View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6918_low_5 (Length: 623)

Name: NF6918_low_5
Description: NF6918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6918_low_5
NF6918_low_5
[»] chr6 (48 HSPs)
chr6 (1-623)||(33385391-33386002)
chr6 (222-623)||(33259660-33260069)
chr6 (39-309)||(33282300-33282561)
chr6 (338-526)||(31564627-31564815)
chr6 (348-475)||(24631856-24631983)
chr6 (39-207)||(33260104-33260266)
chr6 (482-623)||(9165260-9165407)
chr6 (493-623)||(33416229-33416359)
chr6 (62-296)||(31564219-31564454)
chr6 (90-200)||(33416561-33416671)
chr6 (345-465)||(34939755-34939873)
chr6 (351-433)||(2732194-2732274)
chr6 (358-478)||(281802-281920)
chr6 (338-443)||(7785678-7785781)
chr6 (517-623)||(24631978-24632084)
chr6 (345-417)||(32976035-32976107)
chr6 (338-417)||(4248991-4249070)
chr6 (346-432)||(29040104-29040188)
chr6 (358-417)||(32917254-32917313)
chr6 (338-417)||(31624315-31624396)
chr6 (358-418)||(283151-283211)
chr6 (358-417)||(3738126-3738185)
chr6 (358-417)||(27595521-27595580)
chr6 (346-417)||(27857415-27857486)
chr6 (494-537)||(31461608-31461651)
chr6 (255-314)||(33416475-33416534)
chr6 (358-443)||(2460105-2460188)
chr6 (490-536)||(5564222-5564268)
chr6 (374-443)||(9027611-9027678)
chr6 (351-476)||(11600821-11600944)
chr6 (493-539)||(31668781-31668827)
chr6 (338-443)||(32171500-32171603)
chr6 (360-418)||(34544100-34544158)
chr6 (338-443)||(34939546-34939649)
chr6 (486-535)||(2514634-2514683)
chr6 (487-536)||(3171521-3171570)
chr6 (486-539)||(3217279-3217332)
chr6 (494-535)||(4247731-4247772)
chr6 (486-539)||(4248886-4248939)
chr6 (493-526)||(20370840-20370873)
chr6 (403-467)||(27909637-27909699)
chr6 (269-306)||(33355463-33355500)
chr6 (358-418)||(1403052-1403112)
chr6 (383-438)||(2034425-2034478)
chr6 (358-418)||(2455866-2455926)
chr6 (373-417)||(3525181-3525225)
chr6 (354-433)||(10616492-10616568)
chr6 (486-541)||(30817655-30817711)
[»] scaffold0428 (2 HSPs)
scaffold0428 (39-559)||(3812-4332)
scaffold0428 (39-309)||(11691-11952)
[»] chr2 (44 HSPs)
chr2 (57-405)||(17443262-17443609)
chr2 (357-481)||(5759528-5759650)
chr2 (338-442)||(43456641-43456743)
chr2 (358-410)||(40943977-40944029)
chr2 (359-449)||(14299586-14299674)
chr2 (338-478)||(30552577-30552716)
chr2 (373-478)||(32821807-32821910)
chr2 (358-445)||(787363-787448)
chr2 (353-446)||(27237842-27237933)
chr2 (486-535)||(5045246-5045295)
chr2 (357-418)||(11344723-11344784)
chr2 (493-538)||(28933753-28933798)
chr2 (383-475)||(33525946-33526036)
chr2 (358-418)||(5902503-5902563)
chr2 (373-448)||(11063516-11063589)
chr2 (486-542)||(25609721-25609777)
chr2 (486-585)||(33197328-33197428)
chr2 (486-549)||(17952790-17952853)
chr2 (488-535)||(18962129-18962176)
chr2 (338-401)||(42852636-42852699)
chr2 (338-381)||(43199928-43199971)
chr2 (338-417)||(43529792-43529871)
chr2 (493-536)||(44443251-44443294)
chr2 (493-556)||(44606184-44606247)
chr2 (359-417)||(9878637-9878695)
chr2 (486-536)||(10143103-10143153)
chr2 (493-539)||(10190207-10190253)
chr2 (338-478)||(43141869-43142008)
chr2 (486-535)||(7282950-7282999)
chr2 (486-535)||(15119921-15119970)
chr2 (338-411)||(15120246-15120319)
chr2 (338-415)||(29430817-29430894)
chr2 (486-539)||(31461366-31461419)
chr2 (486-535)||(38239640-38239689)
chr2 (494-535)||(41033047-41033088)
chr2 (358-414)||(1318296-1318352)
chr2 (488-536)||(4026748-4026796)
chr2 (358-398)||(6547250-6547290)
chr2 (487-539)||(13864578-13864630)
chr2 (338-398)||(22878174-22878234)
chr2 (490-526)||(23747245-23747281)
chr2 (493-537)||(28902007-28902051)
chr2 (421-477)||(42419996-42420052)
chr2 (373-432)||(44606079-44606136)
[»] chr5 (36 HSPs)
chr5 (401-472)||(30653371-30653442)
chr5 (358-539)||(10391281-10391458)
chr5 (338-446)||(2880480-2880587)
chr5 (358-417)||(16380525-16380584)
chr5 (377-478)||(16889733-16889832)
chr5 (371-476)||(41957418-41957521)
chr5 (340-417)||(38047815-38047892)
chr5 (358-452)||(28586720-28586812)
chr5 (338-417)||(32172710-32172789)
chr5 (363-417)||(11457155-11457209)
chr5 (493-539)||(11684351-11684397)
chr5 (486-539)||(7096216-7096269)
chr5 (358-446)||(11700332-11700418)
chr5 (486-539)||(20982224-20982277)
chr5 (490-538)||(3951887-3951935)
chr5 (338-446)||(499665-499771)
chr5 (363-433)||(13264064-13264132)
chr5 (346-392)||(1084081-1084127)
chr5 (493-539)||(13224357-13224403)
chr5 (493-539)||(26516226-26516272)
chr5 (493-551)||(29588796-29588854)
chr5 (363-401)||(32190964-32191002)
chr5 (486-540)||(35135751-35135805)
chr5 (374-443)||(36774677-36774744)
chr5 (486-523)||(11615452-11615489)
chr5 (486-539)||(24084826-24084879)
chr5 (486-539)||(37063163-37063216)
chr5 (494-551)||(38819672-38819729)
chr5 (380-478)||(8651328-8651424)
chr5 (352-443)||(10280547-10280635)
chr5 (345-417)||(11095436-11095508)
chr5 (488-536)||(11835208-11835256)
chr5 (338-429)||(34205288-34205377)
chr5 (388-443)||(35963274-35963327)
chr5 (358-410)||(38036013-38036065)
chr5 (486-538)||(39128568-39128620)
[»] chr3 (41 HSPs)
chr3 (358-443)||(43115089-43115172)
chr3 (343-445)||(27016389-27016488)
chr3 (340-418)||(24624266-24624344)
chr3 (358-443)||(37273167-37273250)
chr3 (338-418)||(21872229-21872309)
chr3 (338-400)||(22667477-22667539)
chr3 (338-400)||(22724116-22724178)
chr3 (340-467)||(30923835-30923959)
chr3 (361-443)||(11039296-11039376)
chr3 (371-476)||(1217767-1217870)
chr3 (493-539)||(16790452-16790498)
chr3 (418-539)||(38462209-38462339)
chr3 (493-551)||(49739483-49739541)
chr3 (486-535)||(20192695-20192744)
chr3 (351-467)||(39311626-39311740)
chr3 (486-539)||(41028940-41028993)
chr3 (358-418)||(22232889-22232948)
chr3 (358-469)||(26542544-26542653)
chr3 (338-433)||(41724255-41724348)
chr3 (493-539)||(25964370-25964416)
chr3 (378-412)||(28801327-28801361)
chr3 (362-467)||(36646340-36646443)
chr3 (358-443)||(42745071-42745154)
chr3 (373-474)||(54837003-54837102)
chr3 (486-539)||(905059-905112)
chr3 (358-438)||(20194987-20195065)
chr3 (345-398)||(24158457-24158510)
chr3 (374-446)||(27290871-27290941)
chr3 (493-526)||(30669066-30669099)
chr3 (488-537)||(31364831-31364880)
chr3 (361-441)||(36200131-36200209)
chr3 (338-433)||(42817156-42817249)
chr3 (486-539)||(44374733-44374786)
chr3 (486-535)||(49546576-49546625)
chr3 (497-534)||(52413221-52413258)
chr3 (486-526)||(1395612-1395652)
chr3 (346-414)||(8933847-8933915)
chr3 (489-537)||(22667355-22667403)
chr3 (489-537)||(22723994-22724042)
chr3 (486-526)||(32555070-32555110)
chr3 (371-478)||(34254775-34254880)
[»] chr8 (37 HSPs)
chr8 (346-478)||(39551151-39551281)
chr8 (358-477)||(30191095-30191212)
chr8 (358-443)||(13000378-13000461)
chr8 (352-414)||(26410340-26410402)
chr8 (418-476)||(30277257-30277315)
chr8 (375-467)||(10722633-10722723)
chr8 (358-478)||(28769293-28769411)
chr8 (358-476)||(11569411-11569527)
chr8 (338-399)||(2364394-2364455)
chr8 (382-478)||(8062327-8062421)
chr8 (418-504)||(10079082-10079170)
chr8 (486-539)||(14482130-14482183)
chr8 (338-399)||(24326106-24326167)
chr8 (378-446)||(25869240-25869306)
chr8 (358-478)||(30389097-30389215)
chr8 (375-470)||(9540967-9541060)
chr8 (345-476)||(11415154-11415283)
chr8 (338-478)||(12361190-12361330)
chr8 (422-478)||(31705083-31705139)
chr8 (365-439)||(4055577-4055649)
chr8 (494-560)||(8823490-8823557)
chr8 (370-409)||(9562228-9562267)
chr8 (358-417)||(29169890-29169949)
chr8 (358-452)||(41606857-41606949)
chr8 (364-468)||(26479793-26479895)
chr8 (358-415)||(34770927-34770984)
chr8 (424-473)||(39268522-39268571)
chr8 (486-539)||(40356799-40356852)
chr8 (488-537)||(42597331-42597380)
chr8 (338-398)||(778465-778525)
chr8 (487-539)||(5226530-5226582)
chr8 (493-537)||(11569555-11569599)
chr8 (488-536)||(26215427-26215475)
chr8 (486-526)||(34080355-34080395)
chr8 (341-385)||(37353109-37353153)
chr8 (338-418)||(39881655-39881735)
chr8 (367-446)||(42370324-42370401)
[»] chr7 (44 HSPs)
chr7 (339-443)||(39345504-39345606)
chr7 (338-443)||(48157054-48157157)
chr7 (358-446)||(33894657-33894743)
chr7 (338-515)||(46281076-46281249)
chr7 (339-476)||(39334193-39334328)
chr7 (357-418)||(12834915-12834976)
chr7 (338-539)||(3610674-3610882)
chr7 (358-443)||(20553136-20553219)
chr7 (486-535)||(5276156-5276205)
chr7 (340-468)||(12234825-12234951)
chr7 (338-438)||(36598290-36598388)
chr7 (339-443)||(39360056-39360158)
chr7 (338-418)||(30751575-30751655)
chr7 (342-476)||(3468614-3468746)
chr7 (338-409)||(27121528-27121599)
chr7 (358-416)||(7453351-7453409)
chr7 (493-539)||(7513562-7513608)
chr7 (493-539)||(8445214-8445260)
chr7 (493-539)||(24973872-24973918)
chr7 (493-539)||(24975832-24975878)
chr7 (484-526)||(28178910-28178952)
chr7 (363-417)||(29574584-29574638)
chr7 (486-536)||(30133980-30134030)
chr7 (493-535)||(33894555-33894597)
chr7 (382-478)||(39551526-39551620)
chr7 (501-539)||(45078221-45078259)
chr7 (338-462)||(1710744-1710865)
chr7 (494-539)||(7244630-7244675)
chr7 (494-559)||(22388001-22388066)
chr7 (404-476)||(24363601-24363671)
chr7 (499-536)||(25670687-25670724)
chr7 (364-417)||(27517265-27517318)
chr7 (486-535)||(28165023-28165072)
chr7 (486-531)||(31341130-31341175)
chr7 (346-415)||(41040224-41040293)
chr7 (487-535)||(5373157-5373205)
chr7 (383-446)||(27496387-27496447)
chr7 (383-446)||(27503045-27503105)
chr7 (486-538)||(28340933-28340985)
chr7 (494-526)||(28613631-28613663)
chr7 (364-478)||(33645920-33646032)
chr7 (358-406)||(40009544-40009592)
chr7 (365-443)||(45859488-45859563)
chr7 (487-539)||(46213731-46213783)
[»] chr1 (39 HSPs)
chr1 (338-475)||(10199342-10199477)
chr1 (338-443)||(12564433-12564536)
chr1 (351-470)||(6279405-6279522)
chr1 (338-414)||(23373247-23373323)
chr1 (345-478)||(15581252-15581383)
chr1 (486-539)||(870973-871026)
chr1 (358-429)||(32515395-32515464)
chr1 (354-448)||(3597231-3597323)
chr1 (486-536)||(6933050-6933100)
chr1 (373-446)||(15579512-15579583)
chr1 (383-476)||(27140478-27140569)
chr1 (338-443)||(31517674-31517777)
chr1 (338-443)||(33723316-33723419)
chr1 (345-433)||(38170631-38170717)
chr1 (338-398)||(5157148-5157208)
chr1 (467-539)||(6659631-6659703)
chr1 (495-539)||(13037792-13037836)
chr1 (418-478)||(14629978-14630038)
chr1 (363-411)||(28467268-28467316)
chr1 (358-418)||(29723545-29723605)
chr1 (338-476)||(6292493-6292628)
chr1 (486-545)||(46499943-46500002)
chr1 (488-539)||(49557069-49557120)
chr1 (338-443)||(44815237-44815340)
chr1 (486-536)||(45999377-45999427)
chr1 (486-539)||(289168-289221)
chr1 (486-551)||(4200145-4200210)
chr1 (358-442)||(12477242-12477323)
chr1 (421-478)||(15361711-15361768)
chr1 (380-417)||(27145978-27146015)
chr1 (338-399)||(44375293-44375354)
chr1 (361-433)||(45327623-45327693)
chr1 (486-534)||(1730825-1730873)
chr1 (381-476)||(11639393-11639486)
chr1 (358-441)||(17420238-17420319)
chr1 (392-443)||(28689440-28689489)
chr1 (364-431)||(29929581-29929646)
chr1 (482-550)||(41638395-41638463)
chr1 (486-526)||(50319233-50319273)
[»] chr4 (37 HSPs)
chr4 (486-539)||(47970246-47970299)
chr4 (338-414)||(25717653-25717729)
chr4 (358-467)||(19304935-19305042)
chr4 (366-443)||(23819122-23819197)
chr4 (486-560)||(51555956-51556030)
chr4 (387-478)||(24929491-24929580)
chr4 (338-417)||(2996630-2996709)
chr4 (338-417)||(6428075-6428154)
chr4 (338-443)||(47970329-47970432)
chr4 (485-539)||(8422925-8422979)
chr4 (338-443)||(21157801-21157904)
chr4 (363-443)||(3176063-3176141)
chr4 (494-539)||(4191667-4191712)
chr4 (340-417)||(52754656-52754733)
chr4 (418-478)||(7694022-7694082)
chr4 (346-452)||(29467566-29467670)
chr4 (351-476)||(9680671-9680794)
chr4 (358-416)||(10172120-10172178)
chr4 (338-412)||(25434346-25434420)
chr4 (358-443)||(27123306-27123389)
chr4 (338-416)||(29375961-29376039)
chr4 (373-478)||(43932433-43932536)
chr4 (360-398)||(50396760-50396798)
chr4 (481-535)||(51044543-51044597)
chr4 (486-539)||(969434-969487)
chr4 (493-538)||(4471100-4471145)
chr4 (364-417)||(21043195-21043248)
chr4 (493-538)||(28623218-28623263)
chr4 (489-534)||(37636297-37636342)
chr4 (360-417)||(41097212-41097269)
chr4 (487-535)||(4798649-4798697)
chr4 (366-418)||(6987703-6987755)
chr4 (358-398)||(9316601-9316641)
chr4 (367-434)||(25583634-25583699)
chr4 (339-407)||(28232612-28232680)
chr4 (493-537)||(32066505-32066549)
chr4 (487-551)||(44319866-44319929)
[»] scaffold0311 (1 HSPs)
scaffold0311 (346-445)||(10559-10656)
[»] scaffold0590 (1 HSPs)
scaffold0590 (486-539)||(1163-1216)
[»] scaffold0275 (1 HSPs)
scaffold0275 (486-539)||(2759-2812)
[»] scaffold0020 (1 HSPs)
scaffold0020 (338-476)||(159907-160043)
[»] scaffold0100 (1 HSPs)
scaffold0100 (493-539)||(42545-42591)
[»] scaffold0060 (1 HSPs)
scaffold0060 (493-539)||(63381-63427)
[»] scaffold0024 (1 HSPs)
scaffold0024 (351-440)||(27612-27699)
[»] scaffold0654 (1 HSPs)
scaffold0654 (486-551)||(6726-6791)
[»] scaffold0014 (1 HSPs)
scaffold0014 (486-551)||(116645-116710)
[»] scaffold0110 (2 HSPs)
scaffold0110 (338-477)||(4157-4294)
scaffold0110 (496-536)||(35895-35935)
[»] scaffold0091 (1 HSPs)
scaffold0091 (487-539)||(5947-5999)
[»] scaffold0032 (1 HSPs)
scaffold0032 (373-417)||(42691-42735)
[»] scaffold0003 (1 HSPs)
scaffold0003 (388-467)||(306335-306412)


Alignment Details
Target: chr6 (Bit Score: 539; Significance: 0; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 1 - 623
Target Start/End: Complemental strand, 33386002 - 33385391
Alignment:
Q  1 tagttagattatttaacagatggatgannnnnnnnnncttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaa 100  Q
    |||||||||||||||||||||||||||          |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33386002 tagttagattatttaacagatggatgattttttttttcttttgttatgaagggagttttatttaactttgaatcttctatggataaatgtaactgaagaa 33385903  T
Q  101 aagaataaagatccctctcctgaaagtcctccaactgaagaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcat 200  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33385902 aagaataaagttccctctcctgaaagtcctccaactgaagaagtgccagaacaaacaccagtagcagtacaagttgaaggtgaagaagttgcaattgcat 33385803  T
Q  201 taaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttattt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33385802 taaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttattt 33385703  T
Q  301 catatttcatttctgaaagatgtataaacaaggatgcatttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagc 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33385702 catatttcatttctgaaagatgtataaacaaggatgcatttgaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagc 33385603  T
Q  401 tcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcataagtatgacttcattttatc 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33385602 tcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcataagtatgacttcattttatc 33385503  T
Q  501 ttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggtcttaggtttcc 600  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  33385502 ttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgttta-----------tcttaggtttcc 33385414  T
Q  601 agcctgttcacctatctttgaat 623  Q
    |||||||||||||||||||||||    
T  33385413 agcctgttcacctatctttgaat 33385391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 222 - 623
Target Start/End: Complemental strand, 33260069 - 33259660
Alignment:
Q  222 tctaactctaatggacaaaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttctgaaagat 321  Q
    |||||||||||  ||||||| || |||||| | | |||||||| | |||||||||||||||||||||||||||||  |||||||| || |||| ||||||    
T  33260069 tctaactctaacagacaaactggcattacaactttagatgaagtcctgagcaaaggttgcaatttcatcttatttgcttcatatt-caattctcaaagat 33259971  T
Q  322 gtataaacaaggatgcatttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagt 421  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||     
T  33259970 gtataaacaaggatgtatttgaacttatatattgatataagcacttgccaaactgtttggaagagtttatggaaacggctaatgacatgtccataaaagc 33259871  T
Q  422 tgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgttataaa 512  Q
    ||||||||||  |||| |||| ||||| ||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||    
T  33259870 tgttttcagccattttacatatactgtatagaaaagcttatgaaaatagcttatagcatataggaaaacagtatgacttcaatttatcttttgttataaa 33259771  T
Q  513 aattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggtcttaggtttccagcctgttcacc 612  Q
    ||| |||||||||| |||||||||||||||||  ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||  | ||     
T  33259770 aatagcttatacataagcacttatatgtaaagctcttatcttataagcttgaattaggctgtttatccaaacaaggtcttaggtttccagccttcttaca 33259671  T
Q  613 tatctttgaat 623  Q
    |||||||||||    
T  33259670 tatctttgaat 33259660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 39 - 309
Target Start/End: Complemental strand, 33282561 - 33282300
Alignment:
Q  39 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 138  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| || | ||||||| ||||||||  || ||| ||||||||||||||||||| || ||||    
T  33282561 ttttgttatgaagggagtttcatttaaccttgaatcctctattgacagatgtaacagaagaaaattatcaagttccctctcctgaaagtcctgcacctga 33282462  T
Q  139 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggaca 238  Q
    ||||||||||||||||||||||||||||  ||      ||| ||||||||||||||||||||||||||| ||| |  || ||||||||||||||| ||||    
T  33282461 agaagtgccagaacaaacaccagtagcaacac------aagttgaagaagttgcaattgcattaaaaaa-aaaga--agtgtatctaactctaatagaca 33282371  T
Q  239 aaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttca 309  Q
    ||| || |||||| | | |||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  33282370 aactggcattacaactttagatgaaggcctgagcaaaggttgcaatttcatcttatttgcttcatatttca 33282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 526
Target Start/End: Original strand, 31564627 - 31564815
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||| |||||||| ||||||||| || |||||||||||| |||||||||||||||||| |||    
T  31564627 atttgaacttatacactcatattagcacttgtgagactgtttcgaagagttaatggaaacaactaatgacatgtccacaaaagttgttttcagcttattt 31564726  T
Q  438 ccataaactgtctagaaaagcttatgaaaatagcttatagcata--agtatgacttcattttatcttttgttataaaaattgcttatacat 526  Q
    |||||   |||||||||||||||||||||||  ||| ||| | |  ||| |||||||||||||||  ||||||||||||| ||||||||||    
T  31564727 ccatatgttgtctagaaaagcttatgaaaatcacttgtaggaaaacagtgtgacttcattttatc--ttgttataaaaatagcttatacat 31564815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 348 - 475
Target Start/End: Original strand, 24631856 - 24631983
Alignment:
Q  348 atatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactg 447  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||| |||||| || |||    
T  24631856 atatactgatataagcacttgtgaaactatttggaagagtttatggaaacaactcatgatatgtccataaaagctgtttttagcttatttccaaaagctg 24631955  T
Q  448 tctagaaaagcttatgaaaatagcttat 475  Q
    | ||||||||||||| |  |||||||||    
T  24631956 tttagaaaagcttataaccatagcttat 24631983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 39 - 207
Target Start/End: Complemental strand, 33260266 - 33260104
Alignment:
Q  39 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 138  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| || | ||||||| ||||||||  || ||| ||||||||||||||| ||| |||| ||    
T  33260266 ttttgttatgaagggagtttcatttaaccttgaatcctctattgacagatgtaacagaagaaaacgatcaagttccctctcctgaaagccctgcaaccga 33260167  T
Q  139 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaa 207  Q
    ||||||||||||||||||||||||||||| ||      ||| |||||||||||||||||||||||||||    
T  33260166 agaagtgccagaacaaacaccagtagcagcac------aagttgaagaagttgcaattgcattaaaaaa 33260104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 482 - 623
Target Start/End: Complemental strand, 9165407 - 9165260
Alignment:
Q  482 agtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatcca 581  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||| || |||||||||| |||  ||||||||||||| ||| ||||||  |||||||||    
T  9165407 agtatgacttcatcttaccttttgttataaaaatagcttatacataagtacttatatgt-aagcacttatcttataagctttaattagggcgtttatcca 9165309  T
Q  582 aacaagg-------tcttaggtttccagcctgttcacctatctttgaat 623  Q
    |||||||       || ||||||| ||||||||||||||||||||||||    
T  9165308 aacaaggtcatagctcataggtttgcagcctgttcacctatctttgaat 9165260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 493 - 623
Target Start/End: Complemental strand, 33416359 - 33416229
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggtctt 592  Q
    ||||||||||||||||||||||| |||||||||| |||||||  ||    || |||||||||||||| ||| |||||| ||||||||||||||||||| |    
T  33416359 attttatcttttgttataaaaatagcttatacataagcactttgataatgagcgcttatcttataagctttaattaggttgtttatccaaacaaggtcat 33416260  T
Q  593 aggtttccagcctgttcacctatctttgaat 623  Q
     | |||| || ||||||||||||||||||||    
T  33416259 ggttttctagtctgttcacctatctttgaat 33416229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 62 - 296
Target Start/End: Original strand, 31564219 - 31564454
Alignment:
Q  62 ttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactgaagaag---tgccagaacaaacac 158  Q
    ||||||||||||| | |||| | | ||||||| ||||||||  || ||| |||||||||||| |||||| | ||||||||||   ||| ||| || ||||    
T  31564219 ttaactttgaatcatgtatg-acagatgtaacagaagaaaacgattaaggtccctctcctgagagtcctgccactgaagaagaagtgcaagagcagacac 31564317  T
Q  159 cagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtcag 258  Q
    | || | ||||||| |||||| ||||||||||||||||||| |   | |||||||||| | ||||||| ||||||||||||||||| |||||  | ||||    
T  31564318 ctgtggtagtacaagttgaagatgaagaagttgcaattgca-tccgagacaaacaacaacttatctaattctaatggacaaaccggcattacttcttcag 31564416  T
Q  259 atgaaggcttgagcaaaggttgcaatttcatcttattt 296  Q
    |  |||||| ||| || |||| ||||||||||||||||    
T  31564417 acaaaggctcgagtaatggtttcaatttcatcttattt 31564454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 33416671 - 33416561
Alignment:
Q  90 taactgaagaaaagaataaagatccctctcctgaaagtcctccaactgaagaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagt 189  Q
    ||||||||||||| ||| ||| ||||||||||||||||||| | |||||||| |||| |||||||||||| ||| ||| |||| |||||| |||||  ||    
T  33416671 taactgaagaaaacaatcaagttccctctcctgaaagtcctgccactgaagaggtgcaagaacaaacacctgtatcagcacaagttgaagatgaagcggt 33416572  T
Q  190 tgcaattgcat 200  Q
    |||||||||||    
T  33416571 tgcaattgcat 33416561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 345 - 465
Target Start/End: Complemental strand, 34939873 - 34939755
Alignment:
Q  345 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa 444  Q
    ||||| || ||| |||| || |||||||||||||| | |||| ||| |||||||||| ||||||||||||||||  ||||||||||||| ||||||||||    
T  34939873 cttatctagtgacataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaa--ttgttttcagcttatttccataaa 34939776  T
Q  445 ctgtctagaaaagcttatgaa 465  Q
    || || || | ||||||||||    
T  34939775 ctctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 433
Target Start/End: Original strand, 2732194 - 2732274
Alignment:
Q  351 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 433  Q
    |||||| |||||||||||||| ||||||||||| || |||||||||||||| ||||  ||||||||||  |||||||||||||    
T  2732194 tactgacataagcacttgtgagactgtttggaaaagcttatggaaacagctaatgatctgtccataaa--ttgttttcagctt 2732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 281802 - 281920
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 457  Q
    ||||| |||||||| ||||||||| |||| | |||||| || || |||||||||| ||||  |||||||||||||| ||||||| | || ||||| | ||    
T  281802 ataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataa--gttgttttcagcttatttccatgagctctctaggatag 281899  T
Q  458 cttatgaaaatagcttatagc 478  Q
    |||||||| | ||||||||||    
T  281900 cttatgaacacagcttatagc 281920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 7785678 - 7785781
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    ||||||| |||| |||||| |||||||||| ||  |||| ||| | |||||||  ||||||||| |||||||||| ||||  |||||||||||||| |||    
T  7785678 atttgaatttatctactgacataagcacttttgggactgattgaaggagtttacagaaacagcttatgacatgtctataa--gttgttttcagcttattt 7785775  T
Q  438 ccataa 443  Q
    ||||||    
T  7785776 ccataa 7785781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 517 - 623
Target Start/End: Original strand, 24631978 - 24632084
Alignment:
Q  517 gcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggtcttaggtttccagcctgttcacctatc 616  Q
    |||||| ||| ||||||||||||  ||| | |||||||||||  ||| |||| | || |||||||||| ||||||||| |||||| | |||||||| |||    
T  24631978 gcttatgcataagcacttatatgataagcgtttatcttataatatttaattaagttgcttatccaaacgaggtcttagttttccaacttgttcaccaatc 24632077  T
Q  617 tttgaat 623  Q
    |||||||    
T  24632078 tttgaat 24632084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 417
Target Start/End: Complemental strand, 32976107 - 32976035
Alignment:
Q  345 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    ||||| |||||  ||||| |||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||    
T  32976107 cttatttactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataa 32976035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 4249070 - 4248991
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||| || || ||||||| ||||||||||||||| ||||| |||||| ||||| ||||| || ||| |||||||||||    
T  4249070 atttgagctgatttactgatgtaagcacttgtgaaattgttttgaagagcttatgaaaacaccttatggcatgtccataa 4248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 346 - 432
Target Start/End: Original strand, 29040104 - 29040188
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagct 432  Q
    ||||||||| | |||||||||||||| ||||||||| | ||||  | ||| ||||| |||||||||||||||||  |||||||||||    
T  29040104 ttatatactaacataagcacttgtgagactgtttgggatagttatttgaatcagcttatgacatgtccataaaa--tgttttcagct 29040188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 32917313 - 32917254
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||| ||||||||| ||||||||| |||| ||||||||||| || |||||||||||||||    
T  32917313 ataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataa 32917254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 31624396 - 31624315
Alignment:
Q  338 atttgaacttatatactgatataagc--acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||| |||||||||||| ||||||    ||| || ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  31624396 atttgagcttatatactgacataagctgttttgagagactgtttggtagaatttatgaaaacagctcatgacatgtccataa 31624315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 283211 - 283151
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    ||||||||||||||||||||||||| ||   |||  |||||||| ||||||||||||||||    
T  283211 ataagcacttgtgaaactgtttggaggaacgtataaaaacagcttatgacatgtccataaa 283151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 3738185 - 3738126
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||| ||||||| |||||||| ||||  || ||||||||||| |||||||||||||||    
T  3738185 ataagcccttgtgagactgtttgaaagatcttgtggaaacagcttatgacatgtccataa 3738126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 27595521 - 27595580
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||||| ||| ||||||||| ||| |||||||||||| || ||||||||| |||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataa 27595580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 417
Target Start/End: Complemental strand, 27857486 - 27857415
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||| |||||| |||  ||||||||||||||||||| |||| ||||| ||||| || ||||||| |||||||    
T  27857486 ttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataa 27857415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 31461651 - 31461608
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcacttata 31461608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 33416534 - 33416475
Alignment:
Q  255 tcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttct 314  Q
    ||||||||||||| ||| ||||||| | ||||||||||||||  ||||||||||| ||||    
T  33416534 tcagatgaaggctcgagtaaaggtttccatttcatcttatttgcttcatatttcaattct 33416475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 443
Target Start/End: Original strand, 2460105 - 2460188
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||| |||||||| ||||||||  |||| ||||||||||| || ||||||||||  |  |||||||||||| ||| |||||||||    
T  2460105 ataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc--tttaagttgttttcaacttatttccataa 2460188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 536
Target Start/End: Original strand, 5564222 - 5564268
Alignment:
Q  490 ttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||||    
T  5564222 ttcattttatcttttgctatataaatagcttatacatcagaacttat 5564268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 9027678 - 9027611
Alignment:
Q  374 ctgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||||| ||||| ||||||||| | || |||||||||||||  |||||||||||||||| ||| |||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccat--aagttgttttcagcttattttcataa 9027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 476
Target Start/End: Original strand, 11600821 - 11600944
Alignment:
Q  351 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 450  Q
    |||||| |||| |||||||||  |||||| | ||||||| || |||||||| |||||||||||  ||||  | |||||||||| ||| ||||  || |      
T  11600821 tactgacataaacacttgtgaggctgttttgtagagtttttgaaaacagcttatgacatgtcc--aaaaactattttcagcttattttcataggctcttc 11600918  T
Q  451 agaaaagcttatgaaaatagcttata 476  Q
    |||| |||||||||||||| ||||||    
T  11600919 agaacagcttatgaaaataacttata 11600944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Original strand, 31668781 - 31668827
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||| |||||||||| |||| |||||||||| ||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcacttatatg 31668827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 443
Target Start/End: Complemental strand, 32171603 - 32171500
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||||||||| |||||| ||||||| |||||| |||| |||| |||| ||| ||||||| || |||| |  ||||| ||   |||||||||||| |||    
T  32171603 atttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaa--ctgttttcagcttattt 32171506  T
Q  438 ccataa 443  Q
    ||||||    
T  32171505 ccataa 32171500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 34544100 - 34544158
Alignment:
Q  360 aagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||||||||||||| |||| ||||  ||||| |||||| | ||||||||||||||||    
T  34544100 aagcacttgtgaaactatttgaaagatcttatgaaaacagtttatgacatgtccataaa 34544158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 443
Target Start/End: Complemental strand, 34939649 - 34939546
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||||||||| || |||  |||  |||||| ||| ||||||  |||| ||||||||||| || |||||| |||| |||  |||||||||||||| |||    
T  34939649 atttgaacttatctagtgacgtaacgacttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaa--gttgttttcagcttattt 34939552  T
Q  438 ccataa 443  Q
    ||||||    
T  34939551 ccataa 34939546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 2514683 - 2514634
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||| |||||||||||| ||||| |||| |||||||||| ||||||||    
T  2514683 tgactttattttatcttttattatagaaatagcttatacataagcactta 2514634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 3171521 - 3171570
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    ||||| ||||||||||||||||||||||| |||||| ||| ||| |||||    
T  3171521 gacttaattttatcttttgttataaaaatagcttatgcataagcgcttat 3171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 3217279 - 3217332
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||| | ||| |||||| |||||||||| ||||||||||||    
T  3217279 tgactttattttatcttctcttacaaaaatagcttatacataagcacttatatg 3217332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 4247731 - 4247772
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    ||||||||||||||||| |||| |||||||||| ||||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataagcactta 4247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 4248939 - 4248886
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||  |||| ||||||| || ||||||||||||    
T  4248939 tgactttattttatcttttgttattgaaatagcttatatataagcacttatatg 4248886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 526
Target Start/End: Complemental strand, 20370873 - 20370840
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacat 526  Q
    ||||||||||||||||||||||| ||||||||||    
T  20370873 attttatcttttgttataaaaatagcttatacat 20370840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 467
Target Start/End: Original strand, 27909637 - 27909699
Alignment:
Q  403 atgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaa 467  Q
    |||||||||||||||  |||||||||||||| ||||||||| || || || ||||||||| ||||    
T  27909637 atgacatgtccataa--gttgttttcagcttatttccataagctctccagtaaagcttataaaaa 27909699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 33355500 - 33355463
Alignment:
Q  269 gagcaaaggttgcaatttcatcttatttatttcatatt 306  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  33355500 gagcaaaggttgcaatttcatcttatttgcttcatatt 33355463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 1403112 - 1403052
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||||||||||| ||||| ||| ||||||||| |||||| || ||||||| || |||||    
T  1403112 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaa 1403052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 2034425 - 2034478
Alignment:
Q  383 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 438  Q
    ||||||||||||||||||| ||||||| |||||  ||| |||||||||||| ||||    
T  2034425 agagtttatggaaacagcttatgacatttccat--aagctgttttcagcttatttc 2034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 2455926 - 2455866
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    ||||||||||| || | ||||| |||||| ||||||||||| || |||||||| |||||||    
T  2455926 ataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaa 2455866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 3525225 - 3525181
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||| ||||||||||||||||| || | |||||||||||||||    
T  3525225 actgttcggaagagtttatggaaatagtttatgacatgtccataa 3525181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 433
Target Start/End: Original strand, 10616492 - 10616568
Alignment:
Q  354 tgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 433  Q
    ||||||||||| ||||||| || ||||| |||| ||||||||||| || ||||||||||| |  ||||||| ||||||||    
T  10616492 tgatataagcatttgtgaa-ctatttgggagagcttatggaaacaacttatgacatgtccgt--aagttgtgttcagctt 10616568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 30817655 - 30817711
Alignment:
Q  486 tgacttcattttatcttttgttat-aaaaattgcttatacatcagcacttatatgta 541  Q
    |||||| |||||| |||||||||| |||||| || ||||||| ||||||||||||||    
T  30817655 tgactttattttaccttttgttataaaaaatagcatatacataagcacttatatgta 30817711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 264; Significance: 1e-147; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 39 - 559
Target Start/End: Complemental strand, 4332 - 3812
Alignment:
Q  39 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 138  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| || | ||||||| ||||||||  || ||| |||| |||||||||||||| || ||||    
T  4332 ttttgttatgaagggagtttcatttaaccttgaatcctctattgacagatgtaacagaagaaaacgatcaagttcccactcctgaaagtcctgcacctga 4233  T
Q  139 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggaca 238  Q
    ||||||||||||||||||||||||||||  |||| ||||||      |||||||||||||||||||||| ||| ||  | ||||||||||||||| ||||    
T  4232 agaagtgccagaacaaacaccagtagcatcacaagttgaag------aagttgcaattgcattaaaaaa-aaagaa--gtgtatctaactctaatagaca 4142  T
Q  239 aaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttctgaaagatgtataaacaaggatgca 338  Q
    ||| || |||||| | | |||||||||| |||||||||||| ||||||||||||||||  ||| ||||||| |||| |||||| |||||||||||||| |    
T  4141 aactggcattacaactttagatgaaggcctgagcaaaggttacaatttcatcttattttcttcgtatttcaattctcaaagatatataaacaaggatgta 4042  T
Q  339 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 438  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||||     
T  4041 tttgaacttatatattgatataagcacttgtgagactgtttggaagagtttatggaaacggctcatgacatgtccataaaagctgttttcagccatttta 3942  T
Q  439 cataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgttataaaaattgcttatacatcag 529  Q
    |||| ||||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||||| ||||| |||| ||    
T  3941 catatactgtctagaaaagcttatgaaaatagcttatagcatataggaaaacagtatgacttcagtttatcttttgttataaaaatagcttacacataag 3842  T
Q  530 cacttatatgtaaagtgcttatcttataag 559  Q
    ||||||||||||||| ||||||||||||||    
T  3841 cacttatatgtaaagcgcttatcttataag 3812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 39 - 309
Target Start/End: Original strand, 11691 - 11952
Alignment:
Q  39 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 138  Q
    ||||||||||||||||| |||||||||||||||||| ||||| || | ||||||| ||||||||  || ||| ||||||||||||||||||| || ||||    
T  11691 ttttgttatgaagggagttttatttaactttgaatcctctatcgacagatgtaacagaagaaaattatcaagttccctctcctgaaagtcctgcacctga 11790  T
Q  139 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggaca 238  Q
    ||||||||||||||||||||||||||||| ||      ||| ||||||||||||||||||||||||||| ||| |  || ||||||||||||||| ||||    
T  11791 agaagtgccagaacaaacaccagtagcagcac------aagttgaagaagttgcaattgcattaaaaaa-aaaga--agtgtatctaactctaatagaca 11881  T
Q  239 aaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttca 309  Q
    ||| || |||||| | | |||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  11882 aactggcattacaactttagatgaaggcctgagcaaaggttgcaatttcatcttatttgcttcatatttca 11952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 57 - 405
Target Start/End: Original strand, 17443262 - 17443609
Alignment:
Q  57 tttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactgaagaagtgccagaacaaac 156  Q
    |||||||||||||||||| |||||| | | ||||||| |||||||| ||| ||| || |||||||||||||||| ||||  |||||||||||||||||||    
T  17443262 tttatttaactttgaatcctctatgaacagatgtaacagaagaaaacaatgaagttctctctcctgaaagtcctgcaaccaaagaagtgccagaacaaac 17443361  T
Q  157 accagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtc 256  Q
    ||||| ||| | |||| ||||| ||||||||||||||||||||||  ||| |||||||  |||||||||||||||||||||||||| | |||||||| ||    
T  17443362 accagcagcggcacaagttgaacgtgaagaagttgcaattgcatttgaaa-caaacaatggcgtatctaactctaatggacaaaccagcattacagcttc 17443460  T
Q  257 agatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttctgaaagatgtataaacaaggatgcatttgaacttatatactga 356  Q
    |||||||||||||| |||||||||||||||||||||||||  |||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  17443461 agatgaaggcttgaccaaaggttgcaatttcatcttatttgcttcaaatttcaattctcaaagatgtataaacaaggatgtatttgaacttatatactga 17443560  T
Q  357 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatg 405  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17443561 tataagcacttgtgagactgtttggaagagtttatggaaacagctcatg 17443609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 481
Target Start/End: Original strand, 5759528 - 5759650
Alignment:
Q  357 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgt-tttcagcttttttccataaactgtctagaaa 455  Q
    |||||| |||||||| ||||||||| |||| |||||||||||||| | |||||||||||  ||||||| ||||||||| ||| || ||||  || ||||     
T  5759528 tataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccat--aagttgtgtttcagcttattttcacaaaccctccagaat 5759624  T
Q  456 agcttatgaaaatagcttatagcata 481  Q
    |||||||||||| |||||||||||||    
T  5759625 agcttatgaaaacagcttatagcata 5759650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 442
Target Start/End: Original strand, 43456641 - 43456743
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||||||||| |||| | |||| ||||||| | |||||||| ||||| || || ||||| |||||||||||||||||||   |||||||||||| |||    
T  43456641 atttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaa--ctgttttcagcttattt 43456738  T
Q  438 ccata 442  Q
    |||||    
T  43456739 ccata 43456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 40944029 - 40943977
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatg 410  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  40944029 ataagcacttgtgaaactgtttggaaaagtttatgaaaacagcttatgacatg 40943977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 14299586 - 14299674
Alignment:
Q  359 taagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtc 449  Q
    |||||||||| |  |||||||||||||||||||||||||| || ||||||| |||||| |  ||||||||||||| |||| |||| |||||    
T  14299586 taagcacttgagggactgtttggaagagtttatggaaacaacttatgacatatccataca--ttgttttcagcttatttctataagctgtc 14299674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 338 - 478
Target Start/End: Original strand, 30552577 - 30552716
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagtt-gttttcagcttttt 436  Q
    |||||| ||||| ||||| ||||||||||| ||||||||||||  | || |||| |||||| || |||||||||| ||  ||||| ||||| ||||| ||    
T  30552577 atttgagcttatctactggtataagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatgtcaat--aagttggtttttagcttatt 30552674  T
Q  437 tccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    ||||||| || ||||| | || |||||||||||  |||||||    
T  30552675 tccataagctctctaggatagtttatgaaaataatttatagc 30552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 373 - 478
Target Start/End: Complemental strand, 32821910 - 32821807
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 472  Q
    ||||||||||||||||||| |||||| || |||||||||||||  ||| ||||||||| || |||| |||| || | ||| | |||||||||||| || |    
T  32821910 actgtttggaagagtttatagaaacaacttatgacatgtccat--aagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtt 32821813  T
Q  473 tatagc 478  Q
    ||||||    
T  32821812 tatagc 32821807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 445
Target Start/End: Complemental strand, 787448 - 787363
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 445  Q
    |||||||||||||| ||||||||  |||  ||||| |||||||| |||||||||||||  ||| |||||||||||| | |||||||||    
T  787448 ataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccat--aagctgttttcagcttatctccataaac 787363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 27237842 - 27237933
Alignment:
Q  353 ctgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    |||| |||| |||| |||||||||||||| |||  |||| ||||||||| ||||||||| |||  ||| |||||| ||||| ||||||||||||    
T  27237842 ctgacataaacactagtgaaactgtttggtagaacttatagaaacagcttatgacatgtacat--aagctgtttttagcttatttccataaact 27237933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 5045246 - 5045295
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||| ||||||||||||||||||||||| |||||||||| | ||||||    
T  5045246 tgactttattttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 11344723 - 11344784
Alignment:
Q  357 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||| |||||||||||||||||  |||  ||||||||||| || ||||||||||||||||    
T  11344723 tataagtacttgtgaaactgtttgacagaccttatggaaacaacttatgacatgtccataaa 11344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 28933798 - 28933753
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatat 538  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||    
T  28933798 attttatcttttgttatataaatagcttatacatgagcacttatat 28933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 383 - 475
Target Start/End: Original strand, 33525946 - 33526036
Alignment:
Q  383 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttat 475  Q
    |||||| ||||||||| || || ||||||||||||  |||| ||||||||| |||| ||||||  ||||| | |||||||||||| |||||||    
T  33525946 agagttcatggaaacaacttataacatgtccataa--gttggtttcagcttatttctataaaccttctagtatagcttatgaaaaaagcttat 33526036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 418
Target Start/End: Original strand, 5902503 - 5902563
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||| ||||||||| |||||||||||||  ||||| |||||||| ||||||||| ||||||    
T  5902503 ataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataaa 5902563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 448
Target Start/End: Complemental strand, 11063589 - 11063516
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgt 448  Q
    |||||||||||||| |||||||||||  | |||||||||||||  |||||||||| ||||| ||| ||||| ||||    
T  11063589 actgtttggaagagcttatggaaacatattatgacatgtccat--aagttgtttttagcttattttcataagctgt 11063516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 542
Target Start/End: Complemental strand, 25609777 - 25609721
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaa 542  Q
    |||||| |||||||||||| ||||| |||| |||||||||| ||||||||| |||||    
T  25609777 tgactttattttatcttttcttatagaaatagcttatacataagcacttatgtgtaa 25609721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 585
Target Start/End: Original strand, 33197328 - 33197428
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagt-tttcattaggctgtttatccaaac 584  Q
    |||||| ||| |||||||||||||| |||| ||||||| || ||||||||||||  ||| | |||| |||||||| ||| |||  | |||||||||||||    
T  33197328 tgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagtgtttaatttagttgtttatccaaac 33197427  T
Q  585 a 585  Q
    |    
T  33197428 a 33197428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 17952790 - 17952853
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgctt 549  Q
    |||||| |||||||||||||||||| |||| ||||||| || ||| ||||||||  ||||||||    
T  17952790 tgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataagtgctt 17952853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 535
Target Start/End: Original strand, 18962129 - 18962176
Alignment:
Q  488 acttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||| ||||||||||||||||||||||| ||| |||||| ||||||||    
T  18962129 actttattttatcttttgttataaaaatagctaatacataagcactta 18962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 401
Target Start/End: Original strand, 42852636 - 42852699
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagct 401  Q
    |||||||||||| | |||  |||||||||||||| ||||||||||||||  |||| ||||||||    
T  42852636 atttgaacttatctgctggcataagcacttgtgagactgtttggaagagcctatgaaaacagct 42852699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 381
Target Start/End: Complemental strand, 43199971 - 43199928
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttgg 381  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  43199971 atttgaacttatctactcatataagcacttgtgagactgtttgg 43199928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 417
Target Start/End: Original strand, 43529792 - 43529871
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||| ||||| || || ||||||||||| ||| ||||||||| ||| |||||| |||||||| ||| ||||| |||||    
T  43529792 atttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataa 43529871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 536
Target Start/End: Complemental strand, 44443294 - 44443251
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||||||||||||| |||||||| |||||||||| |||||||||    
T  44443294 attttatcttttgtaataaaaatagcttatacataagcacttat 44443251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 556
Target Start/End: Original strand, 44606184 - 44606247
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttat 556  Q
    ||||||||||||||||| ||||| |||||||||| | |||||||||   ||| |||||||||||    
T  44606184 attttatcttttgttatgaaaatagcttatacataaacacttatataataagcgcttatcttat 44606247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 9878637 - 9878695
Alignment:
Q  359 taagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    ||||||||| ||| |||||  ||||||| ||||||||||| || |||||||||||||||    
T  9878637 taagcacttctgagactgtagggaagagcttatggaaacaacttatgacatgtccataa 9878695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 10143153 - 10143103
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||||| |||||||||||||||||| ||||  ||||||||| |||||||||    
T  10143153 tgacttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 10190253 - 10190207
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||| |||||||||||||| | |||||||| ||||||||||||    
T  10190253 attttatcctttgttataaaaatagtttatacataagcacttatatg 10190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 478
Target Start/End: Complemental strand, 43142008 - 43141869
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatgg-aaacagctcatgacatgtccataaaagttgttttcagcttttt 436  Q
    |||||| ||||| |||| | ||||||| ||||||||| |||||  || | |||||| ||||| || |||||||| ||||||  ||||||||||  || ||    
T  43142008 atttgagcttatctactaacataagcaattgtgaaacagtttgacagcgcttatgggaaacaacttatgacatgcccataa--gttgttttcattttatt 43141911  T
Q  437 tccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |||||||||| |  || | |||||||||||| | ||||||||    
T  43141910 tccataaactcttcaggatagcttatgaaaacatcttatagc 43141869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 7282999 - 7282950
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||||||||| |||||| |||||||||| |||||||||| | ||||||    
T  7282999 tgacttcattttttcttttcttataaaaatagcttatacataaacactta 7282950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 15119970 - 15119921
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    ||||||||||||| ||||||||||| |||  |||||||||| ||||||||    
T  15119970 tgacttcattttagcttttgttatagaaaaagcttatacataagcactta 15119921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 411
Target Start/End: Complemental strand, 15120319 - 15120246
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgt 411  Q
    |||||||||||| ||||   |||| || ||||||| |||||||| |||| ||||||||||| || |||||||||    
T  15120319 atttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgt 15120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 29430894 - 29430817
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccat 415  Q
    |||||| ||||| |||||| |||| ||||||||  ||| |||||||||  ||||| ||| |||| |||||||||||||    
T  29430894 atttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtccat 29430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 31461419 - 31461366
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||| |||| ||||||| || | ||||||||||    
T  31461419 tgactttattttatcttttgttatagaaatagcttatatataaccacttatatg 31461366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 38239640 - 38239689
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||| |||||||||||||||||| |||| |||||||||| | ||||||    
T  38239640 tgacttgattttatcttttgttatagaaatagcttatacataaacactta 38239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 41033047 - 41033088
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    ||||||||||||||||| |||| |||||||||| ||||||||    
T  41033047 ttttatcttttgttatagaaatagcttatacataagcactta 41033088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 1318352 - 1318296
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 414  Q
    |||||||||||||| ||||||||  |||| ||||| ||||| || ||||||||||||    
T  1318352 ataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtcca 1318296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 4026796 - 4026748
Alignment:
Q  488 acttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||| ||||||||||||| ||||||||| ||||||| || |||||||||    
T  4026796 actttattttatcttttgctataaaaatagcttatagataagcacttat 4026748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 6547290 - 6547250
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaaca 398  Q
    |||||||||||||| ||||||||  ||||||||||||||||    
T  6547290 ataagcacttgtgagactgtttgtgagagtttatggaaaca 6547250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 13864630 - 13864578
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||| |||||| ||||||||||| |||| |||||||||| | ||||||||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacacttatatg 13864578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 22878234 - 22878174
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 398  Q
    |||||| |||||  ||||| |||||||||||||| ||||||||| |||  |||||||||||    
T  22878234 atttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaaca 22878174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 526
Target Start/End: Complemental strand, 23747281 - 23747245
Alignment:
Q  490 ttcattttatcttttgttataaaaattgcttatacat 526  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  23747281 ttcattttatcttttgatataaaaatagcttatacat 23747245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 493 - 537
Target Start/End: Complemental strand, 28902051 - 28902007
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    |||||| ||| |||||||||||| |||||||||| ||||||||||    
T  28902051 attttaacttatgttataaaaatagcttatacataagcacttata 28902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 42420052 - 42419996
Alignment:
Q  421 ttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatag 477  Q
    ||||||||||||  ||||||||| || || || | ||||||||||||||||||||||    
T  42420052 ttgttttcagctcatttccataagctatccaggatagcttatgaaaatagcttatag 42419996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 432
Target Start/End: Original strand, 44606079 - 44606136
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagct 432  Q
    |||||||||||||  ||||| ||||| || |||||||||||||  |||||||||||||||    
T  44606079 actgtttggaagaacttatgaaaacaacttatgacatgtccat--aagttgttttcagct 44606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 7e-23; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 401 - 472
Target Start/End: Original strand, 30653371 - 30653442
Alignment:
Q  401 tcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 472  Q
    ||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  30653371 tcatgacatgttcataaaagctgttttcagcttatttccataagctgtctagaaaagcttatgaaaatagct 30653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 358 - 539
Target Start/End: Complemental strand, 10391458 - 10391281
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa-ctgtctagaaaa 456  Q
    |||| ||||||||| | |||||||||||||||||  |||||  | |||||||||| || |  |||||||||| ||| ||||| |||| || ||||| | |    
T  10391458 ataatcacttgtgagattgtttggaagagtttataaaaacactttatgacatgtctatta--gttgttttcaacttatttccttaaaactctctaggata 10391361  T
Q  457 gcttatgaaaatagcttatagcataagtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||| |  ||||||| ||  |||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||    
T  10391360 gcttataaaaacaaattatagctta--tatgactt-attttatcttttgttataaaaatagcttatacgtaagcacttatatg 10391281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 2880480 - 2880587
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgttt-ggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttt 436  Q
    |||||||||||| ||||||  |||| ||| |||||||||||| ||| ||| |||||||||||||| |||| |||| |||  ||| |||||||||||| ||    
T  2880480 atttgaacttatctactgagctaagtactagtgaaactgtttgggaggagcttatggaaacagctaatgatatgttcat--aaggtgttttcagcttatt 2880577  T
Q  437 tccataaact 446  Q
    ||||||||||    
T  2880578 tccataaact 2880587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 16380525 - 16380584
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    ||||| |||||||||||| |||| |||||||||||||||||||| | |||||||||||||    
T  16380525 ataagtacttgtgaaactatttgcaagagtttatggaaacagcttacgacatgtccataa 16380584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 478
Target Start/End: Complemental strand, 16889832 - 16889733
Alignment:
Q  377 tttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 476  Q
    |||||||||| ||||| |||||||| ||   ||||| ||||  ||||||||||| || |||||||||||| ||||| | |||||||||||| ||||||||    
T  16889832 tttggaagagattatgaaaacagcttatactatgtctataa--gttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttata 16889735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 476
Target Start/End: Original strand, 41957418 - 41957521
Alignment:
Q  371 aaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 470  Q
    ||||| |||||||||| ||| |||||||||| |||||||||||||  |||||||||||| ||| ||| |||||  | || || | |||||||||||| ||    
T  41957418 aaactatttggaagagcttacggaaacagcttatgacatgtccat--aagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacag 41957515  T
Q  471 cttata 476  Q
    ||||||    
T  41957516 cttata 41957521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 417
Target Start/End: Original strand, 38047815 - 38047892
Alignment:
Q  340 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||||| ||||  |||||| |||||||  ||||||||| |||| ||||||||||| || |||||||||||||||    
T  38047815 ttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataa 38047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 452
Target Start/End: Original strand, 28586720 - 28586812
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctag 452  Q
    ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||| ||| |  ||| |||||||||||| |||| |||| || |||||    
T  28586720 ataagcatttgtgaaactgtttgggagagcttatggaaatagcttatgacatatccgt--aagctgttttcagcttatttcgataagctctctag 28586812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 32172789 - 32172710
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||| ||||||||||   |||||||||||||| |  |||||| |||| ||||||||||| || |||||||||||||||    
T  32172789 atttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataa 32172710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 11457209 - 11457155
Alignment:
Q  363 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    ||||||||| ||||||| |||||| ||||||||||| || |||||||||||||||    
T  11457209 cacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataa 11457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 11684397 - 11684351
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  11684397 attttatattttgttataaaaatagcttatacattagcacttatatg 11684351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 7096216 - 7096269
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||| ||||    
T  7096216 tgactttattttatcttttgttatagaaatagcttatacataagcacttgtatg 7096269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 446
Target Start/End: Original strand, 11700332 - 11700418
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    |||||||||||||| ||| ||  | |||||||||||||||| || |||||||||||||  ||| ||||||||| || ||| ||||||||    
T  11700332 ataagcacttgtgagactattgaggagagtttatggaaacaacttatgacatgtccat--aagctgttttcagattattttcataaact 11700418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 20982224 - 20982277
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||| ||||||||| |||| |||||||||| ||||||||||||    
T  20982224 tgactttattttatcctttgttatagaaatagcttatacataagcacttatatg 20982277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 538
Target Start/End: Original strand, 3951887 - 3951935
Alignment:
Q  490 ttcattttatcttttgttataaaaattgcttatacatcagcacttatat 538  Q
    ||||||||||||||||||||| |||| |||||| ||| |||||||||||    
T  3951887 ttcattttatcttttgttatataaatagcttattcataagcacttatat 3951935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 499665 - 499771
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa-aagttgttttcagcttttt 436  Q
    |||||| ||||  |||||| |||||||| ||| |  |||||||| |||  ||||| |||||||| |||||||||   ||| |||||||||||||||| ||    
T  499665 atttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgt---taacaagttgttttcagcttatt 499761  T
Q  437 tccataaact 446  Q
    ||||||||||    
T  499762 tccataaact 499771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 433
Target Start/End: Original strand, 13264064 - 13264132
Alignment:
Q  363 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 433  Q
    |||||| || ||||||||||||||||||||||||||||| ||| ||| | |||  ||| ||||||||||||    
T  13264064 cacttgcgagactgtttggaagagtttatggaaacagcttatgccatattcat--aagctgttttcagctt 13264132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 1084081 - 1084127
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatg 392  Q
    |||| |||||| |||||||||||||||||||||||  ||||||||||    
T  1084081 ttatttactgacataagcacttgtgaaactgtttgagagagtttatg 1084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 13224403 - 13224357
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||||||||||||| |||| |||||||||| ||||||| ||||    
T  13224403 attttatcttttgttatagaaatagcttatacataagcacttctatg 13224357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 26516272 - 26516226
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||| || |||| |||||||||| ||||||||||||    
T  26516272 attttatcttttgttttagaaatagcttatacataagcacttatatg 26516226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 551
Target Start/End: Complemental strand, 29588854 - 29588796
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 551  Q
    ||||||| |||||||||| |||| |||||||||| |||||||||||  |||||| ||||    
T  29588854 attttatattttgttatagaaatagcttatacataagcacttatataaaaagtgtttat 29588796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 32191002 - 32190964
Alignment:
Q  363 cacttgtgaaactgtttggaagagtttatggaaacagct 401  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  32191002 cacttgttagactgtttggaagagtttatggaaacagct 32190964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 540
Target Start/End: Original strand, 35135751 - 35135805
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgt 540  Q
    |||||| |||||||||||||||||| ||||  ||||||||| | |||||||||||    
T  35135751 tgactttattttatcttttgttatagaaatatcttatacataaacacttatatgt 35135805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 36774677 - 36774744
Alignment:
Q  374 ctgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||||||||||| |||||||||| ||| |||||||||||   |||| || ||||||||| |||||||||    
T  36774677 ctgtttggaagagcttatggaaacggcttatgacatgtcc--taaagatggtttcagcttatttccataa 36774744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 11615489 - 11615452
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttata 523  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  11615489 tgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 24084879 - 24084826
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||    
T  24084879 tgacttgattttatcgtttatcataaaaatagcttatacatgagcacttatatg 24084826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 37063163 - 37063216
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||| |||| | |||||||| |||| |||||||    
T  37063163 tgactttattttatcttttgttatagaaatagtttatacataagcatttatatg 37063216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 551
Target Start/End: Original strand, 38819672 - 38819729
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 551  Q
    ||||||||||||||||| |||| || ||||||| ||| ||||||||  ||||||||||    
T  38819672 ttttatcttttgttatagaaatagcgtatacataagcccttatatgataagtgcttat 38819729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 8651328 - 8651424
Alignment:
Q  380 ggaagagtttatggaaacagctcat-gacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    ||||||| |||||||||||||| ||  ||||||||||  |||||||||||||| | ||||||||| ||  | |||| |||||||||||| || |||||||    
T  8651328 ggaagagcttatggaaacagcttataaacatgtccat--aagttgttttcagcatatttccataagct-cccagaatagcttatgaaaacagtttatagc 8651424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 10280547 - 10280635
Alignment:
Q  352 actgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||| ||||||||||||    ||||||| ||||  |||||||||||||| |||| ||||||||  |||||||| ||||||| |||||||||    
T  10280547 actgacataagcacttgttcggctgtttgaaagaacttatggaaacagcttatga-atgtccat--aagttgttatcagcttatttccataa 10280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 417
Target Start/End: Original strand, 11095436 - 11095508
Alignment:
Q  345 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    ||||| |||||| |||| ||||||||| | ||||||  |||  || ||||||||||| |||||||||||||||    
T  11095436 cttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataa 11095508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 11835256 - 11835208
Alignment:
Q  488 acttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||| ||||||||||||||||||||||| | |||||||| | |||||||    
T  11835256 actttattttatcttttgttataaaaatggtttatacataaacacttat 11835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 429
Target Start/End: Complemental strand, 34205377 - 34205288
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttca 429  Q
    |||||||||||| |||||| ||||||| || || |||| ||| | |||| ||||||||||| || ||| ||||| |||  ||||||||||||    
T  34205377 atttgaacttatttactgacataagcatttatggaactattttggagagcttatggaaacaacttatgtcatgttcat--aagttgttttca 34205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 443
Target Start/End: Complemental strand, 35963327 - 35963274
Alignment:
Q  388 ttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||||||| |||  |||||||||||||||  |||||||||||||| |||||||||    
T  35963327 ttatggaaatagcgtatgacatgtccataa--gttgttttcagcttatttccataa 35963274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 38036013 - 38036065
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatg 410  Q
    |||| ||||||||||||||||||| |||  |||||||| ||||| ||||||||    
T  38036013 ataaacacttgtgaaactgtttgggagaacttatggaaccagctaatgacatg 38036065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 538
Target Start/End: Complemental strand, 39128620 - 39128568
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatat 538  Q
    |||||| |||||||||||||||||| || | |||||||||| ||||| |||||    
T  39128620 tgactttattttatcttttgttatagaattagcttatacataagcacatatat 39128568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 443
Target Start/End: Complemental strand, 43115172 - 43115089
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    |||| ||||||||| | |||||||||||||||||||||||| || |||||||||||||  || ||||||||||||| |||||||||    
T  43115172 ataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccat--aacttgttttcagcttatttccataa 43115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 27016389 - 27016488
Alignment:
Q  343 aacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccata 442  Q
    ||||||| |||||| ||||| |||| ||| |||||||  |||||||||||||||||||||||||||| ||  || || ||||||||||||| ||||||||    
T  27016389 aacttatctactga-ataagtacttatgagactgtttcaaagagtttatggaaacagctcatgacatatc--tataacttgttttcagcttatttccata 27016485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 418
Target Start/End: Complemental strand, 24624344 - 24624266
Alignment:
Q  340 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||||||| |||| | || ||||||||| | |||||||||||||| ||||| |||||||| ||||||||||||||||    
T  24624344 ttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaa 24624266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 358 - 443
Target Start/End: Complemental strand, 37273250 - 37273167
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||||||| |||| ||||||||| |||| ||||||||||| || |||||||||||||  |||||||||||| ||| |||||||||    
T  37273250 ataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccat--aagttgttttcaacttatttccataa 37273167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 21872229 - 21872309
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||||| || || || ||| |||| ||||||||||||||||    
T  21872229 atttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaa 21872309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 22667539 - 22667477
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagc 400  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||  ||||||||||||||||||    
T  22667539 atttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagc 22667477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 22724178 - 22724116
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagc 400  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||  ||||||||||||||||||    
T  22724178 atttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagc 22724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 467
Target Start/End: Original strand, 30923835 - 30923959
Alignment:
Q  340 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcc 439  Q
    |||| ||||| || |||||||| ||||||||| |||||||   |||| | |||||||||||| |||||||||| ||||  | |||||||||||| ||||     
T  30923835 ttgagcttatttattgatataaacacttgtgagactgtttatgagagct-atggaaacagcttatgacatgtctataa--gctgttttcagcttatttct 30923931  T
Q  440 ataaactgtctagaaaagcttatgaaaa 467  Q
    ||||||| ||||| | || |||||||||    
T  30923932 ataaactctctaggataggttatgaaaa 30923959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 361 - 443
Target Start/End: Original strand, 11039296 - 11039376
Alignment:
Q  361 agcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    |||| |||||| |||||||| ||||| |||||||||||  | |||||||||||||  |||||||||||||||| | |||||||    
T  11039296 agcaattgtgagactgtttgaaagagcttatggaaacatattatgacatgtccat--aagttgttttcagcttatctccataa 11039376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 476
Target Start/End: Original strand, 1217767 - 1217870
Alignment:
Q  371 aaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 470  Q
    ||||| |||||||||| ||| |||||||||| |||||||||||||  |||||||||||| |||  || |||||  | || || | |||||||||||| ||    
T  1217767 aaactatttggaagagcttacggaaacagcttatgacatgtccat--aagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacag 1217864  T
Q  471 cttata 476  Q
    ||||||    
T  1217865 cttata 1217870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 539
Target Start/End: Original strand, 16790452 - 16790498
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  16790452 attttatctgttgttataaaaatagcttatacataagcacttatatg 16790498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 539
Target Start/End: Complemental strand, 38462339 - 38462209
Alignment:
Q  418 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgtta 508  Q
    |||||||||||||||| ||||||||| || ||| | | |||||||||||| || ||||||||||         ||| |||||| ||||||||||||| ||    
T  38462339 aagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggta 38462240  T
Q  509 taaaaattgcttatacatcagcacttatatg 539  Q
    || |||| ||||||| || | ||||||||||    
T  38462239 tagaaatagcttataaataaacacttatatg 38462209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 551
Target Start/End: Complemental strand, 49739541 - 49739483
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 551  Q
    ||||||||||||| | ||||||| |||||||||||| |||||||||| |||| ||||||    
T  49739541 attttatcttttgatgtaaaaatagcttatacatcaccacttatatgaaaagcgcttat 49739483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 20192695 - 20192744
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||||    
T  20192695 tgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 351 - 467
Target Start/End: Original strand, 39311626 - 39311740
Alignment:
Q  351 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 450  Q
    |||||| |||||||||||||| ||| ||| | |||| |||||||||||| | |||| || |||| |||  || |||||| ||| |||||||||||| ||     
T  39311626 tactgacataagcacttgtgagactattttggagagcttatggaaacagtttatgatatttccacaaa--tttttttcatcttatttccataaactctcc 39311723  T
Q  451 agaaaagcttatgaaaa 467  Q
    || | ||||||||||||    
T  39311724 agtatagcttatgaaaa 39311740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 41028940 - 41028993
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| ||||| |||||||||||| |||| |||||||||| ||||||||||||    
T  41028940 tgactttattttttcttttgttatagaaatagcttatacataagcacttatatg 41028993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 22232948 - 22232889
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    ||||||| |||||||||||||| || |||||||| |||||| || ||||||||||||||||    
T  22232948 ataagcatttgtgaaactgttttga-gagtttatagaaacaacttatgacatgtccataaa 22232889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 469
Target Start/End: Complemental strand, 26542653 - 26542544
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 457  Q
    ||||| |||||| | |||||||||||||| |||  |||||| || |||| ||||| ||||   ||||||||| ||| |||||||||||| || | || ||    
T  26542653 ataagtacttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataac--ttgttttcaacttatttccataaactctccataatag 26542556  T
Q  458 cttatgaaaata 469  Q
    ||||||||||||    
T  26542555 cttatgaaaata 26542544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 433
Target Start/End: Complemental strand, 41724348 - 41724255
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 433  Q
    |||||||||||| |||||| ||||| |||||| | || |||||  | |  ||||||||||| || |||||||||||||  ||||||||||||||||    
T  41724348 atttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccat--aagttgttttcagctt 41724255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 25964416 - 25964370
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||||||||||| |||||||||  || |||||||||    
T  25964416 attttatcttttgttataaaaatagcttatacaaaagaacttatatg 25964370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 412
Target Start/End: Complemental strand, 28801361 - 28801327
Alignment:
Q  378 ttggaagagtttatggaaacagctcatgacatgtc 412  Q
    |||| ||||||||||||||||||||||||||||||    
T  28801361 ttgggagagtttatggaaacagctcatgacatgtc 28801327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 467
Target Start/End: Original strand, 36646340 - 36646443
Alignment:
Q  362 gcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagctta 461  Q
    |||||||| | ||| ||||| |||| ||||||||||  || ||| |||||||||||  | |||||||| ||| |||| ||||||| ||||| | ||||||    
T  36646340 gcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataa--gctgttttcatcttatttctataaactctctaggatagctta 36646437  T
Q  462 tgaaaa 467  Q
    ||||||    
T  36646438 tgaaaa 36646443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 443
Target Start/End: Complemental strand, 42745154 - 42745071
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    |||||||||||||| | | ||| ||||| |||||| ||||| || ||||||||| |||  |||||||||||| ||| |||||||||    
T  42745154 ataagcacttgtgatattatttagaagaatttatgtaaacaacttatgacatgttcat--aagttgttttcatcttatttccataa 42745071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 474
Target Start/End: Original strand, 54837003 - 54837102
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 472  Q
    ||||||||||||| |||||| |||||||| ||||||||| |||  || |||||||| |||| |||  |||| ||||| |  | |||||||||||||| ||    
T  54837003 actgtttggaagaatttatgaaaacagcttatgacatgttcat--aacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataact 54837100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 905059 - 905112
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||| |||| |||||||| | ||| ||||||||    
T  905059 tgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatg 905112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 20194987 - 20195065
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 438  Q
    ||||||| |||||| ||||||||  |||| ||||| |||||| | ||||||| | ||  ||||||||||||||||||||||    
T  20194987 ataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacatattca--aaagttgttttcagcttttttc 20195065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 24158457 - 24158510
Alignment:
Q  345 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 398  Q
    ||||| |||||| ||||| |||||||||||||||||  |||| |||||||||||    
T  24158457 cttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaaca 24158510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 446
Target Start/End: Original strand, 27290871 - 27290941
Alignment:
Q  374 ctgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    |||||| |||||| ||||| |||||||| |||||||| ||||||  | |||||||||||| ||||||| ||||    
T  27290871 ctgtttcgaagagcttatgaaaacagcttatgacatgcccataa--gctgttttcagcttatttccatgaact 27290941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 526
Target Start/End: Original strand, 30669066 - 30669099
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacat 526  Q
    ||||||||||||||||||||||| ||||||||||    
T  30669066 attttatcttttgttataaaaatagcttatacat 30669099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 537
Target Start/End: Complemental strand, 31364880 - 31364831
Alignment:
Q  488 acttcattttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    |||| |||||| |||||||||||||||| ||||||| || ||||||||||    
T  31364880 actttattttaccttttgttataaaaatagcttatatattagcacttata 31364831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 441
Target Start/End: Complemental strand, 36200209 - 36200131
Alignment:
Q  361 agcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccat 441  Q
    ||||||||||| | |||| |  ||||||| || ||||| || |||||||||||||  |||||||||||||||| |||||||    
T  36200209 agcacttgtgagaatgttggagagagtttttgtaaacaacttatgacatgtccat--aagttgttttcagcttatttccat 36200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 433
Target Start/End: Original strand, 42817156 - 42817249
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaac-tgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 433  Q
    |||||||||||| |||||   |||| ||||||||| | ||||||  |||| |||||||||||||  |||||||||||||  ||||||||||||||||    
T  42817156 atttgaacttatctactggcgtaag-acttgtgaagcctgtttgagagagcttatggaaacagcatatgacatgtccat--aagttgttttcagctt 42817249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 44374733 - 44374786
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||| | | || |||||||||| ||||||||||||    
T  44374733 tgactttattttatcttttgttaaagatatagcttatacataagcacttatatg 44374786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 49546576 - 49546625
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||| |||||||||||||||||||||||  |||| |||| ||||||||    
T  49546576 tgactttattttatcttttgttataaaaatatcttacacataagcactta 49546625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 534
Target Start/End: Original strand, 52413221 - 52413258
Alignment:
Q  497 tatcttttgttataaaaattgcttatacatcagcactt 534  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  52413221 tatcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 526
Target Start/End: Complemental strand, 1395652 - 1395612
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacat 526  Q
    |||||| |||||||||||||||||| |||| ||||||||||    
T  1395652 tgactttattttatcttttgttatagaaatagcttatacat 1395612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 8933915 - 8933847
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 414  Q
    ||||||||||  |||||||  ||||| ||||||||| |||| ||| ||||| |||| ||||||||||||    
T  8933915 ttatatactggaataagcatgtgtgagactgtttgggagagattaaggaaatagcttatgacatgtcca 8933847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 537
Target Start/End: Complemental strand, 22667403 - 22667355
Alignment:
Q  489 cttcattttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    |||||||||||||||||||||| || | ||||| |||| ||||||||||    
T  22667403 cttcattttatcttttgttatagaagtagcttaaacataagcacttata 22667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 537
Target Start/End: Complemental strand, 22724042 - 22723994
Alignment:
Q  489 cttcattttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    |||||||||||||||||||||| || | ||||| |||| ||||||||||    
T  22724042 cttcattttatcttttgttatagaagtagcttaaacataagcacttata 22723994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 526
Target Start/End: Original strand, 32555070 - 32555110
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacat 526  Q
    |||||| ||||||||||||||| ||| ||||||||||||||    
T  32555070 tgactttattttatcttttgttgtaataattgcttatacat 32555110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 478
Target Start/End: Original strand, 34254775 - 34254880
Alignment:
Q  371 aaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 470  Q
    ||||||||||||| || ||||| |||||| | ||||||| |||||||  | |  ||||||||| ||| |||||  | || |||| |||||||||||||||    
T  34254775 aaactgtttggaaaagcttatgaaaacagtttatgacatatccataa--gctactttcagcttatttacataagttctccagaatagcttatgaaaatag 34254872  T
Q  471 cttatagc 478  Q
     |||||||    
T  34254873 tttatagc 34254880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 346 - 478
Target Start/End: Original strand, 39551151 - 39551281
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 445  Q
    |||| ||| |||||||||| |||||||||||||||| ||| |||||||||||| || |||||||||||  ||||| |||||| | ||| |||  |||| |    
T  39551151 ttatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtcc--aaaagctgtttttaacttatttttataagc 39551248  T
Q  446 tgtctagaaaagcttatgaaaatagcttatagc 478  Q
    | || || |||||||||||||| | ||||||||    
T  39551249 tctccaggaaagcttatgaaaacaacttatagc 39551281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 30191095 - 30191212
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 457  Q
    |||||||||||| | ||||||||| |||| ||||||||||| || ||||||||| |  |||| ||||||||||||| |||||||||||  |  || | ||    
T  30191095 ataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttc--aaaacttgttttcagcttatttccataaacatttcaggatag 30191192  T
Q  458 cttatgaaaatagcttatag 477  Q
    ||||| ||||||||||||||    
T  30191193 cttatcaaaatagcttatag 30191212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 358 - 443
Target Start/End: Original strand, 13000378 - 13000461
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    |||||||||||||| ||| |||| |||||||||||| |||| || |||||||||||  | |||||||||||||||| |||||||||    
T  13000378 ataagcacttgtgagactatttgcaagagtttatggtaacaacttatgacatgtcc--acaagttgttttcagcttatttccataa 13000461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 414
Target Start/End: Complemental strand, 26410402 - 26410340
Alignment:
Q  352 actgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 414  Q
    ||||| |||||||||| ||| |||| |||| |||| |||||||||||||||||||||||||||    
T  26410402 actgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtcca 26410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 418 - 476
Target Start/End: Original strand, 30277257 - 30277315
Alignment:
Q  418 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 476  Q
    |||||||||||||||| |||||||||||| ||||| | |||||||||||| ||||||||    
T  30277257 aagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 375 - 467
Target Start/End: Complemental strand, 10722723 - 10722633
Alignment:
Q  375 tgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaa 467  Q
    ||||||| ||| ||||||||||||||| ||||||| |||||  | |||||||| ||||| ||||||| | || ||||||| ||||||||||||    
T  10722723 tgtttgggagaatttatggaaacagcttatgacatctccat--aggttgtttttagcttatttccatcagctctctagaacagcttatgaaaa 10722633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 28769293 - 28769411
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 457  Q
    |||||||||||||| | | ||||  |||| || || ||| |||  |||| ||||||||||  |||||||||||||| |||||||||||| || | || ||    
T  28769293 ataagcacttgtgagattatttgagagagcttgtgtaaatagcatatgatatgtccataa--gttgttttcagcttatttccataaactctccaaaatag 28769390  T
Q  458 cttatgaaaatagcttatagc 478  Q
    |||||||||| ||||||||||    
T  28769391 cttatgaaaacagcttatagc 28769411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 476
Target Start/End: Original strand, 11569411 - 11569527
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 457  Q
    |||| ||||||||| |||||||   |||| |||||||||||||| ||||||||| |||  |||||||||||||||| ||| || || || || |  | ||    
T  11569411 ataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacat--aagttgttttcagcttattttcaaaatctctccatgatag 11569508  T
Q  458 cttatgaaaatagcttata 476  Q
    |||||||||| ||||||||    
T  11569509 cttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 2364394 - 2364455
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacag 399  Q
    |||||||||||| | |||| ||||| |||||||| |||||||||||||| ||||| ||||||    
T  2364394 atttgaacttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 2364455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 478
Target Start/End: Complemental strand, 8062421 - 8062327
Alignment:
Q  382 aagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |||||||||||||||||| | |  || ||||||||| |  |||||||||||| ||||||||| || ||||  | |||||||||||| ||||||||||    
T  8062421 aagagtttatggaaacagtttacaacgtgtccataaga--tgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagc 8062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 504
Target Start/End: Original strand, 10079082 - 10079170
Alignment:
Q  418 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcata--agtatgacttcattttatctttt 504  Q
    |||||||||| ||||| |||||||||||| || |||| |||| ||||||| ||||||||  | |  ||| |||||||||||||||||||    
T  10079082 aagttgttttaagcttctttccataaactttccagaatagctcatgaaaacagcttatacgaaaacagtttgacttcattttatctttt 10079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 14482183 - 14482130
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||| |||| | |||||||| ||||||||||||    
T  14482183 tgactttattttatcttttgttatagaaatagtttatacataagcacttatatg 14482130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 24326167 - 24326106
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacag 399  Q
    |||||| ||||| |||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaacag 24326106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 25869240 - 25869306
Alignment:
Q  378 ttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    |||| ||||| |||||||| | || |||||||||||||||  |||||||||||||| ||||||||||||    
T  25869240 ttgggagagtctatggaaataacttatgacatgtccataa--gttgttttcagcttatttccataaact 25869306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 478
Target Start/End: Complemental strand, 30389215 - 30389097
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 457  Q
    ||||| ||| |||| ||||||||  ||||  |||| ||| |||| ||||||||| |||||  |||||||||||||| ||| |||||  | ||||| ||||    
T  30389215 ataagtactcgtgacactgtttgagagagcatatgaaaatagctaatgacatgttcataa--gttgttttcagcttattttcataagttctctaggaaag 30389118  T
Q  458 cttatgaaaatagcttatagc 478  Q
    |||||||||| ||| ||||||    
T  30389117 cttatgaaaacagcgtatagc 30389097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 9540967 - 9541060
Alignment:
Q  375 tgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 470  Q
    ||||||| |||| ||||||||||| || |||||||||||||  || |||| |||||||| ||| || || || ||||| | |||||||||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtccat--aatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaatag 9541060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 476
Target Start/End: Complemental strand, 11415283 - 11415154
Alignment:
Q  345 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa 444  Q
    ||||| |||| | ||||| |||||||| | |||||   ||||||||||||||||||| || ||||||||||  ||| | || ||||||| ||| || |||    
T  11415283 cttatttactaacataagtacttgtgagattgttttagagagtttatggaaacagcttataacatgtccat--aagctattctcagcttattttcacaaa 11415186  T
Q  445 ctgtctagaaaagcttatgaaaatagcttata 476  Q
    || ||||| | |||||||||||| ||| ||||    
T  11415185 ctctctaggatagcttatgaaaacagcgtata 11415154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 478
Target Start/End: Complemental strand, 12361330 - 12361190
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagag--tttatggaaacagctcatgacatgtccataaaagttgttttcagctttt 435  Q
    |||||||||||| |||||||||||| |||||| | ||| ||||  ||||   |||| |||| |||| |||||||||||||  ||| |||||||| ||| |    
T  12361330 atttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccat--aagctgttttcaacttat 12361233  T
Q  436 ttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |||||| | || ||  ||| | |||||||||| ||||||||||    
T  12361232 ttccattagctctcctgaataacttatgaaaacagcttatagc 12361190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 422 - 478
Target Start/End: Complemental strand, 31705139 - 31705083
Alignment:
Q  422 tgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |||||||||||| |||||||||||| || || | |||||||||||| ||||||||||    
T  31705139 tgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagc 31705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 439
Target Start/End: Original strand, 4055577 - 4055649
Alignment:
Q  365 cttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcc 439  Q
    ||||| ||||||||||| ||||||||| |||| | || ||||||||||||||||   |||||||||||| |||||    
T  4055577 cttgtaaaactgtttgggagagtttatagaaataacttatgacatgtccataaa--ctgttttcagcttatttcc 4055649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 560
Target Start/End: Original strand, 8823490 - 8823557
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcacttatatg-taaagtgcttatcttataagt 560  Q
    ||||||||||||||||| |||| ||||||| || |||||||| ||| ||||| ||||||| |||||||    
T  8823490 ttttatcttttgttatagaaatggcttatatataagcacttaaatgataaagagcttatcatataagt 8823557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 409
Target Start/End: Original strand, 9562228 - 9562267
Alignment:
Q  370 gaaactgtttggaagagtttatggaaacagctcatgacat 409  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  9562228 gaaactgtttggaagagcttatgaaaacagctcatgacat 9562267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 29169890 - 29169949
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||||||||||| ||||||| |||| ||||| |||||||  ||||||| |||||||    
T  29169890 ataagcacttgtgaaattgtttgggagagcttatgaaaacagcatatgacatatccataa 29169949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 452
Target Start/End: Original strand, 41606857 - 41606949
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctag 452  Q
    ||||||| ||||||||| |||||| |||   || | |||||||| ||||||||| ||  ||||||||||||||||| ||||||||| || |||||    
T  41606857 ataagcatttgtgaaacagtttgggagaaactacgaaaacagcttatgacatgttca--aaagttgttttcagcttatttccataagctctctag 41606949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 468
Target Start/End: Complemental strand, 26479895 - 26479793
Alignment:
Q  364 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatg 463  Q
    |||||||||||| ||||  |||| ||||||||||| || ||| ||||||  || ||||| |||||||| | ||||||||| || || |||| || |||||    
T  26479895 acttgtgaaactatttgcgagagcttatggaaacaacttatgtcatgtc--tataagtttttttcagcgtatttccataagctctccagaataggttatg 26479798  T
Q  464 aaaat 468  Q
    |||||    
T  26479797 aaaat 26479793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 415
Target Start/End: Complemental strand, 34770984 - 34770927
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccat 415  Q
    |||||||||||||||||||||||  |||   |||| |||||||| |||||||||||||    
T  34770984 ataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgtccat 34770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 473
Target Start/End: Original strand, 39268522 - 39268571
Alignment:
Q  424 ttttcagcttttttccataaactgtctagaaaagcttatgaaaatagctt 473  Q
    ||||||| || ||||||||| || |||||||||||||||||||| |||||    
T  39268522 ttttcagtttatttccataagctctctagaaaagcttatgaaaacagctt 39268571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 40356852 - 40356799
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||| ||||| |||| ||||||| || ||||||||||||    
T  40356852 tgactttattttatcttttattatataaatagcttatagataagcacttatatg 40356799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 537
Target Start/End: Complemental strand, 42597380 - 42597331
Alignment:
Q  488 acttcattttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    |||| |||||||||||||||||| |||| |||||||||| || |||||||    
T  42597380 actttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 778525 - 778465
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 398  Q
    ||||| |||||| |||||| |||||||||||||| |||||||| ||||  ||||| |||||    
T  778525 atttgtacttatttactgaaataagcacttgtgagactgtttgcaagaacttatgaaaaca 778465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 5226582 - 5226530
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||| |||||||||||||||||  |||||| |||||||| | ||||||||||    
T  5226582 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatg 5226530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 493 - 537
Target Start/End: Original strand, 11569555 - 11569599
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    ||||||||||||||||||||||| |  ||| ||||||||||||||    
T  11569555 attttatcttttgttataaaaatagactatgcatcagcacttata 11569599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 26215475 - 26215427
Alignment:
Q  488 acttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||| |||||||||||||||||| |||| |||||||||| ||| |||||    
T  26215475 actttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 526
Target Start/End: Original strand, 34080355 - 34080395
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacat 526  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  34080355 tgacttcattttatcttttgttaaagaaatagcttatacat 34080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 37353109 - 37353153
Alignment:
Q  341 tgaacttatatactgatataagcacttgtgaaactgtttggaaga 385  Q
    ||||| ||| |||||| |||||||||||||| |||||||||||||    
T  37353109 tgaacctatctactgacataagcacttgtgagactgtttggaaga 37353153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 39881655 - 39881735
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||||||||| || ||  |||| ||||||||| | |||||||||||| || || ||| |||| ||||||||| ||||||    
T  39881655 atttgaacttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgttcataaa 39881735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 446
Target Start/End: Original strand, 42370324 - 42370401
Alignment:
Q  367 tgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    ||||||||||||||| | |||||||| ||| |||  ||||||||||  || ||  |||||||||||| ||||||||||||    
T  42370324 tgtgaaactgtttgggaaagtttatgaaaatagcgtatgacatgtc--tacaaactgttttcagcttatttccataaact 42370401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 6e-17; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 339 - 443
Target Start/End: Complemental strand, 39345606 - 39345504
Alignment:
Q  339 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 438  Q
    ||||||||||| |||||  ||||  |||||||| ||||||||| |||||| |||||||||| | |||||||||||||  |||||| ||||||||| ||||    
T  39345606 tttgaacttatctactggaataattacttgtgagactgtttggtagagttcatggaaacagtttatgacatgtccat--aagttgctttcagcttatttc 39345509  T
Q  439 cataa 443  Q
    |||||    
T  39345508 cataa 39345504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 48157054 - 48157157
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||| ||||||| |||||| |||||| ||||||||| |||| |||| |||||| || ||| |||||||||  ||| |||||||||||| |||    
T  48157054 atttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccat--aagctgttttcagcttattt 48157151  T
Q  438 ccataa 443  Q
    ||||||    
T  48157152 ccataa 48157157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 446
Target Start/End: Complemental strand, 33894743 - 33894657
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    |||||||||||||| ||||||||  |||| ||||| |||||||  |||||||||||||  |||||||||||||||| |||| |||||||    
T  33894743 ataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccat--aagttgttttcagcttatttcaataaact 33894657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 515
Target Start/End: Original strand, 46281076 - 46281249
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||||||||| |||| | |||| ||||| |||   |||||| ||||||||| ||||||| || ||| |||||| |||||  ||||||||||||| |||    
T  46281076 atttgaacttatctactaacataaacacttttgag--tgtttgaaagagtttacggaaacaacttatgccatgtctataaa--ttgttttcagcttattt 46281171  T
Q  438 ccataaactgtctagaaaagcttatgaaaatagcttatagcataagtatgacttcattttatcttttgttataaaaat 515  Q
      |||| |  || |||| ||||||| |||| |||||||||| ||  | |||||| ||||||| |||||||||| ||||    
T  46281172 atataagccctccagaatagcttataaaaacagcttatagcctatatttgactttattttattttttgttatagaaat 46281249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 339 - 476
Target Start/End: Complemental strand, 39334328 - 39334193
Alignment:
Q  339 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 438  Q
    ||||||||||| |||||  ||||  ||| |||| ||||||||| ||||||||||||||||  | |||||||||||||  ||||||  |||||||| ||||    
T  39334328 tttgaacttatctactggaataattactcgtgagactgtttggtagagtttatggaaacaatttatgacatgtccat--aagttgcattcagcttatttc 39334231  T
Q  439 cataaactgtctagaaaagcttatgaaaatagcttata 476  Q
    ||||| ||  | || | ||||| |||||| ||||||||    
T  39334230 cataagctcgccaggatagcttttgaaaacagcttata 39334193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 12834915 - 12834976
Alignment:
Q  357 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    ||||||||||| ||| |||| |||| |||| |||||||||||||| ||||||||||||||||    
T  12834915 tataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaa 12834976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 539
Target Start/End: Original strand, 3610674 - 3610882
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||| |||||   ||| ||||||||| ||| ||||| | |  |||||||||||||| |||||||||||||||   ||  ||||||||| |||    
T  3610674 atttgagcttatctactggcctaaccacttgtgatactttttgggaaaccttatggaaacagctaatgacatgtccataagcctt--tttcagcttattt 3610771  T
Q  438 ccataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgttataaaaattgcttatacatca 528  Q
    | |||| || ||||| | || ||| ||||| | |||||||| ||         ||| || ||||||||||||||||||| || |||| |||||||||| |    
T  3610772 ctataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataa 3610871  T
Q  529 gcacttatatg 539  Q
    |||||||||||    
T  3610872 gcacttatatg 3610882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 443
Target Start/End: Complemental strand, 20553219 - 20553136
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    |||||||||||||| ||||||  | |||| |||||||||||||| | ||||||| |||  ||||||||||||| || |||||||||    
T  20553219 ataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcat--aagttgttttcagattatttccataa 20553136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 5276205 - 5276156
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||| || |||||||||||||||||||| |||||||||| ||||||||    
T  5276205 tgactttatgttatcttttgttataaaaatagcttatacataagcactta 5276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 12234825 - 12234951
Alignment:
Q  340 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcc 439  Q
    |||| ||||| |||||  || ||||| ||||| |||| |||||| || |||| |||||| || |||||||||| ||||  | |||||||||||| |||||    
T  12234825 ttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataa--gctgttttcagcttatttcc 12234922  T
Q  440 ataaactgtctagaaaagcttatgaaaat 468  Q
    |||| || ||||| |||||| || |||||    
T  12234923 ataagctctctaggaaagctcataaaaat 12234951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 36598290 - 36598388
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||||||||  |||||| ||||||| |||||| | ||||||  |||| ||||||||||| || ||||||||| |||  ||| |||||||||||| |||    
T  36598290 atttgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcat--aagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 339 - 443
Target Start/End: Complemental strand, 39360158 - 39360056
Alignment:
Q  339 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 438  Q
    ||||||||||| |||||  ||||  ||| |||| ||||||||  |||||||||||||||| || ||||||| |||||  |||||| ||||||||| ||||    
T  39360158 tttgaacttatctactggaataattactcgtgagactgtttgatagagtttatggaaacaacttatgacatatccat--aagttgctttcagcttatttc 39360061  T
Q  439 cataa 443  Q
     ||||    
T  39360060 aataa 39360056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 418
Target Start/End: Complemental strand, 30751655 - 30751575
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||| ||||||| |||||| |||||||||||||  ||||||||| |||| |||| ||||||| | ||  ||||||||||||    
T  30751655 atttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaaacagtttatagcatgtccataaa 30751575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 476
Target Start/End: Complemental strand, 3468746 - 3468614
Alignment:
Q  342 gaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccat 441  Q
    |||||||| |||| | |||| ||||| ||| ||||||| | ||||||  |||||||| || |||||||||||||  ||||||||| || ||| ||||||     
T  3468746 gaacttatctactaaaataaacacttttgagactgtttcggagagttgttggaaacaactaatgacatgtccat--aagttgtttccaacttatttccac 3468649  T
Q  442 aaactgtctagaaaagcttatgaaaatagcttata 476  Q
    ||  | ||||| | || ||||||||| ||||||||    
T  3468648 aagttctctaggatagattatgaaaaaagcttata 3468614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 27121528 - 27121599
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacat 409  Q
    |||||| ||||| |||| |||||||||  ||||| | ||||||| |||||||||||||| |||| |||||||    
T  27121528 atttgagcttatttactaatataagcatctgtgagattgtttgggagagtttatggaaatagcttatgacat 27121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 7453351 - 7453409
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccata 416  Q
    |||||||||||||||||||||||  ||||  |||||||||| || || |||||||||||    
T  7453351 ataagcacttgtgaaactgtttgagagagcatatggaaacatcttattacatgtccata 7453409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 7513608 - 7513562
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  7513608 attttatcttttgtcttaaaaatagcttatacataagcacttatatg 7513562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 8445260 - 8445214
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  8445260 attttatcttttgttataaaaatagcttataaacaagcacttatatg 8445214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 24973918 - 24973872
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||||||||||||| |||| |||| ||||| ||||||||||||    
T  24973918 attttatcttttgttatagaaatagcttttacataagcacttatatg 24973872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 24975878 - 24975832
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||||||||||||| || | | |||||||||||||||||||||    
T  24975878 attttatcttttgttatagaagtagattatacatcagcacttatatg 24975832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 526
Target Start/End: Complemental strand, 28178952 - 28178910
Alignment:
Q  484 tatgacttcattttatcttttgttataaaaattgcttatacat 526  Q
    |||||||| |||||||||||||||||| |||| ||||||||||    
T  28178952 tatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 29574584 - 29574638
Alignment:
Q  363 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    ||||||||| ||||||| | |||  |||||||||||||| |||||||||||||||    
T  29574584 cacttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccataa 29574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 30134030 - 30133980
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||||| ||||||||||||||| ||||||| |||||||||| | |||||||    
T  30134030 tgactttattttatcttttgttgtaaaaatagcttatacataaacacttat 30133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 535
Target Start/End: Complemental strand, 33894597 - 33894555
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||||||||||||||||| |||| |||||||||| ||||||||    
T  33894597 attttatcttttgttatagaaatagcttatacataagcactta 33894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 478
Target Start/End: Original strand, 39551526 - 39551620
Alignment:
Q  382 aagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgt-ctagaaaagcttatgaaaatagcttatagc 478  Q
    ||||| ||||||||||| || |||||||||||||  ||| |||| ||||||| ||||||||| || | ||||| ||| |||||||||||| |||||||    
T  39551526 aagaggttatggaaacaacttatgacatgtccat--aaggtgttgtcagcttatttccataagctttcctagagaag-ttatgaaaatagattatagc 39551620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 539
Target Start/End: Complemental strand, 45078259 - 45078221
Alignment:
Q  501 ttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  45078259 ttttgttataaaaatagcttatacataagcacttatatg 45078221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 462
Target Start/End: Complemental strand, 1710865 - 1710744
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||| |||| | |||| | ||||||| |||||||| || |||||| | |||||||| |  |||| ||||||||   |||||||||||| |||    
T  1710865 atttgagcttatctactaacataatcccttgtgacactgtttgaaa-agtttaagaaaacagcttacaacatctccataaac--tgttttcagcttattt 1710769  T
Q  438 ccataaactgtctagaaaagcttat 462  Q
    |||||| || ||||||| |||||||    
T  1710768 ccataacctctctagaatagcttat 1710744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 539
Target Start/End: Complemental strand, 7244675 - 7244630
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||||||| |||| |||| |||||||||| ||||||||||||    
T  7244675 ttttatcttttgatatagaaatagcttatacataagcacttatatg 7244630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 559
Target Start/End: Original strand, 22388001 - 22388066
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataag 559  Q
    ||||||||||||||||| |||| |||||| ||| |||||||| |||  ||||| |||| |||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataag 22388066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 476
Target Start/End: Original strand, 24363601 - 24363671
Alignment:
Q  404 tgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 476  Q
    ||||||||||||||  |||||||||||||| ||||||||| || || || | |||||||||||| | ||||||    
T  24363601 tgacatgtccataa--gttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttata 24363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 536
Target Start/End: Original strand, 25670687 - 25670724
Alignment:
Q  499 tcttttgttataaaaattgcttatacatcagcacttat 536  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  25670687 tcttttgttataaaaatagcttatacataagcacttat 25670724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 27517265 - 27517318
Alignment:
Q  364 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||| ||||||||  |||||||||||||||  ||||| ||||||||||||    
T  27517265 acttgtgagactgtttgagagagtttatggaaaccactcataacatgtccataa 27517318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 28165072 - 28165023
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    ||||||||||||||||||||||||| |||   ||||||||| ||||||||    
T  28165072 tgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Complemental strand, 31341175 - 31341130
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagca 531  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||    
T  31341175 tgactttattttatcttttgttatacaaatagcttatacataagca 31341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 41040293 - 41040224
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccat 415  Q
    |||| |||||||||||| | ||||||  || ||| |||||| |||||||||||||| ||||||| |||||    
T  41040293 ttatctactgatataagtatttgtgaggctctttagaagagcttatggaaacagcttatgacatatccat 41040224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 535
Target Start/End: Complemental strand, 5373205 - 5373157
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    ||||| |||||||||||||||||| |||| || ||||||| ||||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataagcactta 5373157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 27496387 - 27496447
Alignment:
Q  383 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    |||| ||| ||||||| ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  27496387 agagcttaaggaaaca-ctcatgacatgtccataa--gctgttttcagcttatttccataaact 27496447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 27503045 - 27503105
Alignment:
Q  383 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    |||| ||| ||||||| ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  27503045 agagcttaaggaaaca-ctcatgacatgtccataa--gctgttttcagcttatttccataaact 27503105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 538
Target Start/End: Original strand, 28340933 - 28340985
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatat 538  Q
    ||||||||||| ||||||| |||||||||| || |||| || |||||||||||    
T  28340933 tgacttcatttcatcttttattataaaaatagcatatagataagcacttatat 28340985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 526
Target Start/End: Original strand, 28613631 - 28613663
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacat 526  Q
    |||||||||||||||||||||| ||||||||||    
T  28613631 ttttatcttttgttataaaaatagcttatacat 28613663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 478
Target Start/End: Original strand, 33645920 - 33646032
Alignment:
Q  364 acttgtgaaactgtttgga-agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttat 462  Q
    |||||||| |||| ||||| |||| ||||||||||| || ||||||||||  || |||||||||| || || ||||||||| || || || | |||||||    
T  33645920 acttgtgagactggttggagagagcttatggaaacaacttatgacatgtc--tataagttgtttttaggttatttccataagctctccag-atagcttat 33646016  T
Q  463 gaaaatagcttatagc 478  Q
    ||||| || |||||||    
T  33646017 gaaaacagtttatagc 33646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 40009592 - 40009544
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatga 406  Q
    |||||||||||||||||||||||| ||| |||||| ||| |||| ||||    
T  40009592 ataagcacttgtgaaactgtttggtagaatttatgaaaatagcttatga 40009544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 443
Target Start/End: Original strand, 45859488 - 45859563
Alignment:
Q  365 cttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||||| |||||||||||||| ||| ||||||| |  ||||||||| |||   ||||||||||||||| |||| ||||    
T  45859488 cttgtgagactgtttggaagagcttacggaaacaacatatgacatgttcat---agttgttttcagcttatttctataa 45859563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 46213783 - 46213731
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||| ||||||| |||||||||| |||| |||| ||||| ||||||||||||    
T  46213783 gactttattttatattttgttatagaaatagcttttacataagcacttatatg 46213731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 475
Target Start/End: Original strand, 10199342 - 10199477
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||| |||| | |||||||||||||| ||| ||||| |||  | ||| ||| |||| ||||||||| |||||  |||||||||||||| |||    
T  10199342 atttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataa--gttgttttcagcttattt 10199439  T
Q  438 ccataaactgtctagaaaagcttatgaaaatagcttat 475  Q
     ||||| || |||| || |||||||||||| |||||||    
T  10199440 tcataagctctctaaaatagcttatgaaaaaagcttat 10199477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 12564433 - 12564536
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||||||||||||||||||||||||  ||||||||| |||| ||| | | | |||| |||||| ||| ||  |||||||||||||||| |||    
T  12564433 atttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaat--aagttgttttcagcttattt 12564530  T
Q  438 ccataa 443  Q
    ||||||    
T  12564531 ccataa 12564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 6279522 - 6279405
Alignment:
Q  351 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 450  Q
    |||||| |||||||||||||   |||||||  |||| |||||||||||| | |  ||||||||||||  |||||||||||| | ||||||||| || |||    
T  6279522 tactgacataagcacttgtgtggctgtttgagagagcttatggaaacagttaaccacatgtccataa--gttgttttcagcgtatttccataagctctct 6279425  T
Q  451 agaaaagcttatgaaaatag 470  Q
    || | |||||||||||||||    
T  6279424 aggatagcttatgaaaatag 6279405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 23373247 - 23373323
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 414  Q
    |||||||||| | ||||||||||||||||||||| | ||||||| |||| |||| |||||| || ||||||||||||    
T  23373247 atttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca 23373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 478
Target Start/End: Complemental strand, 15581383 - 15581252
Alignment:
Q  345 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa 444  Q
    ||||| |||||| |||||||||||||| | |||||||||||| | ||||||||| || ||||||||||  || ||| |||||||||| | |||| ||||     
T  15581383 cttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtc--tataagctgttttcagcctatttctataag 15581286  T
Q  445 ctgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |  ||||| | | ||||| |||| ||||||||||    
T  15581285 ccctctagcataccttataaaaaaagcttatagc 15581252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 871026 - 870973
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| ||||||||||||||||||||||| | |||||||| ||||||||||||    
T  871026 tgacttaattttatcttttgttataaaaatagtttatacataagcacttatatg 870973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 429
Target Start/End: Original strand, 32515395 - 32515464
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttca 429  Q
    |||||||||||||| ||||||||| |||| |||||||||||||  |||||||||| ||  ||||||||||||    
T  32515395 ataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaat--aagttgttttca 32515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 354 - 448
Target Start/End: Original strand, 3597231 - 3597323
Alignment:
Q  354 tgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgt 448  Q
    |||||||| ||||||||| |||||||||||||||| ||  ||| | || |||||||| ||||  ||| | |||||||||| ||||||||||||||    
T  3597231 tgatataaccacttgtgagactgtttggaagagttgataaaaataacttatgacatggccat--aagctattttcagcttatttccataaactgt 3597323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 6933050 - 6933100
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||||| ||||||| ||||||||||||||| |||||||||| |||||||||    
T  6933050 tgactttattttatgttttgttataaaaatggcttatacatgagcacttat 6933100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 446
Target Start/End: Complemental strand, 15579583 - 15579512
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 446  Q
    ||||||||| |||| || |||||||| || |||||||||||||  |||||||| ||||||| ||||||||||||    
T  15579583 actgtttgggagagcttgtggaaacaacttatgacatgtccat--aagttgttctcagcttatttccataaact 15579512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 27140569 - 27140478
Alignment:
Q  383 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 476  Q
    |||||||| |||||||||| |||||||||||||  |||||||||||||||| ||| ||||| || || |  | ||||||| |||| ||||||||    
T  27140569 agagtttaaggaaacagcttatgacatgtccat--aagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 31517674 - 31517777
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||| |||||  |||||||||||||| ||||||||| |||  ||||  ||||| |||||||||||| |||  ||| |||||||||||| |||    
T  31517674 atttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcat--aagctgttttcagcttattt 31517771  T
Q  438 ccataa 443  Q
     |||||    
T  31517772 tcataa 31517777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 33723316 - 33723419
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||||||||| ||||   |||| ||||||||| |||| |||| | |  |||||||||||||||||||||||| |||   || |||||||||||| |||    
T  33723316 atttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcat--gagatgttttcagcttattt 33723413  T
Q  438 ccataa 443  Q
    ||||||    
T  33723414 ccataa 33723419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 38170631 - 38170717
Alignment:
Q  345 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 433  Q
    |||||||||||  || | ||||||||| |||| |||| |||| ||||| |||||||| ||||||||| |||  ||||||||||||||||    
T  38170631 cttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcat--aagttgttttcagctt 38170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 5157208 - 5157148
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 398  Q
    |||||||||||| ||| || |||| ||||||||||||||||||| |||| |||| ||||||    
T  5157208 atttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaaca 5157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 539
Target Start/End: Complemental strand, 6659703 - 6659631
Alignment:
Q  467 atagcttatagcataagtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||||| || ||  ||||| ||||||||||||||| |||| |||| | |||||||| ||||||||||||    
T  6659703 atagcttatatcaaaaccatgacgtcattttatcttttgctatagaaatagtttatacataagcacttatatg 6659631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 539
Target Start/End: Complemental strand, 13037836 - 13037792
Alignment:
Q  495 tttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatatg 13037792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 478
Target Start/End: Original strand, 14629978 - 14630038
Alignment:
Q  418 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |||||||||||||||| |||||||||| | || |  | |||||||||||||||||||||||    
T  14629978 aagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagc 14630038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 28467268 - 28467316
Alignment:
Q  363 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgt 411  Q
    ||||||||||||||||||| |||| ||||||||| |||||||| |||||    
T  28467268 cacttgtgaaactgtttgggagagcttatggaaatagctcatggcatgt 28467316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 29723605 - 29723545
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||||||||||| || ||||| ||||  | |||||||||||| ||||||||||||||||    
T  29723605 ataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaa 29723545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 476
Target Start/End: Complemental strand, 6292628 - 6292493
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||| |||||| |||||||||| ||| | ||||||| ||| ||| |  |||||||| ||||||||| |||||  | |||||||||||| |||    
T  6292628 atttgagcttatctactgacataagcacttttgagattgtttgggagaattttta-aaacagcttatgacatgttcataa--gctgttttcagcttattt 6292532  T
Q  438 ccataaactgtctagaaaagcttatgaaaatagcttata 476  Q
     ||||| || || | || || ||| ||||||||||||||    
T  6292531 tcataagctctccaaaatagtttacgaaaatagcttata 6292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 46499943 - 46500002
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagt 545  Q
    |||||| |||||||||||| ||||| |||| ||||||| || ||||||||||||| ||||    
T  46499943 tgactttattttatcttttcttatagaaatagcttatagataagcacttatatgttaagt 46500002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 539
Target Start/End: Complemental strand, 49557120 - 49557069
Alignment:
Q  488 acttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||| |||||||||||||||||| ||||  |||||||| |||||||||||||    
T  49557120 actttattttatcttttgttatagaaataacttatacagcagcacttatatg 49557069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 44815237 - 44815340
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||||||||| |||||| ||||||| |||||| ||| | |||||||  | ||||||  |||| |||| ||||  |||||  ||||||||||||| |||    
T  44815237 atttgaacttatctactgacataagcatttgtgagactttgtggaagaactcatggaactagcttatgatatgtgtataaa--ttgttttcagcttattt 44815334  T
Q  438 ccataa 443  Q
    ||||||    
T  44815335 ccataa 44815340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 45999377 - 45999427
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||||| || ||||||||||||||| |||| |||||||||| |||||||||    
T  45999377 tgactttatcttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 289221 - 289168
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| ||||||||||||| || |||||| |||||||| | ||||||||||||    
T  289221 tgactttattttatcttttgctacaaaaatagcttatacttaagcacttatatg 289168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 4200210 - 4200145
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 551  Q
    |||||| |||||||||||||||||||||||  |||||| || | |||||| |||  ||||||||||    
T  4200210 tgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttat 4200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 12477242 - 12477323
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccata 442  Q
    |||| ||||| ||| ||| |||||| ||||| ||| || ||||| |||||||||||||||  |||||||||||||| ||||||||    
T  12477242 ataaacacttctgagactatttgga-gagttaatgaaagcagcttatgacatgtccataa--gttgttttcagcttatttccata 12477323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 478
Target Start/End: Complemental strand, 15361768 - 15361711
Alignment:
Q  421 ttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |||||||||||||  ||||||||||| || |||| | |||||||||| ||||||||||    
T  15361768 ttgttttcagcttaattccataaactctcaagaatatcttatgaaaacagcttatagc 15361711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Complemental strand, 27146015 - 27145978
Alignment:
Q  380 ggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  27146015 ggaagagcttatggaaacagcttatgacatgtccataa 27145978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 44375293 - 44375354
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacag 399  Q
    |||||||||||| |||||| || | ||||||  || |||||||||||||||||| |||||||    
T  44375293 atttgaacttatctactgacattaacacttgcaaacctgtttggaagagtttatagaaacag 44375354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 45327693 - 45327623
Alignment:
Q  361 agcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 433  Q
    ||||||||||| |||  ||||  ||| ||||||||||| || ||||||||||||||||  |||||||||||||    
T  45327693 agcacttgtgagactagttgggggagcttatggaaacaacttatgacatgtccataaa--ttgttttcagctt 45327623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 1730873 - 1730825
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcactt 534  Q
    |||||| ||||||||||| |||| |||||| |||||||||| |||||||    
T  1730873 tgactttattttatctttggttaaaaaaatagcttatacataagcactt 1730825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 11639393 - 11639486
Alignment:
Q  381 gaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 476  Q
    |||||| ||||| |||||||| |||||||||||||  ||| |||||| ||||| ||| ||||| || ||||||| | |||||| ||| || |||||    
T  11639393 gaagagcttatgaaaacagcttatgacatgtccat--aagctgtttttagcttattttcataagctctctagaataacttatgcaaacagtttata 11639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 441
Target Start/End: Complemental strand, 17420319 - 17420238
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccat 441  Q
    |||| ||||||| | ||||||| |||||| ||||| ||||| || || |||||||||||||  ||||||||| ||| |||||||    
T  17420319 ataaacacttgttagactgttttgaagagcttatgaaaacaacttattacatgtccataaa--ttgttttcaacttatttccat 17420238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 28689440 - 28689489
Alignment:
Q  392 ggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    |||||||||| |||||||||||||  |||||||||||||||| ||| |||||    
T  28689440 ggaaacagcttatgacatgtccat--aagttgttttcagcttattttcataa 28689489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 29929581 - 29929646
Alignment:
Q  364 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagc 431  Q
    |||||||| ||||||| | |||| ||||| ||||| |||||||||||| |||  ||||||||||||||    
T  29929581 acttgtgatactgttttggagagcttatgaaaacaactcatgacatgtgcat--aagttgttttcagc 29929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 550
Target Start/End: Original strand, 41638395 - 41638463
Alignment:
Q  482 agtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgctta 550  Q
    |||||||||| |||||||||| |||| || ||||   |||||||| ||||||||||||  |||||||||    
T  41638395 agtatgactttattttatcttgtgttctataaataaattatacataagcacttatatgataagtgctta 41638463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 526
Target Start/End: Complemental strand, 50319273 - 50319233
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacat 526  Q
    |||||| |||||||||||||||||| |||| ||||||||||    
T  50319273 tgactttattttatcttttgttatagaaatagcttatacat 50319233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 47970299 - 47970246
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  47970299 tgacttcattttatcttttgttatagaaatagcttatacataagcacttatatg 47970246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 25717729 - 25717653
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 414  Q
    |||||| ||||| ||| || |||||||||||||||| |||||||||||| ||||||||||| || ||||| ||||||    
T  25717729 atttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgacttgtcca 25717653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 467
Target Start/End: Complemental strand, 19305042 - 19304935
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 457  Q
    ||||||| |||||| | ||| ||| ||| ||| ||||||||||| |||||||||||||  |||||||||||||||| ||||||| |||| || | || ||    
T  19305042 ataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccat--aagttgttttcagcttgtttccattaactctccaaaatag 19304945  T
Q  458 cttatgaaaa 467  Q
    ||||| ||||    
T  19304944 cttataaaaa 19304935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 23819197 - 23819122
Alignment:
Q  366 ttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    |||||| |||||||||||||||||| | |||||||| |||||||||||||  |||||||||||| ||| |||| ||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccat--aagttgttttcatcttatttctataa 23819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 560
Target Start/End: Original strand, 51555956 - 51556030
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagt 560  Q
    |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||  || || |||| ||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataaatggttatgttataagt 51556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 478
Target Start/End: Complemental strand, 24929580 - 24929491
Alignment:
Q  387 tttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    ||||||||||||||| ||| ||||| ||||||  ||||||||||||| ||||||||| || ||||| | || ||||||||| | ||||||||    
T  24929580 tttatggaaacagcttatggcatgttcataaa--ttgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagc 24929491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 2996709 - 2996630
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||||||| || ||| |||||||||| ||| ||||||||  |||| ||||| ||||| || |||||||||||||||    
T  2996709 atttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataa 2996630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 6428154 - 6428075
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||| |||||||| || ||||||||||||||| || |||||  |||| ||||| ||||| || |||||||||||||||    
T  6428154 atttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataa 6428075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 443
Target Start/End: Complemental strand, 47970432 - 47970329
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtt-tggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttt 436  Q
    |||||| ||||| |||||| ||||||||||||||||||||| ||||| || ||||||||||  ||  |||||| ||||||||  ||||||||||||| ||    
T  47970432 atttgagcttatctactgacataagcacttgtgaaactgttatggaa-agcttatggaaactacttgtgacatttccataaa--ttgttttcagcttatt 47970336  T
Q  437 tccataa 443  Q
    | |||||    
T  47970335 tgcataa 47970329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 539
Target Start/End: Original strand, 8422925 - 8422979
Alignment:
Q  485 atgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||| |||||||||||| |||||||||| |||||||||| ||||| ||||||    
T  8422925 atgactttattttatctttttttataaaaatagcttatacataagcacatatatg 8422979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 443
Target Start/End: Complemental strand, 21157904 - 21157801
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| || || |||||| |||||||||||| | |||||||||||||| |||  ||||||||| ||||||| |  | ||||| |||||| ||||| |||    
T  21157904 atttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacattt--acaaaagctgtttttagcttattt 21157807  T
Q  438 ccataa 443  Q
    ||||||    
T  21157806 ccataa 21157801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 3176063 - 3176141
Alignment:
Q  363 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||||||||||||||| | |||| ||||| ||||| || ||| ||||||  || |||||||||||||||| |||||||||    
T  3176063 cacttgtgaaactgtttaggagagcttatgaaaacatcttatgtcatgtc--tataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 539
Target Start/End: Complemental strand, 4191712 - 4191667
Alignment:
Q  494 ttttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagcacttatatg 4191667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 417
Target Start/End: Complemental strand, 52754733 - 52754656
Alignment:
Q  340 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||| |||| ||||| |||||| ||  |||||||||||||||||||| ||||| |||||| | ||||| |||||||||    
T  52754733 ttgagcttaaatactcatataaacatctgtgaaactgtttggaagagcttatgaaaacagtttatgacgtgtccataa 52754656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 478
Target Start/End: Original strand, 7694022 - 7694082
Alignment:
Q  418 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 478  Q
    |||||||||||||||| |||||||||||| || || | | |||||||||| ||||||||||    
T  7694022 aagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagc 7694082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 452
Target Start/End: Original strand, 29467566 - 29467670
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 445  Q
    |||| ||||| |||||  |||||||| | || |||| | || |||| ||||| ||| |||||||||||||||  | |||||||||||| |||||||||||    
T  29467566 ttatctactggtataaatacttgtgagattgcttggtaaagcttatagaaacggcttatgacatgtccataa--gctgttttcagcttatttccataaac 29467663  T
Q  446 tgtctag 452  Q
    | |||||    
T  29467664 tctctag 29467670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 476
Target Start/End: Complemental strand, 9680794 - 9680671
Alignment:
Q  351 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 450  Q
    |||||| | |||||||||| | ||||| ||||||||  |||  |||||||| |||| ||||||||||  |||||||||||| ||||| || || || ||     
T  9680794 tactgagacaagcacttgtaagactgtatggaagagcatataaaaacagcttatgatatgtccataa--gttgttttcagcgttttttcaaaagctttcc 9680697  T
Q  451 agaaaagcttatgaaaatagcttata 476  Q
    || | |||||||||||  ||||||||    
T  9680696 aggatagcttatgaaagcagcttata 9680671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 10172178 - 10172120
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccata 416  Q
    |||||||||||||||||||||||  | || ||||||||||||||  |||||||| ||||    
T  10172178 ataagcacttgtgaaactgtttgatatagcttatggaaacagcttgtgacatgttcata 10172120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 25434346 - 25434420
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtc 412  Q
    |||||| ||||||| || | |||||||||||||||||||||| | |||| ||| | |||||||| || |||||||    
T  25434346 atttgagcttatatgctaaaataagcacttgtgaaactgtttaggagagcttaggaaaacagcttataacatgtc 25434420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 443
Target Start/End: Original strand, 27123306 - 27123389
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 443  Q
    ||||| |||||||| ||||||||  |||| ||||||||||| || ||||||||||  |  |||||||||||| ||| |||||||||    
T  27123306 ataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc--tttaagttgttttcaacttatttccataa 27123389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 416
Target Start/End: Complemental strand, 29376039 - 29375961
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccata 416  Q
    |||||||||||| || ||| ||||||||||||||  || |||   |||| |||||||||||||| |||||| |||||||    
T  29376039 atttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccata 29375961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 478
Target Start/End: Complemental strand, 43932536 - 43932433
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 472  Q
    ||||||| | |||||||| |||| |||||||||||||||||||  |||||||||||| ||| ||| || ||  | |  |||| | ||||||||||||| |    
T  43932536 actgtttaggagagtttacggaagcagctcatgacatgtccat--aagttgttttcatcttattttcacaagttcttcagaataacttatgaaaatagtt 43932439  T
Q  473 tatagc 478  Q
    ||||||    
T  43932438 tatagc 43932433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 398
Target Start/End: Complemental strand, 50396798 - 50396760
Alignment:
Q  360 aagcacttgtgaaactgtttggaagagtttatggaaaca 398  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  50396798 aagcacttgtgaagctgtttgggagagtttatggaaaca 50396760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 535
Target Start/End: Original strand, 51044543 - 51044597
Alignment:
Q  481 aagtatgacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    |||| |||||| |||||||||||||||||| |||| |||||||||| | ||||||    
T  51044543 aagtttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 969434 - 969487
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||| ||||| ||||| |||||||||||| || ||||||||||||    
T  969434 tgactttattttaccttttattatagaaattgcttatagataagcacttatatg 969487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 4471145 - 4471100
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatat 538  Q
    ||||||||||||||||||||||| | |||| ||| |||||||||||    
T  4471145 attttatcttttgttataaaaatagtttatgcataagcacttatat 4471100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 21043195 - 21043248
Alignment:
Q  364 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||| ||||||||| |||| |||||||||||||| |||||| || |||||    
T  21043195 acttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataa 21043248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 28623263 - 28623218
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatat 538  Q
    |||||||||||||||||| ||||  ||||||||| |||||||||||    
T  28623263 attttatcttttgttatataaataacttatacataagcacttatat 28623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 534
Target Start/End: Original strand, 37636297 - 37636342
Alignment:
Q  489 cttcattttatcttttgttataaaaattgcttatacatcagcactt 534  Q
    ||||||||||||||| ||||||||||| | |||||||| |||||||    
T  37636297 cttcattttatctttcgttataaaaatggtttatacataagcactt 37636342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 41097212 - 41097269
Alignment:
Q  360 aagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||||||| |||||| || |||| |||| |||||| || |||||||||||||||    
T  41097212 aagcacttgtgagactgttcgggagagcttatagaaacaactaatgacatgtccataa 41097269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 535
Target Start/End: Original strand, 4798649 - 4798697
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcactta 535  Q
    ||||| ||||||||||||| |||| |||| |||||||||| ||||||||    
T  4798649 gactttattttatcttttgatatagaaatagcttatacataagcactta 4798697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 6987703 - 6987755
Alignment:
Q  366 ttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 418  Q
    |||||| ||||||||| |||| ||||||| ||| || ||||||||||||||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaa 6987755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 9316641 - 9316601
Alignment:
Q  358 ataagcacttgtgaaactgtttggaagagtttatggaaaca 398  Q
    |||| ||||||||||||||||||| |||| |||||||||||    
T  9316641 ataaacacttgtgaaactgtttgggagagcttatggaaaca 9316601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 25583699 - 25583634
Alignment:
Q  367 tgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttt 434  Q
    ||||| ||||||||| || | ||||| ||||| || |||||||||||  |||||||||||||||||||    
T  25583699 tgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtcc--aaaagttgttttcagcttt 25583634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 28232680 - 28232612
Alignment:
Q  339 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgac 407  Q
    ||||||||||| || ||| || |||||||| || |||||||||||||| || |||||||| || |||||    
T  28232680 tttgaacttatctattgacatgagcacttgcgagactgtttggaagagcttgtggaaacaacttatgac 28232612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 493 - 537
Target Start/End: Original strand, 32066505 - 32066549
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttata 537  Q
    ||||||||||||||||||||| | | |||||||| ||||||||||    
T  32066505 attttatcttttgttataaaagtagtttatacataagcacttata 32066549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 551
Target Start/End: Complemental strand, 44319929 - 44319866
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 551  Q
    ||||| |||||||||||| ||||| |||| | |||||||| ||||||||||||  ||||||||||    
T  44319929 gactttattttatctttt-ttatagaaatagtttatacatgagcacttatatgataagtgcttat 44319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 10559 - 10656
Alignment:
Q  346 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 445  Q
    |||| |||||| ||||| |||||||| ||||||||  | || ||||| ||||| || |||||||||||||  |||||||||||||||| |||||||||||    
T  10559 ttatgtactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccat--aagttgttttcagcttatttccataaac 10656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 1163 - 1216
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||||||||    
T  1163 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatg 1216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 2812 - 2759
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||||||||    
T  2812 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatg 2759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 476
Target Start/End: Original strand, 159907 - 160043
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||||| |||| |||||| ||||||||||||| ||| | |||  | |||||||||| | ||||||||||  || |||  ||||||||||| |||    
T  159907 atttgagcttatctactaatataaacacttgtgaaactattttggagaactaatggaaacagtttatgacatgtc--tataagcagttttcagcttattt 160004  T
Q  438 ccataaactgtctagaaaagcttatgaaaatagcttata 476  Q
    ||| || || | ||| | |||||||||||| | ||||||    
T  160005 ccacaagctctttaggatagcttatgaaaacatcttata 160043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 42591 - 42545
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    |||||||||||||||||| ||||  ||||||||| ||||||||||||    
T  42591 attttatcttttgttatagaaatgacttatacataagcacttatatg 42545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 539
Target Start/End: Original strand, 63381 - 63427
Alignment:
Q  493 attttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  63381 attttatcttttgttataaaaatagcttataaacaagcacttatatg 63427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 440
Target Start/End: Complemental strand, 27699 - 27612
Alignment:
Q  351 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcca 440  Q
    |||||| ||| | |||| ||| ||||||||| |||| ||||||||| |||| |||||||| | ||||  |||||||||||||| ||||||    
T  27699 tactgacatatgtacttctgagactgtttgggagagcttatggaaatagcttatgacatggctataa--gttgttttcagcttatttcca 27612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 6726 - 6791
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 551  Q
    |||||| | ||||| |||||||||| |||| | |||||||| ||||||||||||  ||||||||||    
T  6726 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 6791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 116645 - 116710
Alignment:
Q  486 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 551  Q
    |||||| | ||||| |||||||||| |||| | |||||||| ||||||||||||  ||||||||||    
T  116645 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 116710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 477
Target Start/End: Original strand, 4157 - 4294
Alignment:
Q  338 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 437  Q
    |||||| ||| | |||||| ||||||||||||||   ||||||  |||||||||||||||| || |||   |||| ||  |||||||||| | ||| |||    
T  4157 atttgagcttgtctactgacataagcacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaat--aagttgttttaatcttgttt 4254  T
Q  438 ccataaactgtctagaaaagcttatgaaaatagcttatag 477  Q
    || ||| || ||||| | ||||||| |||| |||||||||    
T  4255 ccgtaagctttctagcatagcttattaaaacagcttatag 4294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 536
Target Start/End: Original strand, 35895 - 35935
Alignment:
Q  496 ttatcttttgttataaaaattgcttatacatcagcacttat 536  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  35895 ttatcttttgttataaaaacagcttatacataagcacttat 35935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 539
Target Start/End: Complemental strand, 5999 - 5947
Alignment:
Q  487 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 539  Q
    ||||| |||||||||||||||||  |||||| |||||||| | ||||||||||    
T  5999 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatg 5947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 42691 - 42735
Alignment:
Q  373 actgtttggaagagtttatggaaacagctcatgacatgtccataa 417  Q
    |||||||||||||||||||||||| |||| |||| ||||| ||||    
T  42691 actgtttggaagagtttatggaaatagcttatgatatgtctataa 42735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 467
Target Start/End: Complemental strand, 306412 - 306335
Alignment:
Q  388 ttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaa 467  Q
    |||||||||||||| |||||||| ||||  ||| ||||||||||||  || ||||| || ||||| | ||||||||||||    
T  306412 ttatggaaacagcttatgacatgcccat--aagctgttttcagcttacttacataagctctctaggatagcttatgaaaa 306335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University