View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6944_high_9 (Length: 225)
Name: NF6944_high_9
Description: NF6944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6944_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 21400780 - 21400992
Alignment:
| Q |
1 |
ttttcgacgatcaacaacatttgtagagattggagaaagttctctagtaattaccagtttttccaacatgttttgaatttcatgctggataaatagggaa |
100 |
Q |
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| T |
21400780 |
ttttccacgatcaacaacatttgtagagattggagaaagttctctagtaattaccagtttttccaacatgttttgaatttcatgctggataaagagggaa |
21400879 |
T |
|
| Q |
101 |
aaggctcgatttctatctggaaacgaccccatcatcaagattgtggatgttatcattgcataatcatcgttcaagccattaagaaacaatatagtagaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21400880 |
aaggctcgatttctatctggaaacgaccccatcatcaagattgtggatgttatcattgcataatcatcgttcaagccattaagaaacaatatagtagaat |
21400979 |
T |
|
| Q |
201 |
cttcattatcaca |
213 |
Q |
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||||||||||||| |
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| T |
21400980 |
cttcattatcaca |
21400992 |
T |
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