View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6922_high_3 (Length: 443)

Name: NF6922_high_3
Description: NF6922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6922_high_3
NF6922_high_3
[»] chr3 (16 HSPs)
chr3 (1-426)||(47404724-47405151)
chr3 (1-43)||(46349485-46349527)
chr3 (1-41)||(11869545-11869585)
chr3 (1-43)||(22141204-22141246)
chr3 (1-43)||(24775156-24775198)
chr3 (1-43)||(33583722-33583764)
chr3 (1-43)||(33591211-33591253)
chr3 (1-43)||(33598342-33598384)
chr3 (1-41)||(53056387-53056427)
chr3 (1-44)||(38177345-38177388)
chr3 (1-43)||(11907897-11907939)
chr3 (2-44)||(14955919-14955961)
chr3 (1-43)||(52920865-52920907)
chr3 (2-43)||(14969776-14969817)
chr3 (2-43)||(20646615-20646656)
chr3 (1-45)||(14392661-14392705)
[»] chr7 (25 HSPs)
chr7 (1-43)||(33606143-33606185)
chr7 (1-45)||(23390686-23390730)
chr7 (1-48)||(10882828-10882875)
chr7 (1-43)||(16556465-16556507)
chr7 (1-43)||(16609155-16609197)
chr7 (1-43)||(30944017-30944059)
chr7 (1-43)||(30945050-30945092)
chr7 (3-43)||(4821934-4821974)
chr7 (1-44)||(28622025-28622068)
chr7 (1-43)||(12173983-12174025)
chr7 (1-43)||(13137583-13137625)
chr7 (1-43)||(13880561-13880603)
chr7 (1-43)||(14426970-14427012)
chr7 (1-43)||(15700949-15700991)
chr7 (1-43)||(16111541-16111583)
chr7 (1-43)||(23279699-23279741)
chr7 (1-43)||(30026348-30026390)
chr7 (1-43)||(35952329-35952371)
chr7 (1-43)||(39284270-39284312)
chr7 (1-45)||(13303277-13303321)
chr7 (1-45)||(13692797-13692841)
chr7 (1-45)||(13730367-13730411)
chr7 (1-45)||(24788509-24788553)
chr7 (2-46)||(41841962-41842006)
chr7 (1-37)||(48236602-48236638)
[»] chr5 (8 HSPs)
chr5 (1-45)||(4887463-4887507)
chr5 (1-43)||(5430318-5430360)
chr5 (1-43)||(31118316-31118358)
chr5 (1-43)||(12352474-12352516)
chr5 (1-43)||(21910984-21911026)
chr5 (1-43)||(23412645-23412687)
chr5 (1-43)||(30743469-30743511)
chr5 (3-43)||(21099346-21099386)
[»] chr4 (12 HSPs)
chr4 (1-45)||(10693308-10693352)
chr4 (1-45)||(10907074-10907118)
chr4 (1-43)||(413462-413504)
chr4 (1-43)||(16632893-16632935)
chr4 (1-43)||(29121828-29121870)
chr4 (1-43)||(54680351-54680393)
chr4 (1-43)||(55732248-55732290)
chr4 (1-45)||(8106120-8106164)
chr4 (1-43)||(3793544-3793586)
chr4 (1-43)||(17247714-17247756)
chr4 (1-43)||(19620707-19620749)
chr4 (1-43)||(37985410-37985452)
[»] chr2 (14 HSPs)
chr2 (1-45)||(31800483-31800527)
chr2 (1-43)||(28711316-28711358)
chr2 (1-49)||(28700809-28700857)
chr2 (1-45)||(38631409-38631453)
chr2 (1-44)||(10009370-10009413)
chr2 (1-43)||(18376547-18376589)
chr2 (1-43)||(19540853-19540895)
chr2 (1-43)||(22454593-22454635)
chr2 (1-43)||(23183984-23184026)
chr2 (1-43)||(23595241-23595283)
chr2 (1-43)||(34321505-34321547)
chr2 (1-43)||(40782926-40782968)
chr2 (11-44)||(6392983-6393016)
chr2 (1-45)||(17966750-17966794)
[»] chr6 (9 HSPs)
chr6 (1-44)||(17381891-17381934)
chr6 (1-43)||(7618057-7618099)
chr6 (1-43)||(15955148-15955190)
chr6 (1-46)||(32544721-32544766)
chr6 (1-45)||(13435993-13436037)
chr6 (1-45)||(19086611-19086655)
chr6 (1-44)||(14100118-14100161)
chr6 (1-43)||(16877676-16877718)
chr6 (1-46)||(20487545-20487590)
[»] chr1 (10 HSPs)
chr1 (1-44)||(25448110-25448153)
chr1 (1-43)||(2835150-2835192)
chr1 (1-45)||(22201410-22201454)
chr1 (1-43)||(12613374-12613416)
chr1 (1-43)||(22464370-22464412)
chr1 (1-43)||(23036095-23036137)
chr1 (1-43)||(25447948-25447990)
chr1 (1-43)||(26701723-26701765)
chr1 (1-43)||(32785530-32785572)
chr1 (1-43)||(48704659-48704701)
[»] scaffold1359 (1 HSPs)
scaffold1359 (1-43)||(297-339)
[»] chr8 (13 HSPs)
chr8 (1-43)||(15335698-15335740)
chr8 (1-43)||(15424763-15424805)
chr8 (1-43)||(15516067-15516109)
chr8 (1-43)||(17797875-17797917)
chr8 (1-43)||(20382052-20382094)
chr8 (1-43)||(24551750-24551792)
chr8 (1-43)||(24832710-24832752)
chr8 (1-41)||(45538113-45538153)
chr8 (1-43)||(3597985-3598027)
chr8 (1-43)||(19927499-19927540)
chr8 (1-43)||(22745923-22745965)
chr8 (1-43)||(29693770-29693812)
chr8 (1-45)||(19707961-19708004)
[»] scaffold0488 (1 HSPs)
scaffold0488 (1-45)||(11210-11254)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-44)||(5298-5341)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-44)||(10398-10441)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-43)||(6316-6358)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-43)||(15122-15164)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-43)||(10254-10296)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-43)||(19495-19537)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-43)||(9747-9789)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-43)||(36384-36426)
scaffold0120 (1-43)||(42579-42621)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-43)||(3207-3249)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-43)||(2164-2206)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-43)||(5218-5260)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-43)||(115980-116022)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-43)||(30480-30522)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-43)||(89680-89722)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-46)||(3475-3520)
[»] scaffold0066 (1 HSPs)
scaffold0066 (2-43)||(60493-60534)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-44)||(269193-269229)


Alignment Details
Target: chr3 (Bit Score: 393; Significance: 0; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 47405151 - 47404724
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacatatttacatacaagta--acacgtattactacacttgtttctcttaattatatgctt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |||||| |||||||||| ||||||||||||||||    
T  47405151 caaaactctcaagggttaatgttacacacattttgttccaacatattcacatacaagtataacacctattaccacacttgtttatcttaattatatgctt 47405052  T
Q  99 cttgttatatgttcattaaggaacaatcgtgctcaattttcttgtctaaagataagtagatttcttatagctttgagttttcaagaaccaccaaatcttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47405051 cttgttatatgttcattaaggaacaatcgtgctcaattttcttgtctaaagataagtagatttcttatagcttcgagttttcaagaaccaccaaatcttt 47404952  T
Q  199 tgctatggtcgaccaaactcaaacgtatgagatttagatttaagttctcaagaacctccaaatcttttgctataatcgaccaacctcaaatgcatgaact 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47404951 tgctatggtcgaccaaactcaaacgtatgagatttagatttaagttctcaagaacctccaaatcttttgctataatcgaccaacctcaaatgcatgaact 47404852  T
Q  299 ttagctttaagttcccaggaacaatctacaccaaccttgtatgagctttccatgtgtaacttctcgggtactcatcttgcactcaagaaaccaggacata 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47404851 ttagctttaagttcccaggaacaatctacaccaaccttgtatgagctttccatgtgtaacttctcgggtactcatcttgcactcaagataccaggacata 47404752  T
Q  399 gcagtaaaccttaacctgtaggaaatta 426  Q
    ||||||||||||||||||||||||||||    
T  47404751 gcagtaaaccttaacctgtaggaaatta 47404724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46349527 - 46349485
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  46349527 caaaactctcaagggttaatgttaaacacattttgttccaaca 46349485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11869545 - 11869585
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaa 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  11869545 caaaactctcaagggttaatgttaaacacattttgttccaa 11869585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22141204 - 22141246
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  22141204 caaaactcttaagggttaatgttaaacacattttgttccaaca 22141246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24775198 - 24775156
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  24775198 caaaactcttaagggttaatgttaaacacattttgttccaaca 24775156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33583722 - 33583764
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  33583722 caaaactcttaagggttaatgttaaacacattttgttccaaca 33583764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33591211 - 33591253
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  33591211 caaaactcttaagggttaatgttaaacacattttgttccaaca 33591253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33598342 - 33598384
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  33598342 caaaactcttaagggttaatgttaaacacattttgttccaaca 33598384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 53056427 - 53056387
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaa 41  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  53056427 caaaactcttaagggttaatgttaaacacattttgttccaa 53056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38177388 - 38177345
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    |||||||||||| || |||||||| |||||||||||||||||||    
T  38177388 caaaactctcaaagggtaatgttaaacacattttgttccaacat 38177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11907939 - 11907897
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||    
T  11907939 caaaactctcaaggtttattgttaaacacattttgttccaaca 11907897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 14955919 - 14955961
Alignment:
Q  2 aaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    |||||| | |||||||||||||| |||||||||||||||||||    
T  14955919 aaaacttttaagggttaatgttaaacacattttgttccaacat 14955961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52920865 - 52920907
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  52920865 caaaactctcaaaggataatgttaaacacattttgttccaaca 52920907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 14969776 - 14969817
Alignment:
Q  2 aaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  14969776 aaaactctcaaagggtaatgttaaacacattttgttccaaca 14969817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 20646615 - 20646656
Alignment:
Q  2 aaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  20646615 aaaactctcaaagggtaatgttaaacacattttgttccaaca 20646656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14392705 - 14392661
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||| |||||| || |||||||| ||||||||||||||||||||    
T  14392705 caaaaatctcaaagggtaatgttaaacacattttgttccaacata 14392661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33606143 - 33606185
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  33606143 caaaactctcaagggttaatgttaaacacattttgttccaaca 33606185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23390730 - 23390686
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||    
T  23390730 caaaactcttaagggttaatgttaaacacattttgttccaacata 23390686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10882875 - 10882828
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacatattt 48  Q
    |||||||||||| || |||||||| |||||||||||||||||||||||    
T  10882875 caaaactctcaaagggtaatgttaaacacattttgttccaacatattt 10882828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16556507 - 16556465
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  16556507 caaaactctcaagagttaatgttaaacacattttgttccaaca 16556465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16609155 - 16609197
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  16609155 caaaactctcaagagttaatgttaaacacattttgttccaaca 16609197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30944059 - 30944017
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  30944059 caaaactctcaagggttaattttaaacacattttgttccaaca 30944017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30945092 - 30945050
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  30945092 caaaactctcaagggttaatgttaaatacattttgttccaaca 30945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 4821934 - 4821974
Alignment:
Q  3 aaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  4821934 aaactctcaagggtcaatgttacacacattttgttctaaca 4821974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28622068 - 28622025
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||    
T  28622068 caaaattctcaagggttaatattaaacacattttgttccaacat 28622025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12174025 - 12173983
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||    
T  12174025 caaaactcttaagggttaacgttaaacacattttgttccaaca 12173983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13137625 - 13137583
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  13137625 caaaactctcaaagggtaatgttaaacacattttgttccaaca 13137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13880561 - 13880603
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  13880561 caaaactctcaaagggtaatgttaaacacattttgttccaaca 13880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14426970 - 14427012
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||||| |||||||||| |||||||| |||||||||    
T  14426970 caaaactctcaagagttaatgttaaacacatttcgttccaaca 14427012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15700991 - 15700949
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||    
T  15700991 caaaactcttaagggttaacgttaaacacattttgttccaaca 15700949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16111583 - 16111541
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||    
T  16111583 caaaattcttaagggttaatgttaaacacattttgttccaaca 16111541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23279741 - 23279699
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  23279741 caaaactctcaaagggtaatgttaaacacattttgttccaaca 23279699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30026348 - 30026390
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  30026348 caaaactctcaaagggtaatgttaaacacattttgttccaaca 30026390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35952371 - 35952329
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| |||||||||||| |||||    
T  35952371 caaaactcttaagggttaatgttaaacacattttgttacaaca 35952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39284312 - 39284270
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  39284312 caaaactctcaaagggtaatgttaaacacattttgttccaaca 39284270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13303277 - 13303321
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||| |||| || |||||||| ||||||||||||||||||||    
T  13303277 caaaactttcaaagggtaatgttaaacacattttgttccaacata 13303321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13692797 - 13692841
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| || || |||||||| ||||||||||||||||||||    
T  13692797 caaaactcttaaagggtaatgttaaacacattttgttccaacata 13692841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13730411 - 13730367
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| || || |||||||| ||||||||||||||||||||    
T  13730411 caaaactcttaaagggtaatgttaaacacattttgttccaacata 13730367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24788509 - 24788553
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| || || |||||||| ||||||||||||||||||||    
T  24788509 caaaactcttaaagggtaatgttaaacacattttgttccaacata 24788553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 41842006 - 41841962
Alignment:
Q  2 aaaactctcaagggttaatgttacacacattttgttccaacatat 46  Q
    |||||||||||  | |||||||| |||||||||||||||||||||    
T  41842006 aaaactctcaacagataatgttaaacacattttgttccaacatat 41841962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48236638 - 48236602
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgtt 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  48236638 caaaactcttaagggttaatgttaaacacattttgtt 48236602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4887463 - 4887507
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||    
T  4887463 caaaactcttaagggttaatgttaaacacattttgttccaacata 4887507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5430318 - 5430360
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  5430318 caaaactcttaagggttaatgttaaacacattttgttccaaca 5430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31118316 - 31118358
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  31118316 caaaactctcaagggttaatgttaaacacattttgtttcaaca 31118358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12352516 - 12352474
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  12352516 caaaactctcaaagggtaatgttaaacacattttgttccaaca 12352474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21910984 - 21911026
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  21910984 caaaactctcaaagggtaatgttaaacacattttgttccaaca 21911026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23412687 - 23412645
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  23412687 caaaactctcaaagggtaatgttaaacacattttgttccaaca 23412645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30743469 - 30743511
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| |||||||||||| |||||    
T  30743469 caaaactcttaagggttaatgttagacacattttgttacaaca 30743511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 21099386 - 21099346
Alignment:
Q  3 aaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  21099386 aaactctcaaagggtaatgttaaacacattttgttccaaca 21099346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10693308 - 10693352
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  10693308 caaaactctcaagagttaatgttaaacacattttgttccaacata 10693352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10907074 - 10907118
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  10907074 caaaactctcaagagttaatgttaaacacattttgttccaacata 10907118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 413462 - 413504
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  413462 caaaactctcaagagttaatgttaaacacattttgttccaaca 413504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16632893 - 16632935
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  16632893 caaaactctcaaaggttaatgttaaacacattttgttccaaca 16632935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29121828 - 29121870
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  29121828 caaaactcttaagggttaatgttaaacacattttgttccaaca 29121870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 54680351 - 54680393
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  54680351 caaaactctcaagagttaatgttaaacacattttgttccaaca 54680393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 55732248 - 55732290
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  55732248 caaaactcttaagggttaatgttaaacacattttgttccaaca 55732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8106120 - 8106164
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||    
T  8106120 caaaactcttaagggttaatgataaacacattttgttccaacata 8106164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3793544 - 3793586
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| |||||||| |||||||||    
T  3793544 caaaactctgaagggttaatgttaaacacatttagttccaaca 3793586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17247714 - 17247756
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  17247714 caaaactctcaagggttaatgctaaacatattttgttccaaca 17247756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19620749 - 19620707
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  19620749 caaaactctcaaagggtaatgttaaacacattttgttccaaca 19620707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37985452 - 37985410
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  37985452 caaaactctcaaagggtaatgttaaacacattttgttccaaca 37985410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31800527 - 31800483
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||    
T  31800527 caaaactcttaagggttaatgttaaacacattttgttccaacata 31800483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28711358 - 28711316
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  28711358 caaaactcttaagggttaatgttaaacacattttgttccaaca 28711316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28700857 - 28700809
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacatattta 49  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  28700857 caaaactcttaagggttaatgttaaacacattttattccaacattttta 28700809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38631409 - 38631453
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    |||||||||||| || |||||||| ||||||||||||||||||||    
T  38631409 caaaactctcaaagggtaatgttaaacacattttgttccaacata 38631453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10009413 - 10009370
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    |||||||||||| || |||||||| |||||||||||||||||||    
T  10009413 caaaactctcaaagggtaatgttaaacacattttgttccaacat 10009370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18376589 - 18376547
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  18376589 caaaactctcaaagggtaatgttaaacacattttgttccaaca 18376547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19540853 - 19540895
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  19540853 caaaactctcaaaggataatgttaaacacattttgttccaaca 19540895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22454635 - 22454593
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  22454635 caaaactctcaaagggtaatgttaaacacattttgttccaaca 22454593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23184026 - 23183984
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  23184026 caaaactctcaaaggataatgttaaacacattttgttccaaca 23183984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23595283 - 23595241
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  23595283 caaaactctcaaaggataatgttaaacacattttgttccaaca 23595241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34321547 - 34321505
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||    
T  34321547 caaaactcttaagggttattgttaaacacattttgttccaaca 34321505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40782926 - 40782968
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  40782926 caaaactctcaaagggtaatgttaaacacattttgttccaaca 40782968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 6392983 - 6393016
Alignment:
Q  11 aagggttaatgttacacacattttgttccaacat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  6392983 aagggttaatgttaaacacattttgttccaacat 6393016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17966794 - 17966750
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    |||||||||||| || |||||||| ||||||||| ||||||||||    
T  17966794 caaaactctcaaagggtaatgttaaacacattttattccaacata 17966750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17381891 - 17381934
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  17381891 caaaactcttaagggttaatgttaaacacattttgttccaacat 17381934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7618099 - 7618057
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  7618099 caaaactcttaagggttaatgttaaacacattttgttccaaca 7618057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15955148 - 15955190
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  15955148 caaaactcttaagggttaatgttaaacacattttgttccaaca 15955190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32544721 - 32544766
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacatat 46  Q
    |||||||||||| || |||||||| |||||||||||||||||||||    
T  32544721 caaaactctcaaagggtaatgttaaacacattttgttccaacatat 32544766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13435993 - 13436037
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    |||||||||||| || |||||||| ||||||||||||||||||||    
T  13435993 caaaactctcaaaggataatgttagacacattttgttccaacata 13436037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19086611 - 19086655
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    |||||||||||| || |||||||| ||||||||||||||||||||    
T  19086611 caaaactctcaaagggtaatgttaaacacattttgttccaacata 19086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14100161 - 14100118
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    |||||||||||| || |||||||| |||||||||||||||||||    
T  14100161 caaaactctcaaagggtaatgttaaacacattttgttccaacat 14100118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16877676 - 16877718
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||    
T  16877676 caaaattcttaagggttaatgttaaacacattttgttccaaca 16877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20487590 - 20487545
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacatat 46  Q
    ||||||||| ||| |||||||||| |||||||||||||||| ||||    
T  20487590 caaaactcttaagagttaatgttaaacacattttgttccaatatat 20487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25448153 - 25448110
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  25448153 caaaactcttaagggttaatgttaaacacattttgttccaacat 25448110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2835150 - 2835192
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  2835150 caaaactctcaagggttaatgttaaacacattttgatccaaca 2835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22201454 - 22201410
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    |||||||||||| || |||||||| ||||||||||||||||||||    
T  22201454 caaaactctcaaagggtaatgttaaacacattttgttccaacata 22201410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12613416 - 12613374
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  12613416 caaaactctcaaagggtaatgttaaacacattttgttccaaca 12613374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22464412 - 22464370
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||    
T  22464412 caaaactctcaaaggttaatgttaaacatattttgttccaaca 22464370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23036137 - 23036095
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  23036137 caaaactctcaaagggtaatgttaaacacattttgttccaaca 23036095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25447990 - 25447948
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||    
T  25447990 caaaactctcaaaggttaatgttaaacatattttgttccaaca 25447948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26701765 - 26701723
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  26701765 caaaactctcaaagggtaatgttaaacacattttgttccaaca 26701723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32785572 - 32785530
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  32785572 caaaactctcaaagggtaatgttaaacacattttgttccaaca 32785530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48704659 - 48704701
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  48704659 caaaactctcaaaggataatgttaaacacattttgttccaaca 48704701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 339 - 297
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  339 caaaactctcaagagttaatgttaaacacattttgttccaaca 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15335740 - 15335698
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  15335740 caaaactcttaagggttaatgttaaacacattttgttccaaca 15335698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15424805 - 15424763
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  15424805 caaaactcttaagggttaatgttaaacacattttgttccaaca 15424763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15516109 - 15516067
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  15516109 caaaactcttaagggttaatgttaaacacattttgttccaaca 15516067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17797875 - 17797917
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  17797875 caaaactctcaagggttagtgttaaacacattttgttccaaca 17797917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20382094 - 20382052
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  20382094 caaaactctcaaaggttaatgttaaacacattttgttccaaca 20382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24551750 - 24551792
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  24551750 caaaactcttaagggttaatgttaaacacattttgttccaaca 24551792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24832752 - 24832710
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  24832752 caaaactcttaagggttaatgttaaacacattttgttccaaca 24832710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45538153 - 45538113
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaa 41  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  45538153 caaaactcttaagggttaatgttaaacacattttgttccaa 45538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3598027 - 3597985
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||    
T  3598027 caaaactctgaagagttaatgttaaacacattttgttccaaca 3597985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19927499 - 19927540
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  19927499 caaaactcttaagggttaatgtta-acacattttgttccaaca 19927540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22745923 - 22745965
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  22745923 caaaactctcaaagggtaatgttaaacacattttgttccaaca 22745965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29693770 - 29693812
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  29693770 caaaactctcaaaggataatgttaaacacattttgttccaaca 29693812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19707961 - 19708004
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||    
T  19707961 caaaactctaaagg-ttaatgttaaacacattttgttccaacata 19708004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11254 - 11210
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacata 45  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||    
T  11254 caaaactcttaagggttaatgttaaacacattttgtttcaacata 11210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5341 - 5298
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    |||||||||||| || |||||||| |||||||||||||||||||    
T  5341 caaaactctcaaagggtaatgttaaacacattttgttccaacat 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10398 - 10441
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacat 44  Q
    |||||||||||| || |||||||| |||||||||||||||||||    
T  10398 caaaactctcaaagggtaatgttaaacacattttgttccaacat 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6358 - 6316
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| |||||||||||||  ||||||||||||||||||    
T  6358 caaaactcttaagggttaatgttcaacacattttgttccaaca 6316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15122 - 15164
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  15122 caaaactctcaaagggtaatgttaaacacattttgttccaaca 15164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10254 - 10296
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  10254 caaaactctcaatgggtaatgttaaacacattttgttccaaca 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19495 - 19537
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  19495 caaaactctcaaaggataatgttaaacacattttgttccaaca 19537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9789 - 9747
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  9789 caaaactctcaaagggtaatgttaaacacattttgttccaaca 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36426 - 36384
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  36426 caaaactctcaaagggtaatgttaaacacattttgttccaaca 36384  T

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Target: scaffold0120; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42579 - 42621
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  42579 caaaactctcaaagggtaatgttaaacacattttgttccaaca 42621  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3207 - 3249
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  3207 caaaactctcaaagggtaatgttaaacacattttgttccaaca 3249  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2164 - 2206
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  2164 caaaactctcaaagggtaatgttaaacacattttgttccaaca 2206  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5260 - 5218
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||| ||||||||||| || ||||||||||||||||||    
T  5260 caaaactcttaagggttaatgataaacacattttgttccaaca 5218  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 115980 - 116022
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  115980 caaaactctcaaagggtaatgttaaacacattttgttccaaca 116022  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30522 - 30480
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| || |||||||| ||||||||||||||||||    
T  30522 caaaactctcaaagggtaatgttaaacacattttgttccaaca 30480  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 89722 - 89680
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||    
T  89722 caaaactctcaaaggttaatgttaaacatattttgttccaaca 89680  T

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Target: scaffold0908 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3520 - 3475
Alignment:
Q  1 caaaactctcaagggttaatgttacacacattttgttccaacatat 46  Q
    ||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  3520 caaaactcttaaggtttattgttaaacacattttgttccaacatat 3475  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 60534 - 60493
Alignment:
Q  2 aaaactctcaagggttaatgttacacacattttgttccaaca 43  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  60534 aaaactctcaaagggtaatgttaaacacattttgttccaaca 60493  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 269193 - 269229
Alignment:
Q  8 ctcaagggttaatgttacacacattttgttccaacat 44  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  269193 ctcaaaggttaatgttaaacacattttgttccaacat 269229  T

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