View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6945_low_2 (Length: 467)

Name: NF6945_low_2
Description: NF6945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6945_low_2
NF6945_low_2
[»] chr7 (14 HSPs)
chr7 (16-449)||(841764-842197)
chr7 (16-449)||(848940-849373)
chr7 (16-449)||(1206944-1207377)
chr7 (139-428)||(16290694-16290983)
chr7 (139-428)||(801827-802116)
chr7 (268-446)||(23883312-23883490)
chr7 (268-446)||(42634783-42634961)
chr7 (268-437)||(8814027-8814196)
chr7 (262-440)||(9466044-9466222)
chr7 (262-440)||(30373472-30373650)
chr7 (262-440)||(16396975-16397153)
chr7 (139-224)||(30373349-30373434)
chr7 (139-215)||(9466269-9466345)
chr7 (139-224)||(16396852-16396937)
[»] chr5 (18 HSPs)
chr5 (68-446)||(29896700-29897078)
chr5 (139-428)||(34465156-34465445)
chr5 (239-446)||(22955460-22955667)
chr5 (268-446)||(1801700-1801878)
chr5 (268-446)||(7258459-7258637)
chr5 (268-446)||(7790396-7790574)
chr5 (268-446)||(12391950-12392128)
chr5 (139-440)||(5443607-5443908)
chr5 (262-440)||(36379496-36379674)
chr5 (262-440)||(37004168-37004346)
chr5 (262-440)||(17953561-17953739)
chr5 (139-440)||(11947806-11948107)
chr5 (139-440)||(31516769-31517070)
chr5 (262-440)||(15788247-15788425)
chr5 (139-224)||(15788124-15788209)
chr5 (139-224)||(36379373-36379458)
chr5 (139-224)||(37004045-37004130)
chr5 (139-215)||(17953786-17953862)
[»] chr1 (3 HSPs)
chr1 (68-446)||(2339796-2340174)
chr1 (268-446)||(6201487-6201665)
chr1 (139-440)||(5632524-5632825)
[»] chr6 (11 HSPs)
chr6 (96-446)||(2411975-2412325)
chr6 (239-446)||(20054609-20054816)
chr6 (268-446)||(20044396-20044574)
chr6 (268-446)||(16821526-16821704)
chr6 (268-446)||(24147211-24147389)
chr6 (268-446)||(27513527-27513705)
chr6 (268-437)||(619668-619837)
chr6 (96-449)||(2410265-2410615)
chr6 (262-440)||(9139923-9140101)
chr6 (139-215)||(9139800-9139876)
chr6 (91-184)||(20054515-20054608)
[»] scaffold0387 (1 HSPs)
scaffold0387 (153-446)||(5723-6016)
[»] chr2 (3 HSPs)
chr2 (196-428)||(21763993-21764225)
chr2 (139-440)||(22945855-22946156)
chr2 (139-440)||(12380120-12380421)
[»] chr3 (12 HSPs)
chr3 (139-428)||(41436774-41437063)
chr3 (139-428)||(20439609-20439898)
chr3 (140-446)||(15596422-15596728)
chr3 (268-446)||(6197981-6198159)
chr3 (268-446)||(8807897-8808075)
chr3 (268-446)||(15533637-15533815)
chr3 (268-446)||(21611327-21611505)
chr3 (268-446)||(46397011-46397189)
chr3 (101-446)||(15914993-15915338)
chr3 (268-446)||(8620021-8620200)
chr3 (139-440)||(46376735-46377036)
chr3 (139-440)||(5954354-5954655)
[»] scaffold0019 (2 HSPs)
scaffold0019 (239-446)||(17294-17501)
scaffold0019 (91-181)||(17200-17290)
[»] scaffold0183 (2 HSPs)
scaffold0183 (239-446)||(31810-32017)
scaffold0183 (72-184)||(32018-32130)
[»] scaffold0551 (2 HSPs)
scaffold0551 (268-446)||(9879-10057)
scaffold0551 (325-446)||(3822-3943)
[»] scaffold0435 (1 HSPs)
scaffold0435 (268-446)||(12431-12609)
[»] chr4 (7 HSPs)
chr4 (268-428)||(15575638-15575798)
chr4 (259-446)||(16724575-16724762)
chr4 (268-446)||(15899271-15899449)
chr4 (268-446)||(18039841-18040019)
chr4 (268-437)||(14920939-14921108)
chr4 (268-446)||(22707531-22707709)
chr4 (268-437)||(15571510-15571679)
[»] chr8 (1 HSPs)
chr8 (268-446)||(21479703-21479881)
[»] scaffold0094 (1 HSPs)
scaffold0094 (140-446)||(38771-39077)
[»] scaffold1197 (1 HSPs)
scaffold1197 (265-446)||(2106-2287)
[»] scaffold0029 (2 HSPs)
scaffold0029 (259-409)||(74786-74936)
scaffold0029 (139-440)||(25623-25924)
[»] scaffold0441 (1 HSPs)
scaffold0441 (268-409)||(10654-10795)
[»] scaffold0104 (1 HSPs)
scaffold0104 (239-446)||(28843-29050)
[»] scaffold0002 (1 HSPs)
scaffold0002 (139-440)||(302366-302667)
[»] scaffold0595 (1 HSPs)
scaffold0595 (139-440)||(9440-9742)


Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 449
Target Start/End: Complemental strand, 842197 - 841764
Alignment:
Q  16 tgtgatcgaggttgctgttgctgatacggttgctgctgatatggctgctcaagatactgttggaactgcggctgataacctggttgttgaatagcattgg 115  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  842197 tgtggtcgaggttgttgttgctgatacggttgctgctgatatggctgctgaggatactgttggaactgcggctgataacccggttgttcaatagcattgg 842098  T
Q  116 tagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaa 215  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  842097 tagcgggtgtaatggtagcaacatgttgataggctgtataattttgctgaggcctcccatgggccaccataccgacctctggtgctttctttcttgggaa 841998  T
Q  216 gttgttcccaaannnnnnngctccactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatc 315  Q
    ||| ||||||||       ||||||||  | |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  841997 gttattcccaaatttcttggctccactgtcggaagctccatctttaactaatcgtccttctcggactccttcttccaactgtacacccataccaaccatc 841898  T
Q  316 tctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgag 415  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |    
T  841897 tcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaactgattgagagtttttaagaagatcttggtcatctctttctcctctatacgtg 841798  T
Q  416 gactgacttgggccgcggtatctcttcatcgatg 449  Q
    | ||||||||||| ||||||||||| ||||||||    
T  841797 ggctgacttgggcagcggtatctctccatcgatg 841764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 449
Target Start/End: Complemental strand, 849373 - 848940
Alignment:
Q  16 tgtgatcgaggttgctgttgctgatacggttgctgctgatatggctgctcaagatactgttggaactgcggctgataacctggttgttgaatagcattgg 115  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  849373 tgtggtcgaggttgttgttgctgatacggttgctgctgatatggctgctgaggatactgttggaactgcggctgataacccggttgttcaatagcattgg 849274  T
Q  116 tagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaa 215  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  849273 tagcgggtgtaatggtagcaacatgttgataggctgtataattttgctgaggcctcccatgggccaccataccgacctctggtgctttctttcttgggaa 849174  T
Q  216 gttgttcccaaannnnnnngctccactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatc 315  Q
    ||| ||||||||       ||||||||  | |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  849173 gttattcccaaatttcttggctccactgtcggaagctccatctttaactaatcgtccttctcggactccttcttccaactgtacacccataccaaccatc 849074  T
Q  316 tctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgag 415  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |    
T  849073 tcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaactgattgagagtttttaagaagatcttggtcatctctttctcctctatacgtg 848974  T
Q  416 gactgacttgggccgcggtatctcttcatcgatg 449  Q
    | ||||||||||| ||||||||||| ||||||||    
T  848973 ggctgacttgggcagcggtatctctccatcgatg 848940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 449
Target Start/End: Complemental strand, 1207377 - 1206944
Alignment:
Q  16 tgtgatcgaggttgctgttgctgatacggttgctgctgatatggctgctcaagatactgttggaactgcggctgataacctggttgttgaatagcattgg 115  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  1207377 tgtggtcgaggttgttgttgctgatacggttgctgctgatatggctgctgaggatactgttggaactgcggctgataacccggttgttcaatagcattgg 1207278  T
Q  116 tagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaa 215  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  1207277 tagcgggtgtaatggtagcaacatgttgataggctgtataattttgctgaggcctcccatgggccaccataccgacctctggtgctttctttcttgggaa 1207178  T
Q  216 gttgttcccaaannnnnnngctccactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatc 315  Q
    ||| ||||||||       ||||||||  | |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  1207177 gttattcccaaatttcttggctccactgtcggaagctccatctttaactaatcgtccttctcggactccttcttccaactgtacacccataccaaccatc 1207078  T
Q  316 tctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgag 415  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |    
T  1207077 tcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaactgattgagagtttttaagaagatcttggtcatctctttctcctctatacgtg 1206978  T
Q  416 gactgacttgggccgcggtatctcttcatcgatg 449  Q
    | ||||||||||| ||||||||||| ||||||||    
T  1206977 ggctgacttgggcagcggtatctctccatcgatg 1206944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 139 - 428
Target Start/End: Original strand, 16290694 - 16290983
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||| ||||||| |||| |||||||| || |||||||||||||  ||||  |||||||||||||| |||| || ||| ||| |       | ||    
T  16290694 tgttgataggttggataagtttgctgaggccttccttgggccaccatactaacctcatgttctttctttctcgggatgtggttgccatatttcttggttc 16290793  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| | ||||||||||||||| ||||| ||||||||||| |||||| |||||||||| ||||||||||| ||||| ||  | |||||||||||| ||||    
T  16290794 cactggtagaagctccatcttttactaaacgtccttctcggactccttcttccaactgcacacccatgccgaccatttcagcgaagttcttgggcgtact 16290893  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggc 428  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |  |||||||| ||||||||||||||||| || |||||||||||    
T  16290894 tccgaccatcttctcgtagtagaactgactgagagtttttaagaaaagtttggtcatttccttctcttctatacgtgggctgacttgggc 16290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 139 - 428
Target Start/End: Original strand, 801827 - 802116
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||| ||||||| |||| |||| ||| || ||||||||||||   ||||  |||||||||||||| |||| || ||| ||| |       | ||    
T  801827 tgttgataggttggataagtttgctgagaccttccttgggccaccataataacctcatgttctttctttctcgggatgtggttgccatatttcttggttc 801926  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
     ||| | ||||||||||| ||| ||||| | ||||||||| |||||| ||||||| || ||||||||||||||||| ||  |||||||||||||| ||||    
T  801927 aactggtagaagctccattttttactaaacatccttctcggactccttcttccaattgcacacccatgccaaccatttcagcaaagttcttgggcgtact 802026  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggc 428  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||  |||||||| ||||||||||||||||| || |||||||||||    
T  802027 tccgaccatcttctcgtagtagaactgactgagagtttttaagaagagtttggtcatttccttctcttctatacgtgggctgacttgggc 802116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 23883312 - 23883490
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| || ||| ||||||||||||||||||| |||||||||||  |||| ||||||||| |||||||||||||||||| ||||||||| ||||    
T  23883312 cgtccttctcggaccccttcttccaactgtacacccataccaaccatctcagcaaaattcttgggcgtacttccgaccatcttcttgtagtagaactgat 23883411  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  23883412 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 23883490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 42634783 - 42634961
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  42634783 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 42634882  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  42634883 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 42634961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 437
Target Start/End: Complemental strand, 8814196 - 8814027
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| |||| |||| ||||    
T  8814196 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagcagaactgat 8814097  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatc 437  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| ||||||||    
T  8814096 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatc 8814027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 262 - 440
Target Start/End: Complemental strand, 9466222 - 9466044
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  |||| ||||||||||| | ||| || |    
T  9466222 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtactcccgaccatctttttgtaataaa 9466123  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| |||||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  9466122 aatgattcagagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtctct 9466044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 262 - 440
Target Start/End: Original strand, 30373472 - 30373650
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  |||||||||||||||| | ||| || |    
T  30373472 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtacttccgaccatctttttgtaataaa 30373571  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  30373572 aatgattcaaagtttttaggaagagcttggtcatctctttctcctcaatccgtgggctgacttgggcagcggtgtctct 30373650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 440
Target Start/End: Original strand, 16396975 - 16397153
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  |||| ||||||||||| | ||| || |    
T  16396975 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtactcccgaccatctttttgtaataaa 16397074  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  16397075 aatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtctct 16397153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 30373349 - 30373434
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttccc 224  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||    
T  30373349 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttccc 30373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 9466345 - 9466269
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaa 215  Q
    |||||||||||||||||| |||| |||||||| ||||| | |||||||||||| | ||| |||||||| || |||||    
T  9466345 tgttgataggctggataagtttgttgaggccttccatgagtcaccataccgacttcttgctctttcttcctcgggaa 9466269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 16396852 - 16396937
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttccc 224  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||| ||| | |||||||||||| || ||||| | ||||||    
T  16396852 tgttgataggctggataagtttgttgaggccctccatgagtcaccatactgacttcttgttctttcttcctcgggaaatggttccc 16396937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 68 - 446
Target Start/End: Complemental strand, 29897078 - 29896700
Alignment:
Q  68 gatactgttggaactgcggctgataacctggttgttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgagg 167  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||    
T  29897078 gatactgttggaactgcggctgataacccggttgttgaatagcattggtagcgggtgtaatggcagcaacatgctgataggctggataattttgctgagg 29896979  T
Q  168 cctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctccactagcagaagctccatctttaactaac 267  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||       ||||||||  | ||||||||||||||||||||     
T  29896978 cctcccatgggccaccataccgacctctggtgctttctttcttgggaagttgttcccaaatttcttggctccactgtcggaagctccatctttaactaat 29896879  T
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29896878 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaaatgat 29896779  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||    
T  29896778 tgagagtttttaagaagatcttggtcatctccttctcttctatacgtgggctgacttgggcagcggtatctctccatcg 29896700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 139 - 428
Target Start/End: Complemental strand, 34465445 - 34465156
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||| ||||||| |||| |||||||| || |||||||||||||  ||||  |||||||||||||| |||| || ||| ||| |       | ||    
T  34465445 tgttgataggttggataagtttgctgaggccttccttgggccaccatactaacctcatgttctttctttctcgggatgtggttgccatatttcttggttc 34465346  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| | |||| |||||||||| ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||| ||  ||||||| |||||| ||||    
T  34465345 cactggtagaaactccatcttttactaaacgtccttctcggactccttcttccaactgcacacccatgccaaccatttcagcaaagtttttgggcgtact 34465246  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggc 428  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |  |||||||| ||||||||||||||||| || |||||||||||    
T  34465245 tccgaccatcttctcgtagtagaactgactgagagtttttaagaaaagtttggtcatttccttctcttctatacgtgggctgacttgggc 34465156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 239 - 446
Target Start/End: Original strand, 22955460 - 22955667
Alignment:
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| ||||||| ||||| ||| ||||| ||||||||||| |||||| ||||||| ||||||||||| || ||||| ||| |||||||||||||| ||||    
T  22955460 cactggcagaagttccatttttgactaaacgtccttctcggactccttcttccaattgtacacccataccgaccatttctgcaaagttcttgggcgtact 22955559  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||| ||  |||||    
T  22955560 tccgaccatcttctcgtagtagaactgactaagagtttttaagaagaatttggtcatctccttctcttctatacgcgggctgacttgggcagcaatatct 22955659  T
Q  439 cttcatcg 446  Q
    || |||||    
T  22955660 ctccatcg 22955667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 1801878 - 1801700
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  1801878 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 1801779  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  1801778 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 1801700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 7258459 - 7258637
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  7258459 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 7258558  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  7258559 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 7258637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 7790574 - 7790396
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  7790574 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 7790475  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  7790474 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 7790396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 12391950 - 12392128
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| || ||| ||||||||||||||||||| |||||||||||  |||| ||||||||| |||||||||||||||||| ||||||||| ||||    
T  12391950 cgtccttctcggaccccttcttccaactgtacacccataccaaccatctcagcaaaattcttgggcgtacttccgaccatcttcttgtagtagaactgat 12392049  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  12392050 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 12392128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 139 - 440
Target Start/End: Original strand, 5443607 - 5443908
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||| ||||| | |||||||||||| | ||| |||||||| || ||||| | ||||||          |  |    
T  5443607 tgttgataggctggataagtttgttgaggccttccatgagtcaccataccgacttcttgctctttcttcctcgggaaatggttcccggtcttcttggtcc 5443706  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || | |||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  5443707 cactggcaggagttgcattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 5443806  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| |||||||||| ||||| |||||||||||| ||||| || ||||| || ||||||||||| ||||| |||    
T  5443807 cccgaccatctttttgtaataaaaatgattcagagtttttaggaagagcttggtcatctctttctcctcaatacgtgggctgacttgggcagcggtgtct 5443906  T
Q  439 ct 440  Q
    ||    
T  5443907 ct 5443908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 262 - 440
Target Start/End: Original strand, 36379496 - 36379674
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||| | ||| |||| ||  |||| ||||||||||| | |||||| |    
T  36379496 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctctgcgaagctctttggtgtactcccgaccatctttttgtagtaaa 36379595  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| |||||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  36379596 aatgatttagagtttttaggaagagcttggtcatctctttctcctcaatgcgtgggctgacttgggcagcggtgtctct 36379674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 262 - 440
Target Start/End: Original strand, 37004168 - 37004346
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||| | ||| |||| ||  |||| ||||||||||| | |||||| |    
T  37004168 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctctgcgaagctctttggtgtactcccgaccatctttttgtagtaaa 37004267  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| |||||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  37004268 aatgatttagagtttttaggaagagcttggtcatctctttctcctcaatgcgtgggctgacttgggcagcggtgtctct 37004346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 262 - 440
Target Start/End: Complemental strand, 17953739 - 17953561
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||| | ||| |||| ||  |||| ||||||||||| | ||| || |    
T  17953739 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctctgcgaagctctttggtgtactcccgaccatctttttgtaataaa 17953640  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  17953639 aatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtctct 17953561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 440
Target Start/End: Original strand, 11947806 - 11948107
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||          |  |    
T  11947806 tgttgataggctggataagtttgttgaggccctccatgtgtcaccataccgacttcttgttctttcttcctcgggaaatggttcccggtcttcttggtcc 11947905  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  11947906 cactggcaggagttgtattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 11948005  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  11948006 cccgaccatctttttgtaataaaaatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtct 11948105  T
Q  439 ct 440  Q
    ||    
T  11948106 ct 11948107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 440
Target Start/End: Complemental strand, 31517070 - 31516769
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||          |  |    
T  31517070 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttcccggtcttcttggtcc 31516971  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  31516970 cactggcaggagttgtattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 31516871  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  31516870 cccgaccatctttttgtaataaaaatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtct 31516771  T
Q  439 ct 440  Q
    ||    
T  31516770 ct 31516769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 440
Target Start/End: Original strand, 15788247 - 15788425
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  |||| ||||||||||| | ||| || |    
T  15788247 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtactcccgaccatctttttgtaataaa 15788346  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  15788347 aatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtctct 15788425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 15788124 - 15788209
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttccc 224  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||    
T  15788124 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttccc 15788209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 36379373 - 36379458
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttccc 224  Q
    ||||| |||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||    
T  36379373 tgttggtaggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttccc 36379458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 37004045 - 37004130
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttccc 224  Q
    ||||| |||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||    
T  37004045 tgttggtaggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttccc 37004130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 17953862 - 17953786
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaa 215  Q
    |||||||||||||||||| |||| |||||| | ||||| | |||||||||||| | ||| |||||||| || |||||    
T  17953862 tgttgataggctggataagtttgttgaggcattccatgagtcaccataccgacttcttgctctttcttcctcgggaa 17953786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 68 - 446
Target Start/End: Original strand, 2339796 - 2340174
Alignment:
Q  68 gatactgttggaactgcggctgataacctggttgttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgagg 167  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || |||||||||||| |||||||||||||| |||||    
T  2339796 gatactgttggaactgcggctgataacccggttgttgaatagcattggtagcgggcgtaatggcagcaacatgttgataagctggataattttgctgagg 2339895  T
Q  168 cctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctccactagcagaagctccatctttaactaac 267  Q
    ||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||       ||||||||  | ||||||||||||||||||||     
T  2339896 cctcccatgggccaccataccgacctccggtgctttctttcttgggaagttgttcccaaatttcttagctccactgtcggaagctccatctttaactaat 2339995  T
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2339996 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaaatgat 2340095  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||    
T  2340096 tgagagtttttaagaagatcttggtcatctccttctcttctatacgtgggctgacttgggcagcggtatctctccatcg 2340174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 6201487 - 6201665
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||| || || |||||||||||  |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  6201487 cgtccttctcggactccttcttccaattgtacgcctataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaactgat 6201586  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    | || ||||||||||||| |||| ||||||| |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  6201587 taagggtttttaagaagagcttgatcatctctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 6201665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 440
Target Start/End: Original strand, 5632524 - 5632825
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||          |  |    
T  5632524 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttcccggtcttcttggtcc 5632623  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||| ||  | ||| |||| ||  ||||    
T  5632624 cactggcaggagttgtattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatttccgcgaagctctttggtgtact 5632723  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| |||||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  5632724 cccgaccatctttttgtaataaaaatgatttagagtttttaggaagagcttggtcatctctttctcctcaatgcgtgggctgacttgggcagcggtgtct 5632823  T
Q  439 ct 440  Q
    ||    
T  5632824 ct 5632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 96 - 446
Target Start/End: Complemental strand, 2412325 - 2411975
Alignment:
Q  96 tggttgttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctat 195  Q
    |||| |||||||| |||||| |||  |||| |||| || ||| |||||||| | ||||||| | |||||||||||||||||||| |||||||  || | |    
T  2412325 tggtggttgaataacattggcagcaagtgtgatggcagcaacgtgttgataagttggataagtctgatgaggcctcccatgggctaccatactaacttct 2412226  T
Q  196 tgttctttctttcttgggaagttgttcccaaannnnnnngctccactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaact 295  Q
    |||||||| ||||||||||| | ||||||| |       | |||||  | ||||| |||| | || ||||| ||||||||||| |||||| |||||||||    
T  2412225 tgttctttttttcttgggaaatggttcccatatttcttggttccacaggtagaagttccaccctttactaaacgtccttctcgcactccttcttccaact 2412126  T
Q  296 gtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcat 395  Q
    |||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  2412125 gtacacccataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaactgattgagagtttttaagaaaagcttggtcat 2412026  T
Q  396 ctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    ||  || ||||||||||| ||||| |||||||| ||||||||||| |||||    
T  2412025 ctttttttcttctatacgcggactaacttgggcagcggtatctctccatcg 2411975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 239 - 446
Target Start/End: Original strand, 20054609 - 20054816
Alignment:
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| ||||||| | ||||| ||||||| ||||||||||| |||||| ||||||||||||||||||| || ||||||||  |||||||||||||| ||||    
T  20054609 cactggcagaagtttcatctctaactaaacgtccttctcggactccttcttccaactgtacacccataccgaccatctcagcaaagttcttgggcgtact 20054708  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||| ||  ||  |||||||||| | ||||||     
T  20054709 tccgaccatcttctcgtagtagaactgattgagagtttttaagaagagtttggtcatctctttctcttctacacacgggatgacttgggcagtggtatcc 20054808  T
Q  439 cttcatcg 446  Q
    || |||||    
T  20054809 ctccatcg 20054816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 20044396 - 20044574
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  20044396 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 20044495  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  20044496 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 20044574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 16821526 - 16821704
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| || ||| ||||||||||||||||||| |||||||||||  |||| ||||||||| |||||||||||||||||| ||||||||| ||||    
T  16821526 cgtccttctcggaccccttcttccaactgtacacccataccaaccatctcagcaaaattcttgggcgtacttccgaccatcttcttgtagtagaactgat 16821625  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    ||||||||||||||||||  |||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  16821626 tgagagtttttaagaagaggttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 16821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 24147211 - 24147389
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  24147211 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 24147310  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| | | || ||||||||||| |||||||| || |||||    
T  24147311 tgagagtttttaagaagagcttggtcatttctttctcttctacatgcgggctgacttgggcagcggtatccctccatcg 24147389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 27513705 - 27513527
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||| ||||    
T  27513705 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggtgtacttccgaccatcttctcgtagtagaactgat 27513606  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    | |||||||||||||||| |||||||||||| |||||||||| ||| ||  ||||||| || |||||||| || |||||    
T  27513605 taagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgagcagcggtatccctccatcg 27513527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 437
Target Start/End: Original strand, 619668 - 619837
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| |||| |||| ||||    
T  619668 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagcagaactgat 619767  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatc 437  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| ||||||||    
T  619768 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatc 619837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 96 - 449
Target Start/End: Original strand, 2410265 - 2410615
Alignment:
Q  96 tggttgttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctat 195  Q
    |||| |||||||| | |||| ||| ||||| || | || ||| |||||||| | ||||||| | || | ||||||||||||||| |||||||  || | |    
T  2410265 tggtggttgaataactttggcagcaggtgtgatagcagcaacgtgttgataagttggataagtctgctaaggcctcccatgggctaccatactaacttct 2410364  T
Q  196 tgttctttcttt-cttgggaagttgttcccaaannnnnnngctccactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaac 294  Q
    |||||||| ||| || | ||||| ||||||| |       | |||||| | |||||||||||| || ||||| ||||||| ||  | |||| ||||||||    
T  2410365 tgttcttttttttctcgagaagtggttcccatatttcttggttccactggtagaagctccatcctttactaaacgtccttttcagattccttcttccaac 2410464  T
Q  295 tgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtca 394  Q
    ||||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||    | | |||||||||||||||| ||||||||||    
T  2410465 tgtacacccataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagta----taactgagagtttttaagaaaatcttggtca 2410560  T
Q  395 tctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcgatg 449  Q
    |||| || ||||||||||| || || |||||||  || |||||||| ||||||||    
T  2410561 tctctttttcttctatacgcgggctaacttgggtagcagtatctctccatcgatg 2410615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 440
Target Start/End: Original strand, 9139923 - 9140101
Alignment:
Q  262 actaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtaga 361  Q
    ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  |||| ||||||||||| | ||| || |    
T  9139923 actaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtactcccgaccatctttttgtaataaa 9140022  T
Q  362 attgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctct 440  Q
    | ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  9140023 aatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtctct 9140101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 9139800 - 9139876
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaa 215  Q
    |||||||||||||||||| |||| |||||| | ||||| | |||||||||||| | ||| |||||||| || |||||    
T  9139800 tgttgataggctggataagtttgttgaggcattccatgagtcaccataccgacttcttgctctttcttcctcgggaa 9139876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 20054515 - 20054608
Alignment:
Q  91 taacctggttgttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggccacca 184  Q
    ||||| || |||||||| ||| ||| ||||||||| |  |||| |||||||||||  || | ||| ||||| |||||||| |||||||||||||    
T  20054515 taacccggctgttgaatggcactggcagcgggtgtgactgtagcaacatgttgatgagccgaatatttttgttgaggccttccatgggccacca 20054608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 141; Significance: 9e-74; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 153 - 446
Target Start/End: Original strand, 5723 - 6016
Alignment:
Q  153 ataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctccactagcagaagct 252  Q
    |||| |||| ||||| || |||||||||||||||| ||||| |||||||||||||||||||| || |||||| ||       | |||||| | ||||| |    
T  5723 ataagtttgctgaggtcttccatgggccaccatactgacctcttgttctttctttcttgggaggtggttcccgaatttcttggttccactggaagaagtt 5822  T
Q  253 ccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttct 352  Q
     |||| || ||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||  | ||||| |||||| ||||||||||||||||||    
T  5823 acatcctttactaaacgtccttctcggactccttcttccaactgtacacccataccaaccatctcagcgaagtttttgggcgtacttccgaccatcttct 5922  T
Q  353 cgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||| |  ||||||||||| |||||||||||||||||    
T  5923 cgtagtagaactgatttagagtttttaagaagagcttggtcatctctttctcttctatacgtgagctgacttgggcagcggtatctcttcatcg 6016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 196 - 428
Target Start/End: Original strand, 21763993 - 21764225
Alignment:
Q  196 tgttctttctttcttgggaagttgttcccaaannnnnnngctccactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaact 295  Q
    |||||||||||||||||||||| |||||||||       | |||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  21763993 tgttctttctttcttgggaagtggttcccaaatttcttggttccactagcagaagctccatcttttactaaacgtccttctcggactccttcttccaact 21764092  T
Q  296 gtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcat 395  Q
    | |||||||| |||||||||||  | |||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||    
T  21764093 gcacacccataccaaccatctcagcgaagttcttgggcgtacttccgaccatcttctcgtagtagaactgactaagagtttttaagaagagtttggtcat 21764192  T
Q  396 ctccttctcttctatacgaggactgacttgggc 428  Q
     ||||||||||||||||| || |||||||||||    
T  21764193 ttccttctcttctatacgcgggctgacttgggc 21764225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 440
Target Start/End: Complemental strand, 22946156 - 22945855
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||| ||||| | |||||||||||| | ||| |||||||| || ||||| | ||||||          |  |    
T  22946156 tgttgataggctggataagtttgttgaggccttccatgagtcaccataccgacttcttgctctttcttcctcgggaaatggttcccggtcttcttggtcc 22946057  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || | |||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  22946056 cactggcaggagttgcattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 22945957  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| |||||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  22945956 cccgaccatctttttgtaataaaaatgattcagagtttttaggaagagcttggtcatctctttctcctcaatgcgtgggctgacttgggcagcggtgtct 22945857  T
Q  439 ct 440  Q
    ||    
T  22945856 ct 22945855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 440
Target Start/End: Complemental strand, 12380421 - 12380120
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||          |  |    
T  12380421 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttcccggtcttcttggtcc 12380322  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  12380321 cactggcaggagttgtattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 12380222  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  12380221 cccgaccatctttttgtaataaaaatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtct 12380122  T
Q  439 ct 440  Q
    ||    
T  12380121 ct 12380120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 139 - 428
Target Start/End: Complemental strand, 41437063 - 41436774
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||| ||||||| |||| |||||||| || ||||||||||||| |||||  |||||||||||||| |||| || ||| ||| |       | ||    
T  41437063 tgttgataggttggataagtttgctgaggccttccttgggccaccatactgacctcatgttctttctttctcgggatgtggttgccatatttcttggttc 41436964  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| | |||| |||||||||| ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||| ||  ||||||| |||||| ||||    
T  41436963 cactggtagaaactccatcttttactaaacgtccttctcggactccttcttccaactgcacacccatgccaaccatttcagcaaagtttttgggcgtact 41436864  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggc 428  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |  |||||||| ||||||||||||||||| || |||||||||||    
T  41436863 tccgaccatcttctcgtagtagaactgactgagagtttttaagaaaagtttggtcatttccttctcttctatacgtgggctgacttgggc 41436774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 139 - 428
Target Start/End: Complemental strand, 20439898 - 20439609
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||| ||||||| |||| |||||||| || |||||||||||||  ||||  |||||||||||||| |||| || ||| ||| |       | ||    
T  20439898 tgttgataggttggataagtttgctgaggccttccttgggccaccatactaacctcatgttctttctttctcgggatgtggttgccatatttcttggttc 20439799  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| | |||| |||||||||| ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||| ||  ||||||| |||||| ||||    
T  20439798 cactggtagaaactccatcttttactaaacgtccttctcggactccttcttccaactgcacacccatgccaaccatttcagcaaagtttttgggcgtact 20439699  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggc 428  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |  |||||||| ||||||||||||||||| || |||||||||||    
T  20439698 tccgaccatcttctcgtagtagaactgactgagagtttttaagaaaagtttggtcatttccttctcttctatacgtgggctgacttgggc 20439609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 140 - 446
Target Start/End: Original strand, 15596422 - 15596728
Alignment:
Q  140 gttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctcc 239  Q
    ||||||||  ||||||| |||| ||||  || ||||| |||||||||||||| | |||||||||||||||||||| ||   |||| ||       | |||    
T  15596422 gttgatagattggataagtttgttgagatcttccatgagccaccataccgacttcttgttctttctttcttgggaggtgactcccgaatttcttggttcc 15596521  T
Q  240 actagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatactt 339  Q
    ||| ||||||| | ||||||| ||||| ||||||| ||| || ||| |||||||||| |||||||| |||||||||||  |||||||||||||| |||||    
T  15596522 actggcagaagttgcatcttttactaaacgtccttgtcggaccccttcttccaactgcacacccataccaaccatctcagcaaagttcttgggcgtactt 15596621  T
Q  340 ccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctc 439  Q
    || |||||| | |||||||||||    ||||||||||||||||||| ||||||||||||||| || |||||||| ||  |||||||||| ||||||||||    
T  15596622 ccaaccatcctttcgtagtagaaagagttgagagtttttaagaagagcttggtcatctccttttcctctatacgcgggttgacttgggcagcggtatctc 15596721  T
Q  440 ttcatcg 446  Q
    | |||||    
T  15596722 tccatcg 15596728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 6198159 - 6197981
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  6198159 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 6198060  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  6198059 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 6197981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 8808075 - 8807897
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| || ||| ||||||||||||||||||| |||||||||||  |||| ||||||||| |||||||||||||||||| ||||||||| ||||    
T  8808075 cgtccttctcggaccccttcttccaactgtacacccataccaaccatctcagcaaaattcttgggcgtacttccgaccatcttcttgtagtagaactgat 8807976  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  8807975 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 8807897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 15533637 - 15533815
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  15533637 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 15533736  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  15533737 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 15533815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 21611505 - 21611327
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| || ||| ||||||||||||||||||| |||||||||||  |||| ||||||||| |||||||||||||||||| ||||||||| ||||    
T  21611505 cgtccttctcggaccccttcttccaactgtacacccataccaaccatctcagcaaaattcttgggcgtacttccgaccatcttcttgtagtagaactgat 21611406  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  21611405 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 21611327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 46397011 - 46397189
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  46397011 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 46397110  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  46397111 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 46397189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 101 - 446
Target Start/End: Complemental strand, 15915338 - 15914993
Alignment:
Q  101 gttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttc 200  Q
    ||||||||| || ||| |||||||| || | || |||  ||||||||  ||||||| |||| ||||| || ||||| |||||||||| ||| | ||||||    
T  15915338 gttgaatagtatgggtggcgggtgtgatagcagcaacgggttgatagattggataagtttgttgaggtcttccatgagccaccatactgacttcttgttc 15915239  T
Q  201 tttctttcttgggaagttgttcccaaannnnnnngctccactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtaca 300  Q
    |||||||||||||| ||   |||| ||       | |||||| ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||||| |||    
T  15915238 tttctttcttgggaggtgactcccgaatttcttggttccactggcagaagttgcatcttttactaaacgtccttctcggaccccttcttccaactgcaca 15915139  T
Q  301 cccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctcct 400  Q
    ||||| |||||||||||  |||||||||||||| ||||||| |||||| | |||||||||||    |||||||||||||||||||  |||||||||||||    
T  15915138 cccataccaaccatctcagcaaagttcttgggcgtacttccaaccatcctttcgtagtagaaagagttgagagtttttaagaagagtttggtcatctcct 15915039  T
Q  401 tctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    | || |||||||  ||  |||||||||| | ||||||||| |||||    
T  15915038 tttcctctatacacgggttgacttgggcagtggtatctctccatcg 15914993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 8620200 - 8620021
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  8620200 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 8620101  T
Q  368 tgagagt-ttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    ||||||| ||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  8620100 tgagagttttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 8620021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 139 - 440
Target Start/End: Complemental strand, 46377036 - 46376735
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||          |  |    
T  46377036 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttcccggtcttcttggtcc 46376937  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  46376936 cactggcaggagttgtattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 46376837  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| |||||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  46376836 cccgaccatctttttgtaataaaaatgatttagagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtct 46376737  T
Q  439 ct 440  Q
    ||    
T  46376736 ct 46376735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 139 - 440
Target Start/End: Original strand, 5954354 - 5954655
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||          |  |    
T  5954354 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttcccggtcttcttggtcc 5954453  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| ||||| || ||||| |||||||||||  | ||| |||| ||  ||||    
T  5954454 cactggcaggagttgtattctttactaagcgtccttctcggactccttcttctaactggactcccataccaaccatctccgcgaagctctttggtgtact 5954553  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  5954554 cccgaccatctttttgtaataaaaatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtct 5954653  T
Q  439 ct 440  Q
    ||    
T  5954654 ct 5954655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 239 - 446
Target Start/End: Original strand, 17294 - 17501
Alignment:
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| ||||||| ||||||| | ||||| ||||||||||| |||||| ||||||||||||||||||| || ||||| ||| |||||||||||||| || |    
T  17294 cactggcagaagttccatctctgactaaacgtccttctcggactccttcttccaactgtacacccataccgaccatttctgcaaagttcttgggcgtatt 17393  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||  |||||||||||||||||||||||||| || |||| |||||| || ||||||    
T  17394 tccgaccatcttctcgtagtagaactgatcaagagtttttaagaagagtttggtcatctccttctcttctatacgcgggctgatttgggcagcagtatct 17493  T
Q  439 cttcatcg 446  Q
    || |||||    
T  17494 ctccatcg 17501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 17200 - 17290
Alignment:
Q  91 taacctggttgttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctcccatgggcca 181  Q
    ||||||||||||||||| ||||||||||||||||| |  | || ||| |||||||| || | ||| ||||| |||||||||||||| ||||    
T  17200 taacctggttgttgaatggcattggtagcgggtgtgactgcagcaacgtgttgataagccgaatatttttgttgaggcctcccatgcgcca 17290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 108; Significance: 5e-54; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 239 - 446
Target Start/End: Complemental strand, 32017 - 31810
Alignment:
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| ||||||| ||||||| ||||||| ||||||||||| | |||| ||||||||||||| ||||| |  ||||| ||| |||||||||||||| ||||    
T  32017 cactggcagaagttccatctctaactaaacgtccttctcggattccttcttccaactgtacgcccatactgaccatttctgcaaagttcttgggcgtact 31918  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||| || || |||    
T  31917 tccgaccatcctctcgtagtagaattgatcaagagtttttaagaagagtttggtcatctccttctcttctatacgcgggctgacttgggcagcagtgtct 31818  T
Q  439 cttcatcg 446  Q
    || |||||    
T  31817 ctccatcg 31810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 32130 - 32018
Alignment:
Q  72 ctgttggaactgcggctgataacctggttgttgaatagcattggtagcgggtgtaatggtagaaacatgttgataggctggataattttgatgaggcctc 171  Q
    ||||||||  || ||||||||||| || |||||||| ||||||| ||||||||| || | || ||| |||||||  || | ||| ||||| ||||||||     
T  32130 ctgttggagttgtggctgataacccggctgttgaatggcattggcagcgggtgtgattgcagcaacgtgttgatgagccgaatatttttgttgaggcctt 32031  T
Q  172 ccatgggccacca 184  Q
    |||||||||||||    
T  32030 ccatgggccacca 32018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 9879 - 10057
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  9879 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggcgtacttctgaccatcttctcgtagtagaactgat 9978  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  9979 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 3822 - 3943
Alignment:
Q  325 ttcttgggcatacttccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgactt 424  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| ||| ||  ||||||    
T  3822 ttcttgggcgtacttctgaccatcttctcgtagtagaactgattgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgactt 3921  T
Q  425 gggccgcggtatctcttcatcg 446  Q
    |||| |||||||| || |||||    
T  3922 gggcagcggtatccctccatcg 3943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 12431 - 12609
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  12431 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaactgat 12530  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    | |||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| ||| ||||||| |||||    
T  12531 taagagtttttaagaagagcttggtcatatctttctcttctacacgcgggctgacttgggcagcgatatctctccatcg 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 268 - 428
Target Start/End: Original strand, 15575638 - 15575798
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  15575638 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagtagaactgat 15575737  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggc 428  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  ||||||||||    
T  15575738 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggc 15575798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 259 - 446
Target Start/End: Original strand, 16724575 - 16724762
Alignment:
Q  259 ttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagt 358  Q
    ||||| || ||||||||||| |||||| ||||||| ||||| ||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  16724575 ttaaccaatcgtccttctcggactccttcttccaattgtacgcccataccaaccatctcagcaaagttcttgggcgtacttccgaccatcttctcgtagt 16724674  T
Q  359 agaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||| ||  ||  |||||||||| |||||||| || |||||    
T  16724675 agaactgattgagagtttttaagaagagcttggtcatctctttctcttctacactcgggatgacttgggcagcggtatccctccatcg 16724762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 15899271 - 15899449
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||  ||||    
T  15899271 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggtgtacttccgaccatcttctcgtagtagatctgat 15899370  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    ||||||||||||| |||| |||||||||||| |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  15899371 tgagagtttttaaaaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 15899449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 18040019 - 18039841
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||| ||||    
T  18040019 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggtgtacttccgaccatcttctcgtagtagaactgat 18039920  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    | |||||||||||||||| |||||||||||| |||||||||| ||| ||  ||||||| || |||||||| || |||||    
T  18039919 taagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgagcagcggtatccctccatcg 18039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 437
Target Start/End: Complemental strand, 14921108 - 14920939
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||   ||||||||||||||||||||||||||| ||||    
T  14921108 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggtgcacttccgaccatcttctcgtagtagaactgat 14921009  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatc 437  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  |||||||||| ||| ||||    
T  14921008 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcgatatc 14920939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 22707709 - 22707531
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |  ||| ||||||||||||||||||| |||||||||||  |||| ||||||||| |||||||||||||||||| ||||||||| ||||    
T  22707709 cgtccttctcggatcccttcttccaactgtacacccataccaaccatctcagcaaaattcttgggcgtacttccgaccatcttcttgtagtagaactgat 22707610  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| ||  |||||||||| |||||||| || |||||    
T  22707609 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggatgacttgggcagcggtatccctccatcg 22707531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 268 - 437
Target Start/End: Original strand, 15571510 - 15571679
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||||||||| ||||| |||||||||||  |||||||||||||   ||||| ||||||||||||||||||||| ||||    
T  15571510 cgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggagaacttcagaccatcttctcgtagtagaactgat 15571609  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatc 437  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||  |||||||||| ||| ||||    
T  15571610 tgagagtttttaagaagagcttggtcatctctttctcttctacacgcgggatgacttgggcagcgatatc 15571679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 446
Target Start/End: Original strand, 21479703 - 21479881
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||||||||| ||||||||| ||||    
T  21479703 cgtccttctcggactccttcttccaattgtacacccataccaaccatctcagcaaagttcttgggcgtgcttccgaccatcttcttgtagtagaactgat 21479802  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||| || ||||||||||| |||||||| || |||||    
T  21479803 tgagagtttttaagaagagcttggtcatttctttctcttctacacgcgggctgacttgggcagcggtatccctccatcg 21479881  T

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Target: scaffold0094 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 140 - 446
Target Start/End: Original strand, 38771 - 39077
Alignment:
Q  140 gttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctcc 239  Q
    ||||||||  ||||||| |||| ||||| || ||||| |||||||||| ||| | |||||||||||||||||||| ||   |||| ||       | |||    
T  38771 gttgatagattggataagtttgttgaggtcttccatgagccaccatactgacttcttgttctttctttcttgggaggtgactcccgaatttcttggttcc 38870  T
Q  240 actagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatactt 339  Q
    ||| ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||||||||||||| |||||    
T  38871 actggcagaagttgcatcttttactaaacgtccttctcggaccccttcttccaactgcacacccataccaaccatctcagcaaagttcttgggcgtactt 38970  T
Q  340 ccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctc 439  Q
    || |||||| | |||||||||||    |||||||||||||||||||  |||||||||||||| || |||||||| ||  |||||||||| | ||||||||    
T  38971 ccaaccatcctttcgtagtagaaagagttgagagtttttaagaagagtttggtcatctccttttcctctatacgcgggttgacttgggcagtggtatctc 39070  T
Q  440 ttcatcg 446  Q
    | |||||    
T  39071 tccatcg 39077  T

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Target: scaffold1197 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold1197
Description:

Target: scaffold1197; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 265 - 446
Target Start/End: Complemental strand, 2287 - 2106
Alignment:
Q  265 aaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaatt 364  Q
    |||||||||||||| |||||| ||||||||||||| ||||| |||||||||||  ||||||||| |||| |||||||||||||||||||||||||||| |    
T  2287 aaccgtccttctcggactccttcttccaactgtacgcccataccaaccatctcagcaaagttctagggcgtacttccgaccatcttctcgtagtagaact 2188  T
Q  365 gattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatctcttcatcg 446  Q
    ||||||||||||||||||||| |||||||||||| || ||||||| ||| ||  ||||||| || ||| |||| || |||||    
T  2187 gattgagagtttttaagaagagcttggtcatctctttttcttctacacgcgggatgacttgtgcagcgttatccctccatcg 2106  T

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Target: scaffold0029 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 259 - 409
Target Start/End: Complemental strand, 74936 - 74786
Alignment:
Q  259 ttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagt 358  Q
    ||||| || ||||||||||| |||||| ||||||| ||||| ||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||||    
T  74936 ttaaccaatcgtccttctcggactccttcttccaattgtacgcccataccaaccatctcagcaaagttcttgggcgtactgccgaccatcttctcgtagt 74837  T
Q  359 agaattgattgagagtttttaagaagatcttggtcatctccttctcttcta 409  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  74836 agaactgattgagagtttttaagaagagcttggtcatctctttctcttcta 74786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 139 - 440
Target Start/End: Complemental strand, 25924 - 25623
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||| ||||| | |||||||||||| | ||| |||||||| || ||||| |  |||||          |  |    
T  25924 tgttgataggctggataagtttgttgaggccttccatgagtcaccataccgacttcttgctctttcttcctcgggaaatgattcccggtcttcttggtcc 25825  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || | |||| || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  25824 cactggcaggagttgcatcctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 25725  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  25724 cccgaccatctttttgtaataaaaatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtct 25625  T
Q  439 ct 440  Q
    ||    
T  25624 ct 25623  T

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Target: scaffold0441 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 268 - 409
Target Start/End: Complemental strand, 10795 - 10654
Alignment:
Q  268 cgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatacttccgaccatcttctcgtagtagaattgat 367  Q
    |||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  10795 cgtctttctcgtactccttcttccaactgtacgcccataccaaccatctcagcaaagttcttgggtgtacttccgtccatcttctcgtagtagaactgat 10696  T
Q  368 tgagagtttttaagaagatcttggtcatctccttctcttcta 409  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  10695 tgagagtttttaagaagagcttggtcatctctttctcttcta 10654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 239 - 446
Target Start/End: Original strand, 28843 - 29050
Alignment:
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| ||||||| || |||| ||||||| ||||||||||| ||||||  ||||||||||||  |||| |||||||||||  |||||||||||||| ||||    
T  28843 cactggcagaagttctatctctaactaaacgtccttctcggactcctttttccaactgtacgtccataccaaccatctcagcaaagttcttgggcgtact 28942  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacg-aggactgacttgggccgcggtatc 437  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||| ||||||| |  ||| |||| |||||||||| ||||||||    
T  28943 tccgaccatcttctcgtagtagaactgattgagggtttttaagaagagtttggtcatctctttctcttatgcacgcagga-tgacttgggcagcggtatc 29041  T
Q  438 tcttcatcg 446  Q
     || |||||    
T  29042 cctccatcg 29050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 440
Target Start/End: Complemental strand, 302667 - 302366
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || ||||| | ||||||          |  |    
T  302667 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcgggaaatggttcccggtcttcttggtcc 302568  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  302567 cactggcaggagttgtattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 302468  T
Q  339 tccgaccatcttctcgtagtagaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatct 438  Q
     ||||||||||| | ||| || || ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| |||    
T  302467 cccgaccatctttttgtaataaaaatgattcaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtct 302368  T
Q  439 ct 440  Q
    ||    
T  302367 ct 302366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 440
Target Start/End: Complemental strand, 9742 - 9440
Alignment:
Q  139 tgttgataggctggataattttgatgaggcctcccatgggccaccataccgacctattgttctttctttcttgggaagttgttcccaaannnnnnngctc 238  Q
    |||||||||||||||||| |||| |||||||  ||||| | |||||||||||| | |||||||||||| || || || | ||||||          |  |    
T  9742 tgttgataggctggataagtttgttgaggccctccatgagtcaccataccgacttcttgttctttcttcctcggaaaatggttcccggtcttcttggtcc 9643  T
Q  239 cactagcagaagctccatctttaactaaccgtccttctcgtactcctccttccaactgtacacccatgccaaccatctctccaaagttcttgggcatact 338  Q
    |||| |||| || |  ||  || ||||| ||||||||||| |||||| |||| |||||||| ||||| |||||||||||  | ||| |||| ||  ||||    
T  9642 cactggcaggaggtgtattctttactaagcgtccttctcggactccttcttctaactgtactcccataccaaccatctccgcgaagctctttggtgtact 9543  T
Q  339 tccgaccatcttctcgtagt-agaattgattgagagtttttaagaagatcttggtcatctccttctcttctatacgaggactgacttgggccgcggtatc 437  Q
     || |||||||| | ||| | | || ||||| | |||||||| ||||| |||||||||||| ||||| || || || || ||||||||||| ||||| ||    
T  9542 cccaaccatctttttgtaataaaaaatgatttaaagtttttaggaagagcttggtcatctctttctcctcaattcgtgggctgacttgggcagcggtgtc 9443  T
Q  438 tct 440  Q
    |||    
T  9442 tct 9440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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