View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6928_low_2 (Length: 431)
Name: NF6928_low_2
Description: NF6928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6928_low_2 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 36 - 408
Target Start/End: Complemental strand, 46479336 - 46478964
Alignment:
| Q |
36 |
gagagatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttca |
135 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46479336 |
gagagatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttca |
46479237 |
T |
|
| Q |
136 |
cggcttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgac |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46479236 |
cggcttccctgaactctggtattcatggcgccaccagattgctgctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgac |
46479137 |
T |
|
| Q |
236 |
accgatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttg |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46479136 |
accgatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttg |
46479037 |
T |
|
| Q |
336 |
tagctcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46479036 |
tagctcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
46478964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 40 - 408
Target Start/End: Complemental strand, 46520762 - 46520394
Alignment:
| Q |
40 |
gatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggc |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46520762 |
gatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggc |
46520663 |
T |
|
| Q |
140 |
ttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccg |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46520662 |
ttccctgaactctggtattcatggcgccaccagattgctgctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccg |
46520563 |
T |
|
| Q |
240 |
atgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagc |
339 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46520562 |
atgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagc |
46520463 |
T |
|
| Q |
340 |
tcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||| |
|
|
| T |
46520462 |
tcatgattggggtgccatgattggttggtatctttgcatgtttcgccctgaaagaatcaaagcctatgt |
46520394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 49 - 402
Target Start/End: Complemental strand, 46490525 - 46490172
Alignment:
| Q |
49 |
aatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggcttccctgaa |
148 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||| |||||||||| |||||||||||| |
|
|
| T |
46490525 |
aatagaacacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaa |
46490426 |
T |
|
| Q |
149 |
ctctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccg |
248 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| | |
|
|
| T |
46490425 |
ctctggtattcatggcgccaccagatttctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccgg |
46490326 |
T |
|
| Q |
249 |
cttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattg |
348 |
Q |
| |
|
| || || || ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
46490325 |
cctccattagtagctacacaatcttccatttggttggtgacatcgttgctctcatcgactcacttggcgttgaccgagtgtttcttgtagctcatgattg |
46490226 |
T |
|
| Q |
349 |
gggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagc |
402 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
46490225 |
gggtgccatcattggttggtatctttgtttgtttcgccctgaaagaatcaaagc |
46490172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 37 - 411
Target Start/End: Complemental strand, 46532384 - 46532010
Alignment:
| Q |
37 |
agagatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcac |
136 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| || |||||||||||||| || ||||| ||||||||||| |
|
|
| T |
46532384 |
agagatggaaggaatagaacacagaacagtggaggtgaatggaatcaaaatgcatattgctgaaaaaggaaaagaaggacctgttgtcttgttccttcat |
46532285 |
T |
|
| Q |
137 |
ggcttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgaca |
236 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || |||||||||||||| |||||||| || |||| |
|
|
| T |
46532284 |
ggcttcccagaactctggtattcatggcgccaccaaattgtagctcttggctccctcggttaccgcgccgttgctccagatctgcgtggctatggtgaca |
46532185 |
T |
|
| Q |
237 |
ccgatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgt |
336 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| || ||| | || ||||| | ||||| || || || | || || |||||||||||||| ||||| |
|
|
| T |
46532184 |
ccgaggctccatcttcaataagcagctacactggttttcacattgtaggtgaccttgttgcacttatagatttgcttggtgttgaccaagtgtttcttgt |
46532085 |
T |
|
| Q |
337 |
agctcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgtctg |
411 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||| | ||||||||||||| |||||||||||||||||| |
|
|
| T |
46532084 |
ggctcatgattggggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctg |
46532010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 39 - 411
Target Start/End: Complemental strand, 46524829 - 46524457
Alignment:
| Q |
39 |
agatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacgg |
138 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| || ||||| ||||||||||| || |
|
|
| T |
46524829 |
agatggaaggaatagaacacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgtcttgttccttcatgg |
46524730 |
T |
|
| Q |
139 |
cttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacacc |
238 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| ||||| |||||||| || |||||| |
|
|
| T |
46524729 |
cttcccagaactctggtattcatggcgccaccagattgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacacc |
46524630 |
T |
|
| Q |
239 |
gatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtag |
338 |
Q |
| |
|
|||||||| ||||| | || ||||||||| || ||| | || |||||| | ||||| || || || | || || ||||| |||||||| ||||| | |
|
|
| T |
46524629 |
gatgctccgtcttcagttagtagctacacaggttttcacatagtaggtgatcttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttg |
46524530 |
T |
|
| Q |
339 |
ctcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgtctg |
411 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||| | ||||||||||||| |||||||||||||||||| |
|
|
| T |
46524529 |
ctcatgattggggtgctatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctg |
46524457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 37 - 390
Target Start/End: Complemental strand, 46494835 - 46494482
Alignment:
| Q |
37 |
agagatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcac |
136 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||| ||||||||||| |
|
|
| T |
46494835 |
agagatggaaggaatagagcacagaacagtggaagtgaatggaatcaaaatgcatattgctgaaaaaggaaaagaaggacctgttgtcctgttccttcac |
46494736 |
T |
|
| Q |
137 |
ggcttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgaca |
236 |
Q |
| |
|
|| ||||||||||||||||| || ||||||||||||||||| ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| || ||||| | |
|
|
| T |
46494735 |
ggattccctgaactctggtactcttggcgccaccagattgcggctctcggctctctcggttaccgggctgtggctcccgatcttcgtggttatggcgata |
46494636 |
T |
|
| Q |
237 |
ccgatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgt |
336 |
Q |
| |
|
| |||| ||| ||| ||| ||| || ||||||||||||||||| ||||| || ||||| ||||||||||| || || ||||| ||||| |||||||| |
|
|
| T |
46494635 |
ctgatgtccccagttcggtaaacagttatacaatcttccacttggttggtgacattgttgcgctcatcgactcgcttggggttgatcaagtcttccttgt |
46494536 |
T |
|
| Q |
337 |
agctcatgattggggtgccatgattggttggtatctttgtttatttcgccctga |
390 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| || ||||||||||| |
|
|
| T |
46494535 |
ggctcatgattggggtgccatcgttggttggtatctttgcttgtttcgccctga |
46494482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 36 - 408
Target Start/End: Original strand, 46326432 - 46326804
Alignment:
| Q |
36 |
gagagatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttca |
135 |
Q |
| |
|
||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| || ||||||||||||||||| |
|
|
| T |
46326432 |
gagagatggaaagaatagaacatagaacagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgttttgttccttca |
46326531 |
T |
|
| Q |
136 |
cggcttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgac |
235 |
Q |
| |
|
|||||| |||||||||||||| || ||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||| |||||||| || ||| |
|
|
| T |
46326532 |
cggctttcctgaactctggtactcttggcgccaccagattgcggctctcggatccctcggttaccgtgctgttgctcccgatctccgtggctatggtgac |
46326631 |
T |
|
| Q |
236 |
accgatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttg |
335 |
Q |
| |
|
|| |||| ||| |||| || |||||||||||| || ||| | || ||||| || ||| |||||||||||| || || || || ||||| ||||||| |
|
|
| T |
46326632 |
acagatgttccgtcttccattagcagctacacatgttttcacgtagttggtgacattgtttctctcatcgacttgcttggtgtggaacaagttttccttg |
46326731 |
T |
|
| Q |
336 |
tagctcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
408 |
Q |
| |
|
| | ||||||| ||||||||| |||||||||||||||||| | ||||||||||||| ||||||||| ||||| |
|
|
| T |
46326732 |
ttggtcatgatatgggtgccatcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcctatgt |
46326804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 36 - 408
Target Start/End: Original strand, 46322727 - 46323099
Alignment:
| Q |
36 |
gagagatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttca |
135 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| || ||||||||||||||||| |
|
|
| T |
46322727 |
gagagatggaaggaatagagcacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgttttgttccttca |
46322826 |
T |
|
| Q |
136 |
cggcttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgac |
235 |
Q |
| |
|
|||||| |||||||||||||| || ||||||||||||||||| ||||| ||||| ||||| ||||| || || ||||| ||||| |||||||| || ||| |
|
|
| T |
46322827 |
cggctttcctgaactctggtactcttggcgccaccagattgcggctctcggctctctcggctaccgcgccgtagctccggatctacgtggctatggtgac |
46322926 |
T |
|
| Q |
236 |
accgatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttg |
335 |
Q |
| |
|
|| || ||||| |||||||||||||||||||| || ||| | || |||||| | ||||| || || || | || |||||||| |||||||| |||| |
|
|
| T |
46322927 |
actgaggctccatcttcaataagcagctacacaggttttcacattgtaggtgatctggttgcacttatagatttgcttggcgttgatcaagtgtttcttg |
46323026 |
T |
|
| Q |
336 |
tagctcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
408 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||| ||||||||| ||||| |
|
|
| T |
46323027 |
tagctcatgattggggtgccatcattggttggtacctttgcatgtttcgccctgaaagaatcaaagcctatgt |
46323099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 39 - 408
Target Start/End: Complemental strand, 46517122 - 46516753
Alignment:
| Q |
39 |
agatggaaggaatagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacgg |
138 |
Q |
| |
|
||||||||||| |||| |||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||| ||| | || ||||||||||| || |
|
|
| T |
46517122 |
agatggaaggagtagagcacagaacagtggaagtgaatggaatcaaaatgcatgtcgcagagaaaggaaaagaaggaccaatagtattgttccttcatgg |
46517023 |
T |
|
| Q |
139 |
cttccctgaactctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacacc |
238 |
Q |
| |
|
|| |||||| ||||||| ||||||||||||||||||| ||||| ||||||| || ||||| | || ||||||||||| |||||||||| ||||| |
|
|
| T |
46517022 |
ttttcctgaaatctggtactcatggcgccaccagattgttgctctcagctcccttggctaccgcaccgtggctccagatctctgtggctacggtgacact |
46516923 |
T |
|
| Q |
239 |
gatgctcccgcttcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtag |
338 |
Q |
| |
|
||||||||| ||||| | || ||||||||||| || || ||||| ||||||||||||||||| || |||||||| || || |||||||| |||||||| | |
|
|
| T |
46516922 |
gatgctcccacttcagttagtagctacacaattttacatttggttggtgatatcgttgctctaattgactcactgggtgtggaccaagttttccttgtgg |
46516823 |
T |
|
| Q |
339 |
ctcatgattggggtgccatgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
408 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||||| ||||| ||||| ||| |||| |||||||| |
|
|
| T |
46516822 |
ctcatgattggggtgctatcattggttggtatctttgtttgtttcgtcctgagaaagtcaaggcttatgt |
46516753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 46464985 - 46464839
Alignment:
| Q |
260 |
agctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattggggtgccatga |
359 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||||||||||||| |||||||| || ||||| ||||| || |||| |||||||||||||||||| | | |
|
|
| T |
46464985 |
agctacacaatcttccacttagttggtgacatcgttgctctcatagactcacttggggttgatcaagtcttttttgttgctcatgattggggtgccttaa |
46464886 |
T |
|
| Q |
360 |
ttggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
408 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||| | ||||||| ||||| |
|
|
| T |
46464885 |
ctggttggtatc--tgtttgtttcgtcctgaaagagtcaaagcctatgt |
46464839 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 408
Target Start/End: Original strand, 7475308 - 7475558
Alignment:
| Q |
158 |
tcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccgcttcaataa |
257 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| |||| || || ||| | ||||| |||||||| || ||||||||| |||| ||||||||| |
|
|
| T |
7475308 |
tcatggcgccaccagattatagctctcagctccctcggctaccatgtcgtggctactgatctccgtggctatggtgacaccgattctccatcttcaataa |
7475407 |
T |
|
| Q |
258 |
gcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattggggtgccat |
357 |
Q |
| |
|
||||||||||| || || |||| ||||| | ||||| || || || | || || ||||| |||||||| ||||| |||||||||||||||||||| |
|
|
| T |
7475408 |
gcagctacacagggtttcatatggttggtgaccttgttgcacttatagattttcttggtgttgatcaagtgtttcttgtggctcatgattggggtgccat |
7475507 |
T |
|
| Q |
358 |
gattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgt |
408 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
7475508 |
cattggttggtacctttgcacgtttcgccctgaaagaatcaaagcctatgt |
7475558 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 375
Target Start/End: Complemental strand, 37152194 - 37151873
Alignment:
| Q |
51 |
tagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggcttccctgaact |
150 |
Q |
| |
|
|||| ||||||| || ||||| |||||||| ||||||||| ||||||||||||| |||||||||||| || ||| | | ||||| |||||||| || |
|
|
| T |
37152194 |
tagagcacagaatagtagaagtaaatggcattaaaatgcatgttgcagagaaagg---agaaggtccagtggtgttgatgttgcacggtttccctgagct |
37152098 |
T |
|
| Q |
151 |
ctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccgct |
250 |
Q |
| |
|
||||| || |||||||| |||||| | | | ||||| ||||||||||| || || || |||||||| |||||||| ||||| || ||||| | |
|
|
| T |
37152097 |
atggtactcttggcgccatcagattctggatttgagctccaagggttaccgtgcagtggcccctgatcttcggggctacggtgacactgaagctccagaa |
37151998 |
T |
|
| Q |
251 |
tcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattggg |
350 |
Q |
| |
|
||| | | ||||||||| || ||| | |||||||||||| |||| ||||| ||||| || || || ||| |||||| |||||| | |||||||||| |
|
|
| T |
37151997 |
tcagtgaccagctacacctgttttcaccttgtgggtgatatcattgcactcattgactctctaggggtggacaaagtgtaccttgtcggacatgattggg |
37151898 |
T |
|
| Q |
351 |
gtgccatgattggttggtatctttg |
375 |
Q |
| |
|
|||| || || ||||||||| |||| |
|
|
| T |
37151897 |
gtgcaatcatcggttggtatgtttg |
37151873 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 375
Target Start/End: Original strand, 88036 - 88357
Alignment:
| Q |
51 |
tagaacacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggcttccctgaact |
150 |
Q |
| |
|
|||| ||||||| || ||||| |||||||| ||||||||| ||||||||||||| |||||||||||| || ||| | | ||||| |||||||| || |
|
|
| T |
88036 |
tagagcacagaatagtagaagtaaatggcattaaaatgcatgttgcagagaaagg---agaaggtccagtggtgttgatgttgcacggtttccctgagct |
88132 |
T |
|
| Q |
151 |
ctggtattcatggcgccaccagattgcagctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccgct |
250 |
Q |
| |
|
||||| || |||||||| |||||| | | | ||||| ||||||||||| || || || |||||||| |||||||| ||||| || ||||| | |
|
|
| T |
88133 |
atggtactcttggcgccatcagattctggatttgagctccaagggttaccgtgcagtggcccctgatcttcggggctacggtgacactgaagctccagaa |
88232 |
T |
|
| Q |
251 |
tcaataagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattggg |
350 |
Q |
| |
|
||| | | || |||||| || ||| | |||||||||||| |||| ||||| ||||| || || || ||| |||||| |||||| | |||||||||| |
|
|
| T |
88233 |
tcagtgaccaactacacctgttttcaccttgtgggtgatatcattgcactcattgactctctaggggtggacaaagtgtaccttgtcggacatgattggg |
88332 |
T |
|
| Q |
351 |
gtgccatgattggttggtatctttg |
375 |
Q |
| |
|
|||| || || ||||||||| |||| |
|
|
| T |
88333 |
gtgcaatcatcggttggtatgtttg |
88357 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 49833685 - 49833648
Alignment:
| Q |
137 |
ggcttccctgaactctggtattcatggcgccaccagat |
174 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
49833685 |
ggcttccctgatctatggtattcatggcgccaccagat |
49833648 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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