View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6944_low_9 (Length: 258)
Name: NF6944_low_9
Description: NF6944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6944_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21400736 - 21400490
Alignment:
| Q |
1 |
ttgaagtgtgctacaagaaacgtggttaccctccagggctcaggaccgattcaatcaacatcagtcttgaggaatgcaaagcactcagtgcaatccttag |
100 |
Q |
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| T |
21400736 |
ttgaagtgtgctacaagaaacgtggttaccctccagggctcaggaccgattcaatcaacatcagtcttgaggaatgcaaagctctcagtgcaatccttag |
21400637 |
T |
|
| Q |
101 |
gaaatccgatgtcaagaattcagtagataagagtgcaaatcaagctactatttatgagttcacacagtttaaaggtaaactatgtgtgtcttgtaactct |
200 |
Q |
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|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21400636 |
gaaaaccgatgtctagaattcagtagataagagtgcaaatcaagctactatttatgagttcacacagtttaaaggtaaactatgtgtgtcttgtaactct |
21400537 |
T |
|
| Q |
201 |
atcaata-gtaatcttgatagtggggaaacatatcacatatgttttt |
246 |
Q |
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||||||| | | |||||||||||||||||||||||||||||||||| |
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| T |
21400536 |
atcaatatgaacacttgatagtggggaaacatatcacatatgttttt |
21400490 |
T |
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