View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6914_low_71 (Length: 206)

Name: NF6914_low_71
Description: NF6914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6914_low_71
NF6914_low_71
[»] chr6 (9 HSPs)
chr6 (21-176)||(15576189-15576344)
chr6 (108-189)||(1755666-1755747)
chr6 (86-189)||(16527816-16527913)
chr6 (86-175)||(30355260-30355349)
chr6 (93-189)||(15574845-15574941)
chr6 (129-177)||(12974270-12974318)
chr6 (35-86)||(13194291-13194342)
chr6 (119-189)||(12972509-12972579)
chr6 (16-85)||(6091920-6091989)
[»] chr2 (14 HSPs)
chr2 (86-178)||(21505231-21505323)
chr2 (93-189)||(28278522-28278617)
chr2 (108-165)||(32619586-32619643)
chr2 (108-189)||(39730367-39730448)
chr2 (14-86)||(31000597-31000669)
chr2 (86-177)||(35707735-35707826)
chr2 (119-189)||(32276638-32276708)
chr2 (86-177)||(25473969-25474060)
chr2 (110-177)||(18236418-18236485)
chr2 (86-168)||(1733042-1733123)
chr2 (138-188)||(29769610-29769660)
chr2 (111-189)||(31449877-31449955)
chr2 (16-84)||(28455128-28455196)
chr2 (108-160)||(31914047-31914099)
[»] chr5 (21 HSPs)
chr5 (93-189)||(17027447-17027543)
chr5 (108-189)||(11274445-11274525)
chr5 (108-185)||(24841677-24841754)
chr5 (93-177)||(25594791-25594875)
chr5 (86-169)||(17382127-17382210)
chr5 (86-177)||(30072111-30072201)
chr5 (103-178)||(22967951-22968026)
chr5 (86-153)||(24517310-24517377)
chr5 (99-153)||(22754904-22754958)
chr5 (21-86)||(11273683-11273748)
chr5 (86-169)||(12340106-12340187)
chr5 (151-189)||(12029540-12029578)
chr5 (100-177)||(22229741-22229818)
chr5 (14-86)||(17768641-17768713)
chr5 (21-85)||(19571048-19571112)
chr5 (35-85)||(24518964-24519014)
chr5 (108-178)||(24846192-24846262)
chr5 (101-177)||(15205577-15205653)
chr5 (16-85)||(18451061-18451130)
chr5 (21-81)||(25682147-25682207)
chr5 (108-180)||(26070404-26070475)
[»] chr8 (23 HSPs)
chr8 (86-189)||(16052369-16052472)
chr8 (86-184)||(24120156-24120254)
chr8 (94-184)||(28252481-28252571)
chr8 (86-189)||(13082029-13082132)
chr8 (86-167)||(12956431-12956512)
chr8 (86-167)||(14977199-14977280)
chr8 (86-187)||(10866910-10867011)
chr8 (108-189)||(22894648-22894729)
chr8 (108-169)||(11310318-11310379)
chr8 (86-178)||(16054225-16054317)
chr8 (86-170)||(28901432-28901516)
chr8 (86-177)||(32239219-32239310)
chr8 (151-189)||(5570305-5570343)
chr8 (80-178)||(6358629-6358727)
chr8 (24-86)||(12957559-12957621)
chr8 (21-86)||(32240446-32240511)
chr8 (86-177)||(29047408-29047499)
chr8 (21-84)||(13305658-13305721)
chr8 (35-86)||(13803096-13803147)
chr8 (125-179)||(30851230-30851284)
chr8 (14-59)||(26853601-26853646)
chr8 (125-189)||(29291691-29291755)
chr8 (109-161)||(30543711-30543763)
[»] chr3 (15 HSPs)
chr3 (94-177)||(25919564-25919647)
chr3 (86-177)||(17637035-17637126)
chr3 (87-189)||(21017796-21017899)
chr3 (111-189)||(13911185-13911263)
chr3 (137-189)||(8402693-8402745)
chr3 (86-146)||(33914654-33914714)
chr3 (94-168)||(12573231-12573305)
chr3 (94-168)||(13549695-13549769)
chr3 (108-173)||(16970177-16970241)
chr3 (100-177)||(19219317-19219394)
chr3 (16-80)||(10343000-10343064)
chr3 (110-177)||(18065761-18065828)
chr3 (88-177)||(1475374-1475463)
chr3 (108-174)||(31477705-31477771)
chr3 (21-82)||(33913400-33913461)
[»] chr1 (22 HSPs)
chr1 (86-189)||(23223331-23223434)
chr1 (100-189)||(21451921-21452010)
chr1 (86-177)||(50047113-50047204)
chr1 (100-177)||(12424020-12424097)
chr1 (86-181)||(30675411-30675507)
chr1 (86-165)||(26657420-26657499)
chr1 (14-85)||(50048239-50048310)
chr1 (93-178)||(11770093-11770178)
chr1 (93-177)||(25730670-25730754)
chr1 (95-176)||(25777932-25778013)
chr1 (86-177)||(12810256-12810345)
chr1 (109-161)||(34935297-34935349)
chr1 (112-154)||(25266462-25266504)
chr1 (16-86)||(34522115-34522185)
chr1 (93-177)||(8247756-8247840)
chr1 (108-165)||(25965488-25965545)
chr1 (119-179)||(26101987-26102047)
chr1 (137-180)||(15299012-15299055)
chr1 (21-83)||(17836791-17836853)
chr1 (16-94)||(23224619-23224697)
chr1 (21-83)||(30676667-30676729)
chr1 (21-85)||(27682929-27682993)
[»] chr7 (26 HSPs)
chr7 (86-177)||(29544451-29544542)
chr7 (86-189)||(20470902-20471005)
chr7 (81-177)||(2632523-2632619)
chr7 (108-177)||(7142030-7142099)
chr7 (93-189)||(21471717-21471813)
chr7 (100-189)||(7494631-7494720)
chr7 (125-187)||(9761537-9761598)
chr7 (125-187)||(9801996-9802057)
chr7 (16-86)||(21544679-21544749)
chr7 (111-175)||(2353357-2353421)
chr7 (86-177)||(20446171-20446262)
chr7 (85-177)||(23124833-23124924)
chr7 (14-85)||(7494484-7494555)
chr7 (119-176)||(18496498-18496555)
chr7 (125-177)||(21545929-21545984)
chr7 (18-86)||(7143571-7143639)
chr7 (14-86)||(7776350-7776422)
chr7 (21-80)||(9071392-9071451)
chr7 (14-85)||(18494555-18494626)
chr7 (35-90)||(21473039-21473094)
chr7 (135-189)||(3269123-3269177)
chr7 (100-165)||(7815267-7815332)
chr7 (135-181)||(22532784-22532830)
chr7 (18-59)||(7152116-7152157)
chr7 (24-85)||(14074486-14074547)
chr7 (24-85)||(14384514-14384575)
[»] chr4 (20 HSPs)
chr4 (102-189)||(1676403-1676490)
chr4 (102-189)||(1682931-1683018)
chr4 (100-175)||(15192137-15192212)
chr4 (86-161)||(34864383-34864458)
chr4 (110-174)||(12111446-12111510)
chr4 (108-179)||(18897921-18897992)
chr4 (93-178)||(5906819-5906905)
chr4 (15-85)||(47023552-47023622)
chr4 (125-189)||(10576373-10576437)
chr4 (23-86)||(20717941-20718004)
chr4 (115-177)||(9288142-9288204)
chr4 (22-86)||(12840697-12840761)
chr4 (21-85)||(22219945-22220009)
chr4 (86-177)||(25315323-25315414)
chr4 (16-59)||(24580004-24580047)
chr4 (93-156)||(25050164-25050227)
chr4 (24-75)||(30797703-30797754)
chr4 (100-189)||(1696675-1696762)
chr4 (125-169)||(10320350-10320394)
chr4 (108-176)||(17339927-17339995)
[»] scaffold0171 (3 HSPs)
scaffold0171 (100-177)||(6128-6205)
scaffold0171 (13-85)||(7349-7421)
scaffold0171 (108-170)||(21336-21398)
[»] scaffold0386 (2 HSPs)
scaffold0386 (101-177)||(8816-8892)
scaffold0386 (93-162)||(13170-13239)
[»] scaffold0002 (1 HSPs)
scaffold0002 (100-177)||(446937-447014)
[»] scaffold0188 (1 HSPs)
scaffold0188 (108-168)||(27068-27128)
[»] scaffold0282 (1 HSPs)
scaffold0282 (110-189)||(22661-22740)


Alignment Details
Target: chr6 (Bit Score: 128; Significance: 2e-66; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 15576189 - 15576344
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaacaactactctaattctcatcctatttgtctttaa 120  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15576189 agaacgataaactgactactttattacttgttacgatttgatgcacttgccaatttcgtccatcaacaactcctctaattctcatcctatttgtctttaa 15576288  T
Q  121 attcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  15576289 attcaaagaaaagtactaaaaacatagccaaaaatatcatatgatgctccatcatc 15576344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 1755666 - 1755747
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||||||| ||||||||||||||  |||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  1755666 tatttgtcttcaaattcaaagaaaataactaaaaacataacctgatatatcatatgatgctccgtcatcacaaccccaaact 1755747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 16527913 - 16527816
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||| ||||||| ||||||||||      ||||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||    
T  16527913 acaactcctctaactctcatcttatttgtctt------caaagaaaagtactaaaaacatagccaaaaatattatatgatgctctgccatcacaacccca 16527820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 30355349 - 30355260
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcat 175  Q
    |||||| |||||| ||||||| |||||  ||| |||| |||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  30355349 acaacttctctaactctcatcttatttaccttcaaatgcaagtaaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcat 30355260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 15574941 - 15574845
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||| ||||||| |||||||||| |||| ||||||||| ||||||| || ||| |||||| | |||||||||| || ||||||| |||||||||||    
T  15574941 ctctaaatctcatcttatttgtcttcaaatgcaaagaaaaagtactaacaagatagccaaaa-tgtcatatgatgttctgtcatcataaccccaaact 15574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 12974318 - 12974270
Alignment:
Q  129 aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  12974318 aaaagtactaaaaccatagcaaaaaatatcatatgatgctccgtcatca 12974270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 13194291 - 13194342
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||||||||||||||||||||  || |||||| |||||||||||||||    
T  13194291 actactttattacttgttacgatttggtgcacttgccaatttcgtccatcaa 13194342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 12972509 - 12972579
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||| |||||||||  |||||||||||| |||||||||||| |||||| ||  ||||||| ||||||||||    
T  12972509 aaatgcaaagaaaataactaaaaacatagccaaaaatatcaaatgatgttctatcatcactaccccaaact 12972579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 6091989 - 6091920
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||| |||||||||| ||  ||||||||||| || ||||||||| ||| |||||  ||||||||||||||    
T  6091989 tgtggagaacgataaactttctactttattattttttacgatttaatgcacttgtcaatttcgtccatca 6091920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 21505231 - 21505323
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    ||||||||||||| ||||||| |||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  21505231 acaactactctaactctcatcttatttgtcttcaaatgcaaagaaaaatactaaaaacatagccaaaaatatcatatgatgctccgtcatcac 21505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 28278522 - 28278617
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||| |||| || |||||| ||| |||| |||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||| |||||    
T  28278522 ctctaactctcttcttatttgccttcaaatgcaaagaaaagtactaaaa-catagcaaaaaatatcatatgatgctctgtcatcacaacccaaaact 28278617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 32619643 - 32619586
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    |||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  32619643 tatttgtcttcaaatgcaaagaaaagtactaaaaatatagccaaaaatatcatatgat 32619586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 39730448 - 39730367
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||||||| || |  ||||||||  |||||||||||| || ||||||| ||||||||||||| |||||||||||||||||    
T  39730448 tatttgtcttcaattataaagaaaataactaaaaacatagcctaaaatattatatgatgctccgccatcacaaccccaaact 39730367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 31000597 - 31000669
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||| |||| ||||| || |||||||||||||||||||| |||| ||| |||||| |||||||||||||||    
T  31000597 cctgtggagaatgataaacttactactttattacttgttacaatttgatgcacttgcaaatttcgtccatcaa 31000669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 35707826 - 35707735
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||| ||||||||||||||  ||||| | ||||||||||||| |||||||    
T  35707826 acaacttctctaactctcatcttatttgtcttcaaatacaaagaaaaagtactaaaaacatagtcaaaa-tgtcatatgatgctctgtcatca 35707735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 32276638 - 32276708
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||| |||||||||  |||||||||||| |||||| || ||||||||| ||| ||||||||||||||||||    
T  32276638 aaatgcaaagaaaataactaaaaacatatccaaaagtaccatatgatgttccttcatcacaaccccaaact 32276708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 25474060 - 25473969
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| |||||||||| ||||  ||| |||| |||||||||||||| |||||| | ||||||||||||| |||||||    
T  25474060 acaactcctctaactctcatcttatttgtcttcaaatgaaaataaaatgtactaaaaacatagccaaaa-tgtcatatgatgctctgtcatca 25473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 18236418 - 18236485
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||| ||| |||| |||||||||  |||||||||||| |  |||||||||||||||||||||||||||    
T  18236418 tttgccttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgctccgtcatca 18236485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 1733123 - 1733042
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    |||||| |||||| |||||||  ||||||||| ||||  ||| ||||||||||||||||||| | ||||| ||||||||||||    
T  1733123 acaactcctctaactctcatctcatttgtcttcaaatgaaaaaaaaagtactaaaaacataa-ctaaaatgtcatatgatgct 1733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 29769660 - 29769610
Alignment:
Q  138 aaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaac 188  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||||||||    
T  29769660 aaaaacatagcctaaaatattatatgatgctccgtcatcataaccccaaac 29769610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 31449955 - 31449877
Alignment:
Q  111 ttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||| |||| |||| ||||  |||||||||||| |  ||||||||||| ||| |||| ||||||||||||||||||    
T  31449955 ttgtcttcaaatgcaaataaaataactaaaaacatagcttaaaatatcataagatactccatcatcacaaccccaaact 31449877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 28455196 - 28455128
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatc 84  Q
    |||| ||||| |||| || ||||||||| ||||||||| |||||  || |||||| |||||||||||||    
T  28455196 tgtggagaaccataaacttactactttaatacttgttatgatttggtgtacttgccaatttcgtccatc 28455128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 31914047 - 31914099
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcat 160  Q
    |||||||||| |||| ||||||||| ||||||||||||| | |||||| ||||    
T  31914047 tatttgtcttcaaatgcaaagaaaaatactaaaaacatagcaaaaaatgtcat 31914099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 9e-29; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 17027543 - 17027447
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||| ||||||| || |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||||||||||    
T  17027543 ctctaactctcatcttaattgtctttaaatgcaaagaaaagtactaaaaacatagccaaaaatgtcatatgatgctccctcgtcacaaccccaaact 17027447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 11274445 - 11274525
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||| |||||||||| ||||||||||||||||||| ||| | |||||||||| |||||||||| ||||||||||||||||||    
T  11274445 tattggtctttaaatgcaaagaaaagtactaaaaa-atagcaaaaaatatcaaatgatgctccttcatcacaaccccaaact 11274525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 24841754 - 24841677
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||||||| |||| ||||||| ||||||||||||||| | |||||| ||||||||||||| |||||||||||||||    
T  24841754 tatttgtcttcaaatgcaaagaatagtactaaaaacatagcaaaaaatgtcatatgatgctctgtcatcacaacccca 24841677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 25594791 - 25594875
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| |||||||||| |||| |||| |||||||||||||||||| |||||||||  ||||||||||| |||||||    
T  25594791 ctctaactctcatcttatttgtcttcaaatgcaaataaaagtactaaaaacatagccaaaaataatatatgatgctctgtcatca 25594875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 17382127 - 17382210
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctc 169  Q
    |||||| |||||| ||||||| |||||||||| |||| |||| |||||||||||| ||||| | ||||||||||||||||||||    
T  17382127 acaactcctctaactctcatcttatttgtcttcaaatgcaaaaaaaagtactaaacacatagcaaaaaatatcatatgatgctc 17382210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 30072201 - 30072111
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||||||||||| |||||||||| |||| |||||||||||||| |||||||| || |||||| || |||||| ||||||||||    
T  30072201 acaactcctctaattctcatcttatttgtcttcaaatccaaagaaaagtacttaaaacatagcc-aaaataacacatgatgttccgtcatca 30072111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 22967951 - 22968026
Alignment:
Q  103 catcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||| |||||||||| | || ||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||    
T  22967951 catcttatttgtcttaacatgcaaagaaaactactaaaaacatagcctaaaatatcatatgatactccgtcatcac 22968026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 24517377 - 24517310
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaa 153  Q
    |||||| |||||||||||||| |||||||||| |||| ||||| |||| |||||||||||||| ||||    
T  24517377 acaactcctctaattctcatcttatttgtcttcaaatgcaaagcaaagaactaaaaacataactaaaa 24517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 22754958 - 22754904
Alignment:
Q  99 ttctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaa 153  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||| ||||||    
T  22754958 ttctcatcttatttgtctttaaatgcaaagaaacgtactaaaaacatatccaaaa 22754904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 11273748 - 11273683
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||||| || |||||||||||||||||||| |||| ||| |||||| ||||| |||||||||    
T  11273748 agaacgataaacttactactttattacttgttacaatttgatgcacttgccaattttgtccatcaa 11273683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 12340106 - 12340187
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctc 169  Q
    |||||| |||||| ||||| | |||||||||| |||| ||||||||| ||||||||||||| || ||||| |||||||||||||    
T  12340106 acaactcctctaactctcaccttatttgtcttcaaatgcaaagaaaa-tactaaaaacatagcc-aaaatgtcatatgatgctc 12340187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 12029578 - 12029540
Alignment:
Q  151 aaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  12029578 aaaatatcatatgatgctcggtcatcacaaccccaaact 12029540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 22229818 - 22229741
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtacta-aaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||||||| |||| ||||||||||||||| |||||||| || |||||  |||||||||||| |||||||    
T  22229818 tctcatcttatttgtcttcaaatgcaaagaaaagtactaaaaaacatagcc-aaaatgacatatgatgctctgtcatca 22229741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 17768641 - 17768713
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||| ||||| |||| || ||||||||||||||| |||||||||  |  |||||| |||||||||||||||    
T  17768641 cctgtggagaacaataaacttactactttattacttcttacgatttggtttacttgccaatttcgtccatcaa 17768713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 19571048 - 19571112
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||||||| || |||||||||||| ||||||||||||  || |||||| ||||| ||||||||    
T  19571048 agaacgataaacttactactttattatttgttacgatttggtgcacttgcaaatttagtccatca 19571112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 24518964 - 24519014
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||||||||||||||||||||| ||  |||||| | ||||||||||||    
T  24518964 actactttattacttgttacgatttgatacacttgccagtttcgtccatca 24519014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 24846262 - 24846192
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||||||||| |||| ||||||||   |||||||| ||| || |||| ||||||| |||||||||||||||    
T  24846262 tatttgtcttcaaatgcaaagaaagtaactaaaaatatagcctaaaacatcatatcatgctccgtcatcac 24846192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 15205653 - 15205577
Alignment:
Q  101 ctcatcctatttgtctttaaattcaaagaaaag-tactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| ||||||| |||| ||||  |||||||||||||  ||||| ||||||||||||||| |||||||    
T  15205653 ctcatcttatttgtatttaaatgcaaataaaaaatactaaaaacatagtcaaaa-tatcatatgatgctctgtcatca 15205577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 18451130 - 18451061
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||| |||||||||| || || |||||||||||||||||||| |  |  |||||| ||||||||||||||    
T  18451130 tgtggagaacgataaacttacaactttattacttgttacgatctggtccacttgccaatttcgtccatca 18451061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 25682147 - 25682207
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtcc 81  Q
    ||||||||||  | |||| ||||||||||||||||||||  || |||||| ||||||||||    
T  25682147 agaacgataaaattactattttattacttgttacgatttagtgcacttgccaatttcgtcc 25682207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 26070475 - 26070404
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaa 180  Q
    |||||| ||| |||| |||||||||  |||||||||||| ||||||| ||||||||||| ||| |||| ||||    
T  26070475 tatttgccttaaaatgcaaagaaaataactaaaaacatagccaaaaa-atcatatgatgttccatcattacaa 26070404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 16052369 - 16052472
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||| ||||||  |||||||| | |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  16052369 acaactcctctaactctcattttatttgtcctcaaatgcaaataaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcatcacaacccta 16052468  T
Q  186 aact 189  Q
    ||||    
T  16052469 aact 16052472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 24120254 - 24120156
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccc 184  Q
    |||||| |||||| ||||||| ||||| |||| |||| ||||||||||||||||||||||| | ||||||||||||||||| | |||||||||||||||    
T  24120254 acaactcctctaactctcatcttatttctcttcaaatgcaaagaaaagtactaaaaacatagcaaaaaatatcatatgatgattcgtcatcacaacccc 24120156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 28252481 - 28252571
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccc 184  Q
    ||||| ||||||| ||||||||||||||| | || ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  28252481 tctaactctcatcttatttgtctttaaatacgaataaaagtattaaaaacataacaaaaaatatcatatgatgctccttcatcacaacccc 28252571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 13082029 - 13082132
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccc 184  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||| ||||||||||||||| ||||| | |||||||||| |  ||||||||||||||    
T  13082029 acaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaaagtactaaaaacataatcaaaa-tgtcatatgatgttttgtcatcacaacccc 13082127  T
Q  185 aaact 189  Q
    |||||    
T  13082128 aaact 13082132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 12956512 - 12956431
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgc 167  Q
    |||||| |||||| ||||||| ||||| |||| |||| |||||||||||||||||||||||  ||||||||||| |||||||    
T  12956512 acaactcctctaactctcatcttatttatcttcaaatgcaaagaaaagtactaaaaacatagacaaaaatatcacatgatgc 12956431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 14977199 - 14977280
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgc 167  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||||| |||||||||||   ||||||||||||||||||    
T  14977199 acaactcctctaactctcatcttatttgtcttaaaatgcaaagaaaagtgctaaaaacatagttaaaaatatcatatgatgc 14977280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 10867011 - 10866910
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    ||||||||||||| |  | || |||||| |||  |||||||||||||  ||||||| |||| | ||||||||||||||||| ||| ||||||||||||||    
T  10867011 acaactactctaaatgacctcttatttgccttcgaattcaaagaaaataactaaaatcataccaaaaaatatcatatgatgttccatcatcacaacccca 10866912  T
Q  186 aa 187  Q
    ||    
T  10866911 aa 10866910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 22894648 - 22894729
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||| ||| |||| | ||||||||||||||||||||| | |||||| ||||||||||||| |||||||||| | ||||||    
T  22894648 tatttggcttcaaatgcgaagaaaagtactaaaaacatacctaaaaatgtcatatgatgctctgtcatcacaatctcaaact 22894729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 11310318 - 11310379
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctc 169  Q
    ||||| |||| |||| |||||| |||||||||||||||| | ||||||||||||||||||||    
T  11310318 tatttttcttcaaatgcaaagataagtactaaaaacatagcaaaaaatatcatatgatgctc 11310379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 178
Target Start/End: Complemental strand, 16054317 - 16054225
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||||| |||||| ||| ||| |||||||||| |||| ||||||||| |||||||| ||||| |||||| | ||||||||||||| ||||||||    
T  16054317 acaactcctctaactcttatcttatttgtcttcaaatgcaaagaaaaagtactaaagacatagccaaaa-tgtcatatgatgctctgtcatcac 16054225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 28901432 - 28901516
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctcc 170  Q
    |||||| |||||  ||||| | ||||||| || |||| |||||||||||| ||||| |||| |||||||| ||||||||||||||    
T  28901432 acaactcctctatctctcaacttatttgtattcaaatgcaaagaaaagtattaaaagcatagccaaaaatttcatatgatgctcc 28901516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 32239310 - 32239219
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||||| | ||| ||| | |||| ||||  |||||||||| ||||||||||| |||||||||||||| ||||| || ||||||    
T  32239310 acaactcctctaattattatcttatctatcttcaaatgtaaagaaaagtgctaaaaacatagccaaaaatatcatacgatgcaccatcatca 32239219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 5570305 - 5570343
Alignment:
Q  151 aaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  5570305 aaaatatcatatgatgctccgttatcacaaccccaaact 5570343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 6358727 - 6358629
Alignment:
Q  80 ccatcaacaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||| ||||||| |||||  ||||| | ||| |||||| |||| |||| |||||||||||||||||| || ||||| ||||||  ||||| ||||||||    
T  6358727 ccattaacaactcctctatctctcaacttatatgtcttcaaatgcaaataaaagtactaaaaacatagcccaaaatgtcatatagtgctctgtcatcac 6358629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 12957559 - 12957621
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    ||||||| || |||||||||||||||||||||||||  || |||||  |||||||||||||||    
T  12957559 acgataagcttactactttattacttgttacgatttagtgcacttgtcaatttcgtccatcaa 12957621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 32240446 - 32240511
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||||| || |||||||||||||||||||| ||||  || |||||| ||||| |||||||||    
T  32240446 agaacgataaacttactactttattacttgttacaatttggtgcacttgccaattttgtccatcaa 32240511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 29047408 - 29047499
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| ||||||| || |||| ||||||||| ||||||| || ||| |||||  ||||||||||||||| |||||||    
T  29047408 acaactcctctaactctcatcttatttgttttcaaatgcaaagaaaaagtactaataatatagccaaat-tatcatatgatgctctgtcatca 29047499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 13305658 - 13305721
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatc 84  Q
    |||||||||| || |||||||||||||||||||| ||||   | |||||| |||||||||||||    
T  13305658 agaacgataaactaactactttattacttgttacaattttgcgcacttgccaatttcgtccatc 13305721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 13803147 - 13803096
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||| |||||||||||||||||||| ||| |||||  |||||||||||||||    
T  13803147 actattttattacttgttacgatttgatgcacttgtcaatttcgtccatcaa 13803096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 30851230 - 30851284
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcaca 179  Q
    ||||||||  |||||||||||| ||||||||||||||||| | ||| ||||||||    
T  30851230 aaagaaaataactaaaaacatagccaaaaatatcatatgacgttccatcatcaca 30851284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 26853601 - 26853646
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgattt 59  Q
    |||||| |||||||| | || |||||||||||||||||||||||||    
T  26853601 cctgtggagaacgatgaacttactactttattacttgttacgattt 26853646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 29291755 - 29291691
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||||  || ||||||||| || |||||||||||||||| ||||| |||| |||| ||||||    
T  29291755 aaagaaaataacaaaaaacatagcctaaaatatcatatgatgttccgtaatcataacctcaaact 29291691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 30543763 - 30543711
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcata 161  Q
    ||||||||| |||| |||| |||| ||||||||||||| | ||||||||||||    
T  30543763 atttgtcttcaaatgcaaaaaaaaatactaaaaacatagctaaaaatatcata 30543711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 9e-26; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 25919564 - 25919647
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  25919564 tctaactctcatcttatttgtcttcaaattcaaagaaatgtactaaaaacataaccagaaatatcatatgatgctccatcatca 25919647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 17637126 - 17637035
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||| ||||| ||| ||||||||||||| | |||||||||||| || ||||||| |||||||| |||||||||||||||||||||    
T  17637126 acaactcctcttattcttatcttatttgtctttaattacaaagaaaagtaatataaacatagccaaaaatgtcatatgatgctccgtcatca 17637035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 21017899 - 21017796
Alignment:
Q  87 caactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataac-caaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    ||||| |||||| ||||||| ||||| |||| |||| ||||||||| |||||||||||||||  |||||||||||||||||||| || ||||||||| ||    
T  21017899 caactcctctaactctcatcttatttttcttcaaatgcaaagaaaaatactaaaaacataacaaaaaaatatcatatgatgctctgttatcacaacctca 21017800  T
Q  186 aact 189  Q
    ||||    
T  21017799 aact 21017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 13911263 - 13911185
Alignment:
Q  111 ttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||| |||| ||||||||| |||||||||||||   ||||||||||| |||| ||||||||||||||||| |||||    
T  13911263 ttgtcttcaaatacaaagaaaattactaaaaacatagaaaaaaatatcatttgattctccgtcatcacaaccctaaact 13911185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 8402693 - 8402745
Alignment:
Q  137 taaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||||||  | ||||||||||||||||||| |||||||||||||||||||    
T  8402693 taaaaacatagtctaaaatatcatatgatgctctgtcatcacaaccccaaact 8402745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 33914654 - 33914714
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacata 146  Q
    |||||| || ||| ||||||| |||||||||| |||| |||||||||||||||||||||||    
T  33914654 acaactcctataactctcatcttatttgtcttgaaatgcaaagaaaagtactaaaaacata 33914714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 12573305 - 12573231
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    ||||| ||||||| ||||||||||  ||| ||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  12573305 tctaactctcatcttatttgtcttctaatgcaaagaaaaagtactaaaaacataacc-aaaatgtcatatgatgct 12573231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 13549769 - 13549695
Alignment:
Q  94 tctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    ||||| ||||||| ||||||||||  ||| ||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  13549769 tctaactctcatcttatttgtcttctaatgcaaagaaaaagtactaaaaacataacc-aaaatgtcatatgatgct 13549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 16970241 - 16970177
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtc 173  Q
    ||||||| || |||| |||||||||| ||||||||||||  ||||||||||||||| |||||||||    
T  16970241 tatttgtgttcaaatacaaagaaaagcactaaaaacatagtcaaaaatatcatatg-tgctccgtc 16970177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 19219317 - 19219394
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| ||||| |||| |||  ||||||||| ||||||||||| | | |||| |||||||||||||| ||||||||    
T  19219317 tctcatcttatttatcttcaaaagcaaagaaaaatactaaaaacacagctaaaagtatcatatgatgcttcgtcatca 19219394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 10343000 - 10343064
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtc 80  Q
    |||| |||||||||| || |||| ||||||||| ||||||||||  || ||||||||||||||||    
T  10343000 tgtggagaacgataaacttactattttattactcgttacgattttgtgcacttgctaatttcgtc 10343064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 18065828 - 18065761
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||||| ||||||| | ||| ||||||||| |||||||| ||| || |||| |||||||||    
T  18065828 tttgtctttaaatgcaaagaatattaccaaaaacatagccaaaaatgtcacataatgccccgtcatca 18065761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 1475374 - 1475463
Alignment:
Q  88 aactactctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||| |||||| ||||||| |||| | ||| |||| ||||||||| |||||||||||||| || ||||| ||||||||||||  |||||||    
T  1475374 aactcctctaactctcatcttattagacttcaaatgcaaagaaaaagtactaaaaacatagcc-aaaatgtcatatgatgctatgtcatca 1475463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 31477705 - 31477771
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtca 174  Q
    ||||||||||||||| |||||||||  |||||||||||| || || ||||||  ||||||| |||||    
T  31477705 tatttgtctttaaatacaaagaaaataactaaaaacatatcctaatatatcaagtgatgcttcgtca 31477771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 33913461 - 33913400
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtcca 82  Q
    ||||||||||  | |||||||||||||||||||| ||||  || |||||| |||||||||||    
T  33913461 agaacgataaatttactactttattacttgttacaatttggtgcacttgccaatttcgtcca 33913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 9e-26; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 23223434 - 23223331
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||| || |||| || ||||||  |||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23223434 acaactcctctaactcccatcttaattgtctcaaaatgcaaagaaaagtacttaaaacatagccaaaaacatcatatgatgctccgtcatcacaacccca 23223335  T
Q  186 aact 189  Q
    ||||    
T  23223334 aact 23223331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 21451921 - 21452010
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||| | ||||||||||||  |||||||||||||||||||    
T  21451921 tctcatcttatttgtcttcaaatgcaaagaaaacgtactaaaaacatagccaaaa-tgtcatatgatgctatgtcatcacaaccccaaact 21452010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 50047204 - 50047113
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||| || ||||| |||||||||| |||| ||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||    
T  50047204 acaactcctctacttttcatcttatttgtcttcaaatgcaaagaaaagtatcaaaaacatagccaaaaatatcatatggtattccgtcatca 50047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 12424020 - 12424097
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||    
T  12424020 tctcatcttatttgtcttcaaatgcaaagaaaaagtactaaaaacatagccaaaa-tatcatatgatgctctgtcatca 12424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 30675507 - 30675411
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaa-gaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaac 181  Q
    |||||| |||||||| ||||| |||||||||  ||||  ||| ||||||| ||||||||||| | |||||| ||||||||||||| |||||||||||    
T  30675507 acaactcctctaattttcatcttatttgtctacaaatgaaaaagaaaagttctaaaaacatagcaaaaaatgtcatatgatgctctgtcatcacaac 30675411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 26657499 - 26657420
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    |||||| |||||  ||||| | |||||||||| |||| |||||||||||| ||||||||||  |||||||||||||||||    
T  26657499 acaactcctctatctctcaacatatttgtcttcaaatgcaaagaaaagtaataaaaacatagtcaaaaatatcatatgat 26657420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 50048239 - 50048310
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||| |||||||||| || |||||||||||||||||||  |||| ||| |||||| ||||||||||||||    
T  50048239 cctgtggagaacgataaacttactactttattacttgttataatttgatgcacttgccaatttcgtccatca 50048310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 11770093 - 11770178
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcac 178  Q
    |||||| ||||||| ||||| |||| |||| ||||||| |||| ||||||||||  |||||||||||| ||||||||  |||||||    
T  11770093 ctctaactctcatcttatttatcttcaaatgcaaagaatagtattaaaaacatagacaaaaatatcatgtgatgctctatcatcac 11770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 25730670 - 25730754
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataac-caaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| ||||||| || |||| |||||||||||||| |||||||| |  |||||||||||||||||||| |||||||    
T  25730670 ctctaactctcatcttatttgttttcaaatgcaaagaaaagtact-aaaacatagcaaaaaaatatcatatgatgctctgtcatca 25730754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 25777932 - 25778013
Alignment:
Q  95 ctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||| ||||||| ||||| | || |||| |||||||||| ||||| |||||| | |||||||||||||||| ||||||||||    
T  25777932 ctaactctcatcttatttattttcaaatgcaaagaaaagcactaagaacatagcaaaaaatatcatatgatactccgtcatc 25778013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 12810345 - 12810256
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||  ||||| | |||||||||||||||  ||||||||||||||||||||||   |||||||||  |||||||| ||||||||    
T  12810345 acaactcctctatctctcaacttatttgtctttaaatataaagaaaagtactaaaaacatagtaaaaaatatc--atgatgcttcgtcatca 12810256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 34935297 - 34935349
Alignment:
Q  109 atttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcata 161  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||||||||    
T  34935297 atttgtctttaaattcaaagaaaataactaaaaacatagcctaaaatatcata 34935349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 25266462 - 25266504
Alignment:
Q  112 tgtctttaaattcaaagaaaagtactaaaaacataaccaaaaa 154  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  25266462 tgtcttcaaatgcaaagaaaagtactaaaaacataaccaaaaa 25266504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 34522115 - 34522185
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||| |||||||||| || |||| ||||||||||||||||||||  || |||||| |||||| ||||||||    
T  34522115 tgtggagaacgataaacttactattttattacttgttacgatttggtgcacttgccaatttcttccatcaa 34522185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 8247756 - 8247840
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaag-tactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||||| |||||||||| |||| |||||||||| || ||||||||||  ||||| | ||||||||||||| |||||||    
T  8247756 ctctaactctcatcttatttgtcttcaaatgcaaagaaaaggtattaaaaacatagtcaaaa-tgtcatatgatgctctgtcatca 8247840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 25965488 - 25965545
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    ||||||||||||| | |||||||||  ||||||||||||||| |||| ||||||||||    
T  25965488 tatttgtctttaagtacaaagaaaataactaaaaacataacctaaaacatcatatgat 25965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 26102047 - 26101987
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcaca 179  Q
    |||| |||||||||  |||||||||||  || |||||||||||||||||||| ||||||||    
T  26102047 aaatgcaaagaaaataactaaaaacatcgcctaaaatatcatatgatgctccatcatcaca 26101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 15299012 - 15299055
Alignment:
Q  137 taaaaacataaccaaaaatatcatatgatgctccgtcatcacaa 180  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||    
T  15299012 taaaaacataacctaaaatatcatatgatgttccatcatcacaa 15299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 17836853 - 17836791
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccat 83  Q
    |||||||||| || |||||||| |||||||||| |||||  || |||||| ||||||||||||    
T  17836853 agaacgataaacttactactttcttacttgttatgatttggtgcacttgccaatttcgtccat 17836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 23224619 - 23224697
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaacaactact 94  Q
    |||| |||| ||||| || ||||| ||||||||||||||||||| | | |||||| ||||||| |||||| ||| ||||    
T  23224619 tgtggagaatgataaacttactaccttattacttgttacgatttgacgcacttgccaatttcgcccatcaccaattact 23224697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 30676667 - 30676729
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccat 83  Q
    ||||||||||  | |||||||||||||||||||||||||  ||||||||  || |||||||||    
T  30676667 agaacgataaatttactactttattacttgttacgatttggtgaacttgtcaagttcgtccat 30676729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 27682929 - 27682993
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||| |||| || ||||||||||||||||||||| |||  || |||||  ||||||||||||||    
T  27682929 agaacaataaacttactactttattacttgttacggtttggtgcacttgtcaatttcgtccatca 27682993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 29544542 - 29544451
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||| || |||||||||| ||||||||||||||||||||||| ||||||    
T  29544542 acaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaattaataaaaacatagccaaaaatatcatatgatgctccttcatca 29544451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 20470902 - 20471005
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaacccca 185  Q
    |||||| |||||||| ||||| |||||||||| | ||  ||| |||||||||||||||| | |||||||  |||||||||||| ||||||||||||||||    
T  20470902 acaactcctctaattatcatcttatttgtcttcacatataaataaaagtactaaaaacaaagccaaaaaattcatatgatgcttcgtcatcacaacccca 20471001  T
Q  186 aact 189  Q
    ||||    
T  20471002 aact 20471005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 2632523 - 2632619
Alignment:
Q  81 catcaacaactactctaattctcatcctatttgtctttaaattcaaag-aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||| |||||| |||||| ||||| |||||||||| ||||| |||||||||| |||||||| ||||||||||||| ||| ||| |||||||    
T  2632523 catcaacaactcctctaactctcatactattagtctttaaatgcaaagaaaaagtactataaacataa-caaaaatatcatacgatactctgtcatca 2632619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 7142099 - 7142030
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||||||||||| ||||||||| || |||||||||| |||||||| ||||||||||||| |||||||    
T  7142099 tatttgtctttaaatgcaaagaaaactattaaaaacatagccaaaaatgtcatatgatgctctgtcatca 7142030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 21471813 - 21471717
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaa-gtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||| | ||||| |||||||||| |||| ||| ||||| ||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||    
T  21471813 ctctaaatatcatcttatttgtcttcaaatgcaaggaaaaagtactaaaaacataaccaaaa-tggcatatgatgctctgtcatcacaaccccaaact 21471717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 7494720 - 7494631
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||| ||| |||||||| || | ||||||||||||||||||  ||| ||||||||||||| ||||||||  ||||||||||| ||||||    
T  7494720 tctcaacctgtttgtcttcaagtgcaaagaaaagtactaaaagaatagccaaaaatatcatgtgatgctcattcatcacaaccacaaact 7494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 9761537 - 9761598
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaa 187  Q
    ||||||||||||||||||| || |||||| | ||||||||||||| |||||||||||||||||    
T  9761537 aaagaaaagtactaaaaacgtagccaaaa-tgtcatatgatgctctgtcatcacaaccccaaa 9761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 9801996 - 9802057
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaa 187  Q
    ||||||||||||||||||| || |||||| | ||||||||||||| |||||||||||||||||    
T  9801996 aaagaaaagtactaaaaacgtagccaaaa-tgtcatatgatgctctgtcatcacaaccccaaa 9802057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 21544749 - 21544679
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||| |||||| ||| || |||||||||||||||||||||||||  || |||||| |||||||||||||||    
T  21544749 tgtggagaacggtaaacttactactttattacttgttacgatttggtgcacttgccaatttcgtccatcaa 21544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 2353357 - 2353421
Alignment:
Q  111 ttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcat 175  Q
    ||||||| |||| |||||||||  |||||||||||| || ||||||||||| |||||||||||||    
T  2353357 ttgtcttcaaatgcaaagaaaacaactaaaaacatagcctaaaatatcatacgatgctccgtcat 2353421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 20446262 - 20446171
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaag-aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||||||||||| || ||||||| |||| ||||| ||||||| ||||||||| | | ||||||||||||| ||||| |||||||    
T  20446262 acaactcctctaattctcatcttaattgtcttcaaatgcaaagaaaaagtattaaaaacat-agctaaaatatcatatgttgctctgtcatca 20446171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 23124924 - 23124833
Alignment:
Q  85 aacaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||| ||||||| |||||||||| ||||  ||||||| ||||||||||||||   |||||| ||| |||||||||| ||||||    
T  23124924 aacaactcctctaaatctcatcttatttgtcttcaaatgtaaagaaa-gtactaaaaacatagtaaaaaatgtcagatgatgctccatcatca 23124833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 7494484 - 7494555
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||| |||| ||||| || |||| ||||||||||||||||||||  || |||||| ||||||||||||||    
T  7494484 cctgtggagaatgataaacttactaatttattacttgttacgatttggtgcacttgccaatttcgtccatca 7494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 18496555 - 18496498
Alignment:
Q  119 aaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||| ||||||||| ||||||||||||| || ||||||||||||| |||||| |||||    
T  18496555 aaatgcaaagaaaactactaaaaacatagcctaaaatatcatatggtgctccatcatc 18496498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 21545929 - 21545984
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatg---atgctccgtcatca 177  Q
    ||||||||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  21545929 aaagaaaagtactaaaaacatagtcaaaaatatcatatgatcatgctccgtcatca 21545984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 7143571 - 7143639
Alignment:
Q  18 tgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    ||||||||||||| ||  ||||||||||||||||||||||||  || |||||  |||||| ||||||||    
T  7143571 tgaagaacgataaacttgctactttattacttgttacgatttggtgcacttgtcaatttcatccatcaa 7143639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 7776422 - 7776350
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||| |||||||||| || |||||||| |||||||||| |||||  || |||||||||||| || ||||||    
T  7776422 cctgtggagaacgataaacttactactttgttacttgttaagatttggtgcacttgctaattttgttcatcaa 7776350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 9071392 - 9071451
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtc 80  Q
    ||||||| || || |||||||| |||||||||||||||| ||| | ||||||||||||||    
T  9071392 agaacgaaaaacttactacttttttacttgttacgatttgatgcagttgctaatttcgtc 9071451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 18494626 - 18494555
Alignment:
Q  14 cctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||| ||||| |||| || ||||| |||||||||||||||||||  || |||||| ||||||||| ||||    
T  18494626 cctgtggagaacaataaacttactaccttattacttgttacgatttggtgcacttgccaatttcgtctatca 18494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 21473039 - 21473094
Alignment:
Q  35 actactttattacttgttacgatttcatgaacttgctaatttcgtccatcaacaac 90  Q
    |||||||||| |||||||| |||||  || ||||| ||||||||||||||||||||    
T  21473039 actactttataacttgttatgatttggtgcacttgataatttcgtccatcaacaac 21473094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 3269123 - 3269177
Alignment:
Q  135 actaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||||||||| || ||| |||||||||| |||| |||||||||||| ||||||    
T  3269123 actaaaaacatagcctaaagtatcatatgaagctcggtcatcacaacctcaaact 3269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 7815332 - 7815267
Alignment:
Q  100 tctcatcctatttgtctttaaattcaa-agaaaagtactaaaaacataaccaaaaatatcatatgat 165  Q
    ||||||| ||||| |||| |||| ||| | ||||||||||||||||||||| |||||||||||||||    
T  7815332 tctcatcttatttatcttcaaatgcaacaaaaaagtactaaaaacataacc-aaaatatcatatgat 7815267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 22532784 - 22532830
Alignment:
Q  135 actaaaaacataaccaaaaatatcatatgatgctccgtcatcacaac 181  Q
    |||||||||||| || |||||||||||||||||||| |||| |||||    
T  22532784 actaaaaacatagcctaaaatatcatatgatgctccatcattacaac 22532830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 7152116 - 7152157
Alignment:
Q  18 tgaagaacgataatctgactactttattacttgttacgattt 59  Q
    |||| |||||||| || |||||||||||||||||||||||||    
T  7152116 tgaaaaacgataaacttactactttattacttgttacgattt 7152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 14074486 - 14074547
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||| || |||||||||||||||||||||||||  || |||| | | ||||||||||||    
T  14074486 acgataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatca 14074547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 14384514 - 14384575
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||| || |||||||||||||||||||||||||  || |||| | | ||||||||||||    
T  14384514 acgataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatca 14384575  T

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Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 1676403 - 1676490
Alignment:
Q  102 tcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||| |||||||||| ||||  |||||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  1676403 tcatcttatttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcatcacaaccccaaact 1676490  T

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Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 1682931 - 1683018
Alignment:
Q  102 tcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||| |||||||||| ||||  |||||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  1682931 tcatcttatttgtcttcaaatgtaaagaaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcatcacaaccccaaact 1683018  T

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Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 15192212 - 15192137
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcat 175  Q
    ||||||| |||||||||| |||| ||||||||||||| ||||||||||| |||||| ||||||||||||| |||||    
T  15192212 tctcatcttatttgtcttcaaatgcaaagaaaagtacgaaaaacataacaaaaaatgtcatatgatgctctgtcat 15192137  T

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Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 34864383 - 34864458
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcata 161  Q
    |||||| |||||| | | ||| |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  34864383 acaactcctctaacttttatcttatttgtcttcaaatacaaagaaaagtactaaaaacataacaaaaaatatcata 34864458  T

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Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 12111446 - 12111510
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtca 174  Q
    |||||||| |||| |||| |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  12111446 tttgtcttcaaatgcaaataaaagtactaaaaacataacaaaaaatgtcatatgatgctctgtca 12111510  T

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Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 18897992 - 18897921
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcaca 179  Q
    |||||||||| |||| |||||||||||| |||||||| | |||||||| |||||||||| |||| |||||||    
T  18897992 tatttgtcttcaaatgcaaagaaaagtagtaaaaacacagccaaaaatgtcatatgatgatccgccatcaca 18897921  T

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Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 5906819 - 5906905
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaa-atatcatatgatgctccgtcatcac 178  Q
    |||||| ||||||| | |||||||| |||| |||| |||||||||||||||||| | |||| ||||||||||||| | |||||||||    
T  5906819 ctctaactctcatcttgtttgtcttcaaatgcaaataaaagtactaaaaacatagcaaaaatatatcatatgatgtttcgtcatcac 5906905  T

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Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 47023622 - 47023552
Alignment:
Q  15 ctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||||||| ||||| || ||||| ||||||||||||||||||| ||| |||||| |||||||| |||||    
T  47023622 ctgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgttcatca 47023552  T

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Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 10576437 - 10576373
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||||  ||||||||||||  | ||||||||||||||| |||| ||||||||||||||||||    
T  10576437 aaagaaaataactaaaaacatagtctaaaatatcatatgatactccatcatcacaaccccaaact 10576373  T

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Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 20717941 - 20718004
Alignment:
Q  23 aacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    |||||||| || |||||||||||||||||||||||||  || |||||| ||||||||| |||||    
T  20717941 aacgataaacttactactttattacttgttacgatttggtgcacttgccaatttcgtctatcaa 20718004  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 9288204 - 9288142
Alignment:
Q  115 ctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||| || ||||||||| ||||||||||||| || ||||||||||||| |||||| ||||||    
T  9288204 ctttatatgcaaagaaaactactaaaaacatatcctaaaatatcatatggtgctccttcatca 9288142  T

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Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 12840761 - 12840697
Alignment:
Q  22 gaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatcaa 86  Q
    ||||||||| || ||||||||| ||||||||||||||   || |||||| |||||||||||||||    
T  12840761 gaacgataaacttactactttaatacttgttacgattcagtgcacttgccaatttcgtccatcaa 12840697  T

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Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 22219945 - 22220009
Alignment:
Q  21 agaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    |||||||||| || ||||||||||||||||||| |||||  || |||||  ||||||||||||||    
T  22219945 agaacgataaacttactactttattacttgttatgatttagtgcacttgtcaatttcgtccatca 22220009  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 25315323 - 25315414
Alignment:
Q  86 acaactactctaattctcatcctatttgtctttaaattcaaagaaaagtact-aaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| |||||  ||||||| ||||| |||| ||||  ||||||||||||| |||||||||| | ||||| ||||||||||||| |||||||    
T  25315323 acaactcctctatctctcatcttatttatcttcaaatgtaaagaaaagtactaaaaaacataa-ctaaaatgtcatatgatgctcggtcatca 25315414  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 24580004 - 24580047
Alignment:
Q  16 tgtgaagaacgataatctgactactttattacttgttacgattt 59  Q
    |||| |||||||||| || |||||||||||||||||||||||||    
T  24580004 tgtggagaacgataaactaactactttattacttgttacgattt 24580047  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 25050164 - 25050227
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaata 156  Q
    |||||| | ||||| |||||||||| |||| |||| |||| ||||||||||||| |||||||||    
T  25050164 ctctaactttcatcttatttgtcttcaaatacaaataaaaatactaaaaacatagccaaaaata 25050227  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 30797703 - 30797754
Alignment:
Q  24 acgataatctgactactttattacttgttacgatttcatgaacttgctaatt 75  Q
    ||||||| || ||||||||||||||||||||||||| ||| |||||| ||||    
T  30797703 acgataaacttactactttattacttgttacgatttgatgcacttgccaatt 30797754  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 1696675 - 1696762
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    ||||||| |||||||||| ||||  ||| |||||||||||| |  || |||||||| ||||||||||||   ||||||||||| ||||||    
T  1696675 tctcatcttatttgtcttcaaatgtaaataaaagtactaaata--tagccaaaaatgtcatatgatgctttatcatcacaacctcaaact 1696762  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 10320350 - 10320394
Alignment:
Q  125 aaagaaaagtactaaaaacataaccaaaaatatcatatgatgctc 169  Q
    |||||||| ||||||||||||| | |||||| |||||||||||||    
T  10320350 aaagaaaattactaaaaacatagcgaaaaatgtcatatgatgctc 10320394  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 17339927 - 17339995
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatc 176  Q
    |||||| ||||||||  ||| ||||  | |||||||||| || |||||||||||||||||||| |||||    
T  17339927 tatttgcctttaaatgtaaataaaataattaaaaacatagcctaaaatatcatatgatgctccatcatc 17339995  T

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Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 6205 - 6128
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| ||||||| |||||||  |||||||||||||||||||||| ||||||||  |||||||||||  |||||||    
T  6205 tctcatcttatttgtgtttaaatggaaagaaaagtactaaaaacatagccaaaaatgccatatgatgctatgtcatca 6128  T

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Target: scaffold0171; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 7349 - 7421
Alignment:
Q  13 acctgtgaagaacgataatctgactactttattacttgttacgatttcatgaacttgctaatttcgtccatca 85  Q
    ||||||| |||||||||| || |||||||||||||||||||||||||  || |||||  ||||||||||||||    
T  7349 acctgtggagaacgataaacttactactttattacttgttacgatttggtgcacttgtcaatttcgtccatca 7421  T

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Target: scaffold0171; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 21398 - 21336
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctcc 170  Q
    ||||| |||| |||| |||||||||  |||||||||||||  |||||||||||||||||||||    
T  21398 tatttttcttcaaatgcaaagaaaaacactaaaaacataataaaaaatatcatatgatgctcc 21336  T

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Target: scaffold0386 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 8816 - 8892
Alignment:
Q  101 ctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    |||||| ||||| |||| ||||  ||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  8816 ctcatcttatttttcttaaaatgaaaataaaagtactaaaaaaataaccaaaaatatcatatgatgttccatcatca 8892  T

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Target: scaffold0386; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 13170 - 13239
Alignment:
Q  93 ctctaattctcatcctatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatat 162  Q
    |||||| ||||||| |||||||||| | ||  ||| |||||||||||||||||||| |||||||||||||    
T  13170 ctctaactctcatcttatttgtcttaatatgaaaataaaagtactaaaaacataactaaaaatatcatat 13239  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 447014 - 446937
Alignment:
Q  100 tctcatcctatttgtctttaaattcaaag-aaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatca 177  Q
    ||||||| |||||||||| ||||  |||| |||||||||||||||||| | |||||||||||||||||||| |||||||    
T  447014 tctcatcttatttgtcttcaaatgtaaaggaaaagtactaaaaacatagc-aaaaatatcatatgatgctctgtcatca 446937  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 27068 - 27128
Alignment:
Q  108 tatttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgct 168  Q
    ||||| |||| |||| ||||||||||||||||||||||| || |||||||||| |||||||    
T  27068 tatttatcttcaaatgcaaagaaaagtactaaaaacatagccgaaaatatcatgtgatgct 27128  T

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Target: scaffold0282 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 22661 - 22740
Alignment:
Q  110 tttgtctttaaattcaaagaaaagtactaaaaacataaccaaaaatatcatatgatgctccgtcatcacaaccccaaact 189  Q
    |||||||| |||| |||| |||||||| ||||||||| ||||||||   |||||||| ||  ||||||||||||||||||    
T  22661 tttgtcttcaaatgcaaataaaagtacaaaaaacatagccaaaaatggtatatgatggtctatcatcacaaccccaaact 22740  T

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