View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6940_low_26 (Length: 298)
Name: NF6940_low_26
Description: NF6940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6940_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 13 - 282
Target Start/End: Original strand, 3556880 - 3557149
Alignment:
| Q |
13 |
aatatatgactgtactattatcctagtatcgcactttccaagtgaacttgttgctttgcttgatgtttaaggcggtgattaacttttaaaggaactaaca |
112 |
Q |
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| T |
3556880 |
aatatatgactgtactattatcctagtatcgcactttccaagtgaacttgttgctttgcttgatgtttaaggcggtgattaacttttaaaggaactaaca |
3556979 |
T |
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| Q |
113 |
tttatattttctactgcagcttatcatctgttttccattatactgactcaatttgaagttaatgtaatgaaaatggatcaacattgtaatatgcaaatga |
212 |
Q |
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| T |
3556980 |
tttatattttctactgcagcttatcatctgttttccattatactgactcaatttgaagttaatgtaatgaaaatggatcaacattgtaatatgcaaatga |
3557079 |
T |
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| Q |
213 |
cgccacctagtcaacaggggttttgaaggttgcaacaggttgacatactgcttgctgtttgtggtttgtt |
282 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3557080 |
cgccacctagtcaacaggggttgtgaaggttgcaacaggttgacatactgcttgctgtttgtggtttgtt |
3557149 |
T |
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