||||||    
T  35065 ggtgatttagggtcaattttgacccaaaaatca-cccatccgagttgtttttccttctatcctaattgaataagtgatttcacatatattttctgttttc 35163  T
Q  160 tttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttttgat 212  Q
    |||||| |||||||| |||||| || ||| | ||| | ||| |||||||||||    
T  35164 tttcgtttgtttttgcgatttcatcatctctaaacaaatctgtttgttttgat 35216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 1553 - 1702
Alignment:
Q  57 agaggggtgatttagggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctatcctgattgaacatgtgatttcacatattttatgtt 156  Q
    |||||||| ||||||| || |||||||||||||||||||| | || || || | |||||||||| | | |||||| | ||||||||||||||||||||||    
T  1553 agaggggtaatttaggttccattttgacccaaaaatcacctc-tctgattt-tgtttccttctaccataattgaataagtgatttcacatattttatgtt 1650  T
Q  157 ttctttcgtatgtttttgtgatttcgtcgtctttgaacgactctatttgttt 208  Q
    ||||||||| |||||||||||||||||||||| |||| |||| | |||||||    
T  1651 ttctttcgtttgtttttgtgatttcgtcgtctctgaaagactttgtttgttt 1702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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