View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6937_low_12 (Length: 228)

Name: NF6937_low_12
Description: NF6937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6937_low_12
NF6937_low_12
[»] chr3 (30 HSPs)
chr3 (1-107)||(10868262-10868368)
chr3 (1-105)||(21739900-21740004)
chr3 (130-228)||(10868427-10868525)
chr3 (128-218)||(14863725-14863815)
chr3 (128-228)||(21739747-21739847)
chr3 (3-105)||(14863842-14863944)
chr3 (128-218)||(15481027-15481117)
chr3 (129-215)||(42674710-42674796)
chr3 (128-209)||(24925963-24926044)
chr3 (128-213)||(46907944-46908029)
chr3 (128-196)||(17077588-17077656)
chr3 (128-215)||(36709690-36709777)
chr3 (1-92)||(45684835-45684926)
chr3 (128-198)||(962452-962522)
chr3 (128-198)||(16179721-16179791)
chr3 (128-198)||(34332104-34332174)
chr3 (128-198)||(48569312-48569382)
chr3 (136-213)||(25388146-25388223)
chr3 (8-93)||(42674828-42674913)
chr3 (1-93)||(15481147-15481239)
chr3 (134-210)||(23819352-23819428)
chr3 (1-93)||(36709569-36709661)
chr3 (134-209)||(6175755-6175830)
chr3 (1-52)||(46908100-46908151)
chr3 (128-198)||(2365059-2365129)
chr3 (128-198)||(19919518-19919588)
chr3 (152-210)||(31675736-31675794)
chr3 (128-194)||(36731674-36731740)
chr3 (128-210)||(43120951-43121033)
chr3 (152-196)||(53942051-53942095)
[»] chr2 (13 HSPs)
chr2 (1-228)||(11233748-11233971)
chr2 (1-228)||(9668265-9668487)
chr2 (128-215)||(8065533-8065620)
chr2 (128-215)||(35488619-35488706)
chr2 (134-210)||(13551369-13551445)
chr2 (128-215)||(28399822-28399909)
chr2 (1-93)||(28399939-28400031)
chr2 (152-210)||(20004750-20004808)
chr2 (137-209)||(15018467-15018539)
chr2 (128-198)||(12646331-12646401)
chr2 (128-198)||(33515482-33515552)
chr2 (128-197)||(22724729-22724798)
chr2 (128-209)||(25380672-25380753)
[»] chr1 (18 HSPs)
chr1 (4-228)||(49264224-49264442)
chr1 (128-228)||(20796441-20796541)
chr1 (1-105)||(39430936-39431040)
chr1 (128-228)||(39431067-39431167)
chr1 (1-91)||(20796316-20796406)
chr1 (152-213)||(17708863-17708924)
chr1 (134-210)||(5497873-5497949)
chr1 (143-210)||(26721429-26721496)
chr1 (152-209)||(7395998-7396055)
chr1 (134-209)||(32352590-32352665)
chr1 (134-209)||(48072704-48072779)
chr1 (128-198)||(6051384-6051454)
chr1 (128-198)||(35541815-35541885)
chr1 (152-201)||(3544387-3544436)
chr1 (153-198)||(5809387-5809432)
chr1 (152-213)||(10710478-10710538)
chr1 (139-196)||(19014274-19014331)
chr1 (139-196)||(28358683-28358740)
[»] chr8 (22 HSPs)
chr8 (128-218)||(24794501-24794591)
chr8 (1-228)||(43249063-43249285)
chr8 (128-218)||(11393600-11393690)
chr8 (3-105)||(11393725-11393827)
chr8 (1-87)||(24794405-24794491)
chr8 (128-215)||(23942868-23942955)
chr8 (128-218)||(43611460-43611550)
chr8 (128-218)||(43612454-43612544)
chr8 (128-209)||(36157935-36158016)
chr8 (138-212)||(6901728-6901802)
chr8 (152-210)||(17659646-17659704)
chr8 (134-204)||(29721194-29721264)
chr8 (152-197)||(25193893-25193938)
chr8 (152-207)||(4991976-4992031)
chr8 (128-198)||(7925167-7925237)
chr8 (128-198)||(13878776-13878846)
chr8 (128-198)||(32267335-32267405)
chr8 (128-198)||(42176846-42176916)
chr8 (152-209)||(7453157-7453214)
chr8 (131-196)||(12135007-12135072)
chr8 (139-196)||(28992510-28992567)
chr8 (1-93)||(23942746-23942838)
[»] chr4 (25 HSPs)
chr4 (128-218)||(42952800-42952890)
chr4 (1-87)||(42952900-42952986)
chr4 (128-209)||(29553079-29553160)
chr4 (1-93)||(26694587-26694679)
chr4 (128-215)||(26694709-26694796)
chr4 (152-198)||(9691228-9691274)
chr4 (152-213)||(10562598-10562659)
chr4 (128-209)||(19115217-19115298)
chr4 (137-210)||(34976731-34976804)
chr4 (137-197)||(20396372-20396432)
chr4 (134-209)||(20675822-20675897)
chr4 (134-209)||(23872755-23872830)
chr4 (134-209)||(55299408-55299483)
chr4 (128-198)||(1827829-1827899)
chr4 (128-198)||(19733277-19733347)
chr4 (128-198)||(19756048-19756118)
chr4 (128-198)||(19783688-19783758)
chr4 (128-198)||(23641880-23641950)
chr4 (128-198)||(23647538-23647608)
chr4 (152-198)||(43516037-43516083)
chr4 (128-198)||(48312875-48312945)
chr4 (128-198)||(54482449-54482519)
chr4 (152-197)||(8935879-8935924)
chr4 (152-197)||(42779055-42779100)
chr4 (160-209)||(55464159-55464208)
[»] chr5 (28 HSPs)
chr5 (128-218)||(19506779-19506869)
chr5 (128-215)||(35121960-35122047)
chr5 (128-209)||(22094527-22094608)
chr5 (128-209)||(30509301-30509382)
chr5 (128-209)||(30549644-30549725)
chr5 (128-215)||(38358248-38358335)
chr5 (1-93)||(38358126-38358218)
chr5 (3-105)||(35122083-35122185)
chr5 (152-213)||(29572144-29572205)
chr5 (152-213)||(29573521-29573582)
chr5 (152-213)||(29574898-29574959)
chr5 (152-213)||(29576275-29576336)
chr5 (152-213)||(29577652-29577713)
chr5 (152-213)||(29579029-29579090)
chr5 (137-213)||(6050030-6050106)
chr5 (176-210)||(19838394-19838428)
chr5 (128-198)||(23239164-23239234)
chr5 (152-210)||(26261595-26261653)
chr5 (128-198)||(27796265-27796335)
chr5 (128-198)||(28534965-28535035)
chr5 (128-198)||(30731603-30731673)
chr5 (128-198)||(33170439-33170509)
chr5 (128-198)||(35983080-35983150)
chr5 (128-198)||(42514501-42514571)
chr5 (152-193)||(6885718-6885759)
chr5 (143-200)||(20208007-20208064)
chr5 (8-105)||(30509424-30509521)
chr5 (8-105)||(30549764-30549861)
[»] chr6 (17 HSPs)
chr6 (128-228)||(13086324-13086424)
chr6 (1-80)||(13086198-13086277)
chr6 (134-210)||(26206120-26206196)
chr6 (128-215)||(21549628-21549715)
chr6 (152-202)||(11060147-11060197)
chr6 (152-213)||(649347-649408)
chr6 (128-198)||(18681863-18681933)
chr6 (128-198)||(24766703-24766773)
chr6 (137-209)||(15674622-15674694)
chr6 (131-190)||(11469357-11469416)
chr6 (152-215)||(17078339-17078402)
chr6 (152-210)||(502809-502867)
chr6 (152-210)||(1104224-1104282)
chr6 (128-194)||(13938499-13938565)
chr6 (128-198)||(17605623-17605693)
chr6 (152-198)||(25351028-25351074)
chr6 (152-201)||(14843423-14843472)
[»] chr7 (23 HSPs)
chr7 (1-104)||(13553562-13553665)
chr7 (128-205)||(19735299-19735376)
chr7 (1-93)||(18768067-18768159)
chr7 (3-102)||(19735179-19735279)
chr7 (128-215)||(18671952-18672039)
chr7 (137-198)||(23054259-23054320)
chr7 (128-198)||(29968755-29968825)
chr7 (128-218)||(36227420-36227510)
chr7 (152-213)||(34232506-34232567)
chr7 (128-200)||(18768189-18768261)
chr7 (1-93)||(34457547-34457639)
chr7 (1-53)||(36364175-36364227)
chr7 (128-196)||(39930887-39930955)
chr7 (134-209)||(13440845-13440920)
chr7 (1-52)||(29968633-29968684)
chr7 (171-218)||(43572365-43572412)
chr7 (128-198)||(4937417-4937487)
chr7 (128-198)||(11276537-11276607)
chr7 (128-198)||(17721416-17721486)
chr7 (152-209)||(45993381-45993438)
chr7 (152-200)||(4078082-4078130)
chr7 (65-105)||(5327486-5327526)
chr7 (65-105)||(41340255-41340295)
[»] scaffold0007 (1 HSPs)
scaffold0007 (137-213)||(182905-182981)
[»] scaffold0112 (1 HSPs)
scaffold0112 (132-198)||(14950-15016)
[»] scaffold0308 (1 HSPs)
scaffold0308 (3-104)||(17806-17907)
[»] scaffold0179 (2 HSPs)
scaffold0179 (153-210)||(8338-8395)
scaffold0179 (153-200)||(13272-13319)
[»] scaffold0472 (1 HSPs)
scaffold0472 (128-198)||(4033-4103)
[»] scaffold0034 (1 HSPs)
scaffold0034 (128-198)||(105132-105202)
[»] scaffold0131 (1 HSPs)
scaffold0131 (157-209)||(3826-3878)


Alignment Details
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10868262 - 10868368
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  10868262 aagcaaaattaaactccctcaatctccttacccctaaccctccagactcctttgaagaactccaagtattccaacctatccaagtaattttccgacggtc 10868361  T
Q  101 ctcacaa 107  Q
    |||||||    
T  10868362 ctcacaa 10868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21740004 - 21739900
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtc 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||| | ||||||    
T  21740004 aagcaaaattaaactccctcaatctccttacccccaaccctccagactcctttgaagaacacaaagtattccaacctatccaagtaattttccgacggtc 21739905  T
Q  101 ctcac 105  Q
    |||||    
T  21739904 ctcac 21739900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 10868427 - 10868525
Alignment:
Q  130 attcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgcttccataaggac 228  Q
    ||||||||| |||| |||||  |||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  10868427 attcaacaaggattcaatggaagagattatacctgatagagctttaaagaaggaaagagcatatacaggcaaagatgtcagaactgctttcataaggac 10868525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 14863815 - 14863725
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||||||||||| |||||  |||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14863815 ttattcaacaaagattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 14863725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 21739847 - 21739747
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgcttccataagga 227  Q
    |||||||||||||||| |||||  ||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  21739847 ttattcaacaaagattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcggaactgctttcaaaagga 21739748  T
Q  228 c 228  Q
    |    
T  21739747 c 21739747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 14863944 - 14863842
Alignment:
Q  3 gcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcct 102  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||   ||||||||||||||||| |||||||||| | ||||||||    
T  14863944 gcaaaattaaactccctcaatctcctaacccccaaccctccagactccttagaagaacataaagtattccaacctatccaagtaattttccgacggtcct 14863845  T
Q  103 cac 105  Q
    |||    
T  14863844 cac 14863842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 15481117 - 15481027
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||| ||||||| |||||  ||||||||||||||| || |||| ||||| ||||||||||||||| ||| ||| |||||||| ||||    
T  15481117 ttattcaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagagcatagacaagcagagatgtcagaacagctt 15481027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 42674796 - 42674710
Alignment:
Q  129 tattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    ||||||| ||||||| |||||  ||||||| ||||| | || |||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  42674796 tattcaataaagattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactg 42674710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 24926044 - 24925963
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||| || ||||||| |||||  ||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||||||||    
T  24926044 ttatttaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggcagagaagtca 24925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 46908029 - 46907944
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||| || ||||||| |||||  |||||||||| |||| || |||| ||||||||||||||||||| ||||| ||| ||||||||    
T  46908029 ttatttaataaagattcaatggaagagattatacttgatggagctttgaagaaggaaagagcatagataggcagagaggtcagaac 46907944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 17077656 - 17077588
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagaca 196  Q
    |||||||||||||||| |||||  |||||||||||||| ||| |||| || |||||||| |||||||||    
T  17077656 ttattcaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagaca 17077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 36709690 - 36709777
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  ||||||||||||| | || |||| ||||| |||||||||| |||||||| ||| || |||||||    
T  36709690 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatcgacaggcagagatgttagaactg 36709777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 45684835 - 45684926
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaattttt 92  Q
    |||||| |||||||||| |||||| ||| ||||| || |||||||||||||||   |||| | ||| || |||||||||| |||||||||||    
T  45684835 aagcaatattaaactccttcaatcgcctaacccccaaacctccaaactccttttttgaacacaaagaatcccaacctatccaagtaattttt 45684926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 962522 - 962452
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || ||||||||||||||||||||    
T  962522 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 962452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 16179721 - 16179791
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||| ||| |||| || |||||||| |||||||||||    
T  16179721 ttatttaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacagg 16179791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 34332174 - 34332104
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || ||||||| |||||||| |||||||||||    
T  34332174 ttattaaacaaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagtgcatagacagg 34332104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 48569382 - 48569312
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||| || |||| || |||||||| |||||||||||    
T  48569382 ttatttaacaaagattcaatggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacagg 48569312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 25388223 - 25388146
Alignment:
Q  136 caaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||||||||||||  |||||||||||| | ||| |||| ||||| ||||||||||||||| | | ||| ||||||||    
T  25388223 caaagatttaatggaagagattatacctaaaagagctttgaagaaagaaagagcatagacaaggagagaggtcagaac 25388146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 42674913 - 42674828
Alignment:
Q  8 attaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||||||| |||||||||| ||| | || ||||||  |||||||  ||||| | |||||| |||||||||| ||||||||||||    
T  42674913 attaaactccttcaatctcctcacctccaaacctccatgctcctttttagaacacaaagtatcccaacctatccaagtaatttttc 42674828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15481239 - 15481147
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| ||||  |||| ||||| || ||||||  |||||||  ||||| | | ||||||||||||||| ||||||||||||    
T  15481239 aagcaatattaaactccttcaacttcctaacccccaaacctccatgctcctttttagaacacaaggtattccaacctatccaagtaatttttc 15481147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 23819352 - 23819428
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||||| |||||  |||||||||| |||| || |||| ||||||||||| ||||| ||||||| ||| |||||    
T  23819352 aacaaagattcaatggaagagattatacttgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcag 23819428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36709569 - 36709661
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| ||||  |||| ||||| || ||||||  |||||||  ||||| | | ||||||||||||||| ||||||||||||    
T  36709569 aagcaatattaaactccttcaacttcctaacccccaaacctccatgctcctttttagaacacaaggtattccaacctatccaagtaatttttc 36709661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 6175830 - 6175755
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||||| ||| | |||||||||||||| | ||  ||| ||||||||||| ||||||||||||| ||| ||||    
T  6175830 aacaaagattcaatagaggagattatacctgttggagttttgaagaaggaaagtgcatagacaggcagagatgtca 6175755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46908151 - 46908100
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctt 52  Q
    |||||||||||||||||| ||| | ||| ||||| |||||||||||||||||    
T  46908151 aagcaaaattaaactcccacaaacgcctcacccccaaccctccaaactcctt 46908100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 2365059 - 2365129
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  2365059 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 2365129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 19919588 - 19919518
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  19919588 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 19919518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 31675736 - 31675794
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    ||||||||||||||  || |||| ||||||||||| |||||||||||||| || |||||    
T  31675736 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcag 31675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 36731674 - 36731740
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcataga 194  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || ||||||||||||||||    
T  36731674 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcataga 36731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 43121033 - 43120951
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    ||||| |||||||||| |||||  |||||||||||| || || |||| ||||||||||  |||||||||| || ||| |||||    
T  43121033 ttattaaacaaagattcaatggaagagattatacctaatggagctttgaagaaggaaaacgcatagacagacagagaggtcag 43120951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 53942051 - 53942095
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagaca 196  Q
    ||||||||||||||  || |||| |||||||||||||||||||||    
T  53942051 gagattatacctgacggagctttgaagaaggaaagagcatagaca 53942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 11233971 - 11233748
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtc 100  Q
    ||||||||||||||||||||||  |||| ||||| ||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||| | ||||||    
T  11233971 aagcaaaattaaactccctcaacttcctaacccccaaccctccagactcctttgaagaacacaaagtattccaacctatccaagtaattttccgacggtc 11233872  T
Q  101 ctcacaannnnnnnnnnnnnnnnnnnnttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggca 200  Q
    |||||                      |||||||||||||||| |||||  |||| |||||||||| || |||||||||||||||||||||| |||||||    
T  11233871 ctcac----tcccccccccaaaaaaaattattcaacaaagattcaatggaagagactatacctgatggagctttaaagaaggaaagagcataaacaggca 11233776  T
Q  201 aagaagtcagaactgcttccataaggac 228  Q
    |||||||||||||||||| || ||||||    
T  11233775 aagaagtcagaactgctttcaaaaggac 11233748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 9668487 - 9668265
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtc 100  Q
    ||||||| |||||||||||||| ||||| ||||| |||||| || ||||||||| ||||| | ||||||||||||||||| |||||||||| | ||||||    
T  9668487 aagcaaagttaaactccctcaacctcctaacccccaacccttcagactcctttggagaacacaaagtattccaacctatccaagtaattttccgacggtc 9668388  T
Q  101 ctcacaannnnnnnnnnnnnnnnnnnnttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggca 200  Q
    |||||                      |||||||||||||||| |||||  ||||||||| ||||| || ||||||||||||| ||||||||||||| ||    
T  9668387 ctcac-----tccccccccaaaaaaaattattcaacaaagattcaatggaagagattatatctgatggagctttaaagaaggacagagcatagacagaca 9668293  T
Q  201 aagaagtcagaactgcttccataaggac 228  Q
    | |||||||||||||||| || ||||||    
T  9668292 acgaagtcagaactgctttcaaaaggac 9668265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 8065620 - 8065533
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  ||||||||||||||| || |||| |||||||||| ||||||||||| |||||||||||||||||    
T  8065620 ttattcaataaagattcaatggaagagattatacctgatggagctttgaagaaggaaaaagcatagacagacaaagaagtcagaactg 8065533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 35488619 - 35488706
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  ||||||||||||||  || ||||||||||||||| |||||||||||||||||| ||||||||||    
T  35488619 ttattcaataaagattcaatggaagagattatacctgaaggagctttaaagaaggaaaaagcatagacaggcaaagaggtcagaactg 35488706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 13551369 - 13551445
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||||| ||| | |||||||||||||||| || |||| ||||||||||| ||||||||||||||||| |||||    
T  13551369 aacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcag 13551445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 28399909 - 28399822
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  ||||||||||||| | || |||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  28399909 ttattcaataaagattcaatggaagagattatacctgctggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactg 28399822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28400031 - 28399939
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| |||||| ||| ||||| || |||||||||||||||   |||| | ||| || |||||||||| ||||||||||||    
T  28400031 aagcaatattaaactccttcaatcgcctaacccccaaacctccaaactccttttttgaacacaaagaatcccaacctatccaagtaatttttc 28399939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 20004750 - 20004808
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||||||||||||| |||| |||||||| |||| ||||||||| || ||||||||    
T  20004750 gagattatacctgatagagctttgaagaaggagagagtatagacaggtaacgaagtcag 20004808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 15018467 - 15018539
Alignment:
Q  137 aaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||||| |||||  ||||||||||||||  || |||| ||||||||||| ||||||||||||  ||||||||    
T  15018467 aaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacaggccgagaagtca 15018539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 12646331 - 12646401
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| || ||||||||||||||||||||    
T  12646331 ttatttaacaaagattcaatggaagagattatacctggcggagctttgaaaaaggaaagagcatagacagg 12646401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 33515552 - 33515482
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| ||||||||||||||||  |||||| |||||||  || |||| || |||||||| |||||||||||    
T  33515552 ttatttaacaaagatttaatggaagagattgtacctgacggagctttgaaaaaggaaagtgcatagacagg 33515482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 22724798 - 22724729
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacag 197  Q
    ||||| ||||| |||| |||||  |||||||||||| |   | |||||||||||||||||||||||||||    
T  22724798 ttattaaacaatgattcaatggtagagattatacctaacgaagctttaaagaaggaaagagcatagacag 22724729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 25380753 - 25380672
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||| ||||||| ||| |  ||||||||||||||| || |||| ||||| ||||| ||||||| ||||| | ||||||    
T  25380753 ttattcaataaagattcaatagaagagattatacctgatggagctttgaagaaagaaagtgcatagagaggcagataagtca 25380672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 228
Target Start/End: Complemental strand, 49264442 - 49264224
Alignment:
Q  4 caaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcctc 103  Q
    |||| |||||||||||||| ||||| ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||| |||||||||| | |||||||||    
T  49264442 caaagttaaactccctcaacctcctaacccccaaccctccagactcctttggagaacacaaagtattccaacctatccaagtaattttccgacggtcctc 49264343  T
Q  104 acaannnnnnnnnnnnnnnnnnnnttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaag 203  Q
    ||                      |||||||||||||||| |||||  ||||||||||||||| || |||||||||| |||||||||||||||||||| |    
T  49264342 ac------tcccccccaaaaaaagttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaagaaagagcatagacaggcaacg 49264249  T
Q  204 aagtcagaactgcttccataaggac 228  Q
    ||||||||||||||| || ||||||    
T  49264248 aagtcagaactgctttcaaaaggac 49264224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 20796441 - 20796541
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgcttccataagga 227  Q
    |||||||||||||||| |||||  ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  20796441 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggaaaagaagtcagaactgctttcaaaagga 20796540  T
Q  228 c 228  Q
    |    
T  20796541 c 20796541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 39430936 - 39431040
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtc 100  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||| ||||||||| ||||| | ||||||||||| ||||| |||||||||| | ||||||    
T  39430936 aagcacaattaaactccctcaacctcctaacccctaaccctccagactcctttggagaacacaaagtattccaatctatccaagtaattttccgacggtc 39431035  T
Q  101 ctcac 105  Q
    |||||    
T  39431036 ctcac 39431040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 39431067 - 39431167
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgcttccataagga 227  Q
    |||||||||||||||| |||||  ||||||||||||||| || ||||||| ||||||||||||||||||||||| ||| |||| ||||||| || |||||    
T  39431067 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagacaggcaacgaattcaggactgctttcaaaagga 39431166  T
Q  228 c 228  Q
    |    
T  39431167 c 39431167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20796316 - 20796406
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttt 91  Q
    |||||||||||||||||||||| ||||| ||||| || |||||| ||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  20796316 aagcaaaattaaactccctcaacctcctaacccccaatcctccagactcctttggagaacacaaagtattccaacctatccaagtaatttt 20796406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 17708863 - 17708924
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||||||||||||| || |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  17708863 gagattatacctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 17708924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 5497873 - 5497949
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||| ||| ||| | |||||||||||||||| || |||| ||||||||||  ||||||||||||||||| |||||    
T  5497873 aacaaatattcaatagaggagattatacctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcag 5497949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 26721429 - 26721496
Alignment:
Q  143 ttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||  ||||||||||||||| || |||| ||||||||||| ||||||||||||| ||| |||||    
T  26721429 ttaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcag 26721496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 7396055 - 7395998
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||||||||||||| || |||| |||||||||||| ||||||||| |||||| ||||    
T  7396055 gagattatacctgatggagctttgaagaaggaaagatcatagacagacaaagaggtca 7395998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 32352665 - 32352590
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||| | ||| | |||||||||||||| | || |||| ||||||||||| ||||||||||||| ||| ||||    
T  32352665 aacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtca 32352590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 48072779 - 48072704
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||| | ||| | |||||||||||||| | || |||| ||||||||||| ||||||||||||| ||| ||||    
T  48072779 aacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtca 48072704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 6051384 - 6051454
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  6051384 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 6051454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 35541815 - 35541885
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  35541815 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 35541885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 3544436 - 3544387
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaa 201  Q
    ||||||||||||||  || |||| ||||||||||| ||||||||||||||    
T  3544436 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 3544387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 5809387 - 5809432
Alignment:
Q  153 agattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    |||||||||||||  || |||| |||||||||||||||||||||||    
T  5809387 agattatacctgacggagctttgaagaaggaaagagcatagacagg 5809432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 10710538 - 10710478
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||||||||||||| || |||| ||||||| ||| |||||||||| |||||| ||||||||    
T  10710538 gagattatacctgatggagctttgaagaagg-aagcgcatagacagacaaagaggtcagaac 10710478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 19014331 - 19014274
Alignment:
Q  139 agatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagaca 196  Q
    ||||| |||||  ||||||||| |||| ||| |||| |||||||||||||||||||||    
T  19014331 agattcaatggaagagattatatctgacagagctttgaagaaggaaagagcatagaca 19014274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 28358683 - 28358740
Alignment:
Q  139 agatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagaca 196  Q
    ||||| |||| | ||||||||||||||  || |||| |||||||||||||||||||||    
T  28358683 agattcaatgagagagattatacctgacggagctttgaagaaggaaagagcatagaca 28358740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 24794501 - 24794591
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||||||||||| |||||  ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24794501 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 24794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 43249285 - 43249063
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaattttt-caacggt 99  Q
    |||||||||||||||| ||||| ||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||    
T  43249285 aagcaaaattaaactctctcaacctcctaacccc-aaccctccagactcctttgaagaactcaaagtattccaacctatccaagtaatttttccgacggt 43249187  T
Q  100 cctcacaannnnnnnnnnnnnnnnnnnnttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggc 199  Q
    ||||||                      |||||||||||||||| ||||   ||||||||||||||| |||||||||||||| ||||||||| || ||||    
T  43249186 cctcac-----tccccccctaaaaaaaattattcaacaaagattcaatgaaagagattatacctgatggaactttaaagaagaaaagagcatggataggc 43249092  T
Q  200 aaagaagtcagaactgcttccataaggac 228  Q
    |||||| |||||||||||| || ||||||    
T  43249091 aaagaattcagaactgctttcaaaaggac 43249063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 11393690 - 11393600
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||||||||||| |||||  ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  11393690 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagacaggcaaagaagtcagaactgctt 11393600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 11393827 - 11393725
Alignment:
Q  3 gcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcct 102  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||   ||||||| ||||||||| |||||||||| | ||||||||    
T  11393827 gcaaaattaaactccctcaatcacctaacccccaaccctccagactcctttgaagaacataaagtatttcaacctatccaagtaattttccgacggtcct 11393728  T
Q  103 cac 105  Q
    |||    
T  11393727 cac 11393725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24794405 - 24794491
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaa 87  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||| | ||||||||||||||||| ||||||    
T  24794405 aagcaaaattaaactccctcaatctcctaacccccaaccctccagactccttcgaagaacacaaagtattccaacctatccaagtaa 24794491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 23942868 - 23942955
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  |||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||    
T  23942868 ttattcaataaagattcaatggaagagattatacatgatggagctttgaagaaggaaagagcatagacaggcaaagaagtcagaactg 23942955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 43611550 - 43611460
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||| |||||  |||  ||||||||||| | |||||||||||||||||    
T  43611550 ttattcaataaagatttaatggaagagattatacctgatagaactttgaagaataaaaaggcatagacaggaagagaagtcagaactgctt 43611460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 43612544 - 43612454
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||| ||||||| |||||  ||||||||||||||| || |||| ||||| ||||| ||||||||| | | |||||||||||||||||    
T  43612544 ttattcaataaagattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagacatgaagagaagtcagaactgctt 43612454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 36157935 - 36158016
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||| |||||||||| |||||  ||||||||||||||| || |||| ||||||||||| ||||||||||||| ||| ||||    
T  36157935 ttattaaacaaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtca 36158016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 6901728 - 6901802
Alignment:
Q  138 aagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaa 212  Q
    |||||| |||||  |||||||||||| || || |||| ||||||||||| ||||||||| ||| |||||||||||    
T  6901728 aagattcaatggaagagattatacctaatggagctttgaagaaggaaagggcatagacatgcagagaagtcagaa 6901802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 17659646 - 17659704
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||||| |||| || |||| ||||||||||| ||||||||||||||||| |||||    
T  17659646 gagattatacttgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcag 17659704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 29721264 - 29721194
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaaga 204  Q
    |||| ||||| |||||  ||||||||||||||  || |||| || ||||||||||||||||||||||||||    
T  29721264 aacatagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggcaaaga 29721194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 25193893 - 25193938
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacag 197  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||    
T  25193893 gagattatacctgacagagctttgaagaaggaaagagcatagacag 25193938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 4992031 - 4991976
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagt 207  Q
    ||||||||| |||| ||| |||| |||||||||||| |||||||| ||||||||||    
T  4992031 gagattatatctgacagagctttgaagaaggaaagatcatagacatgcaaagaagt 4991976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 7925167 - 7925237
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  7925167 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 7925237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 13878846 - 13878776
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  13878846 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 13878776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 32267335 - 32267405
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||| | | |||| || |||||||| |||||||||||    
T  32267335 ttattaaacaaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacagg 32267405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 42176916 - 42176846
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| ||||||||||||||||  | |||||||||||| | | |||| || |||||||| |||||||||||    
T  42176916 ttatttaacaaagatttaatggaagggattatacctgaaaaagctttgaaaaaggaaagtgcatagacagg 42176846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 7453157 - 7453214
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||||||||||||| || |||| ||||| ||||| ||||||||||| | ||||||||    
T  7453157 gagattatacctgatggagctttgaagaaagaaagtgcatagacaggtagagaagtca 7453214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 12135007 - 12135072
Alignment:
Q  131 ttcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagaca 196  Q
    ||||| ||||||| |||||  ||||||||||| |||  | |||||||||||||||| |||||||||    
T  12135007 ttcaataaagattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagaca 12135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 28992567 - 28992510
Alignment:
Q  139 agatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagaca 196  Q
    |||||| ||||  ||||||||||||||  | ||||| |||||||||||||||||||||    
T  28992567 agatttcatggaagagattatacctgacgggactttgaagaaggaaagagcatagaca 28992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23942746 - 23942838
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| ||||  |||| ||||| || ||||||  |||||||  ||||| | | ||||||||||||||| ||| ||||||||    
T  23942746 aagcaacattaaactccttcaacttcctgacccccaaacctccatgctcctttttagaacacaaggtattccaacctatccaagaaatttttc 23942838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 42952890 - 42952800
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||||||||||| |||||  ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42952890 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 42952800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42952986 - 42952900
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaa 87  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||| | ||||||||||||||||| ||||||    
T  42952986 aagcaaaattaaactccctcaatctcctaacccccaaccctccagactccttcgaagaacacaaagtattccaacctatccaagtaa 42952900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 29553160 - 29553079
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||| || ||||||| |||||  ||||||||||||||  || |||| ||||||||||||||||||||||||| ||||||||    
T  29553160 ttattaaataaagattcaatggaagagattatacctgacggagctttgaagaaggaaagagcatagacaggcagagaagtca 29553079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26694587 - 26694679
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| |||||||||| ||||| || |||||| ||| ||||  ||||| | |||||| |||||||||| ||||||||||||    
T  26694587 aagcaatattaaactccttcaatctcctcacccccaaacctccatacttctttttagaacacaaagtatcccaacctatccaagtaatttttc 26694679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 26694709 - 26694796
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  ||||||||||||| | || |||| ||||| ||||| ||||||||||||| ||| ||||||||||    
T  26694709 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagggcatagacaggcagagatgtcagaactg 26694796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 9691228 - 9691274
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||    
T  9691228 gagattatacctgacagaactttgaagaaggaaagagcataaacagg 9691274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 10562659 - 10562598
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||||||||||||| || |||| ||||||||||| |||||||||| || ||| ||||||||    
T  10562659 gagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaac 10562598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 19115217 - 19115298
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||| || ||||||| |||||  ||||||||||||||  || |||| ||||||||||| |||||||||| || ||||||||    
T  19115217 ttattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacagacagagaagtca 19115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 34976731 - 34976804
Alignment:
Q  137 aaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    ||||||| |||||  ||||||||||||||| || |||| ||||||||||| ||||| ||||||| ||| |||||    
T  34976731 aaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcag 34976804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 20396372 - 20396432
Alignment:
Q  137 aaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacag 197  Q
    ||||| |||||||  ||||||||||||||| || |||| ||||||||||| ||||||||||    
T  20396372 aaagaattaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 20675822 - 20675897
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||||| ||| | |||||||||||||| | || |||| ||||| ||||| ||||||||||||| ||| ||||    
T  20675822 aacaaagattcaatagaggagattatacctgctggagctttgaagaatgaaagtgcatagacaggcagagaggtca 20675897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 23872830 - 23872755
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||| | ||| | |||||||||||||| | || |||| ||||||||||| ||||||||||||| ||| ||||    
T  23872830 aacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtca 23872755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 55299408 - 55299483
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||| | ||| | |||||||||||||| | || |||| ||||||||||| ||||||||||||| ||| ||||    
T  55299408 aacaaagaatcaatagaggagattatacctgttggagctttgaagaaggaaagtgcatagacaggcagagaggtca 55299483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 1827899 - 1827829
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  1827899 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 1827829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 19733347 - 19733277
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| || ||||||| |||||  ||||||||||||||  || |||| || ||||||||||||||||||||    
T  19733347 ttatttaataaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 19733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 19756048 - 19756118
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||| |||  ||| || |||||||| |||||||||||    
T  19756048 ttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacagg 19756118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 19783758 - 19783688
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||| |||  ||| || |||||||| |||||||||||    
T  19783758 ttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacagg 19783688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 23641950 - 23641880
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  23641950 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 23641880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 23647608 - 23647538
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  23647608 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 23647538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 43516083 - 43516037
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||||||||||||| || | || |||||||||||||||||||||||    
T  43516083 gagattatacctgatggagccttgaagaaggaaagagcatagacagg 43516037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 48312875 - 48312945
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  48312875 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 48312945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 54482519 - 54482449
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  54482519 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 54482449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 8935879 - 8935924
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacag 197  Q
    ||||||||||||||  || |||| ||||||||||||||||||||||    
T  8935879 gagattatacctgacggagctttgaagaaggaaagagcatagacag 8935924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 42779055 - 42779100
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacag 197  Q
    ||||||||||||||| || |||| ||||||||||| ||||||||||    
T  42779055 gagattatacctgatggagctttgaagaaggaaagcgcatagacag 42779100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 55464208 - 55464159
Alignment:
Q  160 acctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||||| || |||| ||||||||||||||||||||| ||| ||||||||    
T  55464208 acctgattgagctttgaagaaggaaagagcatagacatgcagagaagtca 55464159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 19506779 - 19506869
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||||||||||| |||||  ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||    
T  19506779 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaagcaaagaagtcagaactgctt 19506869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 35122047 - 35121960
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||||||||||| |||||  ||||||||||||||  || |||||||||||||||||||||||||||||| |||||||| |||||    
T  35122047 ttattcaacaaagattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacaggcagagaagtcaaaactg 35121960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 22094608 - 22094527
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||| || ||||||| |||||  ||||||||||||||  || |||| ||||||||||||||||||||||||||||||||||    
T  22094608 ttattaaataaagattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacaggcaaagaagtca 22094527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 30509382 - 30509301
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||| |||||||| | |||||  ||||||||||||| | || |||||||||||||||||||||||||||||| ||||||||    
T  30509382 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtca 30509301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 30549725 - 30549644
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||| |||||||| | |||||  ||||||||||||| | || |||||||||||||||||||||||||||||| ||||||||    
T  30549725 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtca 30549644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 38358248 - 38358335
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  ||||||||||||| | || |||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  38358248 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactg 38358335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38358126 - 38358218
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| |||||||||| ||||| || |||||||||||||||  |||||   ||| || |||||||||| ||||||||||||    
T  38358126 aagcaatattaaactccttcaatctcctaacccccaaacctccaaactcctttttagaacataaagaatcccaacctatccaagtaatttttc 38358218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 35122185 - 35122083
Alignment:
Q  3 gcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcct 102  Q
    |||| |||||||| |||||| ||||| ||||| ||||||||| ||||||||  |||||    |||||||||| ||||| |||||||||  | ||||||||    
T  35122185 gcaacattaaacttcctcaacctcctaacccccaaccctccagactcctttttagaacatacagtattccaatctatccaagtaatttacctacggtcct 35122086  T
Q  103 cac 105  Q
    |||    
T  35122085 cac 35122083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 29572205 - 29572144
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    |||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  29572205 gagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 29572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 29573582 - 29573521
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    |||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  29573582 gagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 29573521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 29574959 - 29574898
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    |||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  29574959 gagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 29574898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 29576336 - 29576275
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    |||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  29576336 gagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 29576275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 29577713 - 29577652
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    |||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  29577713 gagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 29577652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 29579090 - 29579029
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    |||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  29579090 gagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 29579029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 6050030 - 6050106
Alignment:
Q  137 aaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||| |||||||  || |||||||||||| || |||| ||||||||||| |||||||||||||  || ||||||||    
T  6050030 aaagaattaatggaagatattatacctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaac 6050106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 19838394 - 19838428
Alignment:
Q  176 aagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||||||| ||||||||||||||||||||||    
T  19838394 aagaaggaaagaacatagacaggcaaagaagtcag 19838428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 23239164 - 23239234
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  23239164 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 23239234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 26261653 - 26261595
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    ||||||||||||||  || |||| ||||||||||||||||||||||  | |||||||||    
T  26261653 gagattatacctgaaggagctttgaagaaggaaagagcatagacagatagagaagtcag 26261595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 27796265 - 27796335
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  27796265 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 27796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 28535035 - 28534965
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  28535035 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 28534965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 30731673 - 30731603
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  30731673 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 30731603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 33170439 - 33170509
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||   |||||||||||||  || |||| || ||||||||||||||||||||    
T  33170439 ttatttaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagagcatagacagg 33170509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 35983150 - 35983080
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||   ||||||||||||| ||| |||| || |||||||| |||||||||||    
T  35983150 ttattaaacaaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagtgcatagacagg 35983080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 42514501 - 42514571
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  42514501 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 42514571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 6885718 - 6885759
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatag 193  Q
    ||||||||||||||| || |||| ||||||||||||||||||    
T  6885718 gagattatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 20208064 - 20208007
Alignment:
Q  143 ttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggca 200  Q
    |||||||  |||||||||| |||| || |||| ||||||||||| |||||||||||||    
T  20208064 ttaatggaagagattatacatgatggagctttgaagaaggaaagcgcatagacaggca 20208007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 30509521 - 30509424
Alignment:
Q  8 attaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcctcac 105  Q
    |||||| ||| ||||  |||| ||||| |||||||| |||||||||  |||||    |||||||||| ||||| |||||||||| | |||||||||||    
T  30509521 attaaattccttcaacttcctaacccccaaccctcctaactcctttttagaacaaacagtattccaatctatccaagtaattttcctacggtcctcac 30509424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 30549861 - 30549764
Alignment:
Q  8 attaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcctcac 105  Q
    |||||| ||| ||||  |||| ||||| |||||||| |||||||||  |||||    |||||||||| ||||| |||||||||| | |||||||||||    
T  30549861 attaaattccttcaacttcctaacccccaaccctcctaactcctttttagaacaaacagtattccaatctatccaagtaattttcctacggtcctcac 30549764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 13086324 - 13086424
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgcttccataagga 227  Q
    ||||| |||||||||| ||||   ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| || |||||    
T  13086324 ttatttaacaaagattcaatgaaagagattatacctgatggagctttaaagaaggaaagagcataaacaggcaaagaagtcagaactgctttcaaaagga 13086423  T
Q  228 c 228  Q
    |    
T  13086424 c 13086424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13086198 - 13086277
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatc 80  Q
    |||||| |||||||||| ||||  |||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  13086198 aagcaacattaaactccttcaacttcctaacccccaaccctccagcctcctttgaagaactccaagtattccaacctatc 13086277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 26206120 - 26206196
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||||| ||| | |||||||||||||||| || |||| ||||||||||| ||||||||||||||||| |||||    
T  26206120 aacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcag 26206196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 21549628 - 21549715
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    |||||||| ||||||| |||||  ||||||||||||| | || |||| ||||| ||||||||||||||| ||| ||| ||||||||||    
T  21549628 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaagcagagatgtcagaactg 21549715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 11060197 - 11060147
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaa 202  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  11060197 gagattatacctgatggaactttgaagaaggaaagcgcatagacaggcaaa 11060147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 649408 - 649347
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||||||||||||| || |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  649408 gagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaac 649347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 18681933 - 18681863
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||| ||||||||||| ||| || |||| || ||||||||||| ||||||||    
T  18681933 ttatttaacaaagattcaatgggagagattatacccgatggagctttgaaaaaggaaagagcgtagacagg 18681863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 24766773 - 24766703
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| ||||||||||||||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  24766773 ttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 24766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 15674622 - 15674694
Alignment:
Q  137 aaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||||| ||| | |||||||||||||| | || |||| ||||||||||| ||||||||||||| ||| ||||    
T  15674622 aaagattcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtca 15674694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 11469357 - 11469416
Alignment:
Q  131 ttcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagca 190  Q
    ||||||||||||| |||||  ||||||| ||||||| || |||| |||||||||||||||    
T  11469357 ttcaacaaagattcaatggaagagattaaacctgatggagctttgaagaaggaaagagca 11469416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 17078402 - 17078339
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    ||||||||||||||| || |||| ||||||||||| ||||| |||| || ||| ||||||||||    
T  17078402 gagattatacctgatggagctttgaagaaggaaagcgcataaacagacagagaggtcagaactg 17078339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 502867 - 502809
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    ||||||||||||||  || |||| ||||| ||||||||||||||||||| ||| |||||    
T  502867 gagattatacctgacggagctttgaagaaagaaagagcatagacaggcatagaggtcag 502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 1104282 - 1104224
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||| ||||| || || |||| |||||||||||||||||||||| || |||||||||    
T  1104282 gagattgtacctaatggagctttgaagaaggaaagagcatagacagacagagaagtcag 1104224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 13938499 - 13938565
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcataga 194  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || ||||||||||||||||    
T  13938499 ttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcataga 13938565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 17605693 - 17605623
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| ||| |  ||||||||||||||| || |||| || |||||||| |||||||||||    
T  17605693 ttatttaacaaagattcaatagaagagattatacctgatggagctttgaaaaaggaaagcgcatagacagg 17605623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 25351028 - 25351074
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||||||||||||  || |||| |||||||||||||||||||||||    
T  25351028 gagattatacctgacggagctttgaagaaggaaagagcatagacagg 25351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 14843472 - 14843423
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaa 201  Q
    ||||||||||||||  || |||| ||||||||||| ||||||||||||||    
T  14843472 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 14843423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13553665 - 13553562
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtc 100  Q
    |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||| ||||| | ||||||||||||||||| |||||||||| | ||||||    
T  13553665 aagcaaaattaaactccctcaacctcctaacccccaaccccccagactcctttggagaacacaaagtattccaacctatccaagtaattttccgacggtc 13553566  T
Q  101 ctca 104  Q
    ||||    
T  13553565 ctca 13553562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 19735299 - 19735376
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaa 205  Q
    |||||||||||||||| |||||  ||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  19735299 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaaagaa 19735376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18768067 - 18768159
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| |||||||||| ||||| || |||||||||||||||  ||||| | ||| || |||||||||| ||||||||||||    
T  18768067 aagcaatattaaactccttcaatctcctaacccccaaacctccaaactcctttttagaacacaaagaatcccaacctatccaagtaatttttc 18768159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 19735179 - 19735279
Alignment:
Q  3 gcaaaattaaactccctcaatctccttacccct-aaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcc 101  Q
    ||||||||||||| |||||||||| | | |||| ||||||||| ||||||| |||||||   |||||| |||||||||| |||||||||| | |||||||    
T  19735179 gcaaaattaaacttcctcaatctcgtaaaccctcaaccctccagactccttagaagaacataaagtatcccaacctatccaagtaattttccgacggtcc 19735278  T
Q  102 t 102  Q
    |    
T  19735279 t 19735279  T

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Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 18671952 - 18672039
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactg 215  Q
    ||||| || ||||||| |||||  |||||||||||||||| | |||| |||||||||||| ||||||||| || |||||| |||||||    
T  18671952 ttattaaataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagacagacagagaagttagaactg 18672039  T

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Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 23054320 - 23054259
Alignment:
Q  137 aaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||||| |||||  |||||||||||||| ||| |||||||||||||||| |||||||||||    
T  23054320 aaagattcaatggaagagattatacctgacagagctttaaagaaggaaagtgcatagacagg 23054259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 29968755 - 29968825
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || ||||||||||||||||||||    
T  29968755 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 29968825  T

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Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 36227510 - 36227420
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||  ||||||| |||||  || |||||||||||| || |||| ||||| ||||| ||||||||||| | |||||||| ||||||||    
T  36227510 ttattcattaaagattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaaaactgctt 36227420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 34232506 - 34232567
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||||||||||||| || |||| ||||||||||| ||||||||| ||| ||| ||||||||    
T  34232506 gagattatacctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaac 34232567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 18768189 - 18768261
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggca 200  Q
    |||||||| ||||||| |||||  |||||||||| || | || |||| ||||| |||||||||||||||||||    
T  18768189 ttattcaataaagattcaatggaagagattatacttgttggagctttgaagaaagaaagagcatagacaggca 18768261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34457639 - 34457547
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttc 93  Q
    |||||| |||||||||| |||||||||| ||||| || ||||||  |||| ||  ||||| | | |||| |||||||||| ||||||||||||    
T  34457639 aagcaatattaaactccttcaatctcctaacccccaaacctccatgctccgttttagaacacaatgtatcccaacctatccaagtaatttttc 34457547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36364175 - 36364227
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactccttt 53  Q
    |||||| ||||||||||||||||||||| ||||| ||||| ||| ||||||||    
T  36364175 aagcaatattaaactccctcaatctcctaacccccaacccaccatactccttt 36364227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 39930955 - 39930887
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagaca 196  Q
    |||||||| ||| |||| ||||  |||||||||| |||| || |||| |||||||||||||||||||||    
T  39930955 ttattcaataaatattttatggaagagattatacatgatggagctttgaagaaggaaagagcatagaca 39930887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 13440845 - 13440920
Alignment:
Q  134 aacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||| | ||| | |||||||||||||| | || |||| ||||||||||| ||||||||||||| ||| ||||    
T  13440845 aacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtca 13440920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29968633 - 29968684
Alignment:
Q  1 aagcaaaattaaactccctcaatctccttacccctaaccctccaaactcctt 52  Q
    |||||| ||||||||||||||||||| | ||||| ||||||||| |||||||    
T  29968633 aagcaatattaaactccctcaatctcgtaacccccaaccctccatactcctt 29968684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 43572365 - 43572412
Alignment:
Q  171 ctttaaagaaggaaagagcatagacaggcaaagaagtcagaactgctt 218  Q
    |||||||||||||||||||||| ||||||| |||||||| ||| ||||    
T  43572365 ctttaaagaaggaaagagcataaacaggcagagaagtcaaaacggctt 43572412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 4937487 - 4937417
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  4937487 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 4937417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 11276607 - 11276537
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  11276607 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 11276537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 17721416 - 17721486
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  17721416 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 17721486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 45993381 - 45993438
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    ||||||||||||||  || |||| ||||| ||||||||||||||||||| ||| ||||    
T  45993381 gagattatacctgacggagctttgaagaaagaaagagcatagacaggcagagaggtca 45993438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 4078082 - 4078130
Alignment:
Q  152 gagattatacctgatagaactttaaagaaggaaagagcatagacaggca 200  Q
    ||||||||||||||| || || | ||||||||||| |||||||||||||    
T  4078082 gagattatacctgatggagctctgaagaaggaaagcgcatagacaggca 4078130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 5327486 - 5327526
Alignment:
Q  65 agtattccaacctatctaagtaatttttcaacggtcctcac 105  Q
    |||||||||||||||| |||||||||||| | |||||||||    
T  5327486 agtattccaacctatccaagtaatttttctaaggtcctcac 5327526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 41340255 - 41340295
Alignment:
Q  65 agtattccaacctatctaagtaatttttcaacggtcctcac 105  Q
    |||||||||||||||| |||||||||||| | |||||||||    
T  41340255 agtattccaacctatccaagtaatttttctaaggtcctcac 41340295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 182905 - 182981
Alignment:
Q  137 aaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcagaac 213  Q
    ||||| |||||||  |||||||||||| || || |||| ||||||||||| ||||||||||||| ||| ||||||||    
T  182905 aaagaattaatggaagagattatacctaatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaac 182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 15016 - 14950
Alignment:
Q  132 tcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    |||| ||||||| |||||  ||||||||||||| | || |||| |||||||||||||||||||||||    
T  15016 tcaataaagattcaatggaagagattatacctggtggatctttgaagaaggaaagagcatagacagg 14950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 17806 - 17907
Alignment:
Q  3 gcaaaattaaactccctcaatctccttacccctaaccctccaaactcctttgaagaactccaagtattccaacctatctaagtaatttttcaacggtcct 102  Q
    |||| |||||||||| ||||  |||| ||||| ||||||||||||||||||  |||||    |||||||||| ||||  |||||||||| | ||||||||    
T  17806 gcaacattaaactccttcaacttcctgacccccaaccctccaaactcctttttagaacatacagtattccaatctattcaagtaattttcctacggtcct 17905  T
Q  103 ca 104  Q
    ||    
T  17906 ca 17907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 8338 - 8395
Alignment:
Q  153 agattatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtcag 210  Q
    |||||||||||||| || |||| ||||||||||| ||||||||||||| ||| |||||    
T  8338 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcag 8395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 13272 - 13319
Alignment:
Q  153 agattatacctgatagaactttaaagaaggaaagagcatagacaggca 200  Q
    |||||||||||||| || |||| ||||||||||| |||||||||||||    
T  13272 agattatacctgatggagctttgaagaaggaaagcgcatagacaggca 13319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 4033 - 4103
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  ||||||||||||||  || |||| || |||||||| |||||||||||    
T  4033 ttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 4103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 105202 - 105132
Alignment:
Q  128 ttattcaacaaagatttaatgggggagattatacctgatagaactttaaagaaggaaagagcatagacagg 198  Q
    ||||| |||||||||| |||||  |||||||||||||   || |||| ||||||||||| |||||||||||    
T  105202 ttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacagg 105132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 3878 - 3826
Alignment:
Q  157 tatacctgatagaactttaaagaaggaaagagcatagacaggcaaagaagtca 209  Q
    |||||||||| || |||| ||||| ||||| ||||||||||||| ||||||||    
T  3878 tatacctgatggagctttgaagaaagaaagggcatagacaggcagagaagtca 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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