View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6926_high_9 (Length: 348)

Name: NF6926_high_9
Description: NF6926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6926_high_9
NF6926_high_9
[»] chr5 (16 HSPs)
chr5 (1-335)||(15368252-15368588)
chr5 (132-238)||(2937583-2937689)
chr5 (132-213)||(18851083-18851164)
chr5 (133-213)||(9818737-9818818)
chr5 (139-237)||(29821954-29822056)
chr5 (134-213)||(38845446-38845525)
chr5 (132-213)||(6951306-6951387)
chr5 (133-193)||(28110440-28110500)
chr5 (132-213)||(11648085-11648164)
chr5 (149-207)||(14402300-14402358)
chr5 (149-207)||(14403836-14403894)
chr5 (149-207)||(14406618-14406676)
chr5 (151-213)||(22226256-22226318)
chr5 (132-189)||(42858135-42858192)
chr5 (141-193)||(370743-370795)
chr5 (285-329)||(2864460-2864504)
[»] chr3 (22 HSPs)
chr3 (139-320)||(31012914-31013095)
chr3 (132-329)||(31708240-31708436)
chr3 (143-215)||(31492768-31492839)
chr3 (134-271)||(41208251-41208387)
chr3 (5-100)||(3776538-3776633)
chr3 (143-241)||(41298427-41298523)
chr3 (245-330)||(14021833-14021920)
chr3 (5-97)||(35253441-35253533)
chr3 (5-103)||(35264385-35264483)
chr3 (132-209)||(42484500-42484577)
chr3 (132-189)||(46853535-46853592)
chr3 (8-96)||(38332531-38332619)
chr3 (179-217)||(26377449-26377487)
chr3 (5-99)||(37335008-37335102)
chr3 (132-193)||(4526155-4526216)
chr3 (132-213)||(40147851-40147932)
chr3 (141-193)||(4401416-4401468)
chr3 (141-205)||(39054105-39054169)
chr3 (149-193)||(41596167-41596211)
chr3 (167-215)||(42375526-42375574)
chr3 (167-215)||(42404240-42404288)
chr3 (132-212)||(52364055-52364135)
[»] chr1 (27 HSPs)
chr1 (132-241)||(34915041-34915150)
chr1 (141-328)||(40662991-40663179)
chr1 (143-323)||(28267921-28268100)
chr1 (132-193)||(7524136-7524197)
chr1 (132-213)||(1514346-1514427)
chr1 (132-213)||(11049253-11049334)
chr1 (139-240)||(16556456-16556557)
chr1 (141-240)||(47899231-47899328)
chr1 (132-177)||(2555940-2555985)
chr1 (132-213)||(30850400-30850481)
chr1 (8-100)||(48548991-48549081)
chr1 (16-96)||(213522-213602)
chr1 (132-212)||(28287337-28287417)
chr1 (5-52)||(213255-213302)
chr1 (5-99)||(10324912-10325006)
chr1 (163-241)||(46959391-46959469)
chr1 (133-213)||(30557507-30557585)
chr1 (141-213)||(3515821-3515893)
chr1 (151-203)||(36660503-36660555)
chr1 (8-47)||(34915135-34915174)
chr1 (198-241)||(40242836-40242879)
chr1 (139-240)||(52059303-52059405)
chr1 (54-100)||(33693037-33693083)
chr1 (8-66)||(44786895-44786953)
chr1 (152-213)||(28083909-28083970)
chr1 (133-193)||(3416103-3416163)
chr1 (133-213)||(7790644-7790724)
[»] chr4 (17 HSPs)
chr4 (132-231)||(52965855-52965953)
chr4 (7-96)||(55927746-55927835)
chr4 (132-220)||(44278968-44279056)
chr4 (134-213)||(26617471-26617550)
chr4 (141-238)||(38716545-38716635)
chr4 (132-213)||(32818371-32818452)
chr4 (149-213)||(8604640-8604704)
chr4 (8-99)||(10185211-10185303)
chr4 (149-213)||(30357515-30357579)
chr4 (133-193)||(45011897-45011957)
chr4 (132-213)||(1616394-1616474)
chr4 (132-193)||(21691213-21691274)
chr4 (132-209)||(35065070-35065147)
chr4 (5-80)||(41751246-41751321)
chr4 (132-187)||(45694643-45694698)
chr4 (149-210)||(9134616-9134675)
chr4 (4-98)||(22250244-22250338)
[»] chr2 (16 HSPs)
chr2 (5-103)||(4894131-4894229)
chr2 (139-215)||(5533039-5533115)
chr2 (132-213)||(43501128-43501207)
chr2 (141-240)||(31415311-31415410)
chr2 (141-273)||(17281350-17281484)
chr2 (132-213)||(42982547-42982628)
chr2 (5-97)||(33961956-33962047)
chr2 (132-206)||(33019157-33019231)
chr2 (151-213)||(42740980-42741042)
chr2 (5-93)||(42741000-42741087)
chr2 (132-208)||(44439262-44439338)
chr2 (132-193)||(8800699-8800760)
chr2 (132-193)||(11504063-11504123)
chr2 (5-50)||(15220835-15220880)
chr2 (132-193)||(32596014-32596075)
chr2 (5-89)||(44439281-44439365)
[»] chr8 (17 HSPs)
chr8 (132-213)||(32927895-32927976)
chr8 (132-213)||(13384655-13384736)
chr8 (8-86)||(35495290-35495368)
chr8 (132-213)||(38868501-38868582)
chr8 (139-213)||(15677823-15677898)
chr8 (140-213)||(4662912-4662985)
chr8 (132-212)||(26100147-26100227)
chr8 (8-74)||(16972041-16972107)
chr8 (278-328)||(32842468-32842518)
chr8 (132-213)||(35494993-35495074)
chr8 (132-213)||(37684408-37684489)
chr8 (14-61)||(10553155-10553202)
chr8 (5-71)||(2924822-2924888)
chr8 (133-187)||(40848046-40848100)
chr8 (5-93)||(32927915-32928003)
chr8 (149-213)||(32994260-32994324)
chr8 (8-40)||(35035453-35035485)
[»] chr6 (26 HSPs)
chr6 (213-330)||(46357-46476)
chr6 (132-240)||(3289713-3289829)
chr6 (132-213)||(4910911-4910992)
chr6 (132-193)||(17225875-17225936)
chr6 (5-100)||(34620902-34620997)
chr6 (5-100)||(34748339-34748434)
chr6 (132-213)||(1485147-1485228)
chr6 (154-241)||(10669486-10669573)
chr6 (134-193)||(46291-46352)
chr6 (6-100)||(1485121-1485215)
chr6 (16-100)||(852548-852632)
chr6 (132-211)||(29338598-29338675)
chr6 (143-214)||(6654102-6654173)
chr6 (195-273)||(11598507-11598583)
chr6 (167-213)||(765422-765468)
chr6 (132-189)||(947594-947649)
chr6 (150-212)||(8854924-8854986)
chr6 (29-99)||(9505787-9505857)
chr6 (139-189)||(34027425-34027475)
chr6 (132-193)||(3482069-3482130)
chr6 (132-213)||(16540110-16540191)
chr6 (156-209)||(30927050-30927103)
chr6 (133-213)||(5724632-5724712)
chr6 (149-213)||(7952727-7952791)
chr6 (8-80)||(30926756-30926827)
chr6 (141-193)||(33496650-33496702)
[»] chr7 (16 HSPs)
chr7 (134-213)||(41386818-41386897)
chr7 (151-232)||(1442557-1442638)
chr7 (5-61)||(40561732-40561788)
chr7 (132-172)||(32295228-32295268)
chr7 (24-100)||(38123659-38123735)
chr7 (5-100)||(41788332-41788427)
chr7 (139-213)||(27571865-27571939)
chr7 (132-213)||(45005023-45005104)
chr7 (150-213)||(30182315-30182378)
chr7 (132-193)||(32683584-32683645)
chr7 (132-213)||(38123667-38123748)
chr7 (132-193)||(40491601-40491662)
chr7 (132-172)||(17111889-17111929)
chr7 (10-66)||(42064384-42064440)
chr7 (143-187)||(42816480-42816524)
chr7 (5-73)||(45557408-45557476)
[»] scaffold0361 (1 HSPs)
scaffold0361 (5-90)||(14088-14173)
[»] scaffold0009 (1 HSPs)
scaffold0009 (182-214)||(207115-207147)
[»] scaffold0168 (1 HSPs)
scaffold0168 (149-209)||(31833-31893)
[»] scaffold0024 (1 HSPs)
scaffold0024 (195-239)||(149953-149997)


Alignment Details
Target: chr5 (Bit Score: 298; Significance: 1e-167; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 15368588 - 15368252
Alignment:
Q  1 agggaagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  15368588 agggaagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtgtaaagatcaattatagaatcagaagctacaacttctag 15368489  T
Q  101 tttgtgtcagttgtatgtttggttcgttacggtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtag 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15368488 tttgtgtcagttgtatgtttggttcgttaaggtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagttacaactagtag 15368389  T
Q  201 cttcaagtagaattgcttttagttcccaaaattgatttctcgataaaatcccatacataattt--tagagttagattgcttttagcacttgaaaagcact 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  15368388 cttcaagtagaattgcttttagttcccaaaattgatttctcgataaaatgccatacataattttatagagtaagattgcttttagcacttgaaaagcact 15368289  T
Q  299 tctaggacatctagaagtgaaaccaaacactccaagt 335  Q
    |||||||||||||||||||||||||||||||||||||    
T  15368288 tctaggacatctagaagtgaaaccaaacactccaagt 15368252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 2937583 - 2937689
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaa 231  Q
    |||||| ||||| ||| ||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||    
T  2937583 gtaaaaatgagtagaaatataaatttgtgtgttataatcaattctagaatcaaaggctacaaatagtagctttaagtagaatttcttttagttcccaaaa 2937682  T
Q  232 ttgattt 238  Q
    |||||||    
T  2937683 ttgattt 2937689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 18851083 - 18851164
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| |||||| || ||||||| ||||||| | ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  18851083 gtaaaagtgagtttaactataaatatgtgtgtgaaaatcaattctataatcaaaagctacaaatcatagcttcaagtagaat 18851164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 9818818 - 9818737
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaa-tcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||| ||||||||| ||||||||||||| | | || ||||||||| ||||||||||||||| |  ||||||||||||||||    
T  9818818 taaaagtgagttgaactataaatttgtgtttaaaaaatcaattctagaatcaaaagctacaaatcatagcttcaagtagaat 9818737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 29822056 - 29821954
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaatcaattc----tataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattg 234  Q
    |||||||||| |||||||||| ||||||||||||||     || |||||||| |||||| || ||||||||| |||||||| ||||| |  |||||||||    
T  29822056 tgagttgaatgataaatttgtatgttagaatcaattaattataaaatcaaaaactacaaataatagcttcaaatagaattgtttttaatctccaaaattg 29821957  T
Q  235 att 237  Q
    |||    
T  29821956 att 29821954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 38845525 - 38845446
Alignment:
Q  134 aaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||| |||||| || |||| |||||||||| | ||||||||||| |||||||| |||||| |  ||||||||||||||||    
T  38845525 aaaagtgagtttaactatatatttgtgtgtgaaaatcaattctagaatcaaaaactacaaatcttagcttcaagtagaat 38845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 6951306 - 6951387
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||| ||||||||||||||| |||||   |||||||| || ||||||||||||||| |  || |||||||||||||    
T  6951306 gtaaaagtgaattgaattataaatttatgtgtacaaatcaattatagaatcaaaagctacaaatcctaacttcaagtagaat 6951387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 28110440 - 28110500
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    ||||| |||||| || ||||||||||||||| | ||||||||||| ||||||||| |||||    
T  28110440 taaaagtgagttcaactataaatttgtgtgtgaaaatcaattctaaaatcaaaagttacaa 28110500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 11648164 - 11648085
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||||||||  || |||||| | |||||||| |||||||||||  ||||| |  ||||||||||||||||    
T  11648164 gtaaaattgagttgaattata--ttcgtgtgtgaaaatcaattttataatcaaaatgtacaaatcttagcttcaagtagaat 11648085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 14402300 - 14402358
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaag 207  Q
    ||||||| | ||| |||||||||||| |||||||||||||||||| || || |||||||    
T  14402300 tataaatctatgttttagaatcaattttataatcaaaagctacaaatattaacttcaag 14402358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 14403836 - 14403894
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaag 207  Q
    ||||||| | ||| |||||||||||| |||||||||||||||||| || || |||||||    
T  14403836 tataaatctatgttttagaatcaattttataatcaaaagctacaaatattaacttcaag 14403894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 14406618 - 14406676
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaag 207  Q
    ||||||| | ||| |||||||||||| |||||||||||||||||| || || |||||||    
T  14406618 tataaatctatgttttagaatcaattttataatcaaaagctacaaatattaacttcaag 14406676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 22226256 - 22226318
Alignment:
Q  151 taaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||||||| | | | ||||||| ||||||||||||||| || || |||||||||||||    
T  22226256 taaatttgtgtgtaaaagttaattctaaaatcaaaagctacaaatactatcttcaagtagaat 22226318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 42858192 - 42858135
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagct 189  Q
    |||||| ||||||||| ||||||||||||||| | |||||||| || ||| |||||||    
T  42858192 gtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattatagaattaaaagct 42858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 370743 - 370795
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    ||||||| |||||||||||||||   |||||||| || |||||||||||||||    
T  370743 agttgaagtataaatttgtgtgtacaaatcaattttaaaatcaaaagctacaa 370795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 2864504 - 2864460
Alignment:
Q  285 acttgaaaagcacttctaggacatctagaagtgaaaccaaacact 329  Q
    ||||||||||||||||||   |||||| |||||||||||||||||    
T  2864504 acttgaaaagcacttctaaagcatctaaaagtgaaaccaaacact 2864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 139 - 320
Target Start/End: Complemental strand, 31013095 - 31012914
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgattt 238  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  31013095 tgagttgaattctaaatttgtgtgttagaatcaattctagattcaaaggctacaaatagtaggttcaagtagaattgcttttagtccccaaaattgattt 31012996  T
Q  239 ctcgataaaatcccatacataattt-tagagttagattgcttttagcacttgaaaagcacttctaggacatctagaagtgaaa 320  Q
     | || ||||| ||| ||||||||| |||||||   |||||||| ||||||||||||||||| || | |||||||||||||||    
T  31012995 attga-aaaatgccaaacataatttatagagttgagttgcttttggcacttgaaaagcacttataaggcatctagaagtgaaa 31012914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 329
Target Start/End: Original strand, 31708240 - 31708436
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaa 231  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||| | | |||    
T  31708240 gtaaaagtgagttgaattataaatttgtgtgttagaatcaattctagaatcaaaagctacaaatagtagcttcgagtataattgcttttagtcctcgaaa 31708339  T
Q  232 ttgatttctcgataaaatcccatacataattttagagttaga-ttgcttttagcacttgaaaagcacttctaggacatctagaagtgaaaccaaacact 329  Q
    ||||||| || | ||||| ||| |||||| |||| ||||||| |||||||| ||||||||||||||||| |  | |||||| ||||||||| |||||||    
T  31708340 ttgatttatc-aaaaaatgccaaacataa-tttatagttagagttgcttttggcacttgaaaagcacttattaggcatctaaaagtgaaacaaaacact 31708436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 31492839 - 31492768
Alignment:
Q  143 ttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattg 215  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  31492839 ttgaattataaatttgtgtgtta-aatcaattctagaatcaaaagctacaaatagttgcttcaaatagaattg 31492768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 271
Target Start/End: Original strand, 41208251 - 41208387
Alignment:
Q  134 aaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaatt 233  Q
    ||||| ||||| ||||| |||||||||||||| | |||||| || ||| ||||||||||| ||||| |||||| || |||||||| |||| ||| || ||    
T  41208251 aaaacagagttaaattaaaaatttgtgtgttaaagtcaattttaaaatgaaaagctacaagtagtatcttcaa-taaaattgcttatagtcccctaagtt 41208349  T
Q  234 gatttctcgataaaatcccatacataattttagagtta 271  Q
    |||| ||||| |||||  || ||||||||||| |||||    
T  41208350 gattgctcgaaaaaatatcaaacataattttatagtta 41208387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 3776633 - 3776538
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    |||||||||||| ||| ||||||  |||||||||||| || | ||||| |||||||| |||| || |||| ||||| |||||||||||||||||||    
T  3776633 aagtgatttatgcttggatacattgatgtaaaagtgagttcagcaacaaatttgagtgtaaaaattaattctagaatcagaagctacaatttctag 3776538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 41298523 - 41298427
Alignment:
Q  143 ttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgatttctc 241  Q
    ||||||||| ||||||||   |||||||||||||| ||| |||| |||||| |||||||||||  ||||||| |||||||||| ||||||| |||||||    
T  41298523 ttgaattatgaatttgtgc--tagaatcaattctagaataaaaaactacaaatagtagcttcatttagaattacttttagttcgcaaaattaatttctc 41298427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 14021920 - 14021833
Alignment:
Q  245 aaaatcccatacataatttta--gagttaga-ttgcttttagcacttgaaaagcacttctaggacatctagaagtgaaaccaaacactc 330  Q
    ||||| ||| |||||||||||  |||||||| ||||||||  |||||||||| |||||||| | |||||||||||||||||||||||||    
T  14021920 aaaatgccaaacataattttatggagttagaattgcttttgtcacttgaaaaacacttctaag-catctagaagtgaaaccaaacactc 14021833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 35253441 - 35253533
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttc 97  Q
    ||||||||||| |||| | |||  ||||||||||||| |||||  | | |||||||| |||| ||||||| |||||||||||||||| |||||    
T  35253441 aagtgatttatatttggaaacaatcatgtaaaagtgagttgaatgataaatttgagtgtaaaaatcaattctagaaccagaagctactatttc 35253533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 35264385 - 35264483
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctagttt 103  Q
    |||||| |||||||||  ||||| ||||||||| |||||||||||| | |||| ||| | || ||||||| ||||| || |||||  ||||||||||||    
T  35264385 aagtgagttatgtttgggtacattcatgtaaaaatgacttgaacaataaatttaagtgttaaaatcaattctagaatcaaaagctctaatttctagttt 35264483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 42484500 - 42484577
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagta 209  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||| | ||| || ||| || |||||| ||||||||    
T  42484500 gtaaaagtgagttggattataaatttgtgtgttttaatcaattctagactcagaatctaaaaatagtagtttcaagta 42484577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 46853535 - 46853592
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagct 189  Q
    |||||| |||||||||  ||||||||| |||||| ||||||||||| |||||||||||    
T  46853535 gtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaaagct 46853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 38332531 - 38332619
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaattt 96  Q
    ||||||||||||| |||||| |||| | || ||| |||||||| | |||||||| |||| | ||||| ||||| |||||||| ||||||    
T  38332531 tgatttatgtttgtatacattcatggataaatgagttgaacaataaatttgagtgtaaataccaattttagaatcagaagctccaattt 38332619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 26377449 - 26377487
Alignment:
Q  179 aatcaaaagctacaactagtagcttcaagtagaattgct 217  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  26377449 aatctaaagctacaaatagtagcttcaagtagaattgct 26377487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 37335008 - 37335102
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttcta 99  Q
    ||||||||||||| ||||||||| ||| ||||| ||| ||||||||   |||  ||| |||| ||||||| ||||| || ||||||| |||||||    
T  37335008 aagtgatttatgtctgaatacattcatataaaaatgagttgaacaatgaattcaagtgtaaaaatcaattctagaatcaaaagctacgatttcta 37335102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 4526216 - 4526155
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| || |||||| ||||||||||||||| | |||||||| || ||||||||| |||||    
T  4526216 gtaaaagtgtgttgaactataaatttgtgtgtaaaaatcaattttaaaatcaaaagttacaa 4526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 40147851 - 40147932
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| |||||||||| |||||||   |||||  ||||||||||| ||||||||||| ||| |  |||||| |||||||||    
T  40147851 gtaaaagtgagttgaatgataaattcaagtgttgaaatcaattctagaatcaaaagctccaaattctagcttgaagtagaat 40147932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 4401416 - 4401468
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||||||||||||| |||||| | |||||| | || |||||||||||||||    
T  4401416 agttgaattataaattggtgtgtaaaaatcaactttaaaatcaaaagctacaa 4401468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 39054105 - 39054169
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttca 205  Q
    |||| |||||||||||| | ||||| ||||||||||| ||| ||||| || || |||||||||||    
T  39054105 agttaaattataaatttatatgttaaaatcaattctagaattaaaagttataaatagtagcttca 39054169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 41596167 - 41596211
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| |||||||| | |||||||||| ||||||||||||||||    
T  41596167 tataaacttgtgtgtaaaaatcaattctttaatcaaaagctacaa 41596211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 42375574 - 42375526
Alignment:
Q  167 aatcaattctataatcaaaagctacaactagtagcttcaagtagaattg 215  Q
    |||||||||||| |||||| ||||||| |  ||||||||||||||||||    
T  42375574 aatcaattctatgatcaaacgctacaaattatagcttcaagtagaattg 42375526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 42404288 - 42404240
Alignment:
Q  167 aatcaattctataatcaaaagctacaactagtagcttcaagtagaattg 215  Q
    |||||||||||| |||||| ||||||| |  ||||||||||||||||||    
T  42404288 aatcaattctatgatcaaacgctacaaattatagcttcaagtagaattg 42404240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 52364135 - 52364055
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaa 212  Q
    |||||| ||||||||| | ||||||| ||| | | |||||||| || |||||||||||| || |  |||||||||||||||    
T  52364135 gtaaaagtgagttgaactgtaaatttatgtttgaaaatcaattatagaatcaaaagctataaatcatagcttcaagtagaa 52364055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 34915150 - 34915041
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaa 231  Q
    |||||| |||||||||||||||| | |||||||||||||||||||| |||||||||||||||  | ||||||||| ||||||| |||||||| | |||||    
T  34915150 gtaaaagtgagttgaattataaaatggtgtgttagaatcaattctagaatcaaaagctacaaagaatagcttcaactagaatttcttttagtcctcaaaa 34915051  T
Q  232 ttgatttctc 241  Q
    ||||||||||    
T  34915050 ttgatttctc 34915041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 328
Target Start/End: Original strand, 40662991 - 40663179
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgatttct 240  Q
    |||||||||||||||||||||||||  |||||||||  ||||||||||||||| || |||||| ||||||||||| |||||||    |||||||||||||    
T  40662991 agttgaattataaatttgtgtgtta--atcaattcttgaatcaaaagctacaaatactagctttaagtagaattgtttttagtctataaaattgatttct 40663088  T
Q  241 cgataaaatcccatacataattt--tagagt-tagattgcttttagcacttgaaaagcacttctaggacatctagaagtgaaaccaaacac 328  Q
    | | |||||  || | |||||||  |||||| || |||||||||  || ||||||||||||| || | |||||| |||||||| |||||||    
T  40663089 caaaaaaatgtcaaatataattttatagagtgtaaattgcttttgacatttgaaaagcacttttatggcatctaaaagtgaaaacaaacac 40663179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 28267921 - 28268100
Alignment:
Q  143 ttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgatttctcg 242  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| || ||||||  |||| ||  |||||||||| ||||||||  |||||||||||||||      
T  28267921 ttgaattataaatttatgcgttaaaattaattctagaatcataaactacaaa-agtacct--aagtagaattccttttagtctccaaaattgatttctaa 28268017  T
Q  243 ataaaatcccatacataatttta--gagttaga-ttgcttttagcacttgaaaagcacttctaggacatctagaagtgaaacca 323  Q
    | ||||| ||| ||| |||||||  |||||||| ||||||||  |||||||||| |||||||| |||||||| |||||||||||    
T  28268018 a-aaaatgccaaacaaaattttatggagttagaattgcttttgacacttgaaaaacacttctaagacatctaaaagtgaaacca 28268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 7524197 - 7524136
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  7524197 gtaaaagtgagttgaactataaatttgtgtgtaaaaatcaattctataatcaaaagctacaa 7524136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 1514427 - 1514346
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| |||||||||  |||||||||||||| | |||||||| |||||| ||||||||||| |  ||||||||||||||||    
T  1514427 gtaaaaatgagttgaacaataaatttgtgtgtaaaaatcaattatataataaaaagctacaaatcctagcttcaagtagaat 1514346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 11049334 - 11049253
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||| ||||| ||||||||||||||| | |||||||| || ||||||||||||||| |  ||||||||||||||||    
T  11049334 gtaaaagtgacttgaactataaatttgtgtgtaaaaatcaattttagaatcaaaagctacaaatcctagcttcaagtagaat 11049253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 16556557 - 16556456
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgattt 238  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||||||| |  || |||||| ||| ||| || ||| |||||||  |||||| ||||||    
T  16556557 tgagttgaattatgaatttgtgtgtcagaatcaattctagaatcaaaagttgtaaatagtagtttcgagtcgagttgtttttagtctccaaaactgattt 16556458  T
Q  239 ct 240  Q
    ||    
T  16556457 ct 16556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 47899328 - 47899231
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgatttct 240  Q
    |||||||| |||| ||||||| |||  ||||| |||| ||| |||| |||||| |||||||||| |||||||||| ||||||| | ||||||||||||||    
T  47899328 agttgaatcataagtttgtgtttta--atcaaatctaaaataaaaaactacaaatagtagcttctagtagaattgtttttagtcctcaaaattgatttct 47899231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 2555985 - 2555940
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattcta 177  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||    
T  2555985 gtaaaagtgagttgaattataaatttgtatgttagaatcaattcta 2555940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 30850400 - 30850481
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||| ||| |||| |||||| |  ||| ||||||||||||    
T  30850400 gtaaaagtgagttgaactataaatttgtatgttaaaatcaattctaaaattaaaaactacaaatcctagtttcaagtagaat 30850481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 48548991 - 48549081
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    ||||||||||||  ||||||  |||||||||||| |||||||| | ||  |||| |||| ||||||| ||||| |||||||||||||||||||    
T  48548991 tgatttatgttttgatacatttatgtaaaagtgagttgaacaataaat--gagtttaaaaatcaattctagaatcagaagctacaatttctag 48549081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 213522 - 213602
Alignment:
Q  16 gtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaattt 96  Q
    ||||| || ||| ||||||||||||| |||||||||| |||||||| |||| ||||||| ||||| || |||| |||||||    
T  213522 gtttggatgcattcatgtaaaagtgagttgaacaacaaatttgagtttaaaaatcaattctagaatcaaaagccacaattt 213602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 28287337 - 28287417
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaa 212  Q
    |||||| | |||||||  ||||||||| |||||| ||||||||||| ||||||||||||||| |  | |||||||||||||    
T  28287337 gtaaaagttagttgaacaataaatttgagtgttaaaatcaattctaaaatcaaaagctacaaatccttgcttcaagtagaa 28287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 213255 - 213302
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaaca 52  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  213255 aagtgatttatgtttggatacatgcatgtaaaagtgagttgaacaaca 213302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 10324912 - 10325006
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttcta 99  Q
    ||||||| | ||| || ||||||  |||||||||||| |  ||||| | |||||||| |||| ||||||||||||| || |||||||||||||||    
T  10324912 aagtgatatgtgtatggatacattaatgtaaaagtgagtataacaataaatttgagtgtaaaaatcaattatagaatcaaaagctacaatttcta 10325006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 46959391 - 46959469
Alignment:
Q  163 ttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgatttctc 241  Q
    ||||||||| ||||| ||||||||  || || ||||| ||||| ||| ||||||||||||| ||||||||| |||||||    
T  46959391 ttagaatcagttctagaatcaaaaattaaaaatagtaacttcatgtataattgcttttagtccccaaaattaatttctc 46959469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 30557585 - 30557507
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||| ||||||||| ||||||||||||||  | ||||||||||| |||||||| |||||| |  ||||||||| ||||||    
T  30557585 taaaagtgagttgaactataaatttgtgtg--aaaatcaattctagaatcaaaaactacaaatcctagcttcaactagaat 30557507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 3515893 - 3515821
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||||| |||| |||| |||| | ||||||||||| ||| ||||||||||| |  ||||||||||||||||    
T  3515893 agttgaatgataattttgagtgtaaaaatcaattctagaatgaaaagctacaatttctagcttcaagtagaat 3515821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 36660503 - 36660555
Alignment:
Q  151 taaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagctt 203  Q
    ||||||||||||||||| |||||| || |||||||||||| || |||||||||    
T  36660503 taaatttgtgtgttagattcaattttagaatcaaaagctagaaatagtagctt 36660555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 34915174 - 34915135
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtgacttgaa 47  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  34915174 tgatttatgtttgaatacattcatgtaaaagtgagttgaa 34915135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 40242836 - 40242879
Alignment:
Q  198 tagcttcaagtagaattgcttttagttcccaaaattgatttctc 241  Q
    |||||||||||||||||| |||| |||||| |||||||||||||    
T  40242836 tagcttcaagtagaattgtttttggttcccgaaattgatttctc 40242879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 52059405 - 52059303
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagta---gcttcaagtagaattgcttttagttcccaaaattga 235  Q
    ||||||||||||||| |  |||| |||||||||||| || ||| |||| || ||| |||||   ||||| |||||||||| |||||||  ||||||||||    
T  52059405 tgagttgaattataact--gtgtattagaatcaattatagaattaaaacctgcaattagtattagcttctagtagaattgtttttagtctccaaaattga 52059308  T
Q  236 tttct 240  Q
    |||||    
T  52059307 tttct 52059303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 33693083 - 33693037
Alignment:
Q  54 atttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    |||||||| |||| ||||||||||||| || ||||||||||||||||    
T  33693083 atttgagtgtaaaaatcaattatagaatcaaaagctacaatttctag 33693037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 44786895 - 44786953
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaa 66  Q
    ||||||||||| |||||||| ||||||||||||| || ||||||| |||| | ||||||    
T  44786895 tgatttatgttcgaatacattcatgtaaaagtgaattcaacaacaaatttaaatataaa 44786953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 28083909 - 28083970
Alignment:
Q  152 aaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||||||||| | ||| |||| || ||||||||||||||| |  ||||||||||||||||    
T  28083909 aaatttgtgtgtaaaaattaattatagaatcaaaagctacaaattctagcttcaagtagaat 28083970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 3416163 - 3416103
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    ||||| |||||| || ||||||||||||||| | ||||||||||| ||| |||| ||||||    
T  3416163 taaaattgagttaaactataaatttgtgtgtaaaaatcaattctaaaataaaaaactacaa 3416103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 7790644 - 7790724
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||| |||||||||  |||||||||||||| | |||||||| || |||| ||| |||||| |  || |||||||||||||    
T  7790644 taaaagtgagttgaacaataaatttgtgtgtaaaaatcaattatagaatctaaatctacaaatcataacttcaagtagaat 7790724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 52965855 - 52965953
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaa 231  Q
    |||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||| || ||||| ||||||||||||| | |||||||| ||||||    
T  52965855 gtaaaagtgagttgaattataaatttatgtgttagaatcaattttagaatcaaaagctataaatagtaacttcaagtagaatcg-ttttagtttccaaaa 52965953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 55927746 - 55927835
Alignment:
Q  7 gtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaattt 96  Q
    |||||||||||||| |||||| |||||||||||||||||||||| | |||||||| | | |||||||| ||||| |||||||||||||||    
T  55927746 gtgatttatgtttggatacattcatgtaaaagtgacttgaacaataaatttgagtgtgacgatcaattctagaatcagaagctacaattt 55927835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 44278968 - 44279056
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgctttt 220  Q
    |||||| ||| |||||||| |||||| |||||||||||||||| || ||| ||||| ||||  |||||| |||||||||||||| ||||    
T  44278968 gtaaaaatgatttgaattaaaaatttatgtgttagaatcaattttaaaataaaaagatacatatagtagtttcaagtagaattgatttt 44279056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 26617550 - 26617471
Alignment:
Q  134 aaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||||||||||||||||||||| | | | | |||||||| |||||||||||||||||  |  ||||||||||||||||    
T  26617550 aaaactgagttgaattataaatttatctataaaaatcaattttataatcaaaagctacagattctagcttcaagtagaat 26617471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 38716635 - 38716545
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgattt 238  Q
    |||||||||||||||||||  |||||||||||       |||||||||||||| |||||||||||| |||||||| ||||| |  |||||||||||||    
T  38716635 agttgaattataaatttgtaagttagaatcaa-------atcaaaagctacaaatagtagcttcaactagaattgtttttaatctccaaaattgattt 38716545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 32818371 - 32818452
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| | ||||||| ||||||||||||||  | ||||||||||| ||||||||||||||| |  ||||||||| ||||||    
T  32818371 gtaaaagttagttgaactataaatttgtgtgcaaaaatcaattctagaatcaaaagctacaaattctagcttcaaatagaat 32818452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 8604640 - 8604704
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||||||||| | ||||||||||| |||| |||||||||| |  ||||||||||||||||    
T  8604640 tataaatttgtgtgtgaaaatcaattctagaatcgaaagctacaaatcttagcttcaagtagaat 8604704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 10185303 - 10185211
Alignment:
Q  8 tgatttatgttt-gaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttcta 99  Q
    |||||||||||| | ||||||  |||||||||||| || ||||| | |||||||| |||||||||||| ||||| || ||||| |||||||||    
T  10185303 tgatttatgttttggatacattaatgtaaaagtgagttaaacaataaatttgagtgtaaagatcaattttagaatcaaaagcttcaatttcta 10185211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 30357579 - 30357515
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||||||||| | |||||||| |||||||||||||||||| |   |||||||||||||||    
T  30357579 tataaatttgtgtgtaaaaatcaattatataatcaaaagctacaaatcacagcttcaagtagaat 30357515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 45011957 - 45011897
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    ||||| |||||  |||||||||||||||||| | ||||||||||| |||||||||||||||    
T  45011957 taaaagtgagtaaaattataaatttgtgtgtgaaaatcaattctagaatcaaaagctacaa 45011897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 1616474 - 1616394
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||| | ||||  |||||||  |||||||||||| ||||||||||||||| | ||||||| |||||||||    
T  1616474 gtaaaaatgagttgaactttaaacatgtgtgtgggaatcaattctagaatcaaaagctacaaattgtagctt-aagtagaat 1616394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 21691213 - 21691274
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| || |||||| ||||||||||||||| | ||||||||||| || ||||||||||||    
T  21691213 gtaaaagtgtgttgaactataaatttgtgtgtgaaaatcaattctacaaccaaaagctacaa 21691274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 35065147 - 35065070
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagta 209  Q
    |||||| ||||| ||  ||||||||||||||| | ||||||||||| |||||||||  |||| || ||||||||||||    
T  35065147 gtaaaagtgagtggagatataaatttgtgtgtaaaaatcaattctagaatcaaaagtcacaaatactagcttcaagta 35065070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 41751246 - 41751321
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaa 80  Q
    |||||||| |||||||||||||| ||||||||| ||| || ||||| | |||| ||| |||| ||||||| |||||    
T  41751246 aagtgattaatgtttgaatacattcatgtaaaactgaattaaacaataaatttaagtttaaaaatcaattctagaa 41751321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 45694698 - 45694643
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaag 187  Q
    |||||| |||||| || ||||||| ||||||||||||||||||||| ||| |||||    
T  45694698 gtaaaaatgagttcaactataaatgtgtgtgttagaatcaattctagaattaaaag 45694643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 9134675 - 9134616
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtag 210  Q
    ||||||||||||||  | ||||||||||| ||||||||||||||| |  |||||||||||||    
T  9134675 tataaatttgtgtg--aaaatcaattctaaaatcaaaagctacaaattttagcttcaagtag 9134616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 22250338 - 22250244
Alignment:
Q  4 gaagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttct 98  Q
    |||||||||||  |||| |||||| ||||||||||||| | |||||| | |||||||||| || | |||||  |||| || ||||| ||||||||    
T  22250338 gaagtgatttacatttggatacattcatgtaaaagtgaatcgaacaataaatttgagtattaaaagcaatttcagaatcaaaagcttcaatttct 22250244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 4894131 - 4894229
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctagttt 103  Q
    |||||||||||||||  |||||| ||| ||||||||||||||| || | ||||||||||||  ||||||||||||| || ||||||| |||||||||||    
T  4894131 aagtgatttatgtttagatacattcatttaaaagtgacttgaataataaatttgagtataataatcaattatagaatcaaaagctacgatttctagttt 4894229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 5533039 - 5533115
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattg 215  Q
    ||||||||||||||||||| ||||||  ||||||||  | ||||||||||||||| |||||||||||||||||||||    
T  5533039 tgagttgaattataaatttatgtgtttaaatcaatttaagaatcaaaagctacaaatagtagcttcaagtagaattg 5533115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 43501207 - 43501128
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||||||||||||||||||| |||||||  |||||||||||||| ||||||||||||||| |  ||| ||||||||||||    
T  43501207 gtaaaactgagttgaattataattttgtgt--tagaatcaattctaaaatcaaaagctacaaatcctagtttcaagtagaat 43501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 31415410 - 31415311
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgatttct 240  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| ||    ||| || ||||| |||||||| ||||| | || |||||||||||||    
T  31415410 agttgaattataaatttgtgtgtaagaatcaattctaaaattaaaaggtatcgatagaagtttcaaatagaattgtttttaatccctaaaattgatttct 31415311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 273
Target Start/End: Complemental strand, 17281484 - 17281350
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttc-ccaaaattgatttc 239  Q
    |||| |||||||||||||||| ||| |||||||| || |||  |||||||||  ||||||||||||||| ||||| ||| ||| | | ||||||||||||    
T  17281484 agttcaattataaatttgtgtattaaaatcaattttaaaattgaaagctacagatagtagcttcaagtataattgttttaagtcctcaaaaattgatttc 17281385  T
Q  240 tcgataaaatcccatacataa-ttttagagttaga 273  Q
    ||   ||||| | | |||||| |||||||||||||    
T  17281384 tcataaaaatgctaaacataatttttagagttaga 17281350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 42982628 - 42982547
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||| |  |||||||||||||| | ||||||||||  ||||||||||||||| |  ||||||||||||||||    
T  42982628 gtaaaagtgagttgtaaaataaatttgtgtgtaaaaatcaattctggaatcaaaagctacaatttctagcttcaagtagaat 42982547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 33961956 - 33962047
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttc 97  Q
    |||| |||| |||||||||| ||| |||||||| |||||||||||| | |||||||| |||| ||||||||||||| || || || |||||||    
T  33961956 aagtaatttttgtttgaatatatc-atgtaaaaatgacttgaacaataaatttgagtctaaaaatcaattatagaatcaaaaactccaatttc 33962047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 33019157 - 33019231
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaa 206  Q
    |||||| ||||||||| ||||||||| ||||| | ||||||||||| || |||||||||||| |  |||||||||    
T  33019157 gtaaaagtgagttgaactataaatttatgtgtgaaaatcaattctaaaaccaaaagctacaaattctagcttcaa 33019231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 42741042 - 42740980
Alignment:
Q  151 taaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||||| |||| | ||||||||||| ||||||||||||||| |  ||||||||||||||||    
T  42741042 taaatttgagtgtaaaaatcaattctagaatcaaaagctacaaatcttagcttcaagtagaat 42740980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 42741087 - 42741000
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaa 93  Q
    ||||||||| |||||||||||||  |||||||||||| ||| |||  | |||||||| |||| ||||||| ||||| || |||||||||    
T  42741087 aagtgatttgtgtttgaatacatt-atgtaaaagtgagttggacagtaaatttgagtgtaaaaatcaattctagaatcaaaagctacaa 42741000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 44439338 - 44439262
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagt 208  Q
    |||||| |||||||||  ||||||||| |||||| |||||||| || ||||||||||| ||| |  |||||||||||    
T  44439338 gtaaaagtgagttgaacaataaatttgagtgttaaaatcaattttagaatcaaaagctccaaattttagcttcaagt 44439262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 8800699 - 8800760
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| ||||||||||||||||||||| | ||| |||||||| || | ||||||| |||||    
T  8800699 gtaaaagtgagttgaattataaatttgtatattaaaatcaattatagattcaaaagttacaa 8800760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 11504063 - 11504123
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| ||||||||| ||||| ||||||||| | || ||||||||||||||||| ||||||    
T  11504063 gtaaaagtgagttgaactataactttgtgtgtgaaaa-caattctataatcaaaaactacaa 11504123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15220835 - 15220880
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaa 50  Q
    |||||||||||||||| |||||| ||||| ||||||| ||||||||    
T  15220835 aagtgatttatgtttggatacattcatgttaaagtgagttgaacaa 15220880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 32596075 - 32596014
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| ||||||||||||| ||||||| ||| | |||||||| || ||||||||| |||||    
T  32596075 gtaaaagtgagttgaattatgaatttgtatgtaaaaatcaattttagaatcaaaagttacaa 32596014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 44439365 - 44439281
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagct 89  Q
    |||||||||||||||| |||  |  |||||||||||| |||||||| | |||||||| | || ||||||| ||||| || |||||    
T  44439365 aagtgatttatgtttggatatgtttatgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattttagaatcaaaagct 44439281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 32927976 - 32927895
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||| ||||||||||||||| | ||| ||||||||||||||||||||||| |  ||||||||||||||||    
T  32927976 gtaaaagtgagttgaactataaatttgtgtgtaaaaatgaattctataatcaaaagctacaaatcctagcttcaagtagaat 32927895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 13384655 - 13384736
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| |  ||||||||| ||||||    
T  13384655 gtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattctagaatcaaaagctacaaattttagcttcaaatagaat 13384736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 35495368 - 35495290
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaa 86  Q
    ||||||||||||| |||||| ||  ||||||||| |||||||| | ||||||||||||| ||||||||||||| |||||    
T  35495368 tgatttatgtttggatacattcaaataaaagtgatttgaacaataaatttgagtataaaaatcaattatagaatcagaa 35495290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 38868582 - 38868501
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||| ||||||||||||||| | |||||||| || || |||||||||||| |  ||||||||||||||||    
T  38868582 gtaaaattgagttgaactataaatttgtgtgtgaaaatcaattatagaaccaaaagctacaaatcttagcttcaagtagaat 38868501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 15677823 - 15677898
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaa-tcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||| ||||||||||||||| | || |||||||||||||||||||||| || |  ||||||||||||||||    
T  15677823 tgagttgaactataaatttgtgtgtaaaaaatcaattctataatcaaaagctataaatcctagcttcaagtagaat 15677898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 4662912 - 4662985
Alignment:
Q  140 gagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||||| |||| |||||||||| | ||||||||||| || |||||||||||| |  ||||||||||||||||    
T  4662912 gagttgaactatacatttgtgtgtaaaaatcaattctagaaacaaaagctacaaatcctagcttcaagtagaat 4662985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 26100147 - 26100227
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaa 212  Q
    |||||| |||||||||  |||||||||||||| | |||||||| || ||||||||||||||| |  ||||||||| |||||    
T  26100147 gtaaaagtgagttgaaccataaatttgtgtgtaaaaatcaattatagaatcaaaagctacaaatcctagcttcaaatagaa 26100227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 16972041 - 16972107
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaatt 74  Q
    |||||| ||||||||||||| ||||||||||||| |||||||| | ||||| || |||| |||||||    
T  16972041 tgatttgtgtttgaatacattcatgtaaaagtgatttgaacaataaatttgtgtttaaaaatcaatt 16972107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 32842468 - 32842518
Alignment:
Q  278 ttttagcacttgaaaagcacttctaggacatctagaagtgaaaccaaacac 328  Q
    ||||| |||||||||| || ||||| |||||||||||||||||||||||||    
T  32842468 ttttaacacttgaaaaacatttctaagacatctagaagtgaaaccaaacac 32842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 35495074 - 35494993
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| | ||||||| |||| |||||||||| | || |||||||| ||||||||||||||| |  |||||||| |||||||    
T  35495074 gtaaaagtaagttgaactatagatttgtgtgtaaaaaacaattctagaatcaaaagctacaaatcctagcttcatgtagaat 35494993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 37684489 - 37684408
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||||||||||||| ||  ||| |||||||| || |||||||||| |||| |  || |||||||||||||    
T  37684489 gtaaaagtgagttgaattataaatttttgcattaaaatcaattttagaatcaaaagccacaaatcctaacttcaagtagaat 37684408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 10553155 - 10553202
Alignment:
Q  14 atgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagt 61  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||||    
T  10553155 atgtttaaatacatttatgtaaaagtgagttgaacaacatatttgagt 10553202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 2924888 - 2924822
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatca 71  Q
    |||||| ||||||||| ||||||  |||||||||||| |||| ||| |||||||||| |||| ||||    
T  2924888 aagtgagttatgtttggatacatatatgtaaaagtgagttgatcaatatatttgagtgtaaaaatca 2924822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 40848100 - 40848046
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaag 187  Q
    ||||| |||||| |||||||| ||||||||| | ||||||||||| |||||||||    
T  40848100 taaaaatgagtttaattataagtttgtgtgtgaaaatcaattctaaaatcaaaag 40848046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 32928003 - 32927915
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaa 93  Q
    ||||||||| |||||| |||||| ||||||||||||| |||||| | | ||||| || |||| || |||| || || || |||||||||    
T  32928003 aagtgatttgtgtttggatacattcatgtaaaagtgagttgaactataaatttgtgtgtaaaaatgaattctataatcaaaagctacaa 32927915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 32994260 - 32994324
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||||||| | | ||||||||||| | |||||||||| || |  ||||||||||||||||    
T  32994260 tataaatttgtgtataaaaatcaattctagactcaaaagctagaaatcatagcttcaagtagaat 32994324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 35035453 - 35035485
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtg 40  Q
    |||||||||||||||||||| ||||||||||||    
T  35035453 tgatttatgtttgaatacattcatgtaaaagtg 35035485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 330
Target Start/End: Original strand, 46357 - 46476
Alignment:
Q  213 ttgcttttagttcccaaaattgatttctcgataaaatcccatacataatttta--gagttaga-ttgcttttagcacttgaaaagcacttctaggacatc 309  Q
    ||||||||||| ||||||||||||||||| | |||||  || || ||||||||  |||||||| ||| |||| | |||| ||||||||||||| ||||||    
T  46357 ttgcttttagtccccaaaattgatttctcaa-aaaatgtcaaacgtaattttatggagttagaattgtttttggtacttaaaaagcacttctaagacatc 46455  T
Q  310 tagaagtgaaaccaaacactc 330  Q
    ||||| |||||||||||||||    
T  46456 tagaaatgaaaccaaacactc 46476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 3289829 - 3289713
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaa--------tcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagt 223  Q
    |||||| ||||||||||||||||||||||||||||||        |||| | || ||| |||| | |||| ||||||||||||||| |||||||||||||    
T  3289829 gtaaaagtgagttgaattataaatttgtgtgttagaaacttagaatcaactgtagaataaaaaacgacaagtagtagcttcaagtataattgcttttagt 3289730  T
Q  224 tcccaaaattgatttct 240  Q
     || |||||||||||||    
T  3289729 ccctaaaattgatttct 3289713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 4910992 - 4910911
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||| ||| ||||||||||| ||| | ||||||||||| ||||||||||||||| |  ||||||||||||||||    
T  4910992 gtaaaagtgagtcgaactataaatttgtatgtgaaaatcaattctagaatcaaaagctacaaatcatagcttcaagtagaat 4910911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 17225936 - 17225875
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||||||||||||| ||||||||||| ||| | ||||||||||| |||||||||||||||    
T  17225936 gtaaaactgagttgaactataaatttgtatgtaaaaatcaattctagaatcaaaagctacaa 17225875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 34620997 - 34620902
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    |||||||||||||||| ||||||  |||||||||||| ||||| || | |||| ||| |||| ||||||| ||||| |||||||||  ||||||||    
T  34620997 aagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattctagaatcagaagctatgatttctag 34620902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 34748434 - 34748339
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    |||||||||||||||| ||||||  |||||||||||| ||||| || | |||| ||| |||| ||||||| ||||| |||||||||  ||||||||    
T  34748434 aagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattctagaatcagaagctatgatttctag 34748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 1485147 - 1485228
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| |||||||||  ||||||||| |||||| ||||||||||| ||||||||||| ||| |  ||| ||||||||||||    
T  1485147 gtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaaagctccaatttctagattcaagtagaat 1485228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 10669486 - 10669573
Alignment:
Q  154 atttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaattgatttctc 241  Q
    |||| ||||||||||||||||| | ||| |||| |||||| ||||| ||||||||||| ||  |||||||  ||||||||||| ||||    
T  10669486 atttttgtgttagaatcaattccagaataaaaaactacaaatagtaccttcaagtagatttatttttagtctccaaaattgatctctc 10669573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 46291 - 46352
Alignment:
Q  134 aaaactgagttgaattataaa--tttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||| ||||||||||||||||  ||||| |||||||||| |||||| |||||||||||||||    
T  46291 aaaagtgagttgaattataaaaatttgtttgttagaatctattctagaatcaaaagctacaa 46352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 1485121 - 1485215
Alignment:
Q  6 agtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    ||||||||| ||||| |||||   |||||||||||| |||||||| | |||||||| | || ||||||| ||||| || ||||| ||||||||||    
T  1485121 agtgatttacgtttggatacacttatgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaaagctccaatttctag 1485215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 852632 - 852548
Alignment:
Q  16 gtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    ||||| || ||| ||||||||||||| || ||||| | ||||| || |||| ||||||| ||||| ||||| |||||||||||||    
T  852632 gtttgtatgcattcatgtaaaagtgagttaaacaatacatttgggtgtaaaaatcaattctagaatcagaacctacaatttctag 852548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 29338598 - 29338675
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtaga 211  Q
    |||||| ||| |||||||| |||||| |||  |||||||||||||| ||||| ||| ||||| ||| |||||||||||||    
T  29338598 gtaaaagtgaattgaattaaaaatttatgt--tagaatcaattctaaaatcataagttacaaatagaagcttcaagtaga 29338675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 6654102 - 6654173
Alignment:
Q  143 ttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaatt 214  Q
    ||||| ||||||||| ||||| | |||||| |||| ||| ||||||||||| |  |||||||||||||||||    
T  6654102 ttgaactataaatttctgtgtgaaaatcaaatctagaattaaaagctacaaatcctagcttcaagtagaatt 6654173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 11598507 - 11598583
Alignment:
Q  195 tagtagcttcaagtagaattgcttttagttcccaaaattgatttctcgataaaatcccatacataattttagagttaga 273  Q
    ||||| ||| |||||||||||  |||||| ||||||||||||||||| | |||||  || |||||| ||||||||||||    
T  11598507 tagtaccttaaagtagaattg--tttagtccccaaaattgatttctcaaaaaaatgtcagacataaatttagagttaga 11598583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 765422 - 765468
Alignment:
Q  167 aatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||||    
T  765422 aatcaattctagaatcaaaagctacaaatcatagcttcaagtagaat 765468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 947649 - 947594
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagct 189  Q
    |||||| |||||||||||||||  |||||| | ||||||||||||| |||||||||||    
T  947649 gtaaaagtgagttgaattataa--ttgtgtttaagaatcaattctagaatcaaaagct 947594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 8854986 - 8854924
Alignment:
Q  150 ataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaa 212  Q
    |||||||||| ||| | ||||||||||||| |||||| |||||| | ||||||||| ||||||    
T  8854986 ataaatttgtatgtaaaaatcaattctatagtcaaaaactacaaattgtagcttcatgtagaa 8854924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 9505857 - 9505787
Alignment:
Q  29 catgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttcta 99  Q
    ||||||||||||  |||||||| | |||||||| |||| |||||| |||||| || ||||| |||||||||    
T  9505857 catgtaaaagtgtgttgaacaataaatttgagtttaaaaatcaatcatagaatcaaaagctccaatttcta 9505787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 34027425 - 34027475
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagct 189  Q
    |||||||||| ||||||||| |||| | ||||||||||| |||||||||||    
T  34027425 tgagttgaataataaatttgagtgtaaaaatcaattctagaatcaaaagct 34027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 3482130 - 3482069
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| | ||||||| |||||| |||||||| | ||||||||||| ||||||| |||||||    
T  3482130 gtaaaagtaagttgaactataaacttgtgtgtgaaaatcaattctaaaatcaaaggctacaa 3482069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 16540191 - 16540110
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| |||||| || ||||||| |||  || | | ||||||| ||||||||||||||||| |  ||||||||||||||||    
T  16540191 gtaaaagtgagtttaactataaatatgtaagtgaaactcaattcaataatcaaaagctacaaatcctagcttcaagtagaat 16540110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 30927103 - 30927050
Alignment:
Q  156 ttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagta 209  Q
    |||||||| | ||||||||||||||||||||||||| | |  ||||||||||||    
T  30927103 ttgtgtgtaaaaatcaattctataatcaaaagctacgaatcttagcttcaagta 30927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 5724632 - 5724712
Alignment:
Q  133 taaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||| |||||| ||| ||| |||||||||| | |||||||| || ||| ||||| ||||| |  ||||||||||||||||    
T  5724632 taaaagtgagttaaatgatatatttgtgtgtaaaaatcaattatagaataaaaagttacaaatcctagcttcaagtagaat 5724712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 7952727 - 7952791
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||||||||| | |  |||||||| ||||||||||||||| |  | ||||||||||||||    
T  7952727 tataaatttgtgtgtgaaacccaattctagaatcaaaagctacaaatcctcgcttcaagtagaat 7952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 30926756 - 30926827
Alignment:
Q  8 tgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaa 80  Q
    ||||||||||||||||| || |||| |||||| | |||||||| | |||||||| |||| ||||||| |||||    
T  30926756 tgatttatgtttgaatatattcatgcaaaagt-aattgaacaataaatttgagtgtaaaaatcaattctagaa 30926827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 33496702 - 33496650
Alignment:
Q  141 agttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    ||||||||||||||||||| ||| | ||| |||||||||||| ||| ||||||    
T  33496702 agttgaattataaatttgtatgtaaaaataaattctataatcgaaaactacaa 33496650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 41386818 - 41386897
Alignment:
Q  134 aaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||| ||||||||||||||||||||||||| |  |||||||||| ||| ||||||||||| |  ||||||||||||||||    
T  41386818 aaaagtgagttgaattataaatttgtgtgtaaatatcaattctagaattaaaagctacaaatcctagcttcaagtagaat 41386897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 1442638 - 1442557
Alignment:
Q  151 taaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaattgcttttagttcccaaaat 232  Q
    ||||||||||| |||||||||||| || |||||||||||| |  || || |||||||||||||||||||||||  |||||||    
T  1442638 taaatttgtgttttagaatcaattatagaatcaaaagctatacataataacttcaagtagaattgcttttagtatccaaaat 1442557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 40561732 - 40561788
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagt 61  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||    
T  40561732 aagtgatttatgtttggatacattcatgtaaaagtgagttgaacaatatatttgagt 40561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 32295268 - 32295228
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaa 172  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  32295268 gtaaaagtgagttgaattataaatttgtgtgttagaatcaa 32295228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 38123659 - 38123735
Alignment:
Q  24 acatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    |||| ||||||||||||| |||| ||| | |||||||| |||| ||||||| |||||  ||||||||||||||||||    
T  38123659 acattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctag 38123735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 41788427 - 41788332
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagctacaatttctag 100  Q
    |||||||||||||||| ||||||  || ||||||||| ||||||| || |||||||| | || ||||||||||||  || ||| | ||||||||||    
T  41788427 aagtgatttatgtttgtatacattaatataaaagtgagttgaacagcaaatttgagtgttaaaatcaattatagactcaaaagtttcaatttctag 41788332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 27571939 - 27571865
Alignment:
Q  139 tgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||||||| ||||| ||| |||||| ||||||||||| ||||||||||| ||| |  || |||||||||||||    
T  27571939 tgagttgaataataaacttgagtgttaaaatcaattctagaatcaaaagctccaatttctaacttcaagtagaat 27571865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 45005104 - 45005023
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| |||||||||| ||||||||| ||| ||  ||||||||||||||||||  || ||| |  ||||||||||||||||    
T  45005104 gtaaaagtgagttgaataataaatttgagtgctaagatcaattctataatcaaagcctccaatttttagcttcaagtagaat 45005023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 30182315 - 30182378
Alignment:
Q  150 ataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    ||||||||| |||| | ||| ||||||| ||||||||||||||| |  ||||||||||||||||    
T  30182315 ataaatttgagtgtaaaaattaattctagaatcaaaagctacaatttttagcttcaagtagaat 30182378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 32683645 - 32683584
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| |||||| |||||||||||| ||||  | |||||||||||  ||||||||||||||    
T  32683645 gtaaaagtgagttaaattataaatttatgtgggaaaatcaattctaatatcaaaagctacaa 32683584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 38123667 - 38123748
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagtagaat 213  Q
    |||||| ||||||||   ||||||||| |||| | ||||||||||| ||| | ||||||||| |  ||||||||||||||||    
T  38123667 gtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaat 38123748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 40491662 - 40491601
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaattctataatcaaaagctacaa 193  Q
    |||||| |||||| || | ||||||||||||| | | ||||||||| |||||||||||||||    
T  40491662 gtaaaagtgagttaaactttaaatttgtgtgtaaaagtcaattctagaatcaaaagctacaa 40491601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 17111929 - 17111889
Alignment:
Q  132 gtaaaactgagttgaattataaatttgtgtgttagaatcaa 172  Q
    |||||| ||||| ||||||||||||||||||| ||||||||    
T  17111929 gtaaaaatgagtagaattataaatttgtgtgtaagaatcaa 17111889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 42064384 - 42064440
Alignment:
Q  10 atttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaa 66  Q
    ||||||||||||||||||   |||| | ||||||||||||||| |||||||| ||||    
T  42064384 atttatgtttgaatacatttgtgtacatgtgacttgaacaacaaatttgagtgtaaa 42064440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 42816480 - 42816524
Alignment:
Q  143 ttgaattataaatttgtgtgttagaatcaattctataatcaaaag 187  Q
    ||||||||||||||||||||| | ||||||||||| ||| |||||    
T  42816480 ttgaattataaatttgtgtgtgaaaatcaattctagaattaaaag 42816524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 45557476 - 45557408
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaat 73  Q
    ||||||||| |||||| |||||| ||||||||||||| |||| | ||| ||||| || |||| ||||||    
T  45557476 aagtgatttgtgtttggatacattcatgtaaaagtgagttgagctacaaatttgtgtgtaaaaatcaat 45557408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 14088 - 14173
Alignment:
Q  5 aagtgatttatgtttgaatacatccatgtaaaagtgacttgaacaacatatttgagtataaagatcaattatagaaccagaagcta 90  Q
    |||||||||||||||| |||||| ||||| ||||||| ||||| || | |||||||| |||| ||||||| ||||| || ||||||    
T  14088 aagtgatttatgtttggatacattcatgtgaaagtgagttgaaaaataaatttgagtgtaaaaatcaattctagaatcataagcta 14173  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 207115 - 207147
Alignment:
Q  182 caaaagctacaactagtagcttcaagtagaatt 214  Q
    |||||||||||||||||||||||||||||||||    
T  207115 caaaagctacaactagtagcttcaagtagaatt 207147  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 31893 - 31833
Alignment:
Q  149 tataaatttgtgtgttagaatcaattctataatcaaaagctacaactagtagcttcaagta 209  Q
    ||||||| ||| ||| | ||||||||| ||||||||||||||||| |  ||||||||||||    
T  31893 tataaatatgtatgtgaaaatcaattcaataatcaaaagctacaaatcctagcttcaagta 31833  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 149997 - 149953
Alignment:
Q  195 tagtagcttcaagtagaattgcttttagttcccaaaattgatttc 239  Q
    ||||||||| ||||||||||| ||||||| | |||||||||||||    
T  149997 tagtagcttaaagtagaattgattttagtcctcaaaattgatttc 149953  T

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