View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6917_high_26 (Length: 202)
Name: NF6917_high_26
Description: NF6917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6917_high_26 |
 | |
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| [»] scaffold0433 (1 HSPs) |
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| [»] scaffold0031 (1 HSPs) |
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| [»] chr7 (6 HSPs) |
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| [»] chr5 (23 HSPs) |
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| [»] chr4 (12 HSPs) |
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| [»] chr2 (10 HSPs) |
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| [»] chr8 (10 HSPs) |
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| [»] chr1 (14 HSPs) |
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| [»] scaffold0553 (1 HSPs) |
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| [»] chr6 (14 HSPs) |
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| [»] chr3 (10 HSPs) |
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| [»] scaffold1705 (1 HSPs) |
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| [»] scaffold0014 (3 HSPs) |
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| [»] scaffold0141 (1 HSPs) |
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| [»] scaffold0706 (3 HSPs) |
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| [»] scaffold0058 (3 HSPs) |
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| [»] scaffold1468 (1 HSPs) |
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| [»] scaffold0265 (1 HSPs) |
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| [»] scaffold0018 (3 HSPs) |
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| [»] scaffold0406 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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Alignment Details
Target: scaffold0433 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold0433
Description:
Target: scaffold0433; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13470 - 13671
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
13470 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
13569 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
13570 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
13669 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
13670 |
aa |
13671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 111811 - 112012
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
111811 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
111910 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
111911 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
112010 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
112011 |
aa |
112012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27988540 - 27988339
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
27988540 |
caggcccatgcttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
27988441 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27988440 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatcttagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
27988341 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
27988340 |
aa |
27988339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 45553221 - 45553021
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
45553221 |
caggcccatgcttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccatctttccaccaac |
45553123 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
45553122 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttataagacttaactttt |
45553023 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
45553022 |
aa |
45553021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 19585797 - 19585600
Alignment:
| Q |
4 |
gctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactac |
103 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19585797 |
gctcatgcttcaaggagatttgcttgattcacatcagagtacacattatctctgatgcaagatctccttttgctagcttttccatctttccaccaactac |
19585698 |
T |
|
| Q |
104 |
actgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |
|
|
| T |
19585697 |
act-atcatggctggaagcatgtgcagaagtgaacattctaatctcagaatgttccatttgttcttactttaggttgatttttatgacttaacttttaa |
19585600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24540857 - 24541058
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |
|
|
| T |
24540857 |
caggcccatgcttcaaagagatttgcttgattttgttcagagtacacgttatctctgatgcaagatctccttttgctaacttttccatctttccaccaac |
24540956 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
24540957 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcataatgttccatttgttcttactttaggttgatttataagacttaactttt |
24541056 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
24541057 |
aa |
24541058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 192
Target Start/End: Complemental strand, 10415724 - 10415538
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||| ||||| | |||||| ||| |||||||| |
|
|
| T |
10415724 |
catgcttctaggagatttgcttgattttattcagagtacatgttatctctgatgcaagatctccttttgctacctttttcttctttctacctactacact |
10415625 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||| ||| | |||||||||| |||||| |||| |||||||||||||||||||||| |
|
|
| T |
10415624 |
gttcatagctggaagcatgtgcagaagtgaacattctgaccatcagaatgtttcatttgctcttcctttaggatgatttgtaagact |
10415538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 12770058 - 12769954
Alignment:
| Q |
89 |
ctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgta |
187 |
Q |
| |
|
|||||| ||||||||| ||||||| | |||||||||||||| |||||||| ||| | | |||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
12770058 |
ctttcctccaactacattgttcatagtatgaagcatgtgcagagatgaacattctgaccattagaatgttccatttgttcttac-ttaagatgatttgta |
12769960 |
T |
|
| Q |
188 |
agactt |
193 |
Q |
| |
|
|||||| |
|
|
| T |
12769959 |
agactt |
12769954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 23)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 18210042 - 18210243
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
18210042 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
18210141 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18210142 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
18210241 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
18210242 |
aa |
18210243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 18219380 - 18219581
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
18219380 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
18219479 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18219480 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
18219579 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
18219580 |
aa |
18219581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21681668 - 21681467
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
21681668 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
21681569 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21681568 |
tacattgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
21681469 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
21681468 |
aa |
21681467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 34130720 - 34130921
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
34130720 |
caggcccatgcttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaatatctccttttgctagctttttcatctttccaccaac |
34130819 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34130820 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttcttcttactttaggttgatttgtaagacttaactttt |
34130919 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
34130920 |
aa |
34130921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 37299045 - 37299246
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |
|
|
| T |
37299045 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagtttttccatctttccaccaac |
37299144 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
37299145 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttataagacttaactttt |
37299244 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
37299245 |
aa |
37299246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19888585 - 19888785
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
19888585 |
caggcccatgcttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccatctttccaccaac |
19888683 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
19888684 |
tacactgtttatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatctgtaagacttaactttt |
19888783 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
19888784 |
aa |
19888785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 31916837 - 31916636
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||| |
|
|
| T |
31916837 |
caggcccatgcttcaaggagatttgcttgattcatatcaaagtacacgttatctctgatgcaagatctccttttgctagcgtttccatctttccactaac |
31916738 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31916737 |
tacactgttcatggctggaagcatgtgcataagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
31916638 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
31916637 |
aa |
31916636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 37548836 - 37549036
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
37548836 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctttgatgcaagatctc-ttttgctagcttttccatctttccaccaac |
37548934 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
37548935 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttataagacttaactttt |
37549034 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
37549035 |
aa |
37549036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 37651640 - 37651834
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37651640 |
catgcttcaaggagatttgcttgattcatctcagagtacacgttatctttgatgcaagatctc-ttttgctagcttttccatctttccaccaactacact |
37651738 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
37651739 |
gttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttataagacttaacttttaa |
37651834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 4038210 - 4038411
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |
|
|
| T |
4038210 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtacacgttatctctgatgcaagatctccttttgctaacttttccatctttccaccaac |
4038309 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4038310 |
tacactgttcatggctgaaagcatgtgcagacgtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
4038409 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
4038410 |
aa |
4038411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 27274412 - 27274612
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
27274412 |
caggcccatgctttaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccatctttccaccaac |
27274510 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27274511 |
tacattgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
27274610 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
27274611 |
aa |
27274612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 37817625 - 37817424
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||| |
|
|
| T |
37817625 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagctttttgatcttttcaccaac |
37817526 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
37817525 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttctttctttaggttgatttgaaagacttaactttt |
37817426 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
37817425 |
aa |
37817424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 22173481 - 22173681
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||| |
|
|
| T |
22173481 |
caggcccatgcttcaaggagatttgttggattcatctcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccacctttccaccaac |
22173579 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
22173580 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttataagacttaactttt |
22173679 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
22173680 |
aa |
22173681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 30944054 - 30944217
Alignment:
| Q |
39 |
agagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaac |
138 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30944054 |
agagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagaagtgaac |
30944153 |
T |
|
| Q |
139 |
attatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
30944154 |
attctgatctcagaatgtttcatttgttcttactttaggttgatttataagacttaacttttaa |
30944217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 30953476 - 30953639
Alignment:
| Q |
39 |
agagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaac |
138 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30953476 |
agagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagaagtgaac |
30953575 |
T |
|
| Q |
139 |
attatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
30953576 |
attctgatctcagaatgtttcatttgttcttactttaggttgatttataagacttaacttttaa |
30953639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 13571927 - 13572111
Alignment:
| Q |
17 |
ggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggct |
116 |
Q |
| |
|
||||| ||||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13571927 |
ggagagttgctggattcatctcagagtacacgttatctctgatgcaagatttccttt-gctagcttttccatctttccaccaactacactgttcatggct |
13572025 |
T |
|
| Q |
117 |
ggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
13572026 |
ggaagcatgtgcagaaatgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgaaagacttaacttttaa |
13572111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 42090752 - 42090948
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| | |
|
|
| T |
42090752 |
catgcttcaatgagatttgcttgattcaaatcagaggacacgttatctctgatgcaagatctccttttgctagctttttcatctttccaccaactacatt |
42090851 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
|||||||| | |||||||||||||| |||||||| ||| | || ||||||| | |||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
42090852 |
gttcatggttagaagcatgtgcagaaatgaacattctgaccttcggaatgtttcttttgttcttactttagtttgatttttaagacttaacttttaa |
42090948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20764382 - 20764183
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||| |||||||||||||||| | || || |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
20764382 |
caggcccatgcttcaagtagatttgcttgattcaaaccaaaggacacgttatctctgatgcaagatttcattttgctagctttttcatctttccaccaac |
20764283 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
||| |||||||||||||||||| |||||| |||||||| ||| | ||| |||||| | ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20764282 |
tac---gttcatggctggaagcatatgcagaaatgaacattttgaccttcaaaatgtttcttttgttcttactttaggttgatttgtaagacttaacttt |
20764186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 205706 - 205898
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||| |||||||||||||||||||| ||| |||| ||| ||||||| || | | |||| ||||||| |
|
|
| T |
205706 |
caggcccatgcttctaggagatttgcttgattttgttcagagtacacgttatctctaatggaagatctccttttgctttgcttgctaacttttcaccaac |
205805 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||||||||| | | |||||||||||||| |||||||| ||| | |||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
205806 |
tacactgttcatagttagaagcatgtgcagagatgaacattctgaccatcagaatgtttcatttgctcttactttaggatgatttgtaagact |
205898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 20896891 - 20896785
Alignment:
| Q |
89 |
ctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatct-cagaatgttccatttgttcttactttaggatgatttgta |
187 |
Q |
| |
|
|||| |||||||||||||| |||| | | ||||| |||||||| |||||||| ||| || ||||||||||| ||| |||||||||||| |||||||||| |
|
|
| T |
20896891 |
cttttcaccaactacactgctcatagttagaagcttgtgcagagatgaacattctgaccttcagaatgttcctttttttcttactttagaatgatttgta |
20896792 |
T |
|
| Q |
188 |
agactta |
194 |
Q |
| |
|
||||||| |
|
|
| T |
20896791 |
agactta |
20896785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 20904849 - 20904955
Alignment:
| Q |
89 |
ctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatct-cagaatgttccatttgttcttactttaggatgatttgta |
187 |
Q |
| |
|
|||| |||||||||||||| |||| | | |||||||||||||| | | |||| ||| || || |||||||| ||| |||||||||||| |||||||||| |
|
|
| T |
20904849 |
cttttcaccaactacactgctcatagttagaagcatgtgcagagataaccattctgaccttcataatgttcctttttttcttactttagaatgatttgta |
20904948 |
T |
|
| Q |
188 |
agactta |
194 |
Q |
| |
|
||||||| |
|
|
| T |
20904949 |
agactta |
20904955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 31105343 - 31105271
Alignment:
| Q |
119 |
aagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||| |||||| | || |||||||||||||||||||| |
|
|
| T |
31105343 |
aagcatgtgcagagctgaacattatgatcatcagaatgttccttttgtt-tcac-ttaggatgatttgtaagact |
31105271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 21484164 - 21484238
Alignment:
| Q |
119 |
aagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagactt |
193 |
Q |
| |
|
||||||||||| | |||||||| ||||| ||||||||||||||||||| | || | ||||||||||||||||||| |
|
|
| T |
21484164 |
aagcatgtgcatagctgaacattgtgatcatcagaatgttccatttgttttcacct-aggatgatttgtaagactt |
21484238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16629558 - 16629357
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
16629558 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
16629459 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16629458 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
16629359 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
16629358 |
aa |
16629357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 7846785 - 7846985
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |
|
|
| T |
7846785 |
caggcccatgcttcaaggagatatgcttgattcatatcagagtacacgttatctctgatgcaagatctccttttgctagcttttccaactttccaccaac |
7846884 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
7846885 |
tatactgttcatggctggaagcatgtgcagaagtgaacattctgatcttcagaatgttccatttgttcttactttaggttgatttgtaagacttaaattt |
7846984 |
T |
|
| Q |
200 |
t |
200 |
Q |
| |
|
| |
|
|
| T |
7846985 |
t |
7846985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 17828568 - 17828731
Alignment:
| Q |
39 |
agagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaac |
138 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17828568 |
agagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagaagtgaac |
17828667 |
T |
|
| Q |
139 |
attatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
17828668 |
attctgatctcagaatgtttcatttgttcttactttaggttgatttataagacttaacttttaa |
17828731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 17837959 - 17838122
Alignment:
| Q |
39 |
agagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaac |
138 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17837959 |
agagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagaagtgaac |
17838058 |
T |
|
| Q |
139 |
attatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
17838059 |
attctgatctcagaatgtttcatttgttcttactttaggttgatttataagacttaacttttaa |
17838122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 16211203 - 16211403
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||| ||||| ||||||||||||||| |
|
|
| T |
16211203 |
caggcccatgcttctaggagatttgcttgattttgttcagagtacaagttatctctgatgcaagatctccttttgctacctttttcatctttccaccaac |
16211302 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||| ||| | ||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16211303 |
tacactgttcatagctggaagcatgtgcaggagtgaacattctgaccatcagaatgttctatttgttcttactttaggttgatttgtaagacttaacttt |
16211402 |
T |
|
| Q |
200 |
t |
200 |
Q |
| |
|
| |
|
|
| T |
16211403 |
t |
16211403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 44888781 - 44888590
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||| ||||| | |||||| |||||| |
|
|
| T |
44888781 |
caggctcatgcttctaggagatttgcttgattttgttcaaagtacacgttatctctgatgcaagatctccttttgctacctttttcttctttctaccaac |
44888682 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagac |
191 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||| ||| | |||||||||| |||||| |||||||||| ||||||||||||||| |
|
|
| T |
44888681 |
tacactgttcatagctggaagcatgtgcagaagtgaacattctgaccatcagaatgtttcatttgctcttactttatgatgatttgtaagac |
44888590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 53946319 - 53946511
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
|||| ||||| ||| |||||||||||| |||| |||||||||| ||||| |||||||||||| ||| |||||||| ||||| | |||||| |||||| |
|
|
| T |
53946319 |
caggttcatgcttctaggagatttgctagattttgttcagagtacaagttatatctgatgcaagatctccttttgctaactttttcttctttctaccaac |
53946418 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||||||||| | | ||||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||||||||||||||| |||| |
|
|
| T |
53946419 |
tacactgttcatagttagaagcatgtgcaggagtgaacattctgatcatcagaatgtttcatttgatcttactttaggatgatttgtaggact |
53946511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 16396912 - 16396756
Alignment:
| Q |
37 |
tcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtga |
136 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||| ||||||| || | | |||| ||||||||||||| ||||| | | |||||||||| ||| ||| |
|
|
| T |
16396912 |
tcagagtacaagttatctctgatgcaagatctccttttgctttgcttgctaacttttcaccaactacactattcatagttagaagcatgtgtagagatga |
16396813 |
T |
|
| Q |
137 |
acattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||| ||| | |||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
16396812 |
acattctgaccatcagaatgtttcatttgctcttactttaggatgatttgtaagact |
16396756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 2829551 - 2829395
Alignment:
| Q |
37 |
tcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtga |
136 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||| ||| | | |||| ||||||||||| ||||||| | | ||||||||||| | ||| |
|
|
| T |
2829551 |
tcagagtacacgttatctctgatgcaagatctccttttgctttgtttgctaacttttcaccaactacattgttcatagttaaaagcatgtgcaaagatga |
2829452 |
T |
|
| Q |
137 |
acattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
| ||| ||| | ||| |||||| |||||| | |||||||| |||||||||||||||| |
|
|
| T |
2829451 |
aaattctgaccatcaaaatgtttcatttgcttttactttaagatgatttgtaagact |
2829395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 1293288 - 1293213
Alignment:
| Q |
118 |
gaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagactt |
193 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||||||||||||| | || |||| || ||||||||||||| |
|
|
| T |
1293288 |
gaagcatgtgcagagctgaacattttgatcatcagaatgttccatttgttttcac-ttagtattatttgtaagactt |
1293213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 9836197 - 9836269
Alignment:
| Q |
119 |
aagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||||||||||| |||||||| ||||| |||||||||||| |||||| | |||| |||||||||||||||||| |
|
|
| T |
9836197 |
aagcatgtgcagagctgaacattctgatcgtcagaatgttccttttgtt-tcactt-aggatgatttgtaagact |
9836269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 14600870 - 14600914
Alignment:
| Q |
148 |
tcagaatgttccatttgttcttactttaggatgatttgtaagactt |
193 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
14600870 |
tcagaatgttccatttgtttttac-ataggatgatttgtaagactt |
14600914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 45190862 - 45190661
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
45190862 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
45190763 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
45190762 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
45190663 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
45190662 |
aa |
45190661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 37863052 - 37863245
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
37863052 |
caggctcatgcttcaaggagatttgcttgattcatatcagagtacacgttatctcttatgcaagatttcattttgctagctttttcatctttccaccaac |
37863151 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagactta |
194 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37863152 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagactta |
37863245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 574285 - 574084
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |
|
|
| T |
574285 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtacacgttatctctgatgcaagatctccttttgctaacttttccatctttccaccaac |
574186 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
574185 |
cacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
574086 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
574085 |
aa |
574084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16934321 - 16934522
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
16934321 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtaaatgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
16934420 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
16934421 |
tacactgttcatggctggaagcatgtacagaagtgaacattctgatctcagaatgttcaatttgttcttactttaggttgatctgtaagacttaactttt |
16934520 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
16934521 |
aa |
16934522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 17004981 - 17005182
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
17004981 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtaaatgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
17005080 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
17005081 |
tacactgttcatggctggaagcatgtacagaagtgaacattctgatctcagaatgttcaatttgttcttactttaggttgatctgtaagacttaactttt |
17005180 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
17005181 |
aa |
17005182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 22687715 - 22687903
Alignment:
| Q |
15 |
aaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatgg |
114 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| |||| |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
22687715 |
aaggagattttcttgattcatatcagaggacacgttacctcttatgcaagatctccttttgctagctttttcatctttccaccaactacactgttcattg |
22687814 |
T |
|
| Q |
115 |
ctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
22687815 |
ctggaagcatgtgcagaagtgaacattctgatcttcaaaatgttccatttgttcttactttaggtttatttgtaagacttaacttttaa |
22687903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 12570607 - 12570410
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12570607 |
catgcttcaaggagatttgcttgattcaaatcagagtacacgttatctctgatgcaagatcttcttttgctagctttttcatctttccaccaactacact |
12570508 |
T |
|
| Q |
107 |
gttc--atggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
|||| || |||||||||||||||||| |||||||| ||| | |||||||||| || || ||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
12570507 |
gttcatatagctggaagcatgtgcagaaatgaacattctgaccttcagaatgtttca-ttcttcttactttaagttgatttgtaagacttaacttttaa |
12570410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 3605971 - 3606144
Alignment:
| Q |
19 |
agatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctgg |
118 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||| ||| |||||||| ||||| |||||| |||||||||||||||||| ||||| |
|
|
| T |
3605971 |
agatttgcttgattttgttcagagtacatgttatctctgatgcaagttctccttttgctacctttttt-tctttctaccaactacactgttcatagctgg |
3606069 |
T |
|
| Q |
119 |
aagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||||||||||| | ||||||| ||| | |||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
3606070 |
aagcatgtgcagaagagaacattctgaccatcagaatgtttcatttgctcttactttaggatgatttgtaagact |
3606144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 24942794 - 24942751
Alignment:
| Q |
159 |
catttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24942794 |
catttgttcttactttaggttgatttgtaagacttaacttttaa |
24942751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 24239168 - 24239243
Alignment:
| Q |
118 |
gaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagactt |
193 |
Q |
| |
|
|||||||||||| | |||||||| ||||| | ||||||||||||||||| | |||| ||||||||||||||||||| |
|
|
| T |
24239168 |
gaagcatgtgcaaagctgaacattctgatcattagaatgttccatttgttttcactt-aggatgatttgtaagactt |
24239243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 13674279 - 13674078
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
13674279 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
13674180 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
13674179 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgtttcatttgttcttactttaggttgatttataagacttaactttt |
13674080 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
13674079 |
aa |
13674078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31999275 - 31999475
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||| |
|
|
| T |
31999275 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttt-gctagcttttcgatctttccaccaac |
31999373 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31999374 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
31999473 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
31999474 |
aa |
31999475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 33774165 - 33774366
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| || |
|
|
| T |
33774165 |
caggcccatgcttcaaggagatttgcttgattcatataagagtacacgttatctctgatgcaagatctccttctgctagcttttccatctttccactaat |
33774264 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33774265 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
33774364 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
33774365 |
aa |
33774366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 14881722 - 14881922
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
14881722 |
caggcccatgcttcaaggagatttgctggattcatctcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccatctttccaccaac |
14881820 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
14881821 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttataagacttaactttt |
14881920 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
14881921 |
aa |
14881922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 14894072 - 14894272
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
14894072 |
caggcccatgcttcaaggagatttgctggattcatctcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccatctttccaccaac |
14894170 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
14894171 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttataagacttaactttt |
14894270 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
14894271 |
aa |
14894272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20531353 - 20531554
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||| ||||| || |||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
20531353 |
caggcccatgcttcaaggagatttgctttattcaaattagaggacacgttatctctgatgcaagatctccttttgctagctttttcatctttccaccaac |
20531452 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
20531453 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcgtactttaggttgatttgtaagacttaactttt |
20531552 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
20531553 |
aa |
20531554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 23015047 - 23015228
Alignment:
| Q |
12 |
ttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttca |
111 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||| | |||||| |||||||||||| |||| |
|
|
| T |
23015047 |
ttcaaggagatttgcttgattttattcagagtacacgttatctctgatgcaagatctccctttgctatctttttcttctttctaccaactacactattca |
23015146 |
T |
|
| Q |
112 |
tggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
| |||||||||||||||| | ||||||||| ||| | |||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
23015147 |
tagctggaagcatgtgcaaaagtgaacattctgaccatcagaatgtttcatttgctcttactttaggatgatttgtaagact |
23015228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 11430728 - 11430883
Alignment:
| Q |
37 |
tcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtga |
136 |
Q |
| |
|
|||||||||| ||||||||| |||||||| ||| |||||||| ||||| | |||||| |||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
11430728 |
tcagagtacaagttatctcttatgcaagatctccttttgctacctttttcttctttctaccaactacactgttcatagctggaagcatgtgcaggagtga |
11430827 |
T |
|
| Q |
137 |
acattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||| ||| | |||| || || |||||| ||||||||||||||||||||||||||| |
|
|
| T |
11430828 |
acattctgaccatcag-atttttcatttgatcttactttaggatgatttgtaagact |
11430883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 60 - 200
Target Start/End: Complemental strand, 5759367 - 5759233
Alignment:
| Q |
60 |
gcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatct-cagaatgttc |
158 |
Q |
| |
|
|||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||| || |||||||||| |
|
|
| T |
5759367 |
gcaagatctccttttgctagctttttcatctttccaccaactacactgtt-------ggaagcatgtgcagaaatgaacattctgaccttcagaatgttc |
5759275 |
T |
|
| Q |
159 |
catttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||||||||||| |
|
|
| T |
5759274 |
catttgttcttactttaggttaatttgcaagacttaactttt |
5759233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 7757694 - 7757622
Alignment:
| Q |
119 |
aagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||||||||||| |||||||| ||| | |||||||||||||| |||| |||||| |||||||||||||||||| |
|
|
| T |
7757694 |
aagcatgtgcagagctgaacattttgaccatcagaatgttccatctgtt-ttactt-aggatgatttgtaagact |
7757622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 20318084 - 20318279
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
20318084 |
catgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatttttccaccaactacact |
20318183 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
20318184 |
gttcatggctggaagcatgtgcagaagtgaacattctgatcttagaatgttccatttgttcttactttaggttgatttgtaagacttaacttttaa |
20318279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27066114 - 27065913
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
27066114 |
caggcccatgcttaaaggagatttgcttgattcatctcagagtacacgttatctctgacgcaagatctccttttgctagcttttccatctttccaccaac |
27066015 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27066014 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatatcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
27065915 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
27065914 |
aa |
27065913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20308894 - 20308694
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||| |
|
|
| T |
20308894 |
caggcccatgcttcaaagagatttgcttgattcatatcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccatcttttcaccaac |
20308796 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20308795 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatttcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
20308696 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
20308695 |
aa |
20308694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26193474 - 26193675
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
26193474 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtacacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
26193573 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26193574 |
tacactgttcatggctggaaacatgtgcagaagtgaacattctgatttcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
26193673 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
26193674 |
aa |
26193675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 20328428 - 20328603
Alignment:
| Q |
27 |
ttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgt |
126 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20328428 |
ttgattcatctcagagtacacgttatctctgatgcatgatctccttttgctagcttttccatttttccaccaactacactgttcatggctggaagcatgt |
20328527 |
T |
|
| Q |
127 |
gcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
20328528 |
gcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaacttttaa |
20328603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 37012014 - 37011837
Alignment:
| Q |
16 |
aggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggc |
115 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||||||| ||||| | |||||| |||||||||||||||||| || |
|
|
| T |
37012014 |
aggagatttgcttgattttgttcagagtacacgttatctctgatgcaatatctccttttgctacctttttcttctttctaccaactacactgttcatagc |
37011915 |
T |
|
| Q |
116 |
tggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||||||||||||| ||||||||| ||| | |||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
37011914 |
tggaagcatgtgcagaagtgaacattctgaccatcagaatgtttcatttgctcttactttaggatgatttgtaagact |
37011837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 22960903 - 22960724
Alignment:
| Q |
16 |
aggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggc |
115 |
Q |
| |
|
||||||||||||||| | |||||| ||| |||||||||||||||||| ||| |||| ||| ||||| ||||||||||||||||||| ||||||| || |
|
|
| T |
22960903 |
aggagatttgcttgaatttgttcagaggacaagttatctctgatgcaagatctcctttttctacctttttcatctttccaccaactacattgttcatagc |
22960804 |
T |
|
| Q |
116 |
tggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagactta |
194 |
Q |
| |
|
|||||||||||||||| | |||||| ||| | |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22960803 |
tggaagcatgtgcagagattaacattctgaccatcagaatgttccttttgttcttactttaggatgatttgtaagactta |
22960724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 25823501 - 25823676
Alignment:
| Q |
18 |
gagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctg |
117 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||| || ||| |||||||| ||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
25823501 |
gagatttgcttgattttgttcagagtacaagttatctctgatgcatgatctccttttgctacctttttcatctttccaccaactacactgttcatagctg |
25823600 |
T |
|
| Q |
118 |
gaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||||| ||| | |||||||| ||| | |||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
25823601 |
gaagcatgcgcatagatgaacattctgaccatcagaatgtttcatttgctcttactttaggatgatttgtaagact |
25823676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 20314472 - 20314378
Alignment:
| Q |
108 |
ttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
20314472 |
ttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttacgttaggttgatttgtaagacttaacttttaa |
20314378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 60 - 194
Target Start/End: Original strand, 18097025 - 18097160
Alignment:
| Q |
60 |
gcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttc |
158 |
Q |
| |
|
|||||| ||| |||| ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| | |||||||| ||| | | ||||||||| |
|
|
| T |
18097025 |
gcaagatctcttttttctagctttttcatctttccaccaactacactattcatagctggaagcatgtgcaaagatgaacattctgaccattagaatgttc |
18097124 |
T |
|
| Q |
159 |
catttgttcttactttaggatgatttgtaagactta |
194 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18097125 |
cttttgttcttactttaggatgatttgtaagactta |
18097160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 7 - 192
Target Start/End: Complemental strand, 49333366 - 49333180
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| ||| |||||||||||| |||| |||||||||| ||||||||||||| |||| ||| |||||||| ||||| | |||||| | |||||||| | |
|
|
| T |
49333366 |
catgcttctaggagatttgctagattttgttcagagtacaagttatctctgatgtaagatctccttttgctacctttttcttctttctatcaactacatt |
49333267 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||| |||||||| |||||||| ||||||||| ||| | |||||||||| |||||| ||||||||||| ||||||||||||||| |
|
|
| T |
49333266 |
gttcatagctggaaggatgtgcaggagtgaacattctgaccatcagaatgtttcatttgatcttactttagaatgatttgtaagact |
49333180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 25039448 - 25039617
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||| | || | | |||| ||||||| |
|
|
| T |
25039448 |
caggcccatgcttctaggagatttgcttgattttgttcagagtacaagttatctctgatgcaagatctccttttgttttgcttgctaacttttcaccaac |
25039547 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatga-tctcagaatgttccatttgttctt |
169 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
25039548 |
tacactgttcgtagctggaagcatgtgcaagagtgaacattctgacattcagaatgttccatttgttctt |
25039617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 21821482 - 21821661
Alignment:
| Q |
16 |
aggagatttgcttgattcatatcagagtacacgt-tatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatgg |
114 |
Q |
| |
|
||||||||| |||||||| |||| || ||| || ||||||||| |||||||||| ||||||| || | | |||| ||||||||||| || |||| | |
|
|
| T |
21821482 |
aggagattttcttgattctgatcaaaggacatgtatatctctga-gcaagagctccttttgctttgcttgctaacttttcaccaactacagtgctcatag |
21821580 |
T |
|
| Q |
115 |
ctggaagcatgtgcagacgtgaacattatgatct-cagaatgttccatttgttcttactttaggatgatttgtaagactta |
194 |
Q |
| |
|
| |||||||||||||| |||||||| | | || ||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
21821581 |
ttagaagcatgtgcagagatgaacattctaaccttcagaatgttcctttttttcttactttaggatgatttgtaagactta |
21821661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 192
Target Start/End: Original strand, 41544128 - 41544312
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| ||| ||| ||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||| || | | ||| ||||||||| | | |
|
|
| T |
41544128 |
catgcttctaggcgatttgcttgattttgttcagagtacaagttatctctgatgcaagatctccttttgctttgcttgctaaattttcaccaactatatt |
41544227 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||| | | |||||||||||||| |||||||| ||| | |||||||||||||| |||| | || |||||||||||||||||||| |
|
|
| T |
41544228 |
gttcatagttagaagcatgtgcagagctgaacattctgaccatcagaatgttccatctgtt-tcac-ttaggatgatttgtaagact |
41544312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0553 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0553
Description:
Target: scaffold0553; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 886 - 1087
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
886 |
caggcccatgcttcatggagatttgcttgattcatatcagagtacactttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
985 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
986 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatcttagaatattccatttgttcttactttaggttgatttgtaagacttaactttt |
1085 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
1086 |
aa |
1087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24505435 - 24505636
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| |
|
|
| T |
24505435 |
caggctcatgcttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagatatccttttgctagcttttccatctttctaccaac |
24505534 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24505535 |
tacactgttcatggatggaaacatgtgcagaagtaaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
24505634 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
24505635 |
aa |
24505636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 26168394 - 26168193
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| |||| || | |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
26168394 |
caggcccatgcttcaaggagatttgcttgattcaaatcataggatacgttatctctgatgcaagatctccttttgctagctttttcatctttccaccaac |
26168295 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26168294 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
26168195 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
26168194 |
aa |
26168193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26021139 - 26021340
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagctttt-ccatctttccaccaa |
99 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||||||||| |
|
|
| T |
26021139 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacattatctctgatgcaagatctcattt-gctagctttttccatctttccaccaa |
26021237 |
T |
|
| Q |
100 |
ctacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
26021238 |
ctacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgattgataagacttaacttt |
26021337 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
26021338 |
taa |
26021340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1596481 - 1596280
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
1596481 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtacatgttatctccaatgcaagatctccttttgctagcttttccatctttccaccaac |
1596382 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1596381 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
1596282 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
1596281 |
aa |
1596280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16321336 - 16321134
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| |||| || | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
16321336 |
caggcccatgcttcaaggagatttgcttgattcaaatcaaaggatacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
16321237 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16321236 |
tgtactgttcatggctggaagcatgtgcagaagtgaacattctgatcttcagaatgttcaatttgttcttactttaggttgatttgtaagacttaacttt |
16321137 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
16321136 |
taa |
16321134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16333484 - 16333282
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| |||| || | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
16333484 |
caggcccatgcttcaaggagatttgcttgattcaaatcaaaggatacgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
16333385 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16333384 |
tgtactgttcatggctggaagcatgtgcagaagtgaacattctgatcttcagaatgttcaatttgttcttactttaggttgatttgtaagacttaacttt |
16333285 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
16333284 |
taa |
16333282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 791253 - 791455
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||| | |||||||| |||||||||||||||||| ||| |||||||||||||| | ||||||||||||| |
|
|
| T |
791253 |
caggcccatgcttccaggagatttgcttgattttgttaagagtacaagttatctctgatgcaagatctccttttgctagctttttcttctttccaccaac |
791352 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
791353 |
tacactgttcatggctggaagcatgtgcaggagtgaacattctgatcttcagaatgttccatttgttcttactttaggttgatttgtaagacttaacttt |
791452 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
791453 |
taa |
791455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 18712306 - 18712508
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| || |||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
18712306 |
caggcccatgcttcaaggagatttgcttgattcaaataagaggacacgttatctctgatgcaagatctccttttgctagcttttacatctttccaccaac |
18712405 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
|||||||||||||| || ||||||||||||| |||||||| ||| | |||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
18712406 |
tacactgttcatggttgaaagcatgtgcagaaatgaacattctgaccttcagaatgtttcatttgttcttactttaggttgatttgtaagacttgacttt |
18712505 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
18712506 |
taa |
18712508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 26161877 - 26161731
Alignment:
| Q |
56 |
tgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatg |
155 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
26161877 |
tgatgcaagatctccttttgctagctttttcatctttccaccaactacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatg |
26161778 |
T |
|
| Q |
156 |
ttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26161777 |
ttccatttgttcttactttaggttgatttgtaagacttaacttttaa |
26161731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 17824138 - 17823946
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||| ||||||||||||| || |||||||||||||||||||||||||| ||| ||||||| ||||| | |||||| |||||| |
|
|
| T |
17824138 |
caggcacatgcttcaaggggatttgcttgattttgttcggagtacacgttatctctgatgcaagatctccctttgctatctttttcttctttctaccaac |
17824039 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||| ||||| |||||||||||||||| | ||||||||| ||| | |||||||||| |||||| ||||||||||||||||| ||||||||| |
|
|
| T |
17824038 |
tacactattcatagctggaagcatgtgcaaaagtgaacattctgaccatcagaatgtttcatttgctcttactttaggatgatatgtaagact |
17823946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 30658255 - 30658360
Alignment:
| Q |
88 |
tctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgt |
186 |
Q |
| |
|
|||||| |||||||||||||||| | |||||||||||||||||| ||||||||| ||| | |||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
30658255 |
tctttctaccaactacactgttcgtagctggaagcatgtgcagaagtgaacattctgaccatcagaatgtttcatttgctcttactttaggatgatttgt |
30658354 |
T |
|
| Q |
187 |
aagact |
192 |
Q |
| |
|
|||||| |
|
|
| T |
30658355 |
aagact |
30658360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 192
Target Start/End: Complemental strand, 16923615 - 16923424
Alignment:
| Q |
2 |
aggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaact |
101 |
Q |
| |
|
|||| |||| ||| |||||||||| |||||| |||| |||||||||||||||||||||||| ||| ||||||| || | | ||| || ||||| |
|
|
| T |
16923615 |
aggcccatgcttctaggagatttgtttgattttgttcagtgtacacgttatctctgatgcaagatctccttttgctttgcttgctaaattttcatcaact |
16923516 |
T |
|
| Q |
102 |
acactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||||||| | | | ||||||||||||| |||||||| ||| | | |||||||| |||||| |||||||||| |||||||||||||||| |
|
|
| T |
16923515 |
acactgttcgtagttaaaagcatgtgcagagatgaacattctgaccataagaatgtttcatttgctcttactttaagatgatttgtaagact |
16923424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 30658163 - 30658230
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcatttt |
74 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
30658163 |
catgcttctaggagatttgcttgattttgttcagagtacacgttatctctgatgcaagatctcctttt |
30658230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 27787698 - 27787770
Alignment:
| Q |
119 |
aagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||||||||||||| |||||||| ||||| |||||||||||| |||||| | |||| |||||||||||||||||| |
|
|
| T |
27787698 |
aagcatgtgcagagctgaacattctgatcatcagaatgttccttttgtt-tcactt-aggatgatttgtaagact |
27787770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19828268 - 19828469
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |
|
|
| T |
19828268 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttttgctagctttttgatctttccaccaac |
19828367 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
19828368 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgaaagacttaactttt |
19828467 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
19828468 |
aa |
19828469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20745101 - 20745301
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
20745101 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacacgttatctctgatgcaagatctccttt-gctagcttttccatctttccaccaac |
20745199 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20745200 |
tatactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
20745299 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
20745300 |
aa |
20745301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 2489596 - 2489797
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |
|
|
| T |
2489596 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtacatgttatctctgatgcaagatctccttttgctagtttttccatctttccaccaac |
2489695 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2489696 |
tacactgttcatggctagaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
2489795 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
2489796 |
aa |
2489797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13119995 - 13120196
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
13119995 |
caggcccatgcttcaaggagatttgcttgattttgttcagagtacatgttatctctgatgcaagatctccttttgctagcttttccatctttccaccaac |
13120094 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
13120095 |
tacaccgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatctgtaagacttaactttt |
13120194 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
13120195 |
aa |
13120196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 4783005 - 4783206
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagctttt-ccatctttccaccaa |
99 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||| |||||||||| ||||||||||||||| |
|
|
| T |
4783005 |
caggcccatgcttcaaggagatttgcttgattcatctcagagtacaggttatctctgatgcaagatctccttt-gctagctttttccatctttccaccaa |
4783103 |
T |
|
| Q |
100 |
ctacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4783104 |
ctacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcataatgttccatttgttcttactttaggttgatttataagacttaacttt |
4783203 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
4783204 |
taa |
4783206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 13112883 - 13113080
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||| |||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||| |
|
|
| T |
13112883 |
caggcccatgcttcaagaagatttgcttgattttgttcagagtacatgttatctctgatgcaagatctccttttgctagcttttccatcttcccaccaac |
13112982 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactt |
198 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
13112983 |
tacattgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatctataagacttaactt |
13113080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 18560926 - 18560811
Alignment:
| Q |
87 |
atctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgt |
186 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18560926 |
atctttccaccaactacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttactttaggttgatttga |
18560827 |
T |
|
| Q |
187 |
aagacttaacttttaa |
202 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
18560826 |
aagacttaacttttaa |
18560811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20293061 - 20292931
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| || |||| |||||||||||||||||||||| | | |||||||||||||| ||||||||||||||| |
|
|
| T |
20293061 |
caggcccatgcttcaaggagatttgcttgattcaaattagaggacacgttatctctgatgcaagatccccttttgctagctttttcatctttccaccaac |
20292962 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcaga |
131 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |
|
|
| T |
20292961 |
tacattgttcatggctggaagcatgtgcaga |
20292931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 51978805 - 51978983
Alignment:
| Q |
16 |
aggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatggc |
115 |
Q |
| |
|
|||||||||||| |||| |||||||||| |||||||||||||||||| ||| |||||||| |||| | |||||| |||||||||||||||||| || |
|
|
| T |
51978805 |
aggagatttgctagattttgttcagagtacaagttatctctgatgcaagatctccttttgctacatttttcttctttctaccaactacactgttcatagc |
51978904 |
T |
|
| Q |
116 |
tgg-aagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
||| || |||||||| ||||| ||| ||| | |||||||||| |||||| |||||||||||||||||||| |||||| |
|
|
| T |
51978905 |
tggaaaacatgtgcatgagtgaatattctgaccatcagaatgtttcatttgctcttactttaggatgatttgcaagact |
51978983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 12376482 - 12376384
Alignment:
| Q |
97 |
caactacactgttcatggctggaagcatgtgcagacgtgaacattatgatct-cagaatgttccatttgttcttactttaggatgatttgtaagactta |
194 |
Q |
| |
|
|||||||||||||||| | | ||||||||||| | |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
12376482 |
caactacactgttcatagttaaaagcatgtgcaaagatgaacattctgaccttcagaatgttccttttgttcttactttaggatgatttgtaagactta |
12376384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1705 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: scaffold1705
Description:
Target: scaffold1705; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 892 - 697
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
892 |
catgcttcaaggagatttgcttgattttgttcagagtacacgttatctctgatgcaagatctccttttgctatcttttccatctttccaccaactacact |
793 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
792 |
gttcatggctggaagcatgtgtagaagtgaacattctgatctcagaatgttccatttgttcctactttaggttgatttgtaagacttaacttttaa |
697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 114543 - 114744
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||| |||||||| ||||||| ||||||||||||| |||||| | ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
114543 |
caggcccatgcttcaaggagatttgtttgattcaaatcagaggacacgttatctctaatgcaatatctccttttgctagctttttcatctttccaccaac |
114642 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttgtaagacttaactttt |
200 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
114643 |
tacactgttcatgactggaagcatgtgcagaagtgaacattctgatcttagaatgttccatttgttcttactttaggttgatttgtaagacttaactttt |
114742 |
T |
|
| Q |
201 |
aa |
202 |
Q |
| |
|
|| |
|
|
| T |
114743 |
aa |
114744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 146719 - 146517
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||| ||| | || |||| ||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
146719 |
caggcccatgcttcaaggagatttgcttaattaaaataagagaacaagttatctctgatgcaagatctccttttgctagctttttcatctttccaccaac |
146620 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
146619 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatcttcagaatgttccacttgttcttactttaggttgatttgtaagacttaacttt |
146520 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
146519 |
taa |
146517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 153630 - 153746
Alignment:
| Q |
86 |
catctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttactttaggatgatttg |
185 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| | | |||||||||||||||||||| |||||||||| | ||||| |
|
|
| T |
153630 |
catctttccaccaactacactattcatcgctggaagcatgtgcagaagtgaacattctaacctcagaatgttccatttgttattactttaggttcatttg |
153729 |
T |
|
| Q |
186 |
taagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
153730 |
taagacttaacttttaa |
153746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 18787 - 18585
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| | ||||||| |||| ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
18787 |
caggcccatgcttcaaggagatttgcttgatttaaatcagaggacacattatctctgatgcaagatctccttttgctagctttttcatctttccaccaac |
18688 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagacttaacttt |
199 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18687 |
tacactgttcatggctagaagcatgtgcagaagtgaacattctgatcttcagaatgttccatctgttcttactttaggttgatttgtaagacttaacttt |
18588 |
T |
|
| Q |
200 |
taa |
202 |
Q |
| |
|
||| |
|
|
| T |
18587 |
taa |
18585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0706 (Bit Score: 123; Significance: 2e-63; HSPs: 3)
Name: scaffold0706
Description:
Target: scaffold0706; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2003 - 2165
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaac |
100 |
Q |
| |
|
||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| |||||||||||||| |
|
|
| T |
2003 |
caggcccatgcttcaaggagatttgctagattcatatcagagtacacgttatctctgatgcaagatctccttttgctagattttaaatctttccaccaac |
2102 |
T |
|
| Q |
101 |
tacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccattt |
163 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
2103 |
tacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccattt |
2165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0706; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 4104 - 4147
Alignment:
| Q |
159 |
catttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4104 |
catttgttcttactttaggttgatttgtaagacttaacttttaa |
4147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0706; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 4317 - 4360
Alignment:
| Q |
159 |
catttgttcttactttaggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4317 |
catttgttcttactttaggttgatttgtaagacttaacttttaa |
4360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 116; Significance: 3e-59; HSPs: 3)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 23923 - 24050
Alignment:
| Q |
75 |
gctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttgttcttacttt |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23923 |
gctagcttttccatctttccaccaactacactgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttgttcttacttt |
24022 |
T |
|
| Q |
175 |
aggatgatttgtaagacttaacttttaa |
202 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
24023 |
aggttgatttgtaagacttaacttttaa |
24050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29328 - 29392
Alignment:
| Q |
1 |
caggctcatggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaaga |
65 |
Q |
| |
|
||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29328 |
caggcccatgcttcaaggagattttcttgattcatatcagagtacacgttatctctgatgcaaga |
29392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 41273 - 41331
Alignment:
| Q |
106 |
tgttcatggctggaagcatgtgcagacgtgaacattatgatctcagaatgttccatttg |
164 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
41273 |
tgttcatggctggaagcatgtgcagaagtgaacattctgatctcagaatgttccatttg |
41331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1468 (Bit Score: 75; Significance: 9e-35; HSPs: 1)
Name: scaffold1468
Description:
Target: scaffold1468; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 7 - 192
Target Start/End: Complemental strand, 1347 - 1161
Alignment:
| Q |
7 |
catggttcaaggagatttgcttgattcatatcagagtacacgttatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacact |
106 |
Q |
| |
|
|||| ||| |||||||||||| |||| |||||||||| ||||||||||||| |||| ||| |||||||| ||||| | |||||| | |||||||| | |
|
|
| T |
1347 |
catgcttctaggagatttgctagattttgttcagagtacaagttatctctgatgtaagatctccttttgctacctttttcttctttctatcaactacatt |
1248 |
T |
|
| Q |
107 |
gttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgtaagact |
192 |
Q |
| |
|
|||||| |||||||| |||||||| ||||||||| ||| | |||||||||| |||||| ||||||||||| ||||||||||||||| |
|
|
| T |
1247 |
gttcatagctggaaggatgtgcaggagtgaacattctgaccatcagaatgtttcatttgatcttactttagaatgatttgtaagact |
1161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0265
Description:
Target: scaffold0265; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 11327 - 11148
Alignment:
| Q |
16 |
aggagatttgcttgattcatatcagagtacacgt-tatctctgatgcaagagctcattttgctagcttttccatctttccaccaactacactgttcatgg |
114 |
Q |
| |
|
||||||||| |||||||| |||| || ||| || ||||||||| |||||||||| ||||||| || | | |||| ||||||||||| || |||| | |
|
|
| T |
11327 |
aggagattttcttgattctgatcaaaggacatgtatatctctga-gcaagagctccttttgctttgcttgctaacttttcaccaactacagtgctcatag |
11229 |
T |
|
| Q |
115 |
ctggaagcatgtgcagacgtgaacattatgatct-cagaatgttccatttgttcttactttaggatgatttgtaagactta |
194 |
Q |
| |
|
| |||||||||||||| |||||||| | | || ||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
11228 |
ttagaagcatgtgcagagatgaacattctaaccttcagaatgttcctttttttcttactttaggatgatttgtaagactta |
11148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 49; Significance: 3e-19; HSPs: 3)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 59973 - 59865
Alignment:
| Q |
87 |
atctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatct-cagaatgttccatttgttcttactttaggatgatttg |
185 |
Q |
| |
|
|||||||||||||||||| |||| || | | ||||||||||| || | |||||| ||| || |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
59973 |
atctttccaccaactacattgttgatagttagaagcatgtgcggagatcaacattctgaccttcagaatgttcattttgttcttactttaggatgatttg |
59874 |
T |
|
| Q |
186 |
taagactta |
194 |
Q |
| |
|
||||||||| |
|
|
| T |
59873 |
taagactta |
59865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 54593 - 54485
Alignment:
| Q |
87 |
atctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatctc-agaatgttccatttgttcttactttaggatgatttg |
185 |
Q |
| |
|
|||||||||||||||||| |||| || | | ||||||||||| || | |||||| ||| || ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
54593 |
atctttccaccaactacattgttgatagttagaagcatgtgcggagatcaacattctgacctttagaatgttcattttgttcttactttaggatgatttg |
54494 |
T |
|
| Q |
186 |
taagactta |
194 |
Q |
| |
|
||||||||| |
|
|
| T |
54493 |
taagactta |
54485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 58545 - 58437
Alignment:
| Q |
87 |
atctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatctc-agaatgttccatttgttcttactttaggatgatttg |
185 |
Q |
| |
|
|||||||||||||||||| |||| || | | ||||||||||| || | |||||| ||| || ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
58545 |
atctttccaccaactacattgttgatagttagaagcatgtgcggagatcaacattctgacctttagaatgttcattttgttcttactttaggatgatttg |
58446 |
T |
|
| Q |
186 |
taagactta |
194 |
Q |
| |
|
||||||||| |
|
|
| T |
58445 |
taagactta |
58437 |
T |
|
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Target: scaffold0406 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0406
Description:
Target: scaffold0406; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 15342 - 15238
Alignment:
| Q |
89 |
ctttccaccaactacactgttcatggctggaagcatgtgcagacgtgaacattatgatc-tcagaatgttccatttgttcttactttaggatgatttgta |
187 |
Q |
| |
|
||||||||||||||||||||| || | |||||||||||| | |||||||| ||| | |||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
15342 |
ctttccaccaactacactgtttatagtatgaagcatgtgcaaagatgaacattctgaccatcagaatgttccatttgttcttac-ttagaatgatttgta |
15244 |
T |
|
| Q |
188 |
agactt |
193 |
Q |
| |
|
|||||| |
|
|
| T |
15243 |
agactt |
15238 |
T |
|
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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 216508 - 216464
Alignment:
| Q |
148 |
tcagaatgttccatttgttcttactttaggatgatttgtaagactt |
193 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||||||||||||| |
|
|
| T |
216508 |
tcagaatgttccatttgtttttacat-aggatgatttgtaagactt |
216464 |
T |
|
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