View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6917_low_26 (Length: 262)

Name: NF6917_low_26
Description: NF6917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6917_low_26
NF6917_low_26
[»] chr7 (30 HSPs)
chr7 (1-262)||(30262092-30262353)
chr7 (1-262)||(15441527-15441788)
chr7 (1-262)||(11516266-11516527)
chr7 (59-262)||(7293113-7293316)
chr7 (93-262)||(25292301-25292470)
chr7 (94-252)||(47481003-47481162)
chr7 (128-252)||(13321182-13321307)
chr7 (93-225)||(16211897-16212029)
chr7 (93-219)||(18253841-18253967)
chr7 (93-226)||(11580738-11580871)
chr7 (93-226)||(13037013-13037146)
chr7 (93-226)||(36052795-36052928)
chr7 (183-262)||(14423602-14423681)
chr7 (183-262)||(14113952-14114031)
chr7 (97-225)||(3060101-3060229)
chr7 (93-207)||(16478968-16479082)
chr7 (93-209)||(13572808-13572924)
chr7 (93-213)||(10989541-10989661)
chr7 (94-219)||(2437590-2437715)
chr7 (101-213)||(13911024-13911136)
chr7 (1-72)||(7292887-7292958)
chr7 (97-226)||(295965-296094)
chr7 (129-219)||(48622664-48622754)
chr7 (129-209)||(16914928-16915009)
chr7 (128-219)||(15950789-15950880)
chr7 (128-219)||(18980019-18980110)
chr7 (129-209)||(9611474-9611555)
chr7 (129-209)||(9839045-9839126)
chr7 (11-86)||(13351999-13352075)
chr7 (129-208)||(13377695-13377775)
[»] chr8 (30 HSPs)
chr8 (1-262)||(5238126-5238387)
chr8 (1-262)||(24661211-24661472)
chr8 (1-262)||(43685585-43685846)
chr8 (59-262)||(22907177-22907380)
chr8 (93-225)||(16193716-16193848)
chr8 (93-252)||(17345700-17345860)
chr8 (93-226)||(43373467-43373600)
chr8 (93-225)||(24928791-24928923)
chr8 (129-225)||(16404975-16405071)
chr8 (93-213)||(6774258-6774378)
chr8 (93-209)||(21844576-21844692)
chr8 (93-213)||(24549113-24549233)
chr8 (93-209)||(21851969-21852085)
chr8 (1-72)||(22907535-22907606)
chr8 (93-213)||(30120854-30120974)
chr8 (93-213)||(16674392-16674512)
chr8 (198-252)||(18612643-18612697)
chr8 (198-252)||(22147675-22147729)
chr8 (11-76)||(22321589-22321654)
chr8 (129-209)||(26011660-26011741)
chr8 (128-219)||(16195398-16195489)
chr8 (128-219)||(22006256-22006347)
chr8 (155-209)||(23226076-23226131)
chr8 (17-86)||(22981244-22981314)
chr8 (168-209)||(23149985-23150026)
chr8 (78-150)||(222754-222826)
chr8 (78-150)||(736377-736449)
chr8 (78-150)||(860272-860344)
chr8 (129-208)||(17285370-17285450)
chr8 (11-86)||(23217924-23218000)
[»] chr5 (28 HSPs)
chr5 (1-262)||(20623008-20623269)
chr5 (1-262)||(21233491-21233752)
chr5 (1-262)||(16536236-16536497)
chr5 (1-262)||(37052783-37053044)
chr5 (1-262)||(25900369-25900629)
chr5 (93-225)||(23507096-23507228)
chr5 (93-252)||(34939408-34939568)
chr5 (94-224)||(18531068-18531198)
chr5 (93-224)||(22053834-22053965)
chr5 (93-226)||(27182546-27182679)
chr5 (93-213)||(29188284-29188404)
chr5 (95-209)||(27009975-27010089)
chr5 (128-252)||(32950861-32950985)
chr5 (78-213)||(22366481-22366616)
chr5 (93-210)||(43443398-43443515)
chr5 (78-210)||(18777995-18778127)
chr5 (93-213)||(19500031-19500151)
chr5 (93-213)||(25426760-25426880)
chr5 (78-213)||(4199985-4200120)
chr5 (93-213)||(12506-12626)
chr5 (93-213)||(21073595-21073715)
chr5 (198-252)||(17909742-17909796)
chr5 (129-209)||(21310709-21310790)
chr5 (129-209)||(29918131-29918212)
chr5 (128-219)||(10777968-10778059)
chr5 (128-219)||(23514728-23514819)
chr5 (129-209)||(19862375-19862456)
chr5 (168-209)||(23981516-23981557)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-262)||(26834-27095)
scaffold0141 (1-262)||(22579-22840)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-262)||(1545-1806)
[»] chr3 (33 HSPs)
chr3 (1-262)||(2449201-2449462)
chr3 (59-262)||(17912446-17912648)
chr3 (59-225)||(16744115-16744281)
chr3 (93-262)||(13975685-13975853)
chr3 (93-262)||(45860937-45861105)
chr3 (78-262)||(13954853-13955036)
chr3 (93-225)||(51158018-51158150)
chr3 (93-226)||(15859023-15859156)
chr3 (93-225)||(14842561-14842693)
chr3 (93-225)||(12030147-12030279)
chr3 (93-219)||(15936633-15936759)
chr3 (93-225)||(2049941-2050073)
chr3 (93-221)||(13839025-13839153)
chr3 (93-219)||(15938475-15938601)
chr3 (128-252)||(11986139-11986263)
chr3 (93-213)||(55316351-55316471)
chr3 (78-191)||(16821256-16821369)
chr3 (93-213)||(41270207-41270327)
chr3 (1-72)||(16744436-16744507)
chr3 (163-226)||(19231982-19232045)
chr3 (101-181)||(15614973-15615053)
chr3 (155-209)||(14080701-14080756)
chr3 (129-221)||(54651625-54651717)
chr3 (179-225)||(19260823-19260869)
chr3 (11-86)||(18969968-18970044)
chr3 (128-219)||(12264790-12264881)
chr3 (128-219)||(15468338-15468429)
chr3 (128-219)||(25058906-25058997)
chr3 (128-219)||(49232603-49232694)
chr3 (128-221)||(12902086-12902179)
chr3 (129-209)||(4145814-4145894)
chr3 (21-100)||(14177148-14177228)
chr3 (129-208)||(47784767-47784847)
[»] chr2 (19 HSPs)
chr2 (1-262)||(14906403-14906664)
chr2 (1-262)||(23820110-23820371)
chr2 (26-262)||(19689364-19689600)
chr2 (1-262)||(20015050-20015311)
chr2 (93-262)||(17396616-17396784)
chr2 (54-252)||(25265362-25265562)
chr2 (59-226)||(36982440-36982608)
chr2 (94-225)||(462870-463001)
chr2 (93-226)||(19794703-19794836)
chr2 (93-225)||(20627313-20627445)
chr2 (93-226)||(8891373-8891506)
chr2 (93-224)||(24341390-24341521)
chr2 (129-224)||(43642958-43643053)
chr2 (94-252)||(7507816-7507975)
chr2 (93-213)||(19886661-19886781)
chr2 (128-219)||(12728559-12728650)
chr2 (128-219)||(34824642-34824733)
chr2 (129-209)||(24884852-24884933)
chr2 (129-208)||(68158-68238)
[»] chr1 (16 HSPs)
chr1 (1-262)||(51452531-51452792)
chr1 (78-225)||(20931461-20931608)
chr1 (93-223)||(20913161-20913291)
chr1 (93-225)||(41394353-41394485)
chr1 (129-226)||(20445846-20445943)
chr1 (93-226)||(20893625-20893758)
chr1 (129-226)||(37844449-37844546)
chr1 (129-226)||(20531611-20531708)
chr1 (93-213)||(2116386-2116506)
chr1 (93-213)||(45051554-45051674)
chr1 (94-219)||(22227941-22228066)
chr1 (94-219)||(22232638-22232763)
chr1 (93-213)||(5072388-5072508)
chr1 (93-213)||(18601118-18601238)
chr1 (198-252)||(20254550-20254604)
chr1 (168-209)||(22143361-22143402)
[»] chr4 (23 HSPs)
chr4 (1-262)||(10488601-10488862)
chr4 (16-262)||(16327889-16328135)
chr4 (59-262)||(26680297-26680500)
chr4 (78-262)||(13048184-13048368)
chr4 (93-225)||(122020-122152)
chr4 (93-224)||(15675090-15675221)
chr4 (93-224)||(10104251-10104382)
chr4 (129-226)||(54118243-54118340)
chr4 (93-226)||(13246561-13246694)
chr4 (97-198)||(31115764-31115865)
chr4 (152-224)||(33240890-33240962)
chr4 (78-209)||(10644336-10644467)
chr4 (1-72)||(26680071-26680142)
chr4 (78-213)||(47357771-47357906)
chr4 (129-209)||(40885570-40885650)
chr4 (198-252)||(19697337-19697391)
chr4 (198-252)||(19707922-19707976)
chr4 (93-226)||(7850131-7850264)
chr4 (128-219)||(18169137-18169228)
chr4 (11-78)||(19559410-19559477)
chr4 (193-224)||(31132545-31132576)
chr4 (168-208)||(13809511-13809551)
chr4 (129-208)||(15044994-15045074)
[»] scaffold0078 (2 HSPs)
scaffold0078 (63-262)||(37029-37228)
scaffold0078 (17-68)||(37391-37442)
[»] scaffold0772 (1 HSPs)
scaffold0772 (93-262)||(5660-5829)
[»] scaffold0132 (1 HSPs)
scaffold0132 (54-252)||(13597-13797)
[»] scaffold0266 (2 HSPs)
scaffold0266 (93-225)||(1255-1387)
scaffold0266 (93-222)||(3585-3714)
[»] scaffold0175 (1 HSPs)
scaffold0175 (78-225)||(956-1103)
[»] scaffold0049 (1 HSPs)
scaffold0049 (93-252)||(48318-48477)
[»] scaffold0195 (2 HSPs)
scaffold0195 (93-226)||(19337-19470)
scaffold0195 (93-225)||(21421-21553)
[»] scaffold0125 (1 HSPs)
scaffold0125 (54-252)||(41739-41939)
[»] chr6 (23 HSPs)
chr6 (54-252)||(35009411-35009611)
chr6 (93-252)||(1657720-1657880)
chr6 (93-252)||(15862602-15862762)
chr6 (93-226)||(23153578-23153711)
chr6 (94-225)||(14626118-14626249)
chr6 (93-213)||(1650105-1650225)
chr6 (142-251)||(27751605-27751715)
chr6 (78-213)||(25175680-25175815)
chr6 (78-213)||(27653983-27654118)
chr6 (128-225)||(29666040-29666137)
chr6 (88-213)||(16825752-16825879)
chr6 (198-252)||(19629567-19629621)
chr6 (18-86)||(15005038-15005107)
chr6 (129-209)||(18629608-18629689)
chr6 (11-86)||(15889838-15889914)
chr6 (17-100)||(25640673-25640757)
chr6 (129-209)||(29605616-29605696)
chr6 (128-219)||(1556172-1556263)
chr6 (128-219)||(16232059-16232150)
chr6 (155-209)||(16887792-16887847)
chr6 (136-207)||(17083200-17083271)
chr6 (155-209)||(35136013-35136068)
chr6 (168-209)||(33324898-33324939)
[»] scaffold0302 (1 HSPs)
scaffold0302 (78-225)||(12229-12376)
[»] scaffold0413 (1 HSPs)
scaffold0413 (93-225)||(6064-6196)
[»] scaffold0077 (1 HSPs)
scaffold0077 (78-226)||(36912-37060)
[»] scaffold0023 (2 HSPs)
scaffold0023 (93-225)||(48729-48861)
scaffold0023 (78-191)||(36210-36323)
[»] scaffold0162 (2 HSPs)
scaffold0162 (93-252)||(8152-8312)
scaffold0162 (95-226)||(26414-26545)
[»] scaffold0075 (1 HSPs)
scaffold0075 (129-252)||(34432-34556)
[»] scaffold0018 (1 HSPs)
scaffold0018 (93-225)||(51182-51314)
[»] scaffold0025 (2 HSPs)
scaffold0025 (93-224)||(8980-9111)
scaffold0025 (93-222)||(148852-148981)
[»] scaffold1542 (1 HSPs)
scaffold1542 (129-226)||(533-630)
[»] scaffold0011 (1 HSPs)
scaffold0011 (93-226)||(123163-123296)
[»] scaffold0218 (1 HSPs)
scaffold0218 (93-226)||(5060-5193)
[»] scaffold0028 (3 HSPs)
scaffold0028 (129-226)||(89453-89550)
scaffold0028 (174-226)||(107783-107835)
scaffold0028 (155-209)||(79731-79786)
[»] scaffold0106 (1 HSPs)
scaffold0106 (93-225)||(41860-41992)
[»] scaffold0008 (2 HSPs)
scaffold0008 (129-225)||(128169-128265)
scaffold0008 (101-191)||(31697-31787)
[»] scaffold0001 (3 HSPs)
scaffold0001 (78-225)||(172021-172168)
scaffold0001 (78-225)||(177724-177871)
scaffold0001 (198-252)||(164930-164984)
[»] scaffold0026 (3 HSPs)
scaffold0026 (93-219)||(107878-108004)
scaffold0026 (93-209)||(64527-64648)
scaffold0026 (168-210)||(89863-89905)
[»] scaffold0012 (1 HSPs)
scaffold0012 (93-226)||(247441-247574)
[»] scaffold0498 (1 HSPs)
scaffold0498 (93-225)||(9009-9141)
[»] scaffold0420 (1 HSPs)
scaffold0420 (93-213)||(13325-13445)
[»] scaffold0116 (1 HSPs)
scaffold0116 (93-209)||(167-283)
[»] scaffold0529 (1 HSPs)
scaffold0529 (93-219)||(3094-3220)
[»] scaffold0215 (2 HSPs)
scaffold0215 (93-191)||(9371-9469)
scaffold0215 (93-191)||(16269-16367)
[»] scaffold0076 (1 HSPs)
scaffold0076 (78-190)||(43114-43226)
[»] scaffold0361 (1 HSPs)
scaffold0361 (132-247)||(3360-3474)
[»] scaffold0009 (1 HSPs)
scaffold0009 (78-225)||(272141-272288)
[»] scaffold0022 (2 HSPs)
scaffold0022 (94-175)||(5254-5335)
scaffold0022 (168-208)||(102923-102963)
[»] scaffold1711 (1 HSPs)
scaffold1711 (93-213)||(1304-1424)
[»] scaffold0084 (1 HSPs)
scaffold0084 (128-252)||(56072-56196)
[»] scaffold0139 (2 HSPs)
scaffold0139 (93-191)||(14083-14181)
scaffold0139 (96-219)||(21110-21233)
[»] scaffold0369 (1 HSPs)
scaffold0369 (94-175)||(3854-3936)
[»] scaffold0467 (1 HSPs)
scaffold0467 (128-221)||(10335-10428)
[»] scaffold0123 (1 HSPs)
scaffold0123 (129-209)||(8176-8257)
[»] scaffold0066 (2 HSPs)
scaffold0066 (128-175)||(45197-45244)
scaffold0066 (128-175)||(54583-54630)
[»] scaffold0058 (1 HSPs)
scaffold0058 (156-209)||(70307-70361)
[»] scaffold0456 (2 HSPs)
scaffold0456 (168-209)||(1546-1587)
scaffold0456 (168-209)||(8691-8732)
[»] scaffold0483 (1 HSPs)
scaffold0483 (11-78)||(1022-1089)
[»] scaffold0409 (2 HSPs)
scaffold0409 (131-209)||(1348-1427)
scaffold0409 (131-209)||(9603-9682)
[»] scaffold0109 (1 HSPs)
scaffold0109 (11-78)||(45809-45876)
[»] scaffold0389 (1 HSPs)
scaffold0389 (155-208)||(10854-10908)
[»] scaffold0151 (1 HSPs)
scaffold0151 (156-209)||(22422-22476)
[»] scaffold0700 (1 HSPs)
scaffold0700 (129-209)||(2691-2772)
[»] scaffold0387 (1 HSPs)
scaffold0387 (198-251)||(7127-7180)
[»] scaffold0138 (1 HSPs)
scaffold0138 (129-209)||(22429-22510)
[»] scaffold0032 (2 HSPs)
scaffold0032 (168-209)||(93773-93814)
scaffold0032 (142-209)||(104623-104691)
[»] scaffold0243 (1 HSPs)
scaffold0243 (129-208)||(2317-2397)
[»] scaffold0021 (1 HSPs)
scaffold0021 (22-78)||(22199-22255)


Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 30262353 - 30262092
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30262353 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 30262254  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262253 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 30262154  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262153 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 30262092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 15441788 - 15441527
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15441788 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 15441689  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441688 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 15441589  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15441588 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 15441527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 11516266 - 11516527
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11516266 atgagatcaacatcaacaatcaaccacaatcataacatatactcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 11516365  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516366 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 11516465  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11516466 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 11516527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 59 - 262
Target Start/End: Original strand, 7293113 - 7293316
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7293113 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 7293212  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 258  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293213 tattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 7293312  T
Q  259 aaaa 262  Q
    ||||    
T  7293313 aaaa 7293316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 25292470 - 25292301
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||| ||| || |||| ||||||| ||||||||||||| ||||||||||||||||| || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcttgaaaa 25292301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 47481162 - 47481003
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  47481162 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 47481063  T
Q  194 gttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaa 252  Q
    ||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  47481062 gttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaa 47481003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 13321182 - 13321307
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |     
T  13321182 aaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccactt 13321281  T
Q  228 attcatttcaacccat-ttcatacaa 252  Q
    ||||| |||||||||| |||||||||    
T  13321282 attcaattcaacccatattcatacaa 13321307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 16211897 - 16212029
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||| ||||| || ||||||| ||||||||| |||||||||||||||||||||||||||||     
T  16211897 gcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 16211996  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||||||||||||||||||| |||||    
T  16211997 agttggagcacgaatttagcaacaattgtccat 16212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 18253967 - 18253841
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  18253967 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 18253868  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||||||||| |||||||    
T  18253867 agttggagcacgaatttagtaacaatt 18253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 11580871 - 11580738
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  11580871 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 11580772  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||||||||||||| |||||||||||    
T  11580771 agttggagcacgaatttagcaataattatccatt 11580738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 13037146 - 13037013
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||     
T  13037146 gcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13037047  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  13037046 agttggagcacgaatttagcaacaattatccatt 13037013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 36052795 - 36052928
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||     
T  36052795 gcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 36052894  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||| |  ||||||||||||||||||||||    
T  36052895 agttggagtataaatttagcaacaattatccatt 36052928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 14423681 - 14423602
Alignment:
Q  183 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 14423602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 14114031 - 14113952
Alignment:
Q  183 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 14113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 3060101 - 3060229
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||||| || || ||||||| |||||||  |||||||||||| ||||||| |  ||||||||| ||||||| ||||||||||| |||| |||| ||||    
T  3060101 aattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagtt 3060200  T
Q  197 ggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||    
T  3060201 ggagcacgaatttagcaacaattatccat 3060229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 16479082 - 16478968
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||      
T  16479082 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgc 16478983  T
Q  193 agttggagcacgaat 207  Q
    |||  ||||||||||    
T  16478982 agtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 2437590 - 2437715
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    |||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  194 gttggagcacgaatttagcaacaatt 219  Q
        ||||||||||||||||| ||||    
T  2437690 acaagagcacgaatttagcaagaatt 2437715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  201 cacgaatttagca 213  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7292887 - 7292958
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaac 72  Q
    |||||||  |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  7292887 atgagatcaacatcaacaatcaaccacaatcacaacatataatcatacactccatcataattcaacaacaac 7292958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 296094 - 295965
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||| ||||||| ||||||| ||||| |  |||||| ||||| |||||||||||||  ||||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  197 ggagcacgaatttagcaacaattatccatt 226  Q
     || ||||||||||||||||||||| ||||    
T  295994 agaacacgaatttagcaacaattattcatt 295965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 48622754 - 48622664
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    |||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| |||  |||||||||||||||| |||||    
T  48622754 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaatt 48622664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 16915009 - 16914928
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  16915009 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 15950880 - 15950789
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  15950880 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 15950789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 18980110 - 18980019
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  18980110 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 18980019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 9611474 - 9611555
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  9611474 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9611555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 9839045 - 9839126
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  9839045 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 9839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 13351999 - 13352075
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatc 86  Q
    ||||| ||||| ||||||| || ||| ||||||||| || || |||  |||||||||||||||||||| ||||||||    
T  13351999 catcaacaatctaccacaaccacaacttataatcatgcattccatcccaattcaacaacaacatgtcataattcatc 13352075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 13377695 - 13377775
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  13377695 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 13377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 5238126 - 5238387
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5238126 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 5238225  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238226 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 5238325  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5238326 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 5238387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 24661472 - 24661211
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24661472 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 24661373  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661372 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 24661273  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24661272 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 24661211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 43685585 - 43685846
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43685585 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 43685684  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685685 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 43685784  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43685785 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 43685846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 59 - 262
Target Start/End: Complemental strand, 22907380 - 22907177
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22907380 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 22907281  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907280 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 22907181  T
Q  259 aaaa 262  Q
    ||||    
T  22907180 aaaa 22907177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 16193848 - 16193716
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  16193848 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcat 16193749  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  16193748 agttggagcacgaatttagcaacaatcatccat 16193716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 252
Target Start/End: Original strand, 17345700 - 17345860
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||     
T  17345700 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcac 17345799  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaa 252  Q
    |||| |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  17345800 agttagagcacgaatttcgcaacaattatccatttattcaattcaacccatattcatacaa 17345860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 43373600 - 43373467
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||     
T  43373600 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 43373501  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||||||||||||  |||||||||||    
T  43373500 agttggagcacgaatttagcattaattatccatt 43373467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 24928923 - 24928791
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  24928923 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcac 24928824  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  24928823 agttggagcacgaatttagcaacaattatccat 24928791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 16405071 - 16404975
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  16405071 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccat 16404975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 6774378 - 6774258
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  6774378 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 6774279  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  6774278 agtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 24549113 - 24549233
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  24549113 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 24549212  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  24549213 agtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22907606 - 22907535
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaac 72  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22907606 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 22907535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 18612643 - 18612697
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  18612643 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 18612697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 22147675 - 22147729
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  22147675 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 22147729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 22321654 - 22321589
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgt 76  Q
    ||||| |||||||||||||||| ||||||||||||| || || |||| |||| ||||| |||||||    
T  22321654 catcaacaatcaaccacaatcacaacatataatcatgcattccatcacaatttaacaataacatgt 22321589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 26011660 - 26011741
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  26011660 aacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 26011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 16195398 - 16195489
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  |||||| ||||| ||   ||| ||||||||||||||||||    
T  16195398 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaatt 16195489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 22006347 - 22006256
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  22006347 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 22006256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 23226131 - 23226076
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| |||||| |||||    
T  23226131 caattatcatcaatttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 22981244 - 22981314
Alignment:
Q  17 caatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatc 86  Q
    |||||||||||||  | ||| ||||||||| || || |||| |||||||||||||||||||| ||||||||    
T  22981244 caatcaaccacaacaacaacttataatcatgcattccatcaaaattcaacaacaacatgtcacaattcatc 22981314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 222826 - 222754
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 150  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||    
T  222826 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 736449 - 736377
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 150  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||    
T  736449 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 860344 - 860272
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 150  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||    
T  860344 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 17285370 - 17285450
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| |||||||||  ||||||||||||| | ||||||||||||||    
T  17285370 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataattggagcacgaatt 17285450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 23217924 - 23218000
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatc 86  Q
    ||||| |||||||||||||  | ||| ||||||||| || || |||| | |||||||||||||||||| ||||||||    
T  23217924 catcaacaatcaaccacaactacaacttataatcatgcattccatcacatttcaacaacaacatgtcataattcatc 23218000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 20623008 - 20623269
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20623008 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 20623107  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623108 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 20623207  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20623208 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 20623269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 21233752 - 21233491
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21233752 atgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 21233653  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233652 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 21233553  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21233552 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 21233491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 16536236 - 16536497
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16536236 atgagatcaacatcatcaatcaactacaatcataacatacaatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 16536335  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16536336 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagttggag 16536435  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16536436 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 16536497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 37052783 - 37053044
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  37052783 atgagatcaacatcatcaatcaaccacaatcataacatataatcataccctccatcataactcaacaacaacatgtcaaattcatccattttgcacaatt 37052882  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37052883 ttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 37052982  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  37052983 cacgaatttagcaacaattatccattcattcatttcaacccatctcatccaaatcatgaaaa 37053044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 25900629 - 25900369
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25900629 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaa-ttcatccattttgcacaatt 25900531  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25900530 ttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagttggag 25900431  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  25900430 cacgaatttagcaacaattatccgttcattcatttcaacccatttcatccaaatcatgaaaa 25900369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 23507096 - 23507228
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  23507096 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23507195  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |  ||||||||||||||||||||||||||||||    
T  23507196 aaatggagcacgaatttagcaacaattatccat 23507228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 252
Target Start/End: Original strand, 34939408 - 34939568
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  34939408 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 34939507  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaa 252  Q
    |||| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||    
T  34939508 agttagagcacgaatttagcaacagttatccatttattcaattcaacccatattcatacaa 34939568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 18531198 - 18531068
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  18531198 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaca 18531099  T
Q  194 gttggagcacgaatttagcaacaattatcca 224  Q
    |||||||||||||||||||||||||||||||    
T  18531098 gttggagcacgaatttagcaacaattatcca 18531068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 22053965 - 22053834
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||||     
T  22053965 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcac 22053866  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||||||||||||||||||||||||||||||    
T  22053865 agttggagcacgaatttagcaacaattatcca 22053834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 27182679 - 27182546
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||     
T  27182679 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcac 27182580  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||| |||||||||||||||||||||||    
T  27182579 agttggagcatgaatttagcaacaattatccatt 27182546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  95 acaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 194  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  195 ttggagcacgaattt 209  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 32950861 - 32950985
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| | | |||||||||||||||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattc 32950960  T
Q  228 attcatttcaacccatttcatacaa 252  Q
    ||||   ||||||||||||||||||    
T  32950961 attccaatcaacccatttcatacaa 32950985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 22366616 - 22366481
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  22366616 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 22366517  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  22366516 caaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  193 agttggagcacgaattta 210  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 210
Target Start/End: Complemental strand, 18778127 - 18777995
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  18778127 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 18778028  T
Q  178 caaacatatcatcaaagttggagcacgaattta 210  Q
    |||||||| ||||| ||   |||||||||||||    
T  18778027 caaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 25426760 - 25426880
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  25426760 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 25426859  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  25426860 agcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 4200120 - 4199985
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||| ||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  |||||||||||||||    
T  4200120 aaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 4200021  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| |    ||||||||||||||||    
T  4200020 caaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 12506 - 12626
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||| |||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  12506 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 12605  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  12606 agcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 21073715 - 21073595
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||| ||||||||||||||||||| |||||     
T  21073715 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcac 21073616  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  21073615 agcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 17909742 - 17909796
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  17909742 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 17909796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 21310790 - 21310709
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  21310790 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 29918131 - 29918212
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| |||| || |||||||||||||| | |||||||||||||||    
T  29918131 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 10778059 - 10777968
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  10778059 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 10777968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 23514728 - 23514819
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  23514728 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 23514819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 19862375 - 19862456
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||||||||| | || ||||||||||||    
T  19862375 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaattt 19862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 238; Significance: 1e-132; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 26834 - 27095
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26834 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 26933  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26934 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 27033  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27034 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 27095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 22579 - 22840
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22579 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 22678  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22679 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 22778  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  22779 cacgaatttagcaacaattattcattcattcatttcaacccatttcatccaaatcatgaaaa 22840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 1806 - 1545
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1806 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 1707  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1706 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 1607  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1606 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 2449462 - 2449201
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2449462 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 2449363  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449362 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 2449263  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2449262 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 2449201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 59 - 262
Target Start/End: Complemental strand, 17912648 - 17912446
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  17912648 aattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaat 17912549  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 258  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17912548 tatcatcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaataatg 17912450  T
Q  259 aaaa 262  Q
    ||||    
T  17912449 aaaa 17912446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 16744281 - 16744115
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |    
T  16744281 aattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacact 16744182  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  16744181 tattatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccat 16744115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 13975853 - 13975685
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| ||||||||||||  ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  13975754 agttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaa 13975685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 45860937 - 45861105
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| ||||||||||||  ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  45861036 agttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaa 45861105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 78 - 262
Target Start/End: Complemental strand, 13955036 - 13954853
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||||| |||  ||||||| |||||||||  ||||||| || |||| ||||||||||||  ||||||||||||||||| || | |||||||||||||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  13954936 caa-catatcatcaaagttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaa 13954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 51158150 - 51158018
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  51158150 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 51158051  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  51158050 agttggagcacgaatttagcaacaattatccat 51158018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 15859156 - 15859023
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   ||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  15859156 gcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15859057  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  15859056 agttggagcacgaatttagcaacaattatccatt 15859023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 14842693 - 14842561
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||||||||| ||||||| ||| |||  |||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||     
T  14842693 gcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcac 14842594  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  14842593 agttggagcacgaatttagcaacaattatccat 14842561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 12030279 - 12030147
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||| ||||| ||||| ||| ||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  12030279 gcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 12030180  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  12030179 agttggagcacgaatttagcaacaattatccat 12030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 15936759 - 15936633
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  15936759 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 15936660  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||||||||| |||||||    
T  15936659 agttggagcacgaatttagtaacaatt 15936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 2049941 - 2050073
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || |||| || |||||||  |||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||     
T  2049941 gcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcac 2050040  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  2050041 agttggagcacgaatttagcaacaattatccat 2050073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 13839025 - 13839153
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||     
T  13839025 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13839124  T
Q  193 agttggagcacgaatttagcaacaattat 221  Q
    |||||||||||||||||||||||||||||    
T  13839125 agttggagcacgaatttagcaacaattat 13839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 15938601 - 15938475
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||| |     
T  15938601 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattac 15938502  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    |||||||||||| |||||| |||||||    
T  15938501 agttggagcacgtatttagtaacaatt 15938475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 11986263 - 11986139
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| | | |||||||||||||||| || || ||||||| || || ||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattc 11986164  T
Q  228 attcatttcaacccatttcatacaa 252  Q
    ||||   ||||||||||||||||||    
T  11986163 attccaatcaacccatttcatacaa 11986139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 16821256 - 16821369
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||  ||||| |||  |||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  16821256 aaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcata 16821355  T
Q  178 caaacatatcatca 191  Q
    |||||||| |||||    
T  16821356 caaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||  |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16744507 - 16744436
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaac 72  Q
    |||||||  |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16744507 atgagatcaacatcaactatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 16744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 19231982 - 19232045
Alignment:
Q  163 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccatt 19232045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 15614973 - 15615053
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaa 181  Q
    |||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 14080701 - 14080756
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  14080701 caattatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 54651625 - 54651717
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 221  Q
    |||||| ||||| ||  |||||||||||||||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||||    
T  54651625 aacatgcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattat 54651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 19260869 - 19260823
Alignment:
Q  179 aaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||||| | || ||||||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccat 19260823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 18969968 - 18970044
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatc 86  Q
    ||||| ||||||||||||| || ||| ||||||||| |  || |||| |||||||||||||||||||| ||||||||    
T  18969968 catcaacaatcaaccacaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattcatc 18970044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 12264881 - 12264790
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  12264881 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 12264790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 15468429 - 15468338
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  15468429 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaatt 15468338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 25058906 - 25058997
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  25058906 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 25058997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 49232603 - 49232694
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  49232603 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 49232694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 12902179 - 12902086
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 221  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| ||||||    
T  12902179 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattat 12902086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 4145894 - 4145814
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| | ||||||  || ||||||| | ||||||||| || ||||||||||| || | |||||| ||||||||    
T  4145894 aacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatcaccataattggagtacgaattt 4145814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 14177228 - 14177148
Alignment:
Q  21 caaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatccattttgcacaatt 100  Q
    ||||||||| || ||| ||||||||| || || |||| |||||||| ||||||||||| |||||||| |||  ||||||||    
T  14177228 caaccacaaccacaacttataatcatgcattccatcacaattcaaccacaacatgtcataattcatcaattgagcacaatt 14177148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 47784847 - 47784767
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||||||||| | || |||||||||||    
T  47784847 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattagagcacgaatt 47784767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 14906664 - 14906403
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14906664 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 14906565  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906564 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 14906465  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14906464 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 14906403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 23820110 - 23820371
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23820110 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 23820209  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820210 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 23820309  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23820310 cacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaa 23820371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 26 - 262
Target Start/End: Complemental strand, 19689600 - 19689364
Alignment:
Q  26 acaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatat 125  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689600 acaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatat 19689501  T
Q  126 tcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689500 ttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T
Q  226 tcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||    
T  19689400 tcattcatttcaacccatttcatacaaatcatgaaaa 19689364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 20015050 - 20015311
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20015050 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 20015149  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20015150 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagttggag 20015249  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  20015250 cacgaatttagcaacaattatccattcattcatttcaaccaatttcatctaaatcatgaaaa 20015311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 17396784 - 17396616
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| ||||||||||||| ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 17396686  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17396685 agttggagcacgaatttagcaacaattatccattcattcatgtcaacccatttcatacaaatcatgaaaa 17396616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 25265562 - 25265362
Alignment:
Q  54 atcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca 152  Q
    |||||||||||||||||||||  |||| |||| | |||  |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||    
T  25265562 atcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatca 25265463  T
Q  153 tacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcataca 251  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  25265462 tacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcataca 25265363  T
Q  252 a 252  Q
    |    
T  25265362 a 25265362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 36982608 - 36982440
Alignment:
Q  59 aattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaa 157  Q
    |||||||||||||| || |||| |||| | |||  |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||| ||||| |||||    
T  36982608 aattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaa 36982509  T
Q  158 ttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36982508 ttatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccatt 36982440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 94 - 225
Target Start/End: Original strand, 462870 - 463001
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |    
T  462870 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcaca 462969  T
Q  194 gttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||||||||||||||||||||||||    
T  462970 gttggagcacgaatttagcaacaattatccat 463001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 19794836 - 19794703
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19794836 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcac 19794737  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||||||||| | |||||||||||||    
T  19794736 agttggagcacgaatttaacgacaattatccatt 19794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 20627445 - 20627313
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || ||||||| |||||||   ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  20627445 gcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcac 20627346  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||| ||||||||||||||    
T  20627345 agttggagcacgaatttaacaacaattatccat 20627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 8891373 - 8891506
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  8891373 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 8891472  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  8891473 agttggagcacgaatttagcaacaattatccatt 8891506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 24341521 - 24341390
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  24341521 gcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 24341422  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||| |||| |||||||||||||||||||||    
T  24341421 agttgaagcatgaatttagcaacaattatcca 24341390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 43643053 - 43642958
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcca 224  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  43643053 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatcca 43642958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 7507975 - 7507816
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| | ||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcaca 7507876  T
Q  194 gttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaa 252  Q
        ||||||||||||||||| |||||| |||||||||| |||||||||| |||||||||    
T  7507875 acaagagcacgaatttagcaataattattcattcattcaattcaacccatattcatacaa 7507816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 19886781 - 19886661
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||| |||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19886781 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19886682  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  19886681 agcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 12728559 - 12728650
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  12728559 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 12728650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 34824642 - 34824733
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  34824642 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 34824733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 24884852 - 24884933
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | |||||| |||||| |||||||||||||| |||| |||||| |||||    
T  24884852 aacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatatcatcatagttagagcacaaattt 24884933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 68158 - 68238
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  68158 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 68238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 51452531 - 51452792
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51452531 atgagatcaacatcatcaatcaactacaatcataacatataatcatacactccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 51452630  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  51452631 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgaag 51452730  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51452731 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 51452792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 20931461 - 20931608
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||||||||| ||||||| ||||||   |||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20931461 aaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 20931560  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  20931561 caaacatatcatcacagttggagcacgaatttagcaacaattatccat 20931608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 20913161 - 20913291
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||||||||| ||||||| ||||||   |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  20913161 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20913260  T
Q  193 agttggagcacgaatttagcaacaattatcc 223  Q
    |||||||||||||||||||||||||||||||    
T  20913261 agttggagcacgaatttagcaacaattatcc 20913291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 41394353 - 41394485
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  ||||||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||     
T  41394353 gcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcat 41394452  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  41394453 agttggagcacgaatttagcaacaatcatccat 41394485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 20445846 - 20445943
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatt 20445943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 20893758 - 20893625
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||     
T  20893758 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 20893659  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||| |||||||||||||||||||||||    
T  20893658 agttggagcaagaatttagcaacaattatccatt 20893625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 37844546 - 37844449
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccatt 37844449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 20531611 - 20531708
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccatt 20531708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 2116386 - 2116506
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  2116386 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 2116485  T
Q  193 agttggagcacgaatttagca 213  Q
    |||   ||||||||| |||||    
T  2116486 agtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 45051554 - 45051674
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  || ||||||| |||||    
T  45051654 agtaagaacacgaatctagca 45051674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 22227941 - 22228066
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22228040  T
Q  194 gttggagcacgaatttagcaacaatt 219  Q
    |   ||||||||||||||||| ||||    
T  22228041 gcaagagcacgaatttagcaagaatt 22228066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 22232638 - 22232763
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22232737  T
Q  194 gttggagcacgaatttagcaacaatt 219  Q
    |   ||||||||||||||||| ||||    
T  22232738 gcaagagcacgaatttagcaagaatt 22232763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 20254550 - 20254604
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||| ||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  20254550 gagcacggatttaacaacaattatcaattcattccaatcaacccatttcatacaa 20254604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 10488601 - 10488862
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 100  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10488601 atgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaatt 10488700  T
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488701 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 10488800  T
Q  201 cacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  10488801 cacgaatttagcaacaattatccattcattcatttcaactcatttcatccaaatcatgaaaa 10488862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 16328135 - 16327889
Alignment:
Q  16 tcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcat 115  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16328135 tcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcat 16328036  T
Q  116 tttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16328035 tttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaac 16327936  T
Q  216 aattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  16327935 aattatccattcattcatttcaacccatttcatccaaatcatgaaaa 16327889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 59 - 262
Target Start/End: Original strand, 26680297 - 26680500
Alignment:
Q  59 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 158  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  26680297 aattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 26680396  T
Q  159 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatg 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26680397 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccattccatacaaatcatg 26680496  T
Q  259 aaaa 262  Q
    ||||    
T  26680497 aaaa 26680500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 78 - 262
Target Start/End: Complemental strand, 13048368 - 13048184
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||||| |||  ||||||| |||||||||| || |||| ||||||| ||||||||||||| ||||||||||||||||| || ||||| |||||||||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 13048184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 122020 - 122152
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||| |||||||||||||||||||||    
T  122120 agttggagcacaaatttagcaacaattatccat 122152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 15675221 - 15675090
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  15675221 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15675122  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||||||||||||||||||||||||||||||    
T  15675121 agttggagcacgaatttagcaacaattatcca 15675090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 10104382 - 10104251
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  10104382 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 10104283  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    |||||||||||| |||||||||||||||||||    
T  10104282 agttggagcacggatttagcaacaattatcca 10104251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 54118340 - 54118243
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  54118340 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatt 54118243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 13246561 - 13246694
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||     
T  13246561 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcac 13246660  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||| |||||||||||| |||||||||||||||    
T  13246661 agttgtagcacgaatttaacaacaattatccatt 13246694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 31115764 - 31115865
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  31115764 aattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagtt 31115863  T
Q  197 gg 198  Q
    ||    
T  31115864 gg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 33240890 - 33240962
Alignment:
Q  152 atacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcca 224  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatcca 33240962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 209
Target Start/End: Original strand, 10644336 - 10644467
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| || ||||||||||||||||| |||||||||||||||    
T  10644336 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcata 10644435  T
Q  178 caaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||| ||||| ||   ||||||||||||    
T  10644436 caaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26680071 - 26680142
Alignment:
Q  1 atgagatggacatcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaac 72  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26680071 atgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 26680142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 47357771 - 47357906
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||| ||||||||    
T  47357771 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcata 47357870  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  47357871 caaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 40885650 - 40885570
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| |||||||| ||| ||||||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885650 aacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 19697391 - 19697337
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  19697391 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 19697337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 19707976 - 19707922
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  19707976 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 19707922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 7850131 - 7850264
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||||||||| |   ||||  ||||  ||||||||||| ||| || | |||||| ||| ||| |||||||| ||||      
T  7850131 gcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaatacattcattcaaacataacatctc 7850230  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
      |||||||||||||||| || ||||||| ||||    
T  7850231 cattggagcacgaatttaacagcaattatgcatt 7850264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 18169137 - 18169228
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  18169137 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 18169228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 19559410 - 19559477
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca 78  Q
    ||||| ||||| ||||||| || ||| ||||||||| || || |||| ||||||||||||||||||||    
T  19559410 catcaacaatctaccacaaccacaacttataatcatgcattccatcacaattcaacaacaacatgtca 19559477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 224
Target Start/End: Original strand, 31132545 - 31132576
Alignment:
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    ||||||||||||||||||||||||||||||||    
T  31132545 agttggagcacgaatttagcaacaattatcca 31132576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 15044994 - 15045074
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  15044994 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 15045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 196; Significance: 1e-107; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 63 - 262
Target Start/End: Complemental strand, 37228 - 37029
Alignment:
Q  63 caacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 162  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37228 caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt 37129  T
Q  163 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 37029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 37442 - 37391
Alignment:
Q  17 caatcaaccacaatcataacatataatcatacactctatcataattcaacaa 68  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  37442 caatcaaccacaatcacaacatataatcatacactccatcataattcaacaa 37391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 5660 - 5829
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| ||||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaa 262  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaattattcattcattcgtttcaatccatttcatacaaatcatgaaaa 5829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 13597 - 13797
Alignment:
Q  54 atcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca 152  Q
    |||||||||||||||||||||  |||| |||||| |||  |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||    
T  13597 atcataattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatca 13696  T
Q  153 tacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcataca 251  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  13697 tacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcataca 13796  T
Q  252 a 252  Q
    |    
T  13797 a 13797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 1255 - 1387
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1255 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaa 1354  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  1355 agttggagcacgaatttagcaacaattatccat 1387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 3714 - 3585
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  3714 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 3615  T
Q  193 agttggagcacgaatttagcaacaattatc 222  Q
    ||||||||||||||||||||||||||||||    
T  3614 agttggagcacgaatttagcaacaattatc 3585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 1103 - 956
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||||| |||  |||||||||||| ||||| | ||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  1103 aaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 1004  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1003 caaacatatcatcacagttggagcacgaatttagcaacaattatccat 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 93 - 252
Target Start/End: Original strand, 48318 - 48477
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  48318 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 48417  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    |||||||||||||||||||||||||||||| ||||||||    |||||||||||||||||    
T  48418 agttggagcacgaatttagcaacaattatcaattcattccaaccaacccatttcatacaa 48477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 19337 - 19470
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  19337 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 19436  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  19437 agttggagcacgaatttagcaacaattatccatt 19470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 21421 - 21553
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  21421 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 21520  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  21521 agttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 41739 - 41939
Alignment:
Q  54 atcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca 152  Q
    |||||||||||||||||||||  |||| |||| | |||   ||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||    
T  41739 atcataattcaacaacaacatagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatca 41838  T
Q  153 tacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcataca 251  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||    
T  41839 tacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccatttattcaattcaacccatattcataca 41938  T
Q  252 a 252  Q
    |    
T  41939 a 41939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 9e-48; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 35009611 - 35009411
Alignment:
Q  54 atcataattcaacaacaacatgtcaaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca 152  Q
    |||||||||||||||||||||  |||| |||| | |||  |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||    
T  35009611 atcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatca 35009512  T
Q  153 tacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcataca 251  Q
    ||||||||| |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||  |||| |||||||||| ||||||||    
T  35009511 tacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccatttcttcaattcaacccatattcataca 35009412  T
Q  252 a 252  Q
    |    
T  35009411 a 35009411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 252
Target Start/End: Complemental strand, 1657880 - 1657720
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||| |||||     
T  1657880 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcac 1657781  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaa 252  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  1657780 agttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaa 1657720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 252
Target Start/End: Original strand, 15862602 - 15862762
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||  ||||| |  ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  15862602 gcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 15862701  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaa 252  Q
    |||| |||||||||||||| |||||||||||||| ||||| |||||||||| |||||||||    
T  15862702 agttagagcacgaatttagtaacaattatccatttattcaattcaacccatattcatacaa 15862762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 23153578 - 23153711
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  23153578 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23153677  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||| ||||||||||||||    
T  23153678 agttggagcacgaatttagaaacaattatccatt 23153711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 94 - 225
Target Start/End: Complemental strand, 14626249 - 14626118
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  14626249 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 14626150  T
Q  194 gttggagcacgaatttagcaacaattatccat 225  Q
    |   ||||||||||||||||| ||||||||||    
T  14626149 gcaagagcacgaatttagcaataattatccat 14626118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 1650225 - 1650105
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||| | |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  1650225 gcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 1650126  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  1650125 agtaagagcacgaatctagca 1650105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 27751605 - 27751715
Alignment:
Q  142 accaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaaccc 241  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccatttattcaattcaaccc 27751704  T
Q  242 at-ttcataca 251  Q
    || ||||||||    
T  27751705 atattcataca 27751715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 25175680 - 25175815
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  25175680 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25175779  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| || || ||   ||||||||||||||||    
T  25175780 caaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 27654118 - 27653983
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  27654118 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 27654019  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    ||| |||| ||||| ||   ||||||||||||||||    
T  27654018 caagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 29666040 - 29666137
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||||||||||    
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 16825879 - 16825752
Alignment:
Q  88 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca--tacaattattatcaattcatgcatacaaacata 185  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||||| ||||||||| |  ||||| ||  |||||||||||||||||||||||    
T  16825879 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacata 16825780  T
Q  186 tcatcaaagttggagcacgaatttagca 213  Q
     ||||| ||   ||||||||||||||||    
T  16825779 acatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 19629567 - 19629621
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  19629567 gagcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 19629621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 15005107 - 15005038
Alignment:
Q  18 aatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatc 86  Q
    ||||||| |||| || ||| ||||||||| || ||||||| |||||||||||||||||||| ||||||||    
T  15005107 aatcaactacaaccacaacttataatcattcattctatcacaattcaacaacaacatgtcataattcatc 15005038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 18629689 - 18629608
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
T  18629689 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 15889914 - 15889838
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatc 86  Q
    ||||| ||||||||||||| || ||| ||||||||| || || |||| |||||| ||||||||||||| ||||||||    
T  15889914 catcaacaatcaaccacaaccacaacttataatcatgcattccatcacaattcatcaacaacatgtcataattcatc 15889838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 25640757 - 25640673
Alignment:
Q  17 caatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca-aattcatccattttgcacaatt 100  Q
    |||||||||||||  | ||| ||||||||| || || |||| |||||||||||||||||||| |||||||| |||  ||||||||    
T  25640757 caatcaaccacaacaacaacttataatcatgcattccatcaaaattcaacaacaacatgtcacaattcatcaattgagcacaatt 25640673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 29605616 - 29605696
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| ||||||||  || ||||||| |  ||||||||||| ||||||||||| || | || ||||||||||||    
T  29605616 aacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaattt 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 1556172 - 1556263
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  1556172 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 1556263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 16232059 - 16232150
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||||    
T  16232059 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaatt 16232150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 16887847 - 16887792
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| ||||||||||||||||| |||| |||| ||||||||||||    
T  16887847 caattatcatcaatttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 17083271 - 17083200
Alignment:
Q  136 aatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 207  Q
    ||||| ||||||||  || ||||||| | |||||||||||| |||||||||||||| | || ||||||||||    
T  17083271 aatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcatcataattagagcacgaat 17083200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 35136068 - 35136013
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||  |||| ||||||||||||    
T  35136068 caattatcatcaatttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 12229 - 12376
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| ||| ||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  12229 aaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcata 12328  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  12329 caaacatatcatcacagttagagcacgaatttagcaacaattatccat 12376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 6196 - 6064
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||| | ||||| | ||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  6196 gcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 6097  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  6096 agttggagcacgaatttagcaacaattatccat 6064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 37060 - 36912
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||| | ||||||||| |||||||||||||||    
T  37060 aaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcata 36961  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36960 caaacatatcatcacagttggagcacgaatttaacaacaattatccatt 36912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 48729 - 48861
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| |||||||  | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  48729 gcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 48828  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  48829 agttggagcacgaatttagcaacaattatccat 48861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 36210 - 36323
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   || ||||||||| |||||||||||||||| ||  |||||||||| ||||    
T  36210 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacata 36309  T
Q  178 caaacatatcatca 191  Q
    |||||||| |||||    
T  36310 caaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 252
Target Start/End: Complemental strand, 8312 - 8152
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  ||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||     
T  8312 gcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcac 8213  T
Q  193 agttggagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaa 252  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  8212 agttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaa 8152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 95 - 226
Target Start/End: Complemental strand, 26545 - 26414
Alignment:
Q  95 acaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 194  Q
    |||||||||| ||||| ||||||| |||||||  |||||||| ||| ||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  26545 acaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaag 26446  T
Q  195 ttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||| ||||    
T  26445 ttggagcacgaatttagcaacaattatacatt 26414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 34556 - 34432
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattca 228  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||    
T  34556 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccattca 34457  T
Q  229 ttcatttcaacccat-ttcatacaa 252  Q
    |||| |||||||||| |||||||||    
T  34456 ttcaattcaacccatattcatacaa 34432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 51314 - 51182
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| || ||||  |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  51214 agttggagcacgaatttagcaacaattatccat 51182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 8980 - 9111
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  8980 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 9079  T
Q  193 agttggagcacgaatttagcaacaattatcca 224  Q
    || |||||||||||||||||||||||||||||    
T  9080 agatggagcacgaatttagcaacaattatcca 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 148852 - 148981
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  148852 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 148951  T
Q  193 agttggagcacgaatttagcaacaattatc 222  Q
    ||||||||||| |||||| |||||||||||    
T  148952 agttggagcacaaatttaacaacaattatc 148981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 630 - 533
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  630 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccatt 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 123296 - 123163
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  123296 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 123197  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    | ||||||||||||||||||||||||||||||||    
T  123196 aattggagcacgaatttagcaacaattatccatt 123163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 5193 - 5060
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||| ||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||     
T  5193 gcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcac 5094  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||| |||||||||||||||||||||||||    
T  5093 agttggagtacgaatttagcaacaattatccatt 5060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 89550 - 89453
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  89550 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccatt 89453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 107835 - 107783
Alignment:
Q  174 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 226  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccatt 107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 79731 - 79786
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||| ||||||| |||||||||||||||||||||| |||| | ||||||||||    
T  79731 caattatcatcaatttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 41860 - 41992
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || ||||||| |||||||  | |||||||||| |||||||||   |||||||| |||||||||||||||||||||||||||||     
T  41860 gcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcac 41959  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||||||||||||||||||||||    
T  41960 agttggagcacgaatttagcaacaattatccat 41992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 128265 - 128169
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  128265 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccat 128169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    |||||||||| |||||||  |||||   || ||||||||| |||||||||||||||| ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

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Target: scaffold0001 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 172021 - 172168
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  172021 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 172120  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  172121 caaacatatcatcacagttggagcacgtatttagcaacagttatccat 172168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 177724 - 177871
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  |||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  177724 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 177823  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  177824 caaacatatcatcacagttggagcacgtatttagcaacagttatccat 177871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 164984 - 164930
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 252  Q
    ||||||||||||| ||||||||||| ||||||||   |||| |||||||||||||    
T  164984 gagcacgaatttaacaacaattatcaattcattccaatcaatccatttcatacaa 164930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 107878 - 108004
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||| | ||||| |||||||  || |||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  107878 gcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 107977  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||||||||||||||||||| |||||||    
T  107978 agttggagcacgaatttagtaacaatt 108004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatc-----aattcatgcatacaaacatatc 187  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  188 atcaaagttggagcacgaattt 209  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 247574 - 247441
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||| ||||| |||  ||||||||||||||| ||||||||||||||||||||||||||| |     
T  247574 gcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattac 247475  T
Q  193 agttggagcacgaatttagcaacaattatccatt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  247474 agttggagcacgaatttagcaacaattatccatt 247441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 9009 - 9141
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||| |||||     
T  9009 gcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcac 9108  T
Q  193 agttggagcacgaatttagcaacaattatccat 225  Q
    |  |||||||||||||||||||||||| |||||    
T  9109 aaatggagcacgaatttagcaacaattttccat 9141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  193 agttggagcacgaatttagca 213  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 167 - 283
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| | |||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 3094 - 3220
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||     
T  3094 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcac 3193  T
Q  193 agttggagcacgaatttagcaacaatt 219  Q
    ||   ||||||||||||||||| ||||    
T  3194 agcaagagcacgaatttagcaagaatt 3220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 9469 - 9371
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  9469 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 16367 - 16269
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  16367 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 43114 - 43226
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| ||||||||||  |||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  43114 aaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 43213  T
Q  178 caaacatatcatc 190  Q
     ||||||| ||||    
T  43214 gaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 3360 - 3474
Alignment:
Q  132 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattc 231  Q
    ||||||||| |||||||||||||||| ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||||||||||| ||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccatttattc 3459  T
Q  232 atttcaacccatttca 247  Q
    |  |||||||||||||    
T  3460 a-atcaacccatttca 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 272141 - 272288
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  ||||||||||||  ||| ||||||||||||||| |||||||||| ||||    
T  272141 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcata 272240  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaattatccat 225  Q
    |||||||||||| | |||||||| ||| ||||||||| | ||||||||    
T  272241 caaacatatcattacagttggagtacgtatttagcaatatttatccat 272288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 175  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 56196 - 56072
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattc 227  Q
    ||||||||||||| | | |||||||||||||||| ||||| ||||||| || || ||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  56196 aaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatctattc 56097  T
Q  228 attcatttcaacccatttcatacaa 252  Q
    ||||   |||||| |||||||||||    
T  56096 attccaatcaaccaatttcatacaa 56072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 191  Q
    ||||||| |||||||||| ||||||| |||||||  |||||||||||| || |||||||||| |||||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 21233 - 21110
Alignment:
Q  96 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 195  Q
    |||| |||||||||| ||||||| |||||||  |||||||||||| || |||||||||| |||||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  196 tggagcacgaatttagcaacaatt 219  Q
      ||||||||||||||||| ||||    
T  21133 aagagcacgaatttagcaagaatt 21110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  94 cacaattttcataacttttcattttc-acatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 175  Q
    |||||||| |||||||| |||||||  |||||||  |||||||||||| |||||||||||||||||||| |||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 10428 - 10335
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattat 221  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| ||   ||||||||||||||||||||||||    
T  10428 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattat 10335  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 8176 - 8257
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| || || ||||||||  || ||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  8176 aacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 45197 - 45244
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 175  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  45197 aaacatgtaatttcacccacaatcatacaattatcatcaattcatgca 45244  T

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Target: scaffold0066; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 54583 - 54630
Alignment:
Q  128 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 175  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||||||||    
T  54583 aaacatgcaatttcacccacaatcatacaattatcatcaattcatgca 54630  T

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Target: scaffold0058 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 70361 - 70307
Alignment:
Q  156 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  70361 aattatcatcaatttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

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Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0483 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 1089 - 1022
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca 78  Q
    ||||| |||| |||||||| || ||| ||||||||| || || |||||| ||||||||||||||||||    
T  1089 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtca 1022  T

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Target: scaffold0409 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 1427 - 1348
Alignment:
Q  131 catgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| |||| ||||||||||||    
T  1427 catgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 9682 - 9603
Alignment:
Q  131 catgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| |||| ||||||||||||    
T  9682 catgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold0109 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 45876 - 45809
Alignment:
Q  11 catcatcaatcaaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca 78  Q
    ||||| |||| |||||||| || ||| ||||||||| || || |||||| ||||||||||||||||||    
T  45876 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtca 45809  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 10854 - 10908
Alignment:
Q  155 caattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||| ||||||| |||||||||||||||||||||| || | |||||||||||    
T  10854 caattatcatcaatttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 22476 - 22422
Alignment:
Q  156 aattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||||| |||||||||||||||||||||| | || ||||||||||||    
T  22476 aattatcatcaatttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 2691 - 2772
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | || ||||||||||||    
T  2691 aacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatcatcataattagagcacgaattt 2772  T

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Target: scaffold0387 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 7180 - 7127
Alignment:
Q  198 gagcacgaatttagcaacaattatccattcattcatttcaacccatttcataca 251  Q
    |||||| |||||| ||||||||||| ||||||||   |||||||||||||||||    
T  7180 gagcacaaatttaacaacaattatcaattcattccaatcaacccatttcataca 7127  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 22510 - 22429
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||| || || ||||||||  || ||||||| ||||||| ||||||||||||||||| |||  |||| ||||||||||||    
T  22510 aacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatattatcctagttagagcacgaattt 22429  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

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Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 104691 - 104623
Alignment:
Q  142 accaacaatcatacaattattatcaattca-tgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||  || ||||||| ||||||| | |||||||||||||||||||| |||| ||||| ||||||    
T  104691 accaacaacaattcaattatcatcaatttaatgcatacaaacatatcatcatagttagagcatgaattt 104623  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 2397 - 2317
Alignment:
Q  129 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||| ||||| | ||||||||||||||    
T  2397 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 2317  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 22255 - 22199
Alignment:
Q  22 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatgtca 78  Q
    |||||||| || ||| ||||||||| || || |||||| ||||||||||||||||||    
T  22255 aaccacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtca 22199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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