View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6917_low_20 (Length: 324)
Name: NF6917_low_20
Description: NF6917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6917_low_20 |
 |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0032 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 22863026 - 22862710
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22863026 |
ttaaaatcaccaagaacacaccaagccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagaag |
22862927 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| || |
|
|
| T |
22862926 |
cataaatattcgccaaacagaacacctcattatttgttacaaaggagcctttaacaatcaaacaattatcaatatttactgacaaccagacatccaacac |
22862827 |
T |
 |
| Q |
201 |
agacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacacaaaaac |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22862826 |
agaaggatcccacaccgtaataatacctccagaagcaccgactgaagctttaaaggaataagccatcaaatcagccccccataaggagcgacacaaaaac |
22862727 |
T |
 |
| Q |
301 |
tcatccaccaccaccaa |
317 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
22862726 |
tcatccaccacctccaa |
22862710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 47556232 - 47556548
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47556232 |
ttaaagtcaccaagaacacaccacaccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
47556331 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||| || |
|
|
| T |
47556332 |
cataaatattcgccaaacagaacacctcattatttgctacaaaggagcctttaacaatcaaacaattagcaatatttactgacaaccagacatccaacac |
47556431 |
T |
 |
| Q |
201 |
agacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacacaaaaac |
300 |
Q |
| |
|
||| |||||||||| ||| ||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47556432 |
agaaggatcccacaacgtgataatacctccagaagcaccgactgaagctttaaaggaataagccatcaaatcagccccccataaggaacgacacaaaaac |
47556531 |
T |
 |
| Q |
301 |
tcatccaccaccaccaa |
317 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
47556532 |
tcatccaccacctccaa |
47556548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 591117 - 591307
Alignment:
| Q |
64 |
tcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaac |
163 |
Q |
| |
|
|||||||||| ||||||||||||| ||| | ||||||||||||| || |||||||| |||| ||||| ||| || ||| || || || | ||||| | |
|
|
| T |
591117 |
tcccacaacatctgtcgccccctaatattagaaggagcataaatgtttgccaaacaaaacatgtcattgttttttaaaaacgacccctttatcatcaagc |
591216 |
T |
 |
| Q |
164 |
aataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaa |
254 |
Q |
| |
|
||| |||||||||| | || ||||||||||| ||| ||||||||||||||||||||||| || || || || ||||||| |||||| |
|
|
| T |
591217 |
aatttgcaatatttacagtcatccaaacatccagcacactaggatcccacaccgtaataataccaccagacgcaccaactgaagatttaaa |
591307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 20695295 - 20695029
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||| |||||| ||| ||||||||| || ||||||||| | || ||||||||| | |||||||| | |
|
|
| T |
20695295 |
ttaaaatcaccaagaatacaccaagcagcttcatcatgtacctgaatcaaattagataacacatcccacaaatcttgccgccccctattgtcacaagggg |
20695196 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaac |
200 |
Q |
| |
|
|||| |||| |||||||| |||| ||| ||||| || || ||||||||||||||||||| | ||||||| || | || |||||||||||| || |
|
|
| T |
20695195 |
cataggtattagccaaacaaaacaattcactattttttaagaacctccctttaacaatcaaacaattaacaatattcaccgtcacccaaacatccaacac |
20695096 |
T |
 |
| Q |
201 |
agacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatc |
267 |
Q |
| |
|
| | |||||||| ||||||||||| || || || || ||||||| |||||| || |||||||| |
|
|
| T |
20695095 |
actagagtcccacactgtaataataccaccagacgcaccaactgaaggtttaaaagaaaaagccatc |
20695029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 20700773 - 20700507
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||| |||||| ||| ||||||||| || ||||||||| | || ||||||||| | |||||||| | |
|
|
| T |
20700773 |
ttaaaatcaccaagaatacaccaagcagcttcatcatgtacctgaatcaaattagataacacatcccacaaatcttgccgccccctattgtcacaagggg |
20700674 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaac |
200 |
Q |
| |
|
|||| |||| |||||||| |||| ||| ||||| || || ||||||||||||||||||| | ||||||| || | || |||||||||||| || |
|
|
| T |
20700673 |
cataggtattagccaaacaaaacaattcactattttttaagaacctccctttaacaatcaaacaattaacaatattcaccgtcacccaaacatccaacac |
20700574 |
T |
 |
| Q |
201 |
agacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatc |
267 |
Q |
| |
|
| | |||||||| ||||||||||| || || || || ||||||| |||||| || |||||||| |
|
|
| T |
20700573 |
actagagtcccacactgtaataataccaccagacgcaccaactgaaggtttaaaagaaaaagccatc |
20700507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 254
Target Start/End: Original strand, 12124573 - 12124781
Alignment:
| Q |
46 |
aacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaagg |
145 |
Q |
| |
|
||||||||||| | || |||||||| | ||| ||||||||| ||| ||||||||||||||||| ||||||| |||| ||||||||| | ||| | |
|
|
| T |
12124573 |
aacaaattagagatagcttcccacaaaagctggcgccccctattattgcaaggagcataaatatttaccaaacaaaacatttcattatttttaataaacg |
12124672 |
T |
 |
| Q |
146 |
aacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacctcccgaagctccgactga |
245 |
Q |
| |
|
| || || | |||||||||| ||| ||||| | || |||||||||||| ||| |||||||||||||||||||| || || || || || ||||| |
|
|
| T |
12124673 |
accccttgatcatcaaacaatttgtaatgtttaccgtcatccaaacatccaacacactaggatcccacaccgtaataatgccaccagacgcaccaactga |
12124772 |
T |
 |
| Q |
246 |
agctttaaa |
254 |
Q |
| |
|
|| |||||| |
|
|
| T |
12124773 |
agatttaaa |
12124781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 10798960 - 10798644
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10798960 |
ttaaagtcaccaagaacacaccaagccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacttgtcgccccctactatcacaaggag |
10798861 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaac |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| || |
|
|
| T |
10798860 |
cataaatattcgccaaactgaacacctcattatttgctacaaaggagcctttaacaatcaaacaattatcaatatttactgacaaccagacatccaacac |
10798761 |
T |
 |
| Q |
201 |
agacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacacaaaaac |
300 |
Q |
| |
|
||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10798760 |
agaaggatcccacaccgtgataatacctccagaagcaccgactgaagctttaaaggaataagccatcaaatcagccccccataaggaacgacacaaaaac |
10798661 |
T |
 |
| Q |
301 |
tcatccaccaccaccaa |
317 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
10798660 |
tcatccaccacctccaa |
10798644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 5388804 - 5388488
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
5388804 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaatggaaacaaattagacaaagaatcccacaacacctgatgccccctactgtcacaaggag |
5388705 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaac |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||||||| || |
|
|
| T |
5388704 |
cataaacattcgccaaacagaacacctcattatttgcaacaaaagaacctttaacaatcaaacaattatcaatattaactgacaaccagacatccaacac |
5388605 |
T |
 |
| Q |
201 |
agacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacacaaaaac |
300 |
Q |
| |
|
||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
5388604 |
agaaggatcccacatcgtaataatacctcccgaagcaccgactgaagctttaaaggagtaagccatcaaatcgatcccccataaggaacgacacaaaaac |
5388505 |
T |
 |
| Q |
301 |
tcatccaccaccaccaa |
317 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
5388504 |
tcatccaccaccgccaa |
5388488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 2897316 - 2897373
Alignment:
| Q |
170 |
caatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacc |
227 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
2897316 |
caatatttaccgtcaaccaaacatccaaaacactaggatcccacacagtaataatacc |
2897373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 221996 - 221767
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
||||||||||||||||||||||| | ||||| |||||||| ||| |||||||| ||||| | ||||||| ||||| || || |||||||| ||||||| |
|
|
| T |
221996 |
ttaaaatcaccaagaacacaccacacagcttccccatgtaactgaatcaaattagtcaaagcaccccacaaaacctggcgaccactactatcgcaaggag |
221897 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaac |
200 |
Q |
| |
|
|||||||||| |||||||| ||||| |||||| || || || ||||| ||||| ||||||| | ||||||||||||| ||||| ||||||| || |
|
|
| T |
221896 |
cataaatatttgccaaacaaaacacttcattactttttatgaacttccctttcacaataaaacaattagcaatatttactgataaccagacatccaccac |
221797 |
T |
 |
| Q |
201 |
agacggatcccacaccgtaataatacctcc |
230 |
Q |
| |
|
| ||||||||||| || ||||||||||| |
|
|
| T |
221796 |
actaggatcccacacagtgataatacctcc |
221767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 50197 - 50126
Alignment:
| Q |
64 |
tcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattattt |
135 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
50197 |
tcccacagaacctgtcgccccctattatcacaaggagcataaatatttgccaaacaaaacacttcattattt |
50126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17824061 - 17823927
Alignment:
| Q |
1 |
ttaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggag |
100 |
Q |
| |
|
||||| |||||||| ||||||||||| | || || |||| ||||||||||||| | | ||||||||| ||||| || |||||| ||| |||||||| |
|
|
| T |
17824061 |
ttaaagtcaccaagcacacaccaagctacatcaccgtgtaccagaaacaaattagagaccgcatcccacaaaacctgacgtcccctattattacaaggag |
17823962 |
T |
 |
| Q |
101 |
cataaatattcgccaaacagaacacctcattattt |
135 |
Q |
| |
|
|||||||||| |||||||| |||| ||||||||| |
|
|
| T |
17823961 |
cataaatatttgccaaacaaaacatttcattattt |
17823927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 311
Target Start/End: Complemental strand, 15646353 - 15646136
Alignment:
| Q |
94 |
caaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacat |
193 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||||||| | ||| || || |||| |||||||||| || ||| || | ||||||||||| |
|
|
| T |
15646353 |
caaggagcataaatatttgccaaacaaaacacttcattatttttaataaacgaccccttaatcatcaaacaatgcgaaaaattaaccgtcaaccaaacat |
15646254 |
T |
 |
| Q |
194 |
ccaaaacagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgaca |
293 |
Q |
| |
|
||| ||| ||||||||||||||||| ||||| || ||||| || |||| ||||||||| || ||||||| ||||| |||||| | ||| |||| |
|
|
| T |
15646253 |
ccactacattaggatcccacaccgtaattataccaccagaagcaccaactgcagctttaaaagaaaaagccataggatcagacccccaaatagagcgaca |
15646154 |
T |
 |
| Q |
294 |
caaaaactcatccaccac |
311 |
Q |
| |
|
|| |||||||| ||||| |
|
|
| T |
15646153 |
cacgaactcatcaaccac |
15646136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 254
Target Start/End: Original strand, 23824553 - 23824763
Alignment:
| Q |
44 |
gaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaa |
143 |
Q |
| |
|
||||||||||||| | | ||||||||| ||||| || || ||| ||| |||||||||||| ||||| |||||||| ||||| |||||||| || ||| |
|
|
| T |
23824553 |
gaaacaaattagagaccgcatcccacaagacctgacgtcctctattattacaaggagcatatatatttgccaaacaaaacacttcattattatttaaaaa |
23824652 |
T |
 |
| Q |
144 |
ggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacctcccgaagctccgact |
243 |
Q |
| |
|
| ||||||| ||||| |||| ||| ||||| | || |||||||||||| ||| || |||||||| ||||||||||| || ||||| || ||| |
|
|
| T |
23824653 |
cgtccctttaatcatcaagcaatttgcaaagtttacagtcacccaaacatccaacacactagggtcccacacagtaataataccaccagaagcgccaact |
23824752 |
T |
 |
| Q |
244 |
gaagctttaaa |
254 |
Q |
| |
|
|||| |||||| |
|
|
| T |
23824753 |
gaagatttaaa |
23824763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 17151045 - 17150864
Alignment:
| Q |
46 |
aacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaagg |
145 |
Q |
| |
|
||||||||||| | || |||||||| ||| ||||||||| ||| ||||||||||||||||| ||||||| ||||| ||||||||| | ||| |
|
|
| T |
17151045 |
aacaaattagagacagcttcccacaaactctgacgccccctaatattgcaaggagcataaatatttaccaaacaaaacacttcattatttttaataaaca |
17150946 |
T |
 |
| Q |
146 |
aacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacc |
227 |
Q |
| |
|
| || || | |||||||||| |||| ||||| | ||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
17150945 |
accccttgatcatcaaacaatttgcaatgtttaccgtcaaccaaacatccaacacattaggatcccacaccgtaataatacc |
17150864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 3517690 - 3517850
Alignment:
| Q |
64 |
tcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaac |
163 |
Q |
| |
|
|||||||| | ||| ||||||||| ||| ||||||||||||||||| ||||||| |||| |||| |||| | ||| || || || | ||||||| |
|
|
| T |
3517690 |
tcccacaaaatctggcgccccctattattgcaaggagcataaatatttaccaaacaaaacatttcatgatttttaataaacgaccccttgattatcaaac |
3517789 |
T |
 |
| Q |
164 |
aataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataat |
224 |
Q |
| |
|
||| |||||||||| | ||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
3517790 |
aatttgcaatatttaccgtcaaccaaacatccaacacactaggatcccacaccgtaataat |
3517850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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