View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6928_low_4 (Length: 376)

Name: NF6928_low_4
Description: NF6928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6928_low_4
NF6928_low_4
[»] chr4 (34 HSPs)
chr4 (61-246)||(28982730-28982924)
chr4 (63-248)||(35017733-35017926)
chr4 (61-246)||(1771174-1771368)
chr4 (61-247)||(25051691-25051886)
chr4 (61-247)||(33703139-33703334)
chr4 (60-246)||(23035977-23036172)
chr4 (65-246)||(43735744-43735934)
chr4 (265-362)||(16902662-16902755)
chr4 (265-362)||(18351322-18351415)
chr4 (63-246)||(27550309-27550501)
chr4 (60-246)||(27864561-27864756)
chr4 (60-246)||(55966254-55966449)
chr4 (63-247)||(12496956-12497149)
chr4 (65-249)||(43514591-43514784)
chr4 (66-249)||(23204683-23204875)
chr4 (65-246)||(27893750-27893940)
chr4 (141-246)||(51512173-51512278)
chr4 (62-246)||(21687005-21687198)
chr4 (101-246)||(43949709-43949863)
chr4 (63-246)||(27316620-27316813)
chr4 (62-240)||(48463364-48463551)
chr4 (65-246)||(31680904-31681094)
chr4 (101-228)||(39631139-39631275)
chr4 (141-240)||(41848058-41848157)
chr4 (141-240)||(45490227-45490326)
chr4 (141-206)||(46412417-46412482)
chr4 (63-135)||(55272404-55272476)
chr4 (61-135)||(711958-712032)
chr4 (62-120)||(32728356-32728414)
chr4 (63-135)||(17619180-17619252)
chr4 (57-195)||(28988467-28988614)
chr4 (174-249)||(55272281-55272356)
chr4 (65-135)||(3756274-3756344)
chr4 (174-246)||(19880074-19880146)
[»] chr1 (19 HSPs)
chr1 (60-247)||(5489773-5489969)
chr1 (63-252)||(43570988-43571186)
chr1 (59-246)||(24769407-24769603)
chr1 (61-248)||(48498868-48499064)
chr1 (65-246)||(7447828-7448017)
chr1 (141-246)||(50448168-50448273)
chr1 (63-245)||(37814778-37814969)
chr1 (57-246)||(750213-750411)
chr1 (101-246)||(4401366-4401520)
chr1 (105-246)||(4888085-4888234)
chr1 (59-246)||(23989431-23989628)
chr1 (65-246)||(2497470-2497660)
chr1 (63-135)||(46168383-46168455)
chr1 (61-135)||(44112675-44112749)
chr1 (63-135)||(38335918-38335990)
chr1 (63-135)||(48119628-48119700)
chr1 (61-135)||(45639760-45639834)
chr1 (63-135)||(35003294-35003366)
chr1 (62-135)||(41065152-41065225)
[»] chr3 (26 HSPs)
chr3 (61-248)||(40808863-40809059)
chr3 (60-246)||(46941050-46941245)
chr3 (53-255)||(24688301-24688512)
chr3 (64-246)||(40480750-40480941)
chr3 (64-248)||(54237097-54237290)
chr3 (64-246)||(42394327-42394518)
chr3 (65-259)||(53581753-53581956)
chr3 (63-248)||(42100688-42100882)
chr3 (65-252)||(1078229-1078416)
chr3 (63-246)||(36150130-36150322)
chr3 (60-246)||(54246056-54246251)
chr3 (61-246)||(47190934-47191127)
chr3 (62-246)||(25413680-25413873)
chr3 (54-250)||(45126832-45127037)
chr3 (141-246)||(52629915-52630020)
chr3 (55-252)||(53273595-53273792)
chr3 (146-247)||(27748655-27748747)
chr3 (54-135)||(52628005-52628086)
chr3 (60-135)||(4190293-4190368)
chr3 (60-135)||(9434121-9434196)
chr3 (61-135)||(10457920-10457994)
chr3 (156-246)||(29556867-29556956)
chr3 (62-135)||(25996267-25996340)
chr3 (174-246)||(10457800-10457872)
chr3 (174-248)||(9434244-9434318)
chr3 (184-226)||(19148898-19148940)
[»] chr8 (25 HSPs)
chr8 (60-246)||(36743391-36743586)
chr8 (60-246)||(30660650-30660845)
chr8 (62-248)||(31384663-31384858)
chr8 (63-241)||(29705362-29705549)
chr8 (63-246)||(11582766-11582958)
chr8 (265-362)||(9231173-9231266)
chr8 (62-247)||(2546995-2547189)
chr8 (63-242)||(2165875-2166063)
chr8 (62-245)||(42197344-42197536)
chr8 (57-223)||(5754897-5755072)
chr8 (65-246)||(30912470-30912660)
chr8 (60-249)||(42295192-42295389)
chr8 (141-250)||(9241639-9241748)
chr8 (65-240)||(29800864-29801048)
chr8 (64-246)||(45397317-45397507)
chr8 (65-246)||(20148762-20148952)
chr8 (141-247)||(3743858-3743964)
chr8 (65-245)||(26125637-26125825)
chr8 (63-246)||(1375542-1375734)
chr8 (141-259)||(40528529-40528647)
chr8 (62-135)||(18066746-18066819)
chr8 (61-135)||(34304786-34304860)
chr8 (59-135)||(35181512-35181588)
chr8 (65-138)||(42699259-42699332)
chr8 (174-246)||(34304908-34304979)
[»] chr6 (20 HSPs)
chr6 (63-245)||(30014343-30014534)
chr6 (62-246)||(21279928-21280121)
chr6 (59-246)||(7273243-7273439)
chr6 (65-247)||(24203894-24204085)
chr6 (57-243)||(7367543-7367738)
chr6 (62-246)||(9698241-9698434)
chr6 (65-247)||(30735984-30736175)
chr6 (55-255)||(3213392-3213601)
chr6 (63-245)||(13743130-13743321)
chr6 (63-245)||(13748630-13748821)
chr6 (60-246)||(26466796-26466991)
chr6 (60-240)||(26669923-26670112)
chr6 (265-362)||(7999612-7999705)
chr6 (60-240)||(7292744-7292933)
chr6 (62-246)||(21293585-21293778)
chr6 (65-135)||(27441544-27441614)
chr6 (57-131)||(31109254-31109328)
chr6 (61-135)||(33242401-33242475)
chr6 (189-246)||(33254049-33254106)
chr6 (174-246)||(33242523-33242595)
[»] chr2 (30 HSPs)
chr2 (62-246)||(30838631-30838824)
chr2 (61-249)||(43335668-43335865)
chr2 (60-246)||(4764634-4764829)
chr2 (64-246)||(19047158-19047349)
chr2 (59-242)||(12302165-12302357)
chr2 (63-248)||(16096747-16096942)
chr2 (65-246)||(43490309-43490499)
chr2 (152-245)||(42849768-42849861)
chr2 (63-246)||(1750414-1750606)
chr2 (265-316)||(30242150-30242201)
chr2 (57-135)||(43114551-43114629)
chr2 (61-131)||(16803966-16804036)
chr2 (61-131)||(16843248-16843318)
chr2 (101-246)||(39149202-39149354)
chr2 (65-135)||(11825682-11825752)
chr2 (184-247)||(12415367-12415430)
chr2 (63-135)||(12415488-12415560)
chr2 (184-247)||(12427427-12427490)
chr2 (63-135)||(12427548-12427620)
chr2 (61-120)||(966877-966936)
chr2 (57-135)||(18491699-18491777)
chr2 (65-138)||(33229303-33229377)
chr2 (65-131)||(41282006-41282072)
chr2 (152-241)||(42026867-42026956)
chr2 (174-255)||(43114677-43114758)
chr2 (141-246)||(34817684-34817789)
chr2 (174-250)||(966738-966814)
chr2 (139-195)||(8896542-8896598)
chr2 (174-246)||(11825562-11825634)
chr2 (174-246)||(34895649-34895721)
[»] chr7 (29 HSPs)
chr7 (65-248)||(43343530-43343722)
chr7 (65-246)||(44416842-44417032)
chr7 (62-242)||(9216301-9216489)
chr7 (63-246)||(42972852-42973044)
chr7 (63-247)||(42538338-42538531)
chr7 (63-246)||(24000920-24001112)
chr7 (60-240)||(5015392-5015581)
chr7 (141-246)||(16180265-16180370)
chr7 (101-250)||(32029721-32029879)
chr7 (63-246)||(5810832-5811024)
chr7 (66-252)||(26898304-26898499)
chr7 (62-246)||(35069720-35069913)
chr7 (61-246)||(41861672-41861868)
chr7 (65-246)||(10573751-10573941)
chr7 (65-246)||(44326180-44326370)
chr7 (63-251)||(45326020-45326217)
chr7 (146-228)||(38160505-38160587)
chr7 (83-243)||(27393171-27393340)
chr7 (57-196)||(24280554-24280702)
chr7 (14-62)||(46479341-46479389)
chr7 (65-246)||(4638107-4638297)
chr7 (59-135)||(40236915-40236991)
chr7 (64-135)||(31408661-31408732)
chr7 (63-130)||(39998408-39998475)
chr7 (62-249)||(43317442-43317638)
chr7 (177-246)||(47279632-47279701)
chr7 (174-246)||(27535139-27535211)
chr7 (63-135)||(31513287-31513359)
chr7 (174-246)||(40237039-40237111)
[»] scaffold0187 (2 HSPs)
scaffold0187 (62-247)||(14096-14289)
scaffold0187 (62-247)||(24424-24617)
[»] chr5 (18 HSPs)
chr5 (65-252)||(25914898-25915085)
chr5 (63-246)||(2614557-2614749)
chr5 (55-251)||(7617125-7617330)
chr5 (61-249)||(18033980-18034177)
chr5 (57-221)||(22512299-22512472)
chr5 (63-247)||(41334570-41334763)
chr5 (61-246)||(33801467-33801661)
chr5 (265-362)||(40808136-40808229)
chr5 (59-246)||(5256991-5257187)
chr5 (265-362)||(2914748-2914841)
chr5 (61-240)||(38470577-38470765)
chr5 (140-246)||(39122264-39122370)
chr5 (63-140)||(33855066-33855143)
chr5 (146-221)||(39122366-39122441)
chr5 (60-135)||(30622747-30622821)
chr5 (63-135)||(32473422-32473494)
chr5 (174-247)||(30622626-30622699)
chr5 (174-250)||(32473298-32473374)
[»] scaffold0038 (1 HSPs)
scaffold0038 (64-246)||(112656-112847)
[»] scaffold0157 (1 HSPs)
scaffold0157 (63-247)||(23328-23521)
[»] scaffold0119 (1 HSPs)
scaffold0119 (60-240)||(682-871)
[»] scaffold0385 (1 HSPs)
scaffold0385 (61-247)||(11249-11444)
[»] scaffold0689 (1 HSPs)
scaffold0689 (268-320)||(1757-1809)
[»] scaffold0003 (1 HSPs)
scaffold0003 (65-135)||(45747-45817)


Alignment Details
Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 28982924 - 28982730
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||||||||||||| ||||||||  || | ||||||||||||||||| ||||||| |||||||||||||||         | | || ||||||    
T  28982924 aaggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaaccgcactttatc 28982825  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  28982824 ttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactc 28982730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 63 - 248
Target Start/End: Original strand, 35017733 - 35017926
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||||| ||||||||| ||| |||||||||||||||         | |||| ||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgtat-agggatattttggtaagttcatctcacaaccacactttatctt 35017831  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||    
T  35017832 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaagatgtattgccacatggggtggtacatgtatcatcactcat 35017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 1771368 - 1771174
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||||||||||||| ||||||||| || | || |||||||| ||||||||||||  |||||||| ||||||         | |||||||||||    
T  1771368 aaggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaaccacattttatc 1771269  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  1771268 ttctatttatgtggggtccaagttgccacgtctcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 1771174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 25051691 - 25051886
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||| |||||||||  |||||||| || | || |||||||| || |||||||||| |||||||||||||||         |||||| ||||||    
T  25051691 aaggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatc 25051790  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||    
T  25051791 ttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaatgatgtattgccacgtggggtggtacatgtatcatcactca 25051886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 33703139 - 33703334
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||||||||||||| ||||||||  || ||| ||||||||| ||||||||||||| |||||||||||||||         | |||| ||||||    
T  33703139 aaggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 33703238  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    ||||||||||| ||| | ||||||||||||| |||||||||||||||| | |||| |||||||||||| |||||||| ||||||||||||||||||    
T  33703239 ttctatttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactca 33703334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 23035977 - 23036172
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    ||||||||||||||||||||| |||||||||| || | ||||||||||| || || ||||||| ||||||| |||||||         | |||| |||||    
T  23035977 aaaggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttat 23036076  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||| |||||||| || |||||||||| |||||||||||||||| | |||| | ||| ||||||||||||||| |||||||||||||||||    
T  23036077 cttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtgttgccacatggggtggtacatgtatcatcactc 23036172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 43735744 - 43735934
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||| ||||||||||||||||||||| || |||  ||| ||||| |||||||||||  |||||||| ||||||         |||||| ||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcacaatcacactttatcttct 43735843  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||| | ||||||| ||||| |||||||||| ||||||| |||| ||||||||||||| ||||||| |||||||||||||||||    
T  43735844 atttgtgtgggatccaagttgtcacgtgtcagaattttatgtggatgtaaagggtgtattgccacgtggggtggtacatgtatcatcactc 43735934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 16902755 - 16902662
Alignment:
Q  265 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcctgtctgtctgggtaagtaacaattgtattatatat 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||||||    
T  16902755 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcc----tgtccgggtaagtaacaattgtattatatat 16902662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 18351415 - 18351322
Alignment:
Q  265 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcctgtctgtctgggtaagtaacaattgtattatatat 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||||||    
T  18351415 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcc----tgtccgggtaagtaacaattgtattatatat 18351322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 27550309 - 27550501
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||  || |  | |||||||| | ||||||||||| |||||||||||||||         | |||| ||||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||| |||||||| || |||||||||| |||||||||||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  27550409 ctatttatgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 27550501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 27864561 - 27864756
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    ||||||||||||||||| |||| | ||||||| || |||| |||||||| ||||||||||||| |||||||||||||||         | |||| |||||    
T  27864561 aaaggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 27864660  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
     |||||||| |||||||||||  || |||| | |||||||||| ||||||| |||| ||||||||||||||||||||| ||||||||||| |||||    
T  27864661 tttctatttatgtggggttcagattaccacatgtcagaattttatgtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 27864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 55966449 - 55966254
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    ||||||||||||||||| |||| ||||||||| || |||| |||||||||||||||||||||| |||||||||||||||         | |||| |||||    
T  55966449 aaaggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacaatttat 55966350  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||| ||||||||  |  ||||||| | |||||||||| ||||| | |||| ||||||||||||||||| ||| ||||||||||| |||||    
T  55966349 cttctatttatgtggggtctagattgccacctgtcagaattttatgtgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 55966254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 63 - 247
Target Start/End: Original strand, 12496956 - 12497149
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||| ||||||| ||||||||| || |  | |||||||||||||||||||||  |||||||||||||||         |||||| ||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 12497055  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||| | ||||  |||||||| ||||||||||| | |||||||||| |||||    
T  12497056 ctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtcacatggggtggtgcatgtatcattactca 12497149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 249
Target Start/End: Complemental strand, 43514784 - 43514591
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||| ||||||||| || |  | ||||||||   |||||||||||  ||||||||||||||         | ||||  |||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaaccacaccttatcttct 43514685  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcata 249  Q
    |||||||||||||  | |||||||||| |||||||||| ||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||    
T  43514684 atttgtgtggggtctaggttgccacgtgtcagaattttttgtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactcata 43514591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 23204875 - 23204683
Alignment:
Q  66 aaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttcta 156  Q
    ||||||||||||||||  |||||||| || |||| ||||||||||| |||||||||| ||||||| |||||||         | |||| |||||||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatcttcta 23204776  T
Q  157 tttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcata 249  Q
    ||| |||||||| || |||||||| | |||||||||| ||||| | |||| | | |||||||||||||| || ||| ||||||||||||||||    
T  23204775 tttatgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaaggatatattgccacatgggatggtacgtgtatcatcactcata 23204683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 27893940 - 27893750
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||| |||| | ||||||| || |||| |||||||| ||||||||||||| |||||||||||| ||         | |||| ||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttct 27893841  T
Q  156 atttgtgtggggttcaag-ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| |||||||| |||| ||||||| | |||||||||| ||||| | |||| ||||||||||||||||||||| ||||||||||| |||||    
T  27893840 atttatgtggggt-caagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 27893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 51512278 - 51512173
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| |||||||| |||||||||||||| || |||||||||| |||||||||||||||| ||| || | ||||||||||| ||||||| |||||||||||    
T  51512278 cacactttatcttttatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtattaaagatgtattgccacgtggggtggtacatgtatca 51512179  T
Q  241 tcactc 246  Q
    ||||||    
T  51512178 tcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 21687005 - 21687198
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt-atcacat--------tttatct 152  Q
    ||||||||||||||||||||||||||||| ||| | || ||| ||||||  |||||||||  ||||||| ||||||| ||| |||        |||||||    
T  21687005 aggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctcataaccatactttatct 21687104  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||| ||| ||||| |||||||||| ||||||||||||||| || ||||   ||||||||||||| || || ||||| |||||||||||    
T  21687105 tctatttgtctggagttcaggttgccacgtgtcagaattttgtgtgaatgtaaagaatgtattgccacataggttggtacatatatcatcactc 21687198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 43949863 - 43949709
Alignment:
Q  101 attgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttctatttgtgtggggttcaagttgccacgtatcagaatt 191  Q
    |||||||| ||||||||||||| |||||||||||||||         | |||| ||||||||||||||||| ||| | |||  |||||||| ||||||||    
T  43949863 attgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaatatgccacgtgtcagaatt 43949764  T
Q  192 ttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| ||| |||||| |||||||||||| || ||||| |||||||||||||||||    
T  43949763 ttgtatgggtataaagggtgtattgccaaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 63 - 246
Target Start/End: Complemental strand, 27316813 - 27316620
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||| | ||||| ||||||||| || | |  ||| |||| ||||||||||| | |||||||||||||||         | |||| ||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatctt 27316714  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaatttt-gtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||| | ||| || ||||||||||||| |||||||||| |||||||| |||| ||||||||| |||||||| ||||| ||||||||||||||    
T  27316713 ctatttatttggagtccaagttgccacgtgtcagaatttttgtgtggatgtaaagggtgtattgtcacatgggatgataaatgtatcatcactc 27316620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 48463551 - 48463364
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    ||||||||||||||| |||| | ||||||| || ||   |||||||||||||||||||||| |||||||||||||||         | || | ||||| |    
T  48463551 aggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttattt 48463452  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    ||||||| |||||||||||  || |||| | |||||||||| ||||| | |||| ||||||||||||||| | ||| |||||||||||    
T  48463451 tctatttatgtggggttcagattaccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatagagtggtacatgtatca 48463364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 31680904 - 31681094
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||| | |||| | ||||||| || || | |||||||| ||| | ||||||| |||||||||||||||         | |||| ||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatcttct 31681003  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| ||||||||| |  ||||||||| |||||||||| ||| | | |||| |||||||||||||||||| || ||||||||||| |||||    
T  31681004 atttatgtggggtttagattgccacgtgtcagaattttatgtaggtgtaaagggtgtattgccacatgggatgctacatgtatcaccactc 31681094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 39631139 - 39631275
Alignment:
Q  101 attgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttctatttgtgtggggttcaagttgccacgtatcagaatt 191  Q
    |||||||| | ||||||||||| |||||||||||||||         | |||| |||||||||||||||||||||||||||  || ||||| ||||||||    
T  39631139 attgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggttcaatatgtcacgtgtcagaatt 39631238  T
Q  192 ttgtgtggatataaatggtgtattgccacatggggtg 228  Q
    |||||||| | |||| | ||||||| |||||||||||    
T  39631239 ttgtgtgggtgtaaaggatgtattgtcacatggggtg 39631275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 41848058 - 41848157
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| ||| ||||||||||||||||||||||  ||| ||| | ||||||||||| |||||| |||  |||||||||||||||||||   |||||||||||    
T  41848058 cacactttctcttctatttgtgtggggttcagattgtcacatgtcagaattttgcgtggatgtaaggggtgtattgccacatgggggtgtacatgtatca 41848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 45490326 - 45490227
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| ||||||||||||||||  ||| | || |||||||||| ||||||| |||||||| | |||||| | ||||||||||| ||||  |||||||||||    
T  45490326 cacactttatcttctatttgtacgggatccaggttgccacgtgtcagaatcttgtgtgggtgtaaatgatatattgccacatagggtactacatgtatca 45490227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 46412482 - 46412417
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaa 206  Q
    |||| |||||||||||||| ||||||||| || ||||||||| |||||||||||||| ||| ||||    
T  46412482 cacactttatcttctatttatgtggggtttaaattgccacgtgtcagaattttgtgtagatgtaaa 46412417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 55272476 - 55272404
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||||||||| || || |  |||||||||| |||||| |||| | ||||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaa 55272404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 711958 - 712032
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||| |||||| || || | ||||||||||| || ||| |||| | ||||||||||||    
T  711958 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaa 712032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 32728356 - 32728414
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtatta 120  Q
    ||||||||||||||||||||||||||| || || | ||||||||||| |||||| ||||    
T  32728356 aggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 32728414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 17619252 - 17619180
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| | |||| || || | ||||||||||| |||||| |||| | ||||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaa 17619180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 28988467 - 28988614
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattt 147  Q
    ||||||||||||||||||||||||| ||||||||| || | |  |||||||| |||||| | |||| | |||||| ||| ||         | |||| ||    
T  28988467 tttaaaggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactt 28988566  T
Q  148 tatcttctatttgtgtggggttcaagttgccacgtatcagaattttgt 195  Q
    | ||||||||||||||||||| || |||||||  | ||||||||||||    
T  28988567 tctcttctatttgtgtggggtccaggttgccatatgtcagaattttgt 28988614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 55272356 - 55272281
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcata 249  Q
    ||||||| | |||| ||||||||||| | |||  |||||||||||||||||||   ||||||||||| ||||||||    
T  55272356 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcata 55272281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 3756344 - 3756274
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||| |||||| || || | ||||||||||| |||||| |||| | ||||||| ||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaa 3756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 19880074 - 19880146
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||| ||||||||||| | |||  |||||||||||||||||||   ||||||||||| |||||    
T  19880074 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 19880146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 6e-50; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 60 - 247
Target Start/End: Original strand, 5489773 - 5489969
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| |||||    
T  5489773 aaaggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 5489872  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||| | |||| ||||||||||||||||||||| ||||||||||||||||||    
T  5489873 cttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactca 5489969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 43571186 - 43570988
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || | |  |||||||| ||||||||||||| |||||||||||||||         | |||| ||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43571087  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatattt 252  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||| | |||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  43571086 ctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatatatcatcactcatattt 43570988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 24769603 - 24769407
Alignment:
Q  59 taaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagttat---------cacatttta 149  Q
    |||||||||||||| |||||||| | ||||||  || |  | |||||||| ||||||||||||| ||||||||||||||| |         |||| ||||    
T  24769603 taaaggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacacttta 24769504  T
Q  150 tcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||    
T  24769503 tcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactc 24769407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 248
Target Start/End: Complemental strand, 48499064 - 48498868
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    |||||||||||||||||||||  |||||||  || |  | |||||||| | ||||||||||| |||||||||||||||         | |||| ||||||    
T  48499064 aaggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatc 48498965  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||| | |||| ||||||||||||||||||||| |||||||||||||||||||    
T  48498964 ttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcat 48498868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 7447828 - 7448017
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||||||||||||| || |||| |||||||| |||||||||||   |||||||| ||||||         | |||| ||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcacaaccacactttatcttct 7447926  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| | |||| |||||||||||||||||  || |||||||||||||||||    
T  7447927 atttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggaatggtacatgtatcatcactc 7448017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 50448273 - 50448168
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    ||||||||||||||||||| |||||| | || |||||||||| |||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||    
T  50448273 cacattttatcttctatttttgtgggttccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatca 50448174  T
Q  241 tcactc 246  Q
    ||||||    
T  50448173 tcactc 50448168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 63 - 245
Target Start/End: Original strand, 37814778 - 37814969
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    |||||||||||||| |||| ||||||||| || |||  |||||||| ||||||||||| | |||||||||||| ||         | |||| ||||||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    |||||| |||||||| ||  ||||||||| |||||||||| | ||||| |||| ||||||||||||||||||||| ||||||||||| ||||    
T  37814878 ctatttatgtggggtccagattgccacgtgtcagaattttatatggatgtaaagggtgtattgccacatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 246
Target Start/End: Complemental strand, 750411 - 750213
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattt 147  Q
    |||| ||||||||||||| |||||| ||||  ||| || | || |||||||| ||||||||| ||| |||||||| ||| ||         | |||| ||    
T  750411 tttataggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactt 750312  T
Q  148 tatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||||| | |||| |||||||||||||||||| || |||||||||||||||||    
T  750311 tatcttctatttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 750213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 101 - 246
Target Start/End: Original strand, 4401366 - 4401520
Alignment:
Q  101 attgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttctatttgtgtggggttcaagttgccacgtatcagaatt 191  Q
    |||||||| ||||||||||||  |||||||||||||||         | |||| ||||||||||||||||||||||| |||  |||||||| ||||||||    
T  4401366 attgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaatatgccacgtgtcagaatt 4401465  T
Q  192 ttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||| | |||| ||||||||||||||| ||||| |||||||||||||||||    
T  4401466 ttgtgtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactc 4401520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 4888085 - 4888234
Alignment:
Q  105 tacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgt 195  Q
    |||||||||||||||||| |||||||||||||||         | |||| ||||| |||||||||||||| || ||| |||||| |||||||||||||||    
T  4888085 tacatcccatgtattagggatattttggtaagtttatctcacaaccacactttattttctatttgtgtggtgtccaaattgccatgtatcagaattttgt 4888184  T
Q  196 gtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||| |||| | | ||||||||||| ||||| |||||||||||||||||    
T  4888185 gtggatgtaaaggatatattgccacat-gggtggtacatgtatcatcactc 4888234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 23989628 - 23989431
Alignment:
Q  59 taaaggaaaatgttacatgaacatccttt-attcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacatttt 148  Q
    ||||||||||||||||||||||| ||||| |||| || |  | |||||| | || |||||||||| |||||||||||| ||         | |||| |||    
T  23989628 taaaggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacacttt 23989529  T
Q  149 atcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||||||| || |||||||| | ||||||| |||||||| | |||| |||||||||||| || ||||| ||||||||||| |||||    
T  23989528 atcttctatttgtgtggggtccaggttgccacatgtcagaatcttgtgtgggtgtaaagggtgtattgccatatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 2497660 - 2497470
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||| |||| | ||||||| || || | |||||||| ||||| ||||| | |||||||||||||||         | |||| |||||| |||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacactttatcatct 2497561  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| |||||| | ||  ||| ||||| |||||||||| ||||| |||||| ||||||||||||||||| ||| ||||||||||| |||||    
T  2497560 atttatgtgggatccagattgtcacgtgtcagaattttatgtgggtataaagggtgtattgccacatggtgtggtacatgtatcaccactc 2497470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 46168383 - 46168455
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| |||||| || |||||||||||||||| || ||| |||| | ||||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaa 46168455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 44112675 - 44112749
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||| |||||| || || | ||||||||||| |||||| |||||| | ||||||||||    
T  44112675 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 44112749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 38335918 - 38335990
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| |||||| || || | | |||||||||||||||| |||| | ||||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaa 38335990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 48119628 - 48119700
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| |||||| || || | ||||||||||| |||||| |||| | ||||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaa 48119700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 45639834 - 45639760
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||||  ||||| || || ||||||||||||| |||||  |||| | ||||||||||||    
T  45639834 aaggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaa 45639760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 35003294 - 35003366
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| |||||| || || | ||||||||||| |||||  |||| | ||||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaa 35003366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 41065152 - 41065225
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||| |||||| || || | ||| ||||||| |||||| ||||||   ||||||||||    
T  41065152 aggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaa 41065225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 248
Target Start/End: Original strand, 40808863 - 40809059
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    |||||||||||||||| |||| | ||||||| || | || |||||||| ||||||||||||| |||||||||||||||         | |||| ||||||    
T  40808863 aaggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 40808962  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  40808963 ttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactcat 40809059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 46941050 - 46941245
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||||||||| ||||||||| || |||  |||||||| ||||||||||||| |||||||||||||||         | |||| |||||    
T  46941050 aaaggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 46941149  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||| | ||||  |||||||||||||||||||| |||||||||||||||||    
T  46941150 cttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactc 46941245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 53 - 255
Target Start/End: Complemental strand, 24688512 - 24688301
Alignment:
Q  53 gatatttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcac 143  Q
    ||||| ||||||||||||||||||||||| ||||||||  || |  | |||||||| || |||||||||| |||||||||||||||         | |||    
T  24688512 gatatctaaaggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccac 24688413  T
Q  144 attttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatca 243  Q
    | |||||||||||||| |||||||| || |||||||||| ||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||    
T  24688412 actttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggggtaaatggtgtattgccacatggggtggtacatgtatcatca 24688313  T
Q  244 ctcatatttaaa 255  Q
    ||||||| ||||    
T  24688312 ctcatatctaaa 24688301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 40480750 - 40480941
Alignment:
Q  64 gaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttc 154  Q
    |||||||||||||||||| ||||||||| |||  || ||||||||||| |||||||||| |||||||||||||||         | |||| |||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 40480849  T
Q  155 tatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||| |||| || |||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||    
T  40480850 tatttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccgcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 64 - 248
Target Start/End: Original strand, 54237097 - 54237290
Alignment:
Q  64 gaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttc 154  Q
    |||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| |||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 54237196  T
Q  155 tatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
    |||||||||||||| ||  ||||||||| ||||||| |||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||||    
T  54237197 tatttgtgtggggtccagattgccacgtgtcagaatattgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcat 54237290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 42394518 - 42394327
Alignment:
Q  64 gaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttc 154  Q
    |||||||||||||||||| ||||||||| || || | |||||||| || |||||||||| |||||||||||||||         | |||| |||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 42394419  T
Q  155 tatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||| ||  ||||||||| ||| |||||||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  42394418 tatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 42394327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 65 - 259
Target Start/End: Complemental strand, 53581956 - 53581753
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||||||||  |||||||| || |  | ||||||||||| |||||||||| |||||||| ||||||         | |||| ||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatcttct 53581857  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatatttaaa 255  Q
    ||||||||||||| || |||||||||| |||||||||||||||| | |||| ||||||||||||||| ||||| |||| |||||||||||||||| || |    
T  53581856 atttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacaggtatcatcactcatatatata 53581757  T
Q  256 tata 259  Q
    ||||    
T  53581756 tata 53581753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 63 - 248
Target Start/End: Original strand, 42100688 - 42100882
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || | |  |||||||| ||||||||||||| |||||||||||||||         | |||||||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42100787  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
     ||||||||||| ||||| |||||||||| |||||||||| ||||| | |||| |||| ||||||||||| |||| ||||||||| |||||||||    
T  42100788 ttatttgtgtggagttcaggttgccacgtgtcagaattttatgtgggtgtaaagggtgcattgccacatgaggtggtacatgtatgatcactcat 42100882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 252
Target Start/End: Original strand, 1078229 - 1078416
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt-atcacattttatcttctatttgtgt 163  Q
    ||||||||||||||||| ||||||||| |  | |  |||||||| |  |||||||||| ||||||| ||| ||| ||| ||   ||||||||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtattagg-atatttttgtaggttcatctcacaatatcttctatttgtgt 1078327  T
Q  164 ggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatattt 252  Q
    || ||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||||||| |||||    
T  1078328 ggagttcaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactcttattt 1078416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 36150130 - 36150322
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||| | ||||||||| || | || ||| |||| || |||||| ||| |||||||||||||||         | |||| ||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatctt 36150229  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||| || || |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||    
T  36150230 ctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 36150322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 54246251 - 54246056
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||||||||| ||||||||| || | || |||||||| || |||||||||  ||||||| |||||||         | |||| |||||    
T  54246251 aaaggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttat 54246152  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||||| || |||||||| | |||||||||| ||||| | ||||   ||||||||||||||||||| |||||||||||||||||    
T  54246151 cttctatttgtgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaagaatgtattgccacatggggtggtacatgtatcatcactc 54246056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 47191127 - 47190934
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||||||||||||| ||||||||| || | |  |||||||| ||||||||||||  |||||||| ||||||         | |||| ||||||    
T  47191127 aaggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcacaaccacactttatc 47191029  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||||| |||||| |||| | |||||||||||||||| | |||| |||||||||||||||||  || |||||||||||||||||    
T  47191028 ttctatttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgtaaagggtgtattgccacatggaatggtacatgtatcatcactc 47190934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 25413680 - 25413873
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| ||||||||| || | || |||||||| |  |||||||||| ||||||| |||||||         | |||| |||||||    
T  25413680 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatct 25413779  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||| || ||| |||||| ||||| |||||||||| | |||| ||||||||| || |||||||| |||||||||||||||||    
T  25413780 tctatttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaagggtgtattgtcatatggggtggtacatgtatcatcactc 25413873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 45127037 - 45126832
Alignment:
Q  54 atatttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcaca 144  Q
    |||| ||| |||||||||||||| |||| ||||||||| || |||| |||||||| ||||||||||||| |||||||||||||||         | ||||    
T  45127037 atatctaatggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccaca 45126938  T
Q  145 ttttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcac 244  Q
     ||||| |||||||| |||||||| ||  || |||| |  ||||||||| ||||| | |||| ||||||||||||||||| ||| ||||||||||| |||    
T  45126937 ctttattttctatttatgtggggtccagattaccacatgccagaattttatgtgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccac 45126838  T
Q  245 tcatat 250  Q
    ||||||    
T  45126837 tcatat 45126832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 52629915 - 52630020
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| |||||||||||||| ||| |||| || ||||| |||| |||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||    
T  52629915 cacactttatcttctatttatgtagggtccaggttgctacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatca 52630014  T
Q  241 tcactc 246  Q
    ||||||    
T  52630015 tcactc 52630020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 55 - 252
Target Start/End: Complemental strand, 53273792 - 53273595
Alignment:
Q  55 tatttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacat 145  Q
    ||||| ||||||||||||| ||||||||| ||||||| |||| |  |||||||||||||||||||||| |||||||||||||||         | || |     
T  53273792 tattttaaggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatac 53273693  T
Q  146 tttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    |||||||| ||||| |||||| | || ||| |||||||||||||||||||||          |||||||||||||||||| || ||||||||||||||||    
T  53273692 tttatcttttatttatgtgggatccaggttaccacgtatcagaattttgtgt---------aggtgtattgccacatgggatggtacatgtatcatcact 53273602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 27748655 - 27748747
Alignment:
Q  146 tttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    ||||||||||||||||||||||| || |||||||| | ||||||||||||||          ||||||||||||||||||||| ||||||||||| ||||    
T  27748655 tttatcttctatttgtgtggggtccaggttgccacatgtcagaattttgtgt---------cggtgtattgccacatggggtggtacatgtatcaccact 27748745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 52628086 - 52628005
Alignment:
Q  54 atatttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||| |||||||||||||| |||||| |||||| || || ||||||||||||| | |||| |||| ||||||||||||||    
T  52628086 atatttgaaggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaa 52628005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 4190368 - 4190293
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||||| |||||| || || | ||||||||||| |  |||||||||  ||||||||||||    
T  4190368 aaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaa 4190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 9434121 - 9434196
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||||| |||||| || || |  |||||||||| |||||| |||||| | ||||||||||    
T  9434121 aaaggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaa 9434196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 10457994 - 10457920
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||| | |||| || || | ||||||||||| |||||| |||| | ||||||||||||    
T  10457994 aaggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaa 10457920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 29556956 - 29556867
Alignment:
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||| |||||||| | ||||| |||| | ||| | ||||| |||||||||||||||  ||| ||||||||||| |||||    
T  29556956 atttgtgtggggttcaggttgccacatgtcaga-ttttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactc 29556867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 25996267 - 25996340
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||| |||||| || || ||| ||||||||| ||||| ||||| | | ||||||||||    
T  25996267 aggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaa 25996340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 10457872 - 10457800
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||| ||||||||||||| |||  |||||||||||||||| ||  |||||||||||| |||||    
T  10457872 ttgccacatgtcaggattttgtgtggatgtaagaggtgtattgccacatgagggtatacatgtatcaacactc 10457800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 9434244 - 9434318
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggg-gtgatacatgtatcatcactcat 248  Q
    ||||||| | |||||||||||||||| | |||  |||||||||||||||||| ||| ||||||||||| |||||||    
T  9434244 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgggagtg-tacatgtatcaccactcat 9434318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 19148898 - 19148940
Alignment:
Q  184 tcagaattttgtgtggatataaatggtgtattgccacatgggg 226  Q
    |||||||||||||||| | ||| ||||||||||||||||||||    
T  19148898 tcagaattttgtgtgggtgtaagtggtgtattgccacatgggg 19148940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 5e-47; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 36743586 - 36743391
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| |||||    
T  36743586 aaaggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 36743487  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||||| ||  ||||||||| |||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  36743486 cttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 36743391  T

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Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 30660845 - 30660650
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||||||||| ||||||||  || |||| |||||||| || |||||||||| |||||||||||||||         | |||| |||||    
T  30660845 aaaggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttat 30660746  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||||| || |||||||||| |||||||||| ||||||| |||| ||||||||||||||| || ||||||||||||||||||||    
T  30660745 cttctatttgtgtggggtccaggttgccacgtgtcagaattttatgtggatgtaaagggtgtattgccacataggatgatacatgtatcatcactc 30660650  T

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Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 62 - 248
Target Start/End: Original strand, 31384663 - 31384858
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||| | ||||||||||| |||||||||||| || |||||||||| ||||||||||||| |||||||||||||||         | |||| |||||||    
T  31384663 aggaaagtattacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatct 31384762  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
    |||||||||||||||| || ||||| |||| |||||||||| ||||||| |||| ||| ||||||||||||||||| ||||| |||||||||||||    
T  31384763 tctatttgtgtggggtccaggttgctacgtgtcagaattttatgtggatgtaaagggtatattgccacatggggtggtacatatatcatcactcat 31384858  T

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Target: chr8; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 29705362 - 29705549
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||  || | || |||||||| ||||||||||||| |||||||| ||||||         | |||| ||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 29705461  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcat 241  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||    
T  29705462 ctatttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcat 29705549  T

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Target: chr8; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 11582766 - 11582958
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| ||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||| ||  ||||||||| |||||||||||| ||| | |||| |||||||||||||||| |||| |||||||||||| ||||    
T  11582866 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactc 11582958  T

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Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 9231173 - 9231266
Alignment:
Q  265 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcctgtctgtctgggtaagtaacaattgtattatatat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| ||||||||||||||||||||||||||    
T  9231173 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtc----ctgtccgggtaagtaacaattgtattatatat 9231266  T

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Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 62 - 247
Target Start/End: Original strand, 2546995 - 2547189
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    ||||||||||||||||||||  |||||||  || |  | |||||||| | ||||||||||| ||||||| |||||||         | |||| |||||||    
T  2546995 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatct 2547094  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||| | |||| ||||||||||||||| ||||| ||||||||||||||||||    
T  2547095 tctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactca 2547189  T

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Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 2166063 - 2165875
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||| ||||||||||| | ||||||| || | || |||||| | ||||||||||||  |||||||||||||||         | |||| ||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatc 242  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| | |||| ||||||||| |||||||| || |||||||||||||    
T  2165963 ctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgtcacatgggatggtacatgtatcatc 2165875  T

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Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 62 - 245
Target Start/End: Complemental strand, 42197536 - 42197344
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| | ||||||| || | || |||| |||  | |||||||||| |||||||||||||||         | |||| |||||||    
T  42197536 aggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatct 42197437  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    |||||||||||||||| ||  ||||||||| ||| |||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||    
T  42197436 tctatttgtgtggggtccagattgccacgtgtcaaaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42197344  T

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Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 5754897 - 5755072
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattt 147  Q
    ||||||||||||||||||||||||| | ||||||| || |||| |||||||||||||| ||||||| |||||||||||||||         | |||| ||    
T  5754897 tttaaaggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactt 5754996  T
Q  148 tatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatg 223  Q
    |||||||||||| |||||| | ||||||||||||| | |||||||||||||| | |||| ||||||||||| ||||    
T  5754997 tatcttctatttatgtgggatccaagttgccacgtgttagaattttgtgtgggtgtaaagggtgtattgccccatg 5755072  T

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Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 30912660 - 30912470
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||| ||||||||| || | || ||||||||   |||||||||||  ||||||||||||||         | | ||  |||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaaccgcaccttatcttct 30912561  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||  | |||||||||| |||||||||||||||| | ||||  |||||||||||||||||||| |||||||||||||||||    
T  30912560 atttgtgtggggtctaggttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactc 30912470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 60 - 249
Target Start/End: Original strand, 42295192 - 42295389
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||| ||||||||||||||||| ||||||||| || | |  ||||||||  |||||||||||| |||||||||||||||         | |||| |||||    
T  42295192 aaagaaaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttat 42295291  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcata 249  Q
    ||||||||| |||||| | ||||||||||| | |||||||||||||||||| |||| ||| ||||||||||| || || ||||| ||||||||||||||    
T  42295292 cttctatttatgtggg-tccaagttgccacatgtcagaattttgtgtggatgtaaagggtatattgccacataggatggtacatttatcatcactcata 42295389  T

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Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 9241639 - 9241748
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| |||||||||||||| |||||||| || |||||||||| |||||||||||||||| |  ||| ||||| ||||||||||||||| |||||||||||    
T  9241639 cacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgcaaagggtgtgttgccacatggggtggtacatgtatca 9241738  T
Q  241 tcactcatat 250  Q
    ||||||||||    
T  9241739 tcactcatat 9241748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 29801048 - 29800864
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||| |||| | ||||||| || |||| |||||||| ||||||||||||| |||||||||||||||         | |||| ||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 29800949  T
Q  156 atttgtgtggggttcaag-ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| |||||||| |||| ||||||| | |||||||||| ||||| | |||| ||||||||||||||||||||| |||||||||||    
T  29800948 atttatgtggggt-caagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatca 29800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 45397317 - 45397507
Alignment:
Q  64 gaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttc 154  Q
    ||||||||||| |||||| ||||||||| || | || ||| |||| || |||||||||| ||||||| |||||||         | |||| |||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatcttc 45397416  T
Q  155 tatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||| | ||  ||||||||| |||||||||||||||| | |||| ||||| ||||||||| ||||| |||||||||||||||||    
T  45397417 tatttgtgtgggctccagattgccacgtgtcagaattttgtgtgggtgtaaagggtgtgttgccacat-gggtggtacatgtatcatcactc 45397507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 20148762 - 20148952
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||| |||| ||||||||| || |||| |||||||| | ||| ||||||| |||||||||||||||         | |||| |||||| |||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatct 20148861  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| |||||| | ||  ||||||||| |||||||||| ||||| | |||| ||||||||||||||||| ||| ||||||||||| |||||    
T  20148862 atttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactc 20148952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 3743858 - 3743964
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| |||||||||||||| ||| |||||||  ||||||||| |||||||||| ||||| | |||| |||||||||| |||||||||| ||||| |||||    
T  3743858 cacactttatcttctatttatgtagggttcagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgctacatggggtggtacatatatca 3743957  T
Q  241 tcactca 247  Q
    |||||||    
T  3743958 tcactca 3743964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 65 - 245
Target Start/End: Original strand, 26125637 - 26125825
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||| |||| ||||||||| || || | |||||||| || |||||||||| |||||||||||||||         | |||| ||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 26125736  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    |||| |||||| | ||  ||||||||| |||||||||| || || | |||| ||||||||||||||||||||| ||||| ||||| ||||    
T  26125737 atttatgtggg-tccagattgccacgtgtcagaattttatgcgggtgtaaagggtgtattgccacatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 1375542 - 1375734
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt-atc--------acattttatctt 153  Q
    ||||||| ||||||||||| | ||||||| || | || |||||||| ||||| ||||||| |||||||||||| || |||        ||| ||||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatctt 1375641  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||| |||||  ||||||||| | ||||| |||||||| | ||||   ||||||| ||||| ||||| ||||||||||| |||||    
T  1375642 ctatttgtgtggagttcagattgccacgtgttagaatcttgtgtgggtgtaaagaatgtattgtcacatagggtggtacatgtatcaccactc 1375734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 40528647 - 40528529
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatg-gggtgatacatgtatc 239  Q
    |||| ||| ||||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||| | ||||| |||||| |||||  |||||||||    
T  40528647 cacactttctcttctatttgtgtggggttcaagttgtcacatgtcataattttgtgtggatgtaaatgatatattgtcacatgagggtg-cacatgtatc 40528549  T
Q  240 atcactcatatttaaatata 259  Q
    | ||||||||| || |||||    
T  40528548 accactcatatatatatata 40528529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 18066819 - 18066746
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||| |||||| || || || |||||||||||||||||||||||| ||||||| ||||    
T  18066819 aggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaa 18066746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 34304786 - 34304860
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||||||||||| || || | ||||||||||| |||||| |||||| | ||||||||||    
T  34304786 aaggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 34304860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 35181512 - 35181588
Alignment:
Q  59 taaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||||| |||||| || || | ||||||||||| |||||| |||||| | ||||||||||    
T  35181512 taaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 35181588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 42699259 - 42699332
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt 138  Q
    ||||||||||||||||| ||||||||| || | || |||||||| |  |||||||| | ||||||| |||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagtt 42699332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 34304908 - 34304979
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||| ||||||| ||| | |||  ||||||||||||||||||||| ||||||||||| |||||    
T  34304908 ttgccacatgtcaggattttgtttgggtgtaagaggtgtattgccacatggggtg-tacatgtatcaccactc 34304979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 63 - 245
Target Start/End: Original strand, 30014343 - 30014534
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || |||| ||| |||||||||||||||||| |||||||||||||||         | || | ||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    |||||| | |||||| |||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  30014443 ctatttatatggggtccaagttaccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtgatacatgtatcatcact 30014534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 21279928 - 21280121
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| ||||||||  || || | |||| ||||||||||||||||| |||||||||||| ||         | |||| |||||||    
T  21279928 aggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatct 21280027  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| | |||| ||| ||||||||||||||||| |||||||||||||||||    
T  21280028 tctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtatattgccacatggggtggtacatgtatcatcactc 21280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 7273439 - 7273243
Alignment:
Q  59 taaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacatttta 149  Q
    ||||||||||||||||||||||| ||||||||| || | | ||||||||| ||||||||||||  |||||||||||||||         |||||| ||||    
T  7273439 taaaggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacacttta 7273340  T
Q  150 tcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||  ||||||| |||||||||||| |||||| ||||||||||    
T  7273339 tcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattaccacatggggtggtacatgcatcatcactc 7273243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 247
Target Start/End: Complemental strand, 24204085 - 24203894
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||| | ||||||| || | |||||||||||  |||||||||||| |||||||||||||||         | |||| ||||| ||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatattct 24203986  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||| ||||||||||||||||||    
T  24203985 atttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgtcacatggagtggtacatgtatcatcactca 24203894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 7367543 - 7367738
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattt 147  Q
    ||||||||||||||||| ||||||||| ||||||| || | |  |||||||||||||||||||||| |||||||||||||||         | |||| ||    
T  7367543 tttaaaggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacactt 7367642  T
Q  148 tatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatca 243  Q
    ||| |||||||| |||||| | || |||||||||| |||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||    
T  7367643 tattttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatca 7367738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 246
Target Start/End: Complemental strand, 9698434 - 9698241
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| |||||||    
T  9698434 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 9698335  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||| ||  ||||||||| |||||||||||| ||| | |||| |||||||||||||||| |||| |||||||||||| ||||    
T  9698334 tctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactc 9698241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 65 - 247
Target Start/End: Original strand, 30735984 - 30736175
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||||||||   ||||||| || | || |||||||| | ||||||||||  |||||||||||||||         |||||| ||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatcttct 30736083  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    |||| |||||||| || |||||||||| |||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||    
T  30736084 atttatgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgggatggtacatgtatcatcactca 30736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 55 - 255
Target Start/End: Original strand, 3213392 - 3213601
Alignment:
Q  55 tatttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacat 145  Q
    |||||||||||||||||||||| |||| ||||||||| || |||  |||||||| ||||||||||| | |||||||||||| ||         | || |     
T  3213392 tatttaaaggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatac 3213491  T
Q  146 tttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    |||||||||||||| |||||||| ||  ||||||||| |||||||||| ||||| | |||| ||||||||||||||||||||| ||||||||||| ||||    
T  3213492 tttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccact 3213591  T
Q  246 catatttaaa 255  Q
    | ||||||||    
T  3213592 cttatttaaa 3213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 63 - 245
Target Start/End: Complemental strand, 13743321 - 13743130
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| | ||||||| || |||| |||||||| ||||||||||||| |||||||||||||||         | |||| ||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13743222  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    ||||||||||||||| || |||||||||| ||||||| |||||||| | |||| | | ||||||||||| ||||| ||||||||||| ||||    
T  13743221 ctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 63 - 245
Target Start/End: Complemental strand, 13748821 - 13748630
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| | ||||||| || |||| |||||||| ||||||||||||| |||||||||||||||         | |||| ||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13748722  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    ||||||||||||||| || |||||||||| ||||||| |||||||| | |||| | | ||||||||||| ||||| ||||||||||| ||||    
T  13748721 ctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 26466796 - 26466991
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    ||||||||||||||||| |||| ||||||||| || | || ||||||||  ||||||||||||  ||||||||||||||         | |||| |||||    
T  26466796 aaaggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttat 26466895  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||| ||| | |||| ||||||||||||||| ||||| || ||||||||||||||    
T  26466896 cttctatttgtttggggttcaggttgccacgtatcaggattttgtatgggtgtaaaaggtgtattgccacatagggtggtaaatgtatcatcactc 26466991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 26670112 - 26669923
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||||||||| ||||||||| || | |  |||||||| | ||||||||||| |||||||||||||||         | |||| |||||    
T  26670112 aaaggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttat 26670013  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    ||||||||||||||| || || |||||||||| |||||||||||||||| | |||| |||||||||||||||| |||| ||||| |||||    
T  26670012 cttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatca 26669923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 7999612 - 7999705
Alignment:
Q  265 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcctgtctgtctgggtaagtaacaattgtattatatat 362  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    ||||| ||||||||||||||||||||||||||    
T  7999612 acgtagtatcgtcaataggtctaaaaaagtatctaaaaatattaaatttagatatttatgtc----ctgtccgggtaagtaacaattgtattatatat 7999705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 7292744 - 7292933
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||| ||||| | ||||||| || | |  ||| |||| || |||||||||| |||||||||||||||         | |||| |||||    
T  7292744 aaaggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 7292843  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||||||||||||||||| || |||||||||| |||||||||||| ||  | |||| ||||||||||||||||||||| |||||||||||    
T  7292844 cttctatttgtgtggggtccaggttgccacgtgtcagaattttgtttgtgtgtaaagggtgtattgccacatggggtggtacatgtatca 7292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 62 - 246
Target Start/End: Complemental strand, 21293778 - 21293585
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    ||||||||||||||| |||| ||||||||| || ||   | |||||| ||||||||||| | |||||||||||| ||         | |||| |||||||    
T  21293778 aggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatct 21293679  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| |||||||| ||  ||||||||| |||||||||| ||||| | |||| |||||||||||||||| |||| ||||||||||| |||||    
T  21293678 tctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatgaggtggtacatgtatcaccactc 21293585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 27441544 - 27441614
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||| |||||| || || | |||||||||||||| |||||||| | ||||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaa 27441614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 31109328 - 31109254
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttg 131  Q
    |||| |||||||||||||||||||| |||||| || || |||| ||| |||| |||||| | |||| ||||||||    
T  31109328 tttataggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttg 31109254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 33242401 - 33242475
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||| | |||| || || | | ||||||||| ||||||||||| | | ||||||||||    
T  33242401 aaggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaa 33242475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 33254049 - 33254106
Alignment:
Q  189 attttgtgtggatataaatggtgtattgccacatgg-ggtgatacatgtatcatcactc 246  Q
    ||||||||||| |||||| ||||||||||||||||| |||| ||||||||||| |||||    
T  33254049 attttgtgtgggtataaaaggtgtattgccacatggaggtg-tacatgtatcaccactc 33254106  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 33242523 - 33242595
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||| ||||||||||| | |||  |||||||||||||||||||   ||||||||||| |||||    
T  33242523 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 33242595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 8e-46; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 30838631 - 30838824
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| ||||||||  || ||| ||||||||| ||||||||||||| |||||||||||||||         | |||| |||||||    
T  30838631 aggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 30838730  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||| || |||||||||| |||||||||||||| | | |||| ||||||||||||||||||||| |||||||||||||||||    
T  30838731 tctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtaggtgtaaaaggtgtattgccacatggggtggtacatgtatcatcactc 30838824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 43335865 - 43335668
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt-atc--------acattttatc 151  Q
    ||||||||||||| ||||||||| ||||||| || | |  |||||||||||||||||||||| ||||||||||||||| |||        ||| ||||||    
T  43335865 aaggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatc 43335766  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcata 249  Q
    |||||||| |||||| | || |||||||||| |||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  43335765 ttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtatattgccacatggggtggtacatgtatcatcactcata 43335668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 4764829 - 4764634
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    ||||||||||||||||| |||| | ||||||| || | ||||||||||| |||||||||||   |||||||||||| ||         | |||| |||||    
T  4764829 aaaggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttat 4764730  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  4764729 cttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactc 4764634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 19047158 - 19047349
Alignment:
Q  64 gaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttc 154  Q
    |||||||||||||||||| ||||||||| || || | |||||||| || |||||||||| |||||||||||||||         | |||| |||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 19047257  T
Q  155 tatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||| ||  ||||||||| ||| |||||||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  19047258 tatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 19047349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 12302357 - 12302165
Alignment:
Q  59 taaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacatttta 149  Q
    ||||||||||||||||||||||| ||||||||  || | || |||||||| || |||||||||| ||||||| |||||||         | |||| ||||    
T  12302357 taaaggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacacttta 12302258  T
Q  150 tcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatc 242  Q
    |||||||||| |||||||| || ||| ||| || |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  12302257 tcttctatttatgtggggtccaggttaccatgtgtcagaattttgtgtggatgtaaaggatgtattgccacatggggtgatacatgtatcatc 12302165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 248
Target Start/End: Original strand, 16096747 - 16096942
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagttat---------cacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || | || ||| |||| ||||||||||||| |||||||||| |||||          |||| ||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T
Q  154 ctatttgtgtggggttc-aagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
    ||| || ||||||| || |||||||||||| |||||||||||||||| | |||| ||||||||||||||||  ||| |||||||||||||||||||    
T  16096847 ctacttatgtgggggtctaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgatgtggtacatgtatcatcactcat 16096942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 43490499 - 43490309
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||| ||||||||| || |||| ||||||||  | |||||||||| |||||||||||||||         | |||| ||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatcttct 43490400  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| |||||||| ||  ||||||||| |||||||||||| ||| | |||| |||||||||||||||| |||| |||||||| ||||||||    
T  43490399 atttatgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtagcatcactc 43490309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 42849861 - 42849768
Alignment:
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||    
T  42849861 ttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 1750414 - 1750606
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || | || |||||||| || |||||||||| ||||||| |||||||         | |||| ||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||| ||  ||||||||| |||||||||||||||  | |||| ||||| ||||||||||||||| ||||  |||||||||||    
T  1750514 ctatttgtgtggggtccagattgccacgtgtcagaattttgtgtgagtgtaaagggtgtgttgccacatggggtggtacaaatatcatcactc 1750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 30242201 - 30242150
Alignment:
Q  265 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttaga 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30242201 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttaga 30242150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 43114551 - 43114629
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||||||| |||||| || || | ||||||||||| |||||| |||||| | ||||||||||    
T  43114551 tttaaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 43114629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 16803966 - 16804036
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttg 131  Q
    ||||||||||||||||||||| |||||| || || | |||||||||||||||||| |||||| | ||||||    
T  16803966 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttg 16804036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 16843248 - 16843318
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttg 131  Q
    ||||||||||||||||||||| |||||| || || | |||||||||||||||||| |||||| | ||||||    
T  16843248 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttg 16843318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 39149354 - 39149202
Alignment:
Q  101 attgtacatcccatgtattaggtatattttggtaagtt-atc--------acattttatcttctatttgtgtggggttcaagttgccacgtatcagaatt 191  Q
    ||||||||||| |||||||||  ||||||||||||||| |||        ||| |||||||| ||||||||||||  | || || |||||| ||| ||||    
T  39149354 attgtacatcctatgtattagagatattttggtaagttcatcccacaactacactttatcttttatttgtgtgggtctaaa-ttaccacgtctcataatt 39149256  T
Q  192 ttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||| | |||| |||||||| |||||| ||||| |||||||||||||||||    
T  39149255 ttgtgtgggtgtaaaaggtgtattaccacat-gggtggtacatgtatcatcactc 39149202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 11825752 - 11825682
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||| |||||| || || | ||||||||||| |||||| |||||| | ||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 11825682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 12415430 - 12415367
Alignment:
Q  184 tcagaattttgtgtggatataaatggtgtattgccacatggg-gtgatacatgtatcatcactca 247  Q
    |||||||||||||||||| |||  |||||||||||||||||| ||| ||||||||||| ||||||    
T  12415430 tcagaattttgtgtggatgtaagaggtgtattgccacatgggagtg-tacatgtatcaccactca 12415367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 12415560 - 12415488
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| |||||| || || | | ||||||||| |||||| |||||| | ||||||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaa 12415488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 12427490 - 12427427
Alignment:
Q  184 tcagaattttgtgtggatataaatggtgtattgccacatggg-gtgatacatgtatcatcactca 247  Q
    |||||||||||||||||| |||  |||||||||||||||||| ||| ||||||||||| ||||||    
T  12427490 tcagaattttgtgtggatgtaagaggtgtattgccacatgggagtg-tacatgtatcaccactca 12427427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 12427620 - 12427548
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| |||||| || || | | ||||||||| |||||| |||||| | ||||||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaa 12427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 966936 - 966877
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtatta 120  Q
    ||||||||||||||||||||| |||||| || || | ||||||||||| |||||| ||||    
T  966936 aaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 18491699 - 18491777
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||| |||||||||||||||||||| |||||| || || | ||||||||||| | |||| |||| | | ||||||||||    
T  18491699 tttataggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaa 18491777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 33229303 - 33229377
Alignment:
Q  65 aaaatgttacatgaacatccttt-attcttatatcctattgtacatcccatgtattaggtatattttggtaagtt 138  Q
    |||||| |||||||||| ||||| |||| || | |  |||||||| ||||||||||||| |||||||||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagtt 33229377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 41282072 - 41282006
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttg 131  Q
    ||||||||||||||||| |||||| || || | ||||||||||| |||||| |||||| | ||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttg 41282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 42026867 - 42026956
Alignment:
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatgg-ggtgatacatgtatcat 241  Q
    |||||||||||||||||  | ||||| |  | |||||||||||||||| | |||  ||||||||||||||||| |||| ||||||||||||    
T  42026867 ttctatttgtgtggggtctaggttgcaagatgtcagaattttgtgtgggtgtaaggggtgtattgccacatggaggtg-tacatgtatcat 42026956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 43114677 - 43114758
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatg-gggtgatacatgtatcatcactcatatttaaa 255  Q
    ||||||| | |||| ||||||||||| | |||  |||||||||||||||| ||||| ||||||||||| ||||||| ||||||    
T  43114677 ttgccacttgtcaggattttgtgtgggtgtaagaggtgtattgccacatgagggtg-tacatgtatcaccactcatttttaaa 43114758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 34817789 - 34817684
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| ||| ||||||||||||  ||| | || |||||||| | |||||||||||| ||| | |||  || | ||||||||||||||   |||||||||||    
T  34817789 cacactttctcttctatttgtacgggatccaggttgccacatgtcagaattttgtatgggtgtaaggggagcattgccacatgggggtgtacatgtatca 34817690  T
Q  241 tcactc 246  Q
    ||||||    
T  34817689 tcactc 34817684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 966814 - 966738
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatat 250  Q
    ||||||| | |||| ||||||||||| | |||  |||||||| ||||||||||   ||||||||||| |||||||||    
T  966814 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtatttccacatggggatgtacatgtatcaccactcatat 966738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 8896598 - 8896542
Alignment:
Q  139 atcacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgt 195  Q
    |||||| ||| | ||||||||||||| |||||| |||||||| | ||||||||||||    
T  8896598 atcacactttcttttctatttgtgtgaggttcaggttgccacatgtcagaattttgt 8896542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 11825634 - 11825562
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||| ||||||||||| | |||  |||||||||||||||||||   ||||||||||| |||||    
T  11825634 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggggatgtacatgtatcaccactc 11825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 34895721 - 34895649
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||| ||||||||||| | |||  |||||||||||||||||||   ||||||||||| |||||    
T  34895721 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 34895649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 43343722 - 43343530
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||||| ||||||  || | ||||||||||| ||||||||||||| |||||||| ||||||         | |||| ||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 43343623  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcat 248  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||| |||| |||||||||||||||| |||| |||||||||||||||||||    
T  43343622 atttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactcat 43343530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 44417032 - 44416842
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||||| ||||||  || | ||||||||||| ||||||||||||| |||||||| ||||||         | |||| ||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttct 44416933  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  44416932 atttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactc 44416842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 62 - 242
Target Start/End: Original strand, 9216301 - 9216489
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||||  |||||||||||||||         | ||||||||||||    
T  9216301 aggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcacaaccacattttatct 9216399  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatc 242  Q
    ||||||||||||||||| |||||||| | | |||||||||||||||||| |||| ||||||||| ||||||||||| || || |||||||    
T  9216400 tctatttgtgtggggtttaagttgccgcatgtcagaattttgtgtggatgtaaaaggtgtattgtcacatggggtggtatatatatcatc 9216489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 42972852 - 42973044
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    |||||||||||| |||||||||||||||| || |  | |||||||| | ||||||||||| |||||||||||||||         | |||||||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42972951  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| | |||||||||||||||||||| || |  |||||||||||| ||||    
T  42972952 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacataggatagtacatgtatcattactc 42973044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 63 - 247
Target Start/End: Complemental strand, 42538531 - 42538338
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| ||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42538432  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    ||||||||||||||| ||  ||||||||| |||||||||||| ||| | |||| |||||||||||||||| |||| |||||||||||| |||||    
T  42538431 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactca 42538338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 246
Target Start/End: Complemental strand, 24001112 - 24000920
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| ||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||| ||  ||||||||| |||||||||||| ||| | |||| |||||||||||||||| |||| |||||||||||| ||||    
T  24001012 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactc 24000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 5015392 - 5015581
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    ||||||||||||||||||||||  |||||||  || |  | |||||||| | ||||||||||| |||||||||||||||         | |||| |||||    
T  5015392 aaaggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttat 5015491  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||  | |||| ||||||||||||||||||||| |||||||||||    
T  5015492 cttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgagtgtaaaaggtgtattgccacatggggtggtacatgtatca 5015581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 16180370 - 16180265
Alignment:
Q  141 cacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  16180370 cacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatca 16180271  T
Q  241 tcactc 246  Q
    ||||||    
T  16180270 tcactc 16180265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 101 - 250
Target Start/End: Complemental strand, 32029879 - 32029721
Alignment:
Q  101 attgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttctatttgtgtggggttcaagttgccacgtatcagaatt 191  Q
    |||||||| ||||||||||||| |||||||||||| ||         | |||| |||||||||||||| |||||||| ||||||||||||| ||||||||    
T  32029879 attgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatcttctatttatgtggggtccaagttgccacgtgtcagaatt 32029780  T
Q  192 ttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatat 250  Q
    |||||||| | |||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  32029779 ttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatgactcatat 32029721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 63 - 246
Target Start/End: Complemental strand, 5811024 - 5810832
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    |||||||||||||||| || ||||||||| || | || |||||||| || || ||||||| |||||||| ||||||         | |||| ||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatctt 5810925  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||| ||||||||||| | ||| |||||||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  5810924 ctatttgtgtggggtccaagttgccacatgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 5810832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 252
Target Start/End: Complemental strand, 26898499 - 26898304
Alignment:
Q  66 aaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttcta 156  Q
    |||||||||||||||| | ||||||| || | || ||||||||| |||||||||||| |||||||||||||||         | |||| ||||| |||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacactttatattcta 26898400  T
Q  157 tttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatattt 252  Q
    |||||||||||| || ||| |||||| |||||||||| ||||| | |||| ||||||||||||||| || || ||||||||||| |||||||||||    
T  26898399 tttgtgtggggtccaggttaccacgtgtcagaattttatgtgggtgtaaaaggtgtattgccacataggatggtacatgtatcaccactcatattt 26898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 35069720 - 35069913
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    ||||||||||||||||||||  |||||||| || | |  |||||||| | ||||||||||| |||||||||||||||         | |||| |||||||    
T  35069720 aggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatct 35069819  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| |||| ||| ||||||||||||| |||||||||||||| ||| |||| | | ||||||||||| || || |||||||||||||||||    
T  35069820 tctatttatgtgaggtccaagttgccacgtgtcagaattttgtgtagatgtaaaggatatattgccacataggatggtacatgtatcatcactc 35069913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 246
Target Start/End: Original strand, 41861672 - 41861868
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtatta--ggtatattttggtaagtt---------atcacatttta 149  Q
    ||||||||||||||||||||| ||||||||| || | || ||| |||| || ||||||||  |  |||||||||||||||         | |||| ||||    
T  41861672 aaggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacacttta 41861771  T
Q  150 tcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||| |||||| || |||||||||| |||||||||||| ||| | |||| ||||||||||||||||| ||| ||||||||||| |||||    
T  41861772 tcttctatttgtatggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 10573751 - 10573941
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||| |||| ||||||||| || ||||||||||||| ||||||||||||| |||||||||||| ||         | |||| ||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatcttct 10573850  T
Q  156 atttgtgtggggttcaag-ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| ||||||| ||||| ||||||| |||||||||||| ||||| | |||| | | ||||| |||||| |||| ||||||||||| |||||    
T  10573851 atttatgtgggg-tcaagattgccacatatcagaattttatgtgggtgtaaaggatatattgtcacatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 44326180 - 44326370
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    |||||||||||| |||| ||||||||| || |||| |||||||| | ||| ||||||| |||||||||||||||         | |||| |||||| |||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatct 44326279  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| |||||| | ||  ||||||||| |||||||||| ||||| | |||| ||||||||||||||||| ||| ||||||||||| |||||    
T  44326280 atttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactc 44326370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 63 - 251
Target Start/End: Original strand, 45326020 - 45326217
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||| |||||||| |||| | ||||||| || |||  |||||||| ||||| ||||||| |||||||||||||||         |||||| ||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatctt 45326119  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatatt 251  Q
    |||||| |||||||| ||   | |||| | |||||||||| ||||| | |||||||||||||| ||||||||||| ||||||||||| ||||| ||||    
T  45326120 ctatttatgtggggtccagactaccacctgtcagaattttatgtgggtgtaaatggtgtattgtcacatggggtggtacatgtatcaccactcttatt 45326217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 38160587 - 38160505
Alignment:
Q  146 tttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtg 228  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||||||||| | |||  |||||||||||||||||||||    
T  38160587 tttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaggggtgtattgccacatggggtg 38160505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 243
Target Start/End: Complemental strand, 27393340 - 27393171
Alignment:
Q  83 cctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttctatttgtgtggggttcaag 173  Q
    ||||||||| || |||||||||||||  | |||||||||| ||||||| |||||||         | |||| |||||||||||||| |||||||| || |    
T  27393340 cctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccagg 27393241  T
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatca 243  Q
    ||||| | | |||||||||| ||||| | |||| | ||||||||||||||||||| ||||||||||||||    
T  27393240 ttgcctcatgtcagaattttatgtgggtgtaaaggatgtattgccacatggggtggtacatgtatcatca 27393171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 24280702 - 24280554
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattt 147  Q
    |||| ||||||||||||| |||||| ||||||||| || | |||||| ||||||||||| | |||  |||||||||||| ||         |||||| ||    
T  24280702 tttataggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactt 24280603  T
Q  148 tatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtg 196  Q
    | ||||||||||||||||||| ||||||||||  |||||||||||||||    
T  24280602 tctcttctatttgtgtggggtccaagttgccatatatcagaattttgtg 24280554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 46479341 - 46479389
Alignment:
Q  14 tttgtgatgtgtatgagtttgtgattgtgaagtgaaggcgatatttaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46479341 tttgtgatgtgtatgagtttgtgattgtgaagtgaaggcgatatttaaa 46479389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 4638297 - 4638107
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttct 155  Q
    ||||||||||||||||| | ||||||| || |  | |||||||| ||||| ||||| | |||||||||||||||         | || | ||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatcttct 4638198  T
Q  156 atttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||  | ||| |||||| ||||||| |||| ||||| |||| ||||||||| ||| | ||||| ||||||||||| |||||    
T  4638197 atttgtgtggggtctaggttaccacgtgtcagaatcttgtatggatgtaaagggtgtattgtcacgtagggtggtacatgtatcaccactc 4638107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 40236915 - 40236991
Alignment:
Q  59 taaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||||| |||||| || || ||||||||||||| |||||| |||||| | ||||||||||    
T  40236915 taaaggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaa 40236991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 31408732 - 31408661
Alignment:
Q  64 gaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||| |||||| || || |  ||||||||||||||||| |||| | ||||||||||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaa 31408661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatatttt 130  Q
    |||||||||||||||||||   |||| || || ||||||||||||| ||||||||||||| |||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 249
Target Start/End: Original strand, 43317442 - 43317638
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| | ||||||| || | |  ||||||||||| |||  ||||| |||||||| ||| ||         |||||| ||  |||    
T  43317442 aggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttactct 43317541  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccaca-tggggtgatacatgtatcatcactcata 249  Q
    ||||||||||||||||  |  ||||||| | |||||||||||||||| | |||  ||||||||||||||   ||||| ||||||||||| ||||||||    
T  43317542 tctatttgtgtggggtctagattgccacatgtcagaattttgtgtgggtgtaaggggtgtattgccacacaagggtg-tacatgtatcaccactcata 43317638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 47279701 - 47279632
Alignment:
Q  177 ccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||| |||||||||||| ||||| |||||| ||||||||| || ||||| || ||||||||||| |||||    
T  47279701 ccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtacatgtatcaccactc 47279632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 27535211 - 27535139
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||||||||||||||||| |||  | ||||||||||||||| |  |||||||||||| |||||    
T  27535211 ttgccacatgtcagaattttgtgtggatgtaagagatgtattgccacatggaggaatacatgtatcaccactc 27535139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 31513287 - 31513359
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    |||||||||||||||||||  ||||| || || | ||||||||| | |||||| |||| | ||||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaa 31513359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 40237039 - 40237111
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||| | |||| ||||||||||| | |||  |||||||||||||||||||   ||||||||||| |||||    
T  40237039 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 40237111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 62 - 247
Target Start/End: Complemental strand, 14289 - 14096
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| ||||||||  || | || ||||||||||| |||||||||| ||||||| |||||||         | |||| |||||||    
T  14289 aggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatct 14190  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    |||||||||||||| | || |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  14189 tctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactca 14096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 62 - 247
Target Start/End: Complemental strand, 24617 - 24424
Alignment:
Q  62 aggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatct 152  Q
    |||||||||||||||||||| ||||||||  || | || ||||||||||| |||||||||| ||||||| |||||||         | |||| |||||||    
T  24617 aggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatct 24518  T
Q  153 tctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    |||||||||||||| | || |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  24517 tctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactca 24424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 65 - 252
Target Start/End: Complemental strand, 25915085 - 25914898
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt-atcacattttatcttctatttgtgt 163  Q
    ||||||||||||||||| ||||||||| || | |  |||||||| || |||||||||  ||||||| ||| ||| ||| |||  ||||||||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattaga-atatttttgtaggttcatctcataatatcttctatttgtgt 25914987  T
Q  164 ggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcatattt 252  Q
    ||||| || |||||||||| |||||||||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  25914986 ggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactcttattt 25914898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 246
Target Start/End: Complemental strand, 2614749 - 2614557
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || |||| |||||||| || |||||||||| |||||||||||||||         | |||| ||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||| ||  ||||||||| |||||||||||| ||| | |||| |||||||||||||||| |||| |||||||||||| ||||    
T  2614649 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactc 2614557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 55 - 251
Target Start/End: Original strand, 7617125 - 7617330
Alignment:
Q  55 tatttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacat 145  Q
    |||| |||||||||||||||||||||| ||||||||| || |  | ||| |||| ||||||||||||| |||||||||||||||         | ||||     
T  7617125 tattaaaaggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacac 7617224  T
Q  146 tttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcact 245  Q
    |||||||||||||| |||||| |  |||||| ||| | |||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||||    
T  7617225 tttatcttctatttatgtgggatctaagttgtcacatgtcagaattttgtgttggtgtaaaaggtgtattgccacatggggtgatacatgtatcatcact 7617324  T
Q  246 catatt 251  Q
    | ||||    
T  7617325 cttatt 7617330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 249
Target Start/End: Original strand, 18033980 - 18034177
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||||||||||||| ||||||||| || |  | |||||||| || |||||||||| ||||||| |||||||         | |||| ||||||    
T  18033980 aaggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatc 18034079  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactcata 249  Q
    ||||||||||||||||| || |||||||||| |||||||||| | ||| | |||| |||||||||||| |||||||| ||||||||||||||||||||    
T  18034080 ttctatttgtgtggggtccaggttgccacgtgtcagaattttatatgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactcata 18034177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 22512299 - 22512472
Alignment:
Q  57 tttaaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattt 147  Q
    ||||| ||||||||||||||||||| ||||||||| || |  | ||||||||  |||||||||||| |||||||||||||||         | |||| ||    
T  22512299 tttaatggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactt 22512398  T
Q  148 tatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccaca 221  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  22512399 tatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccaca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 63 - 247
Target Start/End: Complemental strand, 41334763 - 41334570
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||||||||||| ||||||||| || | |  ||| |||| || |||||||||| |||||||||||||||         | |||| ||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    ||||||||||||||| || |||||||||| |||||||||||| ||| | |||| ||||||||||||||||||||| ||||||||||| ||||||    
T  41334663 ctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactca 41334570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 246
Target Start/End: Original strand, 33801467 - 33801661
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||||||||||||||||||||||  || | || ||||||||  |||||||||||| ||||||| |||||||         | |||| ||||||    
T  33801467 aaggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatc 33801566  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||| | ||||  |||||||||||||||||  | ||||| |||||||||||    
T  33801567 ttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacatgggaaggtacatatatcatcactc 33801661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 40808229 - 40808136
Alignment:
Q  265 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcctgtctgtctgggtaagtaacaattgtattatatat 362  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    | |||||||||||||||||||||||    
T  40808229 acgtagtatcgccaataggtctaaaagagtatctaaaaatattaaatttagatattcatgtcctgtccg----gataagtaacaattgtattatatat 40808136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 246
Target Start/End: Original strand, 5256991 - 5257187
Alignment:
Q  59 taaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacatttta 149  Q
    ||||| |||||||||||| |||| | ||||||| || |||| |||||||| ||||||||||||| |||||||||||| ||         | |||| ||||    
T  5256991 taaagaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacacttta 5257090  T
Q  150 tcttctatttgtgtggggttcaag-ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||| ||||||| ||||| ||||||| | |||||||||| ||||| | |||| ||||||||||||||||||||| ||||||||||| |||||    
T  5257091 tcttctatttatgtgggg-tcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 5257187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 2914841 - 2914748
Alignment:
Q  265 acgtagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatattcatgtcctgtctgtctgggtaagtaacaattgtattatatat 362  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||     |||| ||||||||||||||||||||||||||    
T  2914841 acgtagtattgccaataggtctaaaaaagtatctaacaatattaaatttagatattcatgtc----ttgtccgggtaagtaacaattgtattatatat 2914748  T

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Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 240
Target Start/End: Original strand, 38470577 - 38470765
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    |||||||||||||||| |||| ||||||||| || || | |||||||| ||||||||||| | |||||||||||| ||         |||||| ||||||    
T  38470577 aaggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatc 38470676  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    |||||||| |||||||| ||  || ||||||||||||||||| ||||| | |||| |||||||||||| ||| |||| |||||||||||    
T  38470677 ttctatttatgtggggtccagattaccacgtatcagaattttatgtgggtgtaaagggtgtattgccatatgaggtggtacatgtatca 38470765  T

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Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 39122370 - 39122264
Alignment:
Q  140 tcacattttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatc 239  Q
    ||||| |||||||||||||||||||||||| | |||||||| | ||||||| |||||||||| |||||| | ||||| ||||||||||| ||||||||||    
T  39122370 tcacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcacatggggtggtacatgtatc 39122271  T
Q  240 atcactc 246  Q
    | |||||    
T  39122270 accactc 39122264  T

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Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 33855143 - 33855066
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagttat 140  Q
    ||||||||||||||||||| ||||||||| || | || |||||||| ||||||||||||| | |||||||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagttat 33855066  T

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Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 39122441 - 39122366
Alignment:
Q  146 tttatcttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccaca 221  Q
    |||||||||||||||||||||||| | |||||||| | ||||||| |||||||||| |||||| | ||||| ||||    
T  39122441 tttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcaca 39122366  T

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Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 30622821 - 30622747
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||||||||||||| || || | ||||||||| | |||||| |||| | ||||||||||||    
T  30622821 aaaggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaa 30622747  T

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Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 32473494 - 32473422
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||||| |||||| || || | | ||||||||| | |||| |||||| ||||||||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaa 32473422  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 30622699 - 30622626
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    ||||||| | ||| |||||||||||| | |||  |||||||||||||||||||   ||||||||||| ||||||    
T  30622699 ttgccacatgtcaaaattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactca 30622626  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 32473374 - 32473298
Alignment:
Q  174 ttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatgg-ggtgatacatgtatcatcactcatat 250  Q
    ||||||| | |||||||||||||||| | |||  ||||||||||||||||| |||| ||||||||||| |||| ||||    
T  32473374 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatggaggtg-tacatgtatcaccacttatat 32473298  T

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Target: scaffold0038 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 112656 - 112847
Alignment:
Q  64 gaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatcttc 154  Q
    |||||||||||||||||| ||||||||| || || | |||||||| || |||||||||| |||||||||||||||         | |||| |||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 112755  T
Q  155 tatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactc 246  Q
    |||||||||||||| ||  ||||||||| ||| |||||||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  112756 tatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 112847  T

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Target: scaffold0157 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 63 - 247
Target Start/End: Complemental strand, 23521 - 23328
Alignment:
Q  63 ggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatctt 153  Q
    ||||||||||| ||||||| ||||||||| || |  | |||||||||||||||||||||  |||||||||||||||         |||||| ||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 23422  T
Q  154 ctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||| | ||||  |||||||| ||||||||||| | |||||||||| |||||    
T  23421 ctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtcacatggggtggtgcatgtatcattactca 23328  T

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Target: scaffold0119 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 682 - 871
Alignment:
Q  60 aaaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttat 150  Q
    |||||||||||||||||||||| ||||||||| || | |  |||||||| | ||||||||||| |||||||||||||||         | |||| |||||    
T  682 aaaggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttat 781  T
Q  151 cttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatca 240  Q
    ||||||||||||||| || || |||||||||| |||||||||||||||| | |||| |||||||||||||||| |||| ||||| |||||    
T  782 cttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatca 871  T

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Target: scaffold0385 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 11249 - 11444
Alignment:
Q  61 aaggaaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaagtt---------atcacattttatc 151  Q
    ||||||||||| |||||||||  |||||||| || | || |||||||| ||||| ||||||| |||||||||||||||         | |||| ||||||    
T  11249 aaggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatc 11348  T
Q  152 ttctatttgtgtggggttcaagttgccacgtatcagaattttgtgtggatataaatggtgtattgccacatggggtgatacatgtatcatcactca 247  Q
    |||||||  |||||||| |||||||| |||| |||||||||||||| | | ||||| ||||||||||||||||| || ||||||||||||||||||    
T  11349 ttctattgatgtggggtccaagttgctacgtgtcagaattttgtgtaggtgtaaatagtgtattgccacatgggatggtacatgtatcatcactca 11444  T

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Target: scaffold0689 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0689
Description:

Target: scaffold0689; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 1809 - 1757
Alignment:
Q  268 tagtatcgccaataggtctaaaaaagtatctaaaaatattaaatttagatatt 320  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  1809 tagtatcggcaataggtctgaaaaagtatctaaaaatatcaaatttagatatt 1757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 45817 - 45747
Alignment:
Q  65 aaaatgttacatgaacatcctttattcttatatcctattgtacatcccatgtattaggtatattttggtaa 135  Q
    ||||||||||||||||| |||||| || || | |||||||||||||| |||||||| | ||||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaa 45747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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