View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6916_high_6 (Length: 291)

Name: NF6916_high_6
Description: NF6916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6916_high_6
NF6916_high_6
[»] chr6 (21 HSPs)
chr6 (21-173)||(22623454-22623606)
chr6 (202-273)||(22623275-22623346)
chr6 (217-269)||(25119143-25119195)
chr6 (222-269)||(20522706-20522753)
chr6 (217-259)||(16967578-16967620)
chr6 (217-259)||(18611936-18611978)
chr6 (217-259)||(30909362-30909404)
chr6 (170-203)||(22623218-22623251)
chr6 (217-269)||(19281320-19281372)
chr6 (217-269)||(21384826-21384878)
chr6 (217-269)||(22857525-22857577)
chr6 (224-259)||(7765183-7765218)
chr6 (217-259)||(27079749-27079791)
chr6 (226-259)||(4102597-4102630)
chr6 (226-259)||(7371061-7371094)
chr6 (225-262)||(11140300-11140337)
chr6 (226-259)||(20522811-20522844)
chr6 (226-259)||(21384952-21384985)
chr6 (226-259)||(22857640-22857673)
chr6 (226-259)||(30387163-30387196)
chr6 (226-259)||(30909238-30909271)
[»] chr8 (26 HSPs)
chr8 (217-269)||(15809795-15809847)
chr8 (217-269)||(17656773-17656825)
chr8 (217-269)||(34343406-34343458)
chr8 (217-259)||(10585907-10585949)
chr8 (217-259)||(23397215-23397257)
chr8 (217-259)||(39022616-39022658)
chr8 (217-259)||(45409453-45409495)
chr8 (217-269)||(2541036-2541088)
chr8 (222-269)||(17792729-17792776)
chr8 (217-259)||(9853028-9853070)
chr8 (217-259)||(18022597-18022639)
chr8 (217-259)||(18026921-18026963)
chr8 (217-259)||(18161444-18161486)
chr8 (217-259)||(40022618-40022660)
chr8 (226-259)||(185929-185962)
chr8 (226-259)||(1672221-1672254)
chr8 (226-259)||(10586024-10586057)
chr8 (222-259)||(13526244-13526281)
chr8 (222-259)||(13615779-13615816)
chr8 (226-259)||(17656666-17656699)
chr8 (217-270)||(23504530-23504582)
chr8 (217-258)||(23940673-23940714)
chr8 (226-259)||(34647534-34647567)
chr8 (226-259)||(40022751-40022784)
chr8 (217-253)||(7614591-7614627)
chr8 (217-269)||(23567598-23567650)
[»] chr1 (43 HSPs)
chr1 (217-270)||(17811238-17811291)
chr1 (217-269)||(15588626-15588678)
chr1 (217-269)||(24368571-24368623)
chr1 (217-259)||(28322630-28322672)
chr1 (217-269)||(14389999-14390051)
chr1 (217-269)||(17893109-17893161)
chr1 (217-261)||(18057435-18057479)
chr1 (217-269)||(45849145-45849197)
chr1 (217-259)||(2741504-2741546)
chr1 (217-259)||(23319258-23319300)
chr1 (217-259)||(37642889-37642931)
chr1 (222-259)||(23921168-23921205)
chr1 (217-269)||(29945373-29945423)
chr1 (222-259)||(30788780-30788817)
chr1 (217-269)||(12070458-12070510)
chr1 (217-269)||(12796584-12796636)
chr1 (217-269)||(18952444-18952496)
chr1 (217-269)||(33157135-33157187)
chr1 (225-259)||(16116472-16116506)
chr1 (217-259)||(16116640-16116682)
chr1 (217-259)||(18057568-18057610)
chr1 (217-259)||(20506539-20506581)
chr1 (217-259)||(21256070-21256112)
chr1 (217-259)||(31529018-31529060)
chr1 (217-259)||(35197443-35197485)
chr1 (217-259)||(51420853-51420895)
chr1 (226-259)||(10497901-10497934)
chr1 (226-259)||(11354474-11354507)
chr1 (226-259)||(12070573-12070606)
chr1 (226-259)||(14229324-14229357)
chr1 (226-259)||(18952549-18952582)
chr1 (226-259)||(21256202-21256235)
chr1 (226-259)||(23277329-23277362)
chr1 (226-259)||(23921300-23921333)
chr1 (226-259)||(29945265-29945298)
chr1 (226-259)||(31084049-31084082)
chr1 (226-259)||(32595152-32595185)
chr1 (222-259)||(33097812-33097849)
chr1 (226-259)||(37642766-37642799)
chr1 (224-269)||(49992680-49992725)
chr1 (217-269)||(1395306-1395358)
chr1 (217-245)||(23174939-23174967)
chr1 (217-269)||(47693703-47693755)
[»] chr7 (26 HSPs)
chr7 (217-269)||(6846616-6846668)
chr7 (217-269)||(32604758-32604810)
chr7 (222-269)||(31365430-31365477)
chr7 (222-269)||(38837577-38837624)
chr7 (217-259)||(39007240-39007282)
chr7 (217-269)||(44426754-44426806)
chr7 (217-259)||(6620753-6620795)
chr7 (217-259)||(24360537-24360579)
chr7 (217-259)||(25779488-25779530)
chr7 (217-259)||(30430533-30430575)
chr7 (224-269)||(46004378-46004423)
chr7 (217-261)||(30430400-30430444)
chr7 (225-269)||(41065805-41065849)
chr7 (223-259)||(46346167-46346203)
chr7 (222-269)||(5728840-5728887)
chr7 (217-259)||(32091303-32091345)
chr7 (217-259)||(48830371-48830413)
chr7 (226-259)||(5728728-5728761)
chr7 (226-259)||(24360413-24360446)
chr7 (226-259)||(25779364-25779397)
chr7 (226-259)||(32090059-32090092)
chr7 (226-259)||(34876228-34876261)
chr7 (226-259)||(48830247-48830280)
chr7 (225-269)||(7843556-7843600)
chr7 (217-245)||(33798450-33798478)
chr7 (217-245)||(48305978-48306006)
[»] chr5 (23 HSPs)
chr5 (217-269)||(35662188-35662240)
chr5 (222-269)||(16552284-16552331)
chr5 (217-270)||(3340734-3340787)
chr5 (217-269)||(11660830-11660882)
chr5 (217-269)||(22830743-22830795)
chr5 (217-259)||(4675485-4675527)
chr5 (217-259)||(23334953-23334995)
chr5 (217-259)||(42512635-42512677)
chr5 (217-269)||(5630226-5630278)
chr5 (217-269)||(15059588-15059640)
chr5 (217-269)||(33857391-33857443)
chr5 (217-269)||(36864223-36864275)
chr5 (217-259)||(7286909-7286951)
chr5 (217-259)||(35915874-35915916)
chr5 (227-269)||(42746808-42746850)
chr5 (226-259)||(8949512-8949545)
chr5 (226-259)||(16668203-16668236)
chr5 (226-259)||(23155573-23155606)
chr5 (226-259)||(23155690-23155723)
chr5 (217-269)||(703767-703819)
chr5 (217-269)||(11376418-11376470)
chr5 (217-269)||(20134236-20134288)
chr5 (217-269)||(25671243-25671295)
[»] chr4 (45 HSPs)
chr4 (217-269)||(12722775-12722827)
chr4 (217-269)||(31762966-31763018)
chr4 (217-269)||(53865198-53865250)
chr4 (217-259)||(21097759-21097801)
chr4 (217-269)||(30779380-30779432)
chr4 (217-269)||(38563842-38563894)
chr4 (217-259)||(6385799-6385841)
chr4 (217-259)||(9553091-9553133)
chr4 (217-259)||(22180581-22180623)
chr4 (217-259)||(50644475-50644517)
chr4 (222-259)||(27764912-27764949)
chr4 (217-270)||(33883330-33883383)
chr4 (217-269)||(1492816-1492868)
chr4 (217-269)||(2124381-2124433)
chr4 (217-269)||(38010665-38010717)
chr4 (222-269)||(8165799-8165846)
chr4 (216-259)||(29825934-29825977)
chr4 (217-256)||(43852177-43852216)
chr4 (222-269)||(53526412-53526459)
chr4 (217-259)||(4169045-4169087)
chr4 (217-259)||(4169178-4169220)
chr4 (217-255)||(16474873-16474911)
chr4 (217-259)||(21097891-21097933)
chr4 (217-259)||(22180448-22180490)
chr4 (217-259)||(30358609-30358651)
chr4 (217-259)||(36309572-36309614)
chr4 (217-259)||(38010489-38010531)
chr4 (217-259)||(49137358-49137400)
chr4 (226-259)||(1492720-1492753)
chr4 (226-259)||(6768451-6768484)
chr4 (226-259)||(6806523-6806556)
chr4 (222-259)||(8165925-8165962)
chr4 (226-259)||(8166041-8166074)
chr4 (226-259)||(12722901-12722934)
chr4 (226-259)||(16474983-16475016)
chr4 (226-259)||(21995718-21995751)
chr4 (226-259)||(29826067-29826100)
chr4 (226-259)||(31763071-31763104)
chr4 (226-259)||(38010541-38010574)
chr4 (226-259)||(50644350-50644383)
chr4 (226-259)||(54895452-54895485)
chr4 (217-269)||(17109756-17109808)
chr4 (226-258)||(38563925-38563957)
chr4 (217-269)||(43375476-43375528)
chr4 (217-269)||(54895538-54895590)
[»] scaffold0194 (2 HSPs)
scaffold0194 (217-259)||(28291-28333)
scaffold0194 (225-259)||(28432-28466)
[»] chr2 (23 HSPs)
chr2 (217-259)||(20710542-20710584)
chr2 (217-269)||(12449091-12449143)
chr2 (217-269)||(37867310-37867362)
chr2 (222-269)||(31711659-31711706)
chr2 (222-269)||(34726641-34726688)
chr2 (222-259)||(20710414-20710451)
chr2 (217-269)||(30777332-30777384)
chr2 (217-269)||(31783937-31783989)
chr2 (217-269)||(42364648-42364700)
chr2 (222-269)||(22588355-22588402)
chr2 (217-259)||(3926151-3926193)
chr2 (217-259)||(3928203-3928245)
chr2 (217-259)||(4281063-4281105)
chr2 (217-259)||(41345317-41345359)
chr2 (226-259)||(1095331-1095364)
chr2 (226-259)||(12449206-12449239)
chr2 (226-259)||(30777489-30777522)
chr2 (226-259)||(31711558-31711591)
chr2 (222-259)||(36636173-36636210)
chr2 (226-259)||(42364540-42364573)
chr2 (217-261)||(20661441-20661485)
chr2 (217-269)||(23225985-23226037)
chr2 (217-269)||(24183434-24183486)
[»] scaffold0291 (1 HSPs)
scaffold0291 (217-269)||(9547-9599)
[»] chr3 (25 HSPs)
chr3 (217-269)||(36185763-36185815)
chr3 (217-259)||(9183787-9183829)
chr3 (217-259)||(47728942-47728984)
chr3 (217-259)||(53595429-53595471)
chr3 (217-269)||(21175223-21175275)
chr3 (217-269)||(49053262-49053314)
chr3 (226-269)||(19012526-19012569)
chr3 (222-269)||(47225808-47225855)
chr3 (217-259)||(8718886-8718928)
chr3 (217-259)||(9070773-9070815)
chr3 (217-259)||(16276922-16276964)
chr3 (217-259)||(23699862-23699904)
chr3 (217-259)||(23718317-23718359)
chr3 (217-259)||(23736773-23736815)
chr3 (217-259)||(23756046-23756088)
chr3 (217-259)||(34562629-34562671)
chr3 (217-259)||(39194574-39194616)
chr3 (217-259)||(51681442-51681484)
chr3 (226-259)||(23755922-23755955)
chr3 (226-259)||(28299532-28299565)
chr3 (226-259)||(34562764-34562797)
chr3 (217-245)||(19384786-19384814)
chr3 (223-259)||(28299575-28299611)
chr3 (217-253)||(38345435-38345471)
chr3 (217-269)||(47924202-47924254)
[»] scaffold0097 (2 HSPs)
scaffold0097 (217-259)||(14381-14423)
scaffold0097 (222-259)||(14253-14290)
[»] scaffold0009 (1 HSPs)
scaffold0009 (217-259)||(203289-203331)
[»] scaffold0249 (1 HSPs)
scaffold0249 (217-269)||(23581-23633)
[»] scaffold0129 (1 HSPs)
scaffold0129 (217-269)||(19957-20009)
[»] scaffold0664 (1 HSPs)
scaffold0664 (222-269)||(3114-3161)
[»] scaffold0516 (1 HSPs)
scaffold0516 (222-269)||(1208-1255)
[»] scaffold0102 (1 HSPs)
scaffold0102 (225-269)||(15613-15657)
[»] scaffold0031 (1 HSPs)
scaffold0031 (217-269)||(80704-80756)


Alignment Details
Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 22623606 - 22623454
Alignment:
Q  21 atgaccatggcataagtgtagagttcattattgcctatttattttcaaagatttgttaaccaatcctataaatcattgaannnnnnnngttgaccttgtt 120  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||    
T  22623606 atgaccattgcataagtgtagagttcattattgcctatttattttcaaagatttgttaaccaatcctataaatcattgaattttttttgttgaccttgtt 22623507  T
Q  121 gcaacnnnnnnnnntgaaatttttgacctcttatgaaaattattaaccaaaat 173  Q
    ||||           ||||||||||||||||||||||||||||||||||||||    
T  22623506 gcaaaaaaaaaaaaagaaatttttgacctcttatgaaaattattaaccaaaat 22623454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 22623346 - 22623275
Alignment:
Q  202 aaataatttatgcagagtatatctaatggttttggagtacaactcagagaaaccatttatgaatttatatca 273  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  22623346 aaataatttatgcagagcacatctaatggttttagagtacaactcagagaaaccatttatggatttatatca 22623275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 25119195 - 25119143
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  25119195 agtacatctaatggttttggagtacaactcacagaaaccatttctgaatttat 25119143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 20522753 - 20522706
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  20522753 atctaatggttctggagtacaactcaaagaaaccatttctgaatttat 20522706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 16967620 - 16967578
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  16967620 agtacatctaatggttttggagtacaactcacagaaaccattt 16967578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 18611936 - 18611978
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  18611936 agtacatctaatggttttggagtacaactcacagaaaccattt 18611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 30909362 - 30909404
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  30909362 agtacatctaatggttttggagtacaactcacagaaaccattt 30909404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 22623251 - 22623218
Alignment:
Q  170 aaataggaccctagcatactgctttgccactaaa 203  Q
    ||||||||||||||||||||||||||||||||||    
T  22623251 aaataggaccctagcatactgctttgccactaaa 22623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 19281372 - 19281320
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||| | ||||| ||||| |||||||||    
T  19281372 agtacatctaatggttttggagtacaacttatagaaagcatttctgaatttat 19281320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 21384878 - 21384826
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||| ||||||||| ||||||||||| || ||||||    
T  21384878 agtaaatctaatggttttggaatacaactcacagaaaccatttctggatttat 21384826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 22857577 - 22857525
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||| ||||||||||| | ||||||||| |||||||||    
T  22857577 agtacatctaatggttttgaagtacaactcacaaaaaccatttctgaatttat 22857525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 7765183 - 7765218
Alignment:
Q  224 ctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||| |||||||||||    
T  7765183 ctaatggttttggagtacaactcacagaaaccattt 7765218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 27079791 - 27079749
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| ||||| |||||    
T  27079791 agtacatctaatggttttggagtacaactcacagaaatcattt 27079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 4102630 - 4102597
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  4102630 aatggttttggagtacaactcacagaaaccattt 4102597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 7371094 - 7371061
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  7371094 aatggttttggagtacaactcacagaaaccattt 7371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 11140337 - 11140300
Alignment:
Q  225 taatggttttggagtacaactcagagaaaccatttatg 262  Q
    |||||||||||||||||||||||  |||||||||||||    
T  11140337 taatggttttggagtacaactcacggaaaccatttatg 11140300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 20522844 - 20522811
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  20522844 aatggttttggagtacaactcatagaaaccattt 20522811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 21384985 - 21384952
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  21384985 aatggttttggagtacaactcacagaaaccattt 21384952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 22857673 - 22857640
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  22857673 aatggttttggagtacaactcacagaaaccattt 22857640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 30387196 - 30387163
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  30387196 aatggttttggagtacaactcacagaaaccattt 30387163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 30909238 - 30909271
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  30909238 aatggttttggagtacaactcacagaaaccattt 30909271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 15809795 - 15809847
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  15809795 agtacatctaatggttttggagtacaactcagagaaaccatttctgaatttat 15809847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 17656773 - 17656825
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  17656773 agtacatctaatggttttggagtacaactcacagaaaccatttctggatttat 17656825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 34343406 - 34343458
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  34343406 agtacatctaatggttttggaatacaactcatagaaaccatttctgaatttat 34343458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 10585949 - 10585907
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  10585949 agtacatctaatggttttggagtacaactcatagaaaccattt 10585907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 23397215 - 23397257
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  23397215 agtacatctaatggttttggagtacaactcacagaaaccattt 23397257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 39022616 - 39022658
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  39022616 agtacatctaatggttttggagtacaactcacagaaaccattt 39022658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 45409495 - 45409453
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  45409495 agtacatctaatggttttggagtacaactcaaagaaaccattt 45409453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 2541088 - 2541036
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||| |||||||||||||||||| ||||||||||| | |||||||    
T  2541088 agtacatctaatagttttggagtacaactcacagaaaccatttctaaatttat 2541036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 17792776 - 17792729
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||| |||||||||| ||||||||||| || ||||||    
T  17792776 atctaatggttttggcgtacaactcaaagaaaccatttctggatttat 17792729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 9853028 - 9853070
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||| |||||||||||||||||| | |||||||||    
T  9853028 agtatatctaatagttttggagtacaactcacaaaaaccattt 9853070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 18022597 - 18022639
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  18022597 agtacatctaatggttttggagtacaactcacataaaccattt 18022639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 18026921 - 18026963
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||| ||||||| |||||||||||    
T  18026921 agtacatctaatggttttggagtccaactcacagaaaccattt 18026963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 18161444 - 18161486
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||| ||||||||| |||||||||||    
T  18161444 agtacatctaatggttttggaatacaactcacagaaaccattt 18161486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 40022660 - 40022618
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| ||||||| |||||||||||||||||| |||||||||||    
T  40022660 agtacatctaatagttttggagtacaactcacagaaaccattt 40022618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 185929 - 185962
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  185929 aatggttttggagtacaactcacagaaaccattt 185962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 1672221 - 1672254
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||| ||||||||||||||||||||||||    
T  1672221 aatggtttttgagtacaactcagagaaaccattt 1672254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 10586057 - 10586024
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  10586057 aatggttttggagtacaactcacagaaaccattt 10586024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 13526281 - 13526244
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  13526281 atcttatggttttggagtacaactcacagaaaccattt 13526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 13615816 - 13615779
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  13615816 atcttatggttttggagtacaactcacagaaaccattt 13615779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 17656666 - 17656699
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  17656666 aatggttttggagtacaactcacagaaaccattt 17656699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 23504582 - 23504530
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttata 270  Q
    |||| |||||||| ||||||||||||||||| | ||||||||| ||||||||||    
T  23504582 agtacatctaatgattttggagtacaactcaca-aaaccatttctgaatttata 23504530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 23940714 - 23940673
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatt 258  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  23940714 agtacatctaatggttttggagtacaactcaaagaaatcatt 23940673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 34647567 - 34647534
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  34647567 aatggttttggagtacaactcacagaaaccattt 34647534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 40022784 - 40022751
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  40022784 aatggttttggagtacaactcacagaaaccattt 40022751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 7614591 - 7614627
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaa 253  Q
    |||| |||||||||||||||||||||||||| |||||    
T  7614591 agtacatctaatggttttggagtacaactcacagaaa 7614627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 23567598 - 23567650
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||| ||||||| ||||||||| ||||||||||| || ||||||    
T  23567598 agtacatctaatgattttggaatacaactcatagaaaccatttctggatttat 23567650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 17811238 - 17811291
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttata 270  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  17811238 agtacatctaatggttttggagtacaactcatagaaaccatttctgaatttata 17811291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 15588626 - 15588678
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  15588626 agtacatctaatggttttggagtacaagtcacagaaaccatttatgaatttat 15588678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 24368571 - 24368623
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  24368571 agtacatctaatggttttggagtacaactcacagaaaccatttctgaatttat 24368623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 28322672 - 28322630
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  28322672 agtatatctaatggttttggagtacaactcacagaaaccattt 28322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 14389999 - 14390051
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| | |||||||    
T  14389999 agtacatctaatggttttggagtacaactcacagaaaccatttctaaatttat 14390051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 17893161 - 17893109
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  17893161 agtacatctaatggttttggagtacaactcacagaaaccatttctggatttat 17893109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 18057435 - 18057479
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttat 261  Q
    |||| |||||||||||||||||||||||||| |||||||||||||    
T  18057435 agtacatctaatggttttggagtacaactcacagaaaccatttat 18057479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 45849197 - 45849145
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  45849197 agtacatctaatggttttggagtacaactcacagaaaccatttctggatttat 45849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 2741504 - 2741546
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  2741504 agtacatctaatggttttggagtacaactcacagaaaccattt 2741546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 23319300 - 23319258
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  23319300 agtacatctaatggttttggagtacaactcacagaaaccattt 23319258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 37642889 - 37642931
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  37642889 agtacatctaatggttttggagtacaactcacagaaaccattt 37642931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 23921205 - 23921168
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||||| |||||||||||    
T  23921205 atctaatggttttggagtacaactcacagaaaccattt 23921168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 29945373 - 29945423
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||||||||||||||  ||||||||||| | |||||||    
T  29945373 agtatatctaatggttttggagtacaactc--agaaaccatttctaaatttat 29945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 30788780 - 30788817
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||||| |||||||||||    
T  30788780 atctaatggttttggagtacaactcacagaaaccattt 30788817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 12070510 - 12070458
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| | ||| ||||||| |||||||    
T  12070510 agtacatctaatggttttggagtacaactcacaaaaatcatttataaatttat 12070458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 12796584 - 12796636
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| || ||||||    
T  12796584 agtacatctaatggttttagagtacaactcacagaaaccatttctggatttat 12796636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 18952496 - 18952444
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||| ||||||||||||||||||||||| | ||||||||| || ||||||    
T  18952496 agtatatttaatggttttggagtacaactcacataaaccatttctggatttat 18952444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 33157135 - 33157187
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| || ||||||    
T  33157135 agtacatctaatggttttagagtacaactcacagaaaccatttctggatttat 33157187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 16116472 - 16116506
Alignment:
Q  225 taatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||| |||||||||||    
T  16116472 taatggttttggagtacaactcacagaaaccattt 16116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 16116640 - 16116682
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  16116640 agtacatctaatgattttggagtacaactcacagaaaccattt 16116682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 18057568 - 18057610
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  18057568 agtacatctaatgattttggagtacaactcacagaaaccattt 18057610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 20506581 - 20506539
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  20506581 agtacatctaatggttttggagtacaactcacataaaccattt 20506539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 21256112 - 21256070
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||| ||||||||||||||||||| |||||||||||    
T  21256112 agtacatctaagggttttggagtacaactcacagaaaccattt 21256070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 31529060 - 31529018
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  31529060 agtacatctaatggttttggagtacaactcacataaaccattt 31529018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 35197485 - 35197443
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  35197485 agtacatctaatgattttggagtacaactcacagaaaccattt 35197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 51420853 - 51420895
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||| ||||||| |||||||||||    
T  51420853 agtacatctaatggttttggagtgcaactcacagaaaccattt 51420895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 10497901 - 10497934
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  10497901 aatggttttggagtacaactcacagaaaccattt 10497934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 11354507 - 11354474
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  11354507 aatggttttggagtacaactcacagaaaccattt 11354474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 12070606 - 12070573
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  12070606 aatggttttggagtacaactcacagaaaccattt 12070573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 14229357 - 14229324
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  14229357 aatggttttggagtacaactcacagaaaccattt 14229324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 18952582 - 18952549
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  18952582 aatggttttggagtacaactcacagaaaccattt 18952549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 21256235 - 21256202
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  21256235 aatggttttggagtacaactcacagaaaccattt 21256202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 23277362 - 23277329
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  23277362 aatggttttggagtacaactcacagaaaccattt 23277329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 23921333 - 23921300
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  23921333 aatggttttggagtacaactcacagaaaccattt 23921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 29945265 - 29945298
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  29945265 aatggttttggagtacaactcacagaaaccattt 29945298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 31084049 - 31084082
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  31084049 aatggttttggagtacaactcacagaaaccattt 31084082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 32595152 - 32595185
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  32595152 aatggttttggagtacaactcacagaaaccattt 32595185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 33097812 - 33097849
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  33097812 atctaatggttttggagtccaactcacagaaaccattt 33097849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 37642766 - 37642799
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  37642766 aatggttttggagtacaactcacagaaaccattt 37642799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 49992680 - 49992725
Alignment:
Q  224 ctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||| ||||||| ||||||||| ||||||||||| |||||||||    
T  49992680 ctaatgattttggaatacaactcacagaaaccatttctgaatttat 49992725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 1395306 - 1395358
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||| |||| |||||||||||| | ||||||||| |||||||||    
T  1395306 agtacatctaatgatttttgagtacaactcacaaaaaccatttctgaatttat 1395358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 23174967 - 23174939
Alignment:
Q  217 agtatatctaatggttttggagtacaact 245  Q
    |||||||||||||||||||||||||||||    
T  23174967 agtatatctaatggttttggagtacaact 23174939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 47693755 - 47693703
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||| || ||||||||| | ||||||||| |||||||||    
T  47693755 agtacatctaatggttttagaatacaactcacaaaaaccatttttgaatttat 47693703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 6846668 - 6846616
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6846668 agtaaatctaatggttttggagtacaactcacagaaaccatttctgaatttat 6846616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 32604810 - 32604758
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  32604810 agtacatctaatggttttggagtacaactcacagaaaccatttctgaatttat 32604758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 31365430 - 31365477
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  31365430 atctaatggttttggagtacaactcacagaaaccatttatggatttat 31365477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 38837624 - 38837577
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  38837624 atctaatggttttggagtacaactcacagaaaccatttctgaatttat 38837577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 39007282 - 39007240
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  39007282 agtatatctaatggttttggagtacaactcacagaaaccattt 39007240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 44426754 - 44426806
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  44426754 agtacatctaatggttttggagtacaactcacagaaaccatttctggatttat 44426806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 6620753 - 6620795
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  6620753 agtacatctaatggttttggagtacaactcacagaaaccattt 6620795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 24360537 - 24360579
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  24360537 agtacatctaatggttttggagtacaactcacagaaaccattt 24360579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 25779488 - 25779530
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  25779488 agtaaatctaatggttttggagtacaactcatagaaaccattt 25779530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 30430533 - 30430575
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  30430533 agtacatctaatggttttggagtacaactcacagaaaccattt 30430575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 46004423 - 46004378
Alignment:
Q  224 ctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||    
T  46004423 ctaatggttttggagtacaactcacagaaaccatttctggatttat 46004378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 30430400 - 30430444
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttat 261  Q
    |||| |||||||||||||||||||||||||| | |||||||||||    
T  30430400 agtacatctaatggttttggagtacaactcacataaaccatttat 30430444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 41065849 - 41065805
Alignment:
Q  225 taatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||    
T  41065849 taatggttttggagtacaactcacagaaaccatttctaaatttat 41065805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 46346203 - 46346167
Alignment:
Q  223 tctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||||| |||||||||||    
T  46346203 tctaatggttttggagtacaactcacagaaaccattt 46346167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 5728840 - 5728887
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||| ||||||||| ||||||||||| || ||||||    
T  5728840 atctaatggttttggaatacaactcacagaaaccatttctggatttat 5728887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 32091303 - 32091345
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||| ||||    
T  32091303 agtacatctaatggttttggagtacaactcacagaaactattt 32091345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 48830371 - 48830413
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||| ||||    
T  48830371 agtacatctaatggttttggagtacaactcacagaaactattt 48830413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 5728728 - 5728761
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  5728728 aatggttttggagtacaactcacagaaaccattt 5728761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 24360413 - 24360446
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  24360413 aatggttttggagtacaactcacagaaaccattt 24360446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 25779364 - 25779397
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  25779364 aatggttttggagtacaactcacagaaaccattt 25779397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 32090092 - 32090059
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  32090092 aatggttttggagtacaactcacagaaaccattt 32090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 34876228 - 34876261
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  34876228 aatggttttggagtacaactcacagaaaccattt 34876261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 48830247 - 48830280
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  48830247 aatggttttggagtacaactcacagaaaccattt 48830280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 7843600 - 7843556
Alignment:
Q  225 taatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||||||| | ||||||||| || ||||||    
T  7843600 taatggttttggagtacaactcacataaaccatttctggatttat 7843556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Original strand, 33798450 - 33798478
Alignment:
Q  217 agtatatctaatggttttggagtacaact 245  Q
    |||||||||||||||||||||||||||||    
T  33798450 agtatatctaatggttttggagtacaact 33798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Original strand, 48305978 - 48306006
Alignment:
Q  217 agtatatctaatggttttggagtacaact 245  Q
    |||||||||||||||||||||||||||||    
T  48305978 agtatatctaatggttttggagtacaact 48306006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 35662188 - 35662240
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  35662188 agtacatctaatggttttggagtacaactcacagaaaccatttatggatttat 35662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 16552331 - 16552284
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  16552331 atctaatggttttggagtacaactcacagaaaccatttctgaatttat 16552284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 3340734 - 3340787
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttata 270  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  3340734 agtacatctaatggttttggagtataactcacagaaaccatttatggatttata 3340787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 11660882 - 11660830
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| | ||||||||| |||||||||    
T  11660882 agtacatctaatggttttggagtacaactcacaaaaaccatttctgaatttat 11660830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 22830743 - 22830795
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  22830743 agtacatctaatggttttggagtacaactcacagaaaccatttctggatttat 22830795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 4675485 - 4675527
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  4675485 agtatatctaatggttttggagtacaactcacataaaccattt 4675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 23334995 - 23334953
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  23334995 agtacatctaatggttttggagtacaactcacagaaaccattt 23334953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 42512635 - 42512677
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  42512635 agtacatctaatggttttggagtacaactcacagaaaccattt 42512677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 5630226 - 5630278
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| |||||| |||| || ||||||    
T  5630226 agtacatctaatggttttggagtacaactcacagaaactatttctggatttat 5630278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 15059588 - 15059640
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||| ||||||||| ||||||||||| || ||||||    
T  15059588 agtacatctaatggttttggaatacaactcacagaaaccatttctggatttat 15059640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 33857443 - 33857391
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| | ||||||||| || ||||||    
T  33857443 agtaaatctaatggttttggagtacaactcacataaaccatttttggatttat 33857391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 36864223 - 36864275
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||    
T  36864223 agtatatctaatgattttggagtacaactcacataaatcatttctgaatttat 36864275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 7286909 - 7286951
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||| ||||||||||| |||||||||||    
T  7286909 agtacatctaatggttttgaagtacaactcacagaaaccattt 7286951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 35915874 - 35915916
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  35915874 agtacatctaatgattttggagtacaactcacagaaaccattt 35915916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 42746808 - 42746850
Alignment:
Q  227 atggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||||| | ||||||||| |||||||||    
T  42746808 atggttttggagtacaactcacataaaccatttctgaatttat 42746850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 8949512 - 8949545
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  8949512 aatggttttggagtacaactcacagaaaccattt 8949545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 16668236 - 16668203
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  16668236 aatggttttggagtacaactcacagaaaccattt 16668203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 23155573 - 23155606
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  23155573 aatggttttggagtacaactcacagaaaccattt 23155606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 23155690 - 23155723
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  23155690 aatggttttggagtacaactcacagaaaccattt 23155723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 703819 - 703767
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||| ||||||||||||||||| | ||||||||| | |||||||    
T  703819 agtacatctaatgattttggagtacaactcacaaaaaccatttctaaatttat 703767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 11376470 - 11376418
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||| ||||| ||||||||||| ||||||||||| | |||||||    
T  11376470 agtacatctaatgattttgaagtacaactcacagaaaccatttctaaatttat 11376418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 20134288 - 20134236
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||| ||||||| ||||||||| ||||||||||| || ||||||    
T  20134288 agtacatctaatgattttggaatacaactcacagaaaccatttctggatttat 20134236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 25671243 - 25671295
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||| |||||||| ||||| ||| ||||||||||| |||||||||    
T  25671243 agtagatctaatagttttggaatacaattcatagaaaccatttctgaatttat 25671295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 12722827 - 12722775
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  12722827 agtatatctaatggttttggagtacaactcacagaaaccatttctggatttat 12722775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 31763018 - 31762966
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  31763018 agtatatctaatggttttggagtacaactcacaaaaaccatttctgaatttat 31762966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 53865198 - 53865250
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  53865198 agtatatctaatggttttggagtacaactcacagaaaccatttctggatttat 53865250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 21097759 - 21097801
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  21097759 agtatatctaatggttttggagtacaactcacagaaaccattt 21097801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 30779432 - 30779380
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||    
T  30779432 agtatatctaatggttttgaagtacaactcacagagaccatttatggatttat 30779380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 38563894 - 38563842
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| | |||||||||||| ||||||    
T  38563894 agtacatctaatggttttggagtacaactcacacaaaccatttatggatttat 38563842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 6385841 - 6385799
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  6385841 agtacatctaatggttttggagtacaactcatagaaaccattt 6385799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 9553133 - 9553091
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  9553133 agtacatctaatggttttggagtacaactcacagaaaccattt 9553091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 22180623 - 22180581
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  22180623 agtacatctaatggttttggagtacaactcacagaaaccattt 22180581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 50644475 - 50644517
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  50644475 agtaaatctaatggttttggagtacaactcacagaaaccattt 50644517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 27764912 - 27764949
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||||| |||||||||||    
T  27764912 atctaatggttttggagtacaactcacagaaaccattt 27764949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 33883383 - 33883330
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttata 270  Q
    |||| ||||||| |||||||||||||||||| | ||||||||| ||||||||||    
T  33883383 agtacatctaatagttttggagtacaactcacaaaaaccatttctgaatttata 33883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 1492816 - 1492868
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||||||||| |||||| | ||||||||| |||||||||    
T  1492816 agtacatctaatggttttggagtataactcacaaaaaccatttttgaatttat 1492868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 2124433 - 2124381
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||| ||||||||||| | ||||||||| |||||||||    
T  2124433 agtacatctaatggttttgaagtacaactcacataaaccatttttgaatttat 2124381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 38010665 - 38010717
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| | |||| |||| |||||||||    
T  38010665 agtacatctaatggttttggagtacaactcacataaactatttctgaatttat 38010717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 8165846 - 8165799
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||| ||||||||| ||||||||||| || ||||||    
T  8165846 atctaatggttttggaatacaactcacagaaaccatttctggatttat 8165799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 29825977 - 29825934
Alignment:
Q  216 gagtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||    
T  29825977 gagtaaatctaatggttttggagtagaactcacagaaaccattt 29825934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 43852216 - 43852177
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaacca 256  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  43852216 agtacatctaatggttttggagtacaactcacagaaacca 43852177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 53526412 - 53526459
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||| ||||||||||||||||| |||||||||||  ||||||||    
T  53526412 atctaatgattttggagtacaactcatagaaaccatttcggaatttat 53526459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 4169045 - 4169087
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  4169045 agtacatctaatgattttggagtacaactcacagaaaccattt 4169087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 4169178 - 4169220
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||| | ||||||||| |||||||||||    
T  4169178 agtatatctaatggttttgtactacaactcacagaaaccattt 4169220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 16474911 - 16474873
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaacc 255  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  16474911 agtacatctaatggttttggagtacaactcacagaaacc 16474873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 21097891 - 21097933
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  21097891 agtacatctaatggttttggagtacaactcacataaaccattt 21097933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 22180490 - 22180448
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  22180490 agtacatctaatggttttggagtacaactcacataaaccattt 22180448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 30358609 - 30358651
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| ||||||||||||| |||||||||||| |||||||||||    
T  30358609 agtacatctaatggttttagagtacaactcacagaaaccattt 30358651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 36309572 - 36309614
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||| ||||||||||| |||||||||||    
T  36309572 agtacatctaatggttttgaagtacaactcacagaaaccattt 36309614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 38010489 - 38010531
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  38010489 agtacatctaatggttttggagtacaactcacaaaaaccattt 38010531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 49137400 - 49137358
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  49137400 agtacatctaatggttttggagtacaactcacataaaccattt 49137358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 1492720 - 1492753
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  1492720 aatggttttggagtacaactcacagaaaccattt 1492753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 6768451 - 6768484
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  6768451 aatggttttggagtacaactcatagaaaccattt 6768484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 6806523 - 6806556
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  6806523 aatggttttggagtacaactcaaagaaaccattt 6806556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 8165962 - 8165925
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  8165962 atctaatggttttggaatacaactcacagaaaccattt 8165925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 8166074 - 8166041
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  8166074 aatggttttggagtacaactcacagaaaccattt 8166041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 12722934 - 12722901
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  12722934 aatggttttggagtacaactcacagaaaccattt 12722901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 16475016 - 16474983
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  16475016 aatggttttggagtacaactcacagaaaccattt 16474983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 21995718 - 21995751
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  21995718 aatggttttggagtacaactcacagaaaccattt 21995751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 29826100 - 29826067
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  29826100 aatggttttggagtacaactcacagaaaccattt 29826067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 31763104 - 31763071
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  31763104 aatggttttggagtacaactcacagaaaccattt 31763071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 38010541 - 38010574
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  38010541 aatggttttggagtacaactcacagaaaccattt 38010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 50644350 - 50644383
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  50644350 aatggttttggagtacaactcacagaaaccattt 50644383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 54895452 - 54895485
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  54895452 aatggttttggagtacaactcacagaaaccattt 54895485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 17109808 - 17109756
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||| ||||||||| ||||| ||||| || ||||||    
T  17109808 agtacatctaatggttttggaatacaactcacagaaatcatttctggatttat 17109756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 38563957 - 38563925
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccatt 258  Q
    |||||||||||||||||||||| ||||||||||    
T  38563957 aatggttttggagtacaactcacagaaaccatt 38563925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 43375476 - 43375528
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||| |||||||||||| | ||| ||||| |||||||||    
T  43375476 agtacatctaatggttttagagtacaactcaaaaaaatcatttctgaatttat 43375528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 54895538 - 54895590
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||| | ||||||||| ||||||||||| || ||||||    
T  54895538 agtacatctaatggttttgaaatacaactcacagaaaccatttttggatttat 54895590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 28291 - 28333
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  28291 agtacatctaatggttttggagtacaactcagagaaaccattt 28333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 28432 - 28466
Alignment:
Q  225 taatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||| |||||||||||    
T  28432 taatggttttggagtacaactcacagaaaccattt 28466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 20710542 - 20710584
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  20710542 agtatatctaatggttttggagtacaactcacagaaaccattt 20710584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 12449143 - 12449091
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| | ||||||||| |||||||||    
T  12449143 agtacatctaatggttttggagtacaactcacaaaaaccatttctgaatttat 12449091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 37867310 - 37867362
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||| ||||||||||| |||||| ||||||||||| |||||||||    
T  37867310 agtatatctaatagttttggagtataactcacagaaaccatttctgaatttat 37867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 31711659 - 31711706
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||    
T  31711659 atctaatggttttggagtacaactcacaaaaaccatttctgaatttat 31711706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 34726688 - 34726641
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  34726688 atctaatggttttgaagtacaactcatagaaaccatttatggatttat 34726641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 20710414 - 20710451
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||||| |||||||||||    
T  20710414 atctaatggttttggagtacaactcacagaaaccattt 20710451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 30777384 - 30777332
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| | ||||||||| || ||||||    
T  30777384 agtacatctaatggttttggagtacaactcacataaaccatttctggatttat 30777332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 31783937 - 31783989
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  31783937 agtacatctaatggttttttagtacaactcacagaaaccatttctgaatttat 31783989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 42364648 - 42364700
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||| | ||||||||||| || ||||||    
T  42364648 agtacatctaatggttttggagtacaactaacagaaaccatttctggatttat 42364700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 22588402 - 22588355
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||| ||||||||||||||||| | ||||||||| |||||||||    
T  22588402 atctaatgattttggagtacaactcacaaaaaccatttctgaatttat 22588355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 3926151 - 3926193
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| ||||| |||||    
T  3926151 agtacatctaatggttttggagtacaactcacagaaatcattt 3926193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 3928203 - 3928245
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||| ||||||| |||||||||||    
T  3928203 agtacatctaatggttttggagtccaactcacagaaaccattt 3928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 4281105 - 4281063
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| ||||||||||||||||||| |||||| |||||||||||    
T  4281105 agtacatctaatggttttggagtataactcacagaaaccattt 4281063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 41345359 - 41345317
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  41345359 agtacatctaatggttttggagtacaactcacataaaccattt 41345317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 1095364 - 1095331
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  1095364 aatggttttggagtacaactcacagaaaccattt 1095331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 12449239 - 12449206
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  12449239 aatggttttggagtacaactcaaagaaaccattt 12449206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 30777522 - 30777489
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  30777522 aatggttttggagtacaactcacagaaaccattt 30777489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 31711558 - 31711591
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  31711558 aatggttttggagtacaactcacagaaaccattt 31711591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 36636210 - 36636173
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||||| | |||||||||    
T  36636210 atctaatggttttggagtacaactcacaaaaaccattt 36636173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 42364540 - 42364573
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  42364540 aatggttttggagtacaactcacagaaaccattt 42364573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 20661485 - 20661441
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttat 261  Q
    |||| |||||||||||||||| ||||||||| | |||||||||||    
T  20661485 agtacatctaatggttttggaatacaactcacaaaaaccatttat 20661441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 23225985 - 23226037
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||| | |||||| ||||||||| ||||||||||| |||||||||    
T  23225985 agtacatctaatagctttggaatacaactcacagaaaccatttctgaatttat 23226037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 24183486 - 24183434
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||| ||||||||| | ||||||||| || ||||||    
T  24183486 agtacatctaatggttttggaatacaactcacataaaccatttctggatttat 24183434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 9599 - 9547
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  9599 agtacatctaatggttttggagtataactcacagaaaccatttctgaatttat 9547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 36185815 - 36185763
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  36185815 agtacatctaatggttttggagtacaactcacagaaaccatttctggatttat 36185763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 9183829 - 9183787
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  9183829 agtacatctaatggttttggagtacaactcacagaaaccattt 9183787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 47728942 - 47728984
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  47728942 agtacatctaatggttttggagtacaactcatagaaaccattt 47728984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 53595429 - 53595471
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  53595429 agtacatctaatggttttggagtacaactcacagaaaccattt 53595471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 21175223 - 21175275
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||||||||||||||||||| |||||| |||| || ||||||    
T  21175223 agtacatctaatggttttggagtacaactcacagaaactatttctggatttat 21175275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 49053314 - 49053262
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||| |||||| ||||||||||| ||||||||||| |||||||||    
T  49053314 agtacatctaatagttttgaagtacaactcacagaaaccatttctgaatttat 49053262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 19012526 - 19012569
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||||||||||||||||| ||||||||||| || ||||||    
T  19012526 aatggttttggagtacaactcacagaaaccatttctggatttat 19012569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 47225808 - 47225855
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||||| |||||||||||| ||||||||||| || ||||||    
T  47225808 atctaatggttttagagtacaactcacagaaaccatttctggatttat 47225855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 8718886 - 8718928
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  8718886 agtacatctaatgattttggagtacaactcacagaaaccattt 8718928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 9070773 - 9070815
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||| ||||||||||||||||| |||||||||||    
T  9070773 agtacatctaatgattttggagtacaactcacagaaaccattt 9070815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 16276964 - 16276922
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| ||||||| |||||||||||||||||| |||||||||||    
T  16276964 agtacatctaatagttttggagtacaactcacagaaaccattt 16276922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 23699862 - 23699904
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||| ||||||||| |||||||||||    
T  23699862 agtacatctaatggttttggaatacaactcacagaaaccattt 23699904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 23718317 - 23718359
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||| ||||||||| |||||||||||    
T  23718317 agtacatctaatggttttggaatacaactcacagaaaccattt 23718359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 23736773 - 23736815
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||| ||||||||| |||||||||||    
T  23736773 agtacatctaatggttttggaatacaactcacagaaaccattt 23736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 23756046 - 23756088
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||| ||||||    
T  23756046 agtacatctaatggttttggagtacaactcacagaagccattt 23756088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 34562671 - 34562629
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  34562671 agtacatctaatggttttggagtacaactcacataaaccattt 34562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 39194616 - 39194574
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  39194616 agtacatctaatggttttggagtacaactcacataaaccattt 39194574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 51681484 - 51681442
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||| ||||||||||||||||||||| |||||||||||    
T  51681484 agtacatctcatggttttggagtacaactcacagaaaccattt 51681442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 23755922 - 23755955
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  23755922 aatggttttggagtacaactcacagaaaccattt 23755955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 28299565 - 28299532
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  28299565 aatggttttggagtacaactcacagaaaccattt 28299532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 34562797 - 34562764
Alignment:
Q  226 aatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  34562797 aatggttttggagtacaactcacagaaaccattt 34562764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 19384814 - 19384786
Alignment:
Q  217 agtatatctaatggttttggagtacaact 245  Q
    |||||||||||||||||||||||||||||    
T  19384814 agtatatctaatggttttggagtacaact 19384786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 28299611 - 28299575
Alignment:
Q  223 tctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||||  ||||||||||    
T  28299611 tctaatggttttggagtacaactcacggaaaccattt 28299575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 38345435 - 38345471
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaa 253  Q
    |||| |||||||||||||||||||||||||| |||||    
T  38345435 agtacatctaatggttttggagtacaactcacagaaa 38345471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 47924254 - 47924202
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| |||||||||| ||| ||||||||||| ||||||||||| || ||||||    
T  47924254 agtacatctaatggtattgaagtacaactcacagaaaccatttctggatttat 47924202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 14381 - 14423
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  14381 agtaaatctaatggttttggagtacaactcacagaaaccattt 14423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 14253 - 14290
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccattt 259  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14253 atctaatggttttggagtacaactcacagaaaccattt 14290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 203331 - 203289
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccattt 259  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  203331 agtatatttaatggttttggagtacaactcacagaaaccattt 203289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 23633 - 23581
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||||||||||||||||  |||||||||| || ||||||    
T  23633 agtacatctaatggttttggagtacaactcacggaaaccatttctggatttat 23581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 20009 - 19957
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| || ||||||    
T  20009 agtacatctaatggtttttgagtacaactcacagaaaccatttctggatttat 19957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 3114 - 3161
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||| |||||||||||||||||| ||||||||||| || ||||||    
T  3114 atctaatagttttggagtacaactcacagaaaccatttctggatttat 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 1208 - 1255
Alignment:
Q  222 atctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||||||| ||||||||||||||||| ||||||||||| || ||||||    
T  1208 atctaatgattttggagtacaactcacagaaaccatttctggatttat 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 15657 - 15613
Alignment:
Q  225 taatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    ||||||||||| ||||||||||| ||||||||||| || ||||||    
T  15657 taatggttttgaagtacaactcacagaaaccatttctggatttat 15613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 80756 - 80704
Alignment:
Q  217 agtatatctaatggttttggagtacaactcagagaaaccatttatgaatttat 269  Q
    |||| ||||||| ||||||| |||||||||| ||||||||||| || ||||||    
T  80756 agtacatctaatagttttggggtacaactcacagaaaccatttctggatttat 80704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University