View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6920_low_12 (Length: 233)
Name: NF6920_low_12
Description: NF6920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6920_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 26748223 - 26748024
Alignment:
| Q |
24 |
ctagagcctagagaaaccatagtgaacccatgtttgtataactaacgacaaatattgatagggaatctttagtatctcatgagtgtaaatattaccagtg |
123 |
Q |
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| T |
26748223 |
ctagagcctagagaaaccatagtgaacccatgtttgtataactaacgacaaatattgatagggaatctttagtatctcatgagtgtaaatattaccagtg |
26748124 |
T |
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| Q |
124 |
gttcattggtcctactttaatatgtgctatgttgtacacgaccaaaatcaacatctaaaannnnnnngacaagaaaaatcaacatctaaattagctagct |
223 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
26748123 |
gttcattggtcctactttaacatgtgctatgttgtacacgaccaaaatcaacatctaaaatttttttgacaagaaaaatcaacatctaaattagctagct |
26748024 |
T |
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