View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6946_low_13 (Length: 264)

Name: NF6946_low_13
Description: NF6946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6946_low_13
NF6946_low_13
[»] chr4 (33 HSPs)
chr4 (6-204)||(25843416-25843614)
chr4 (147-203)||(4329717-4329773)
chr4 (220-264)||(25843380-25843424)
chr4 (149-202)||(23553694-23553747)
chr4 (147-202)||(35999946-36000001)
chr4 (145-203)||(29190813-29190871)
chr4 (147-204)||(27019382-27019439)
chr4 (148-203)||(47326892-47326947)
chr4 (148-203)||(47341688-47341743)
chr4 (147-202)||(54495636-54495691)
chr4 (147-193)||(27362524-27362570)
chr4 (147-204)||(17409946-17410003)
chr4 (147-204)||(18882266-18882323)
chr4 (149-202)||(48910803-48910856)
chr4 (147-203)||(10813493-10813549)
chr4 (147-203)||(23051381-23051437)
chr4 (147-191)||(33632202-33632246)
chr4 (147-203)||(41415556-41415612)
chr4 (147-203)||(49228777-49228833)
chr4 (137-196)||(3085800-3085859)
chr4 (148-191)||(23545611-23545654)
chr4 (148-191)||(46803934-46803977)
chr4 (149-191)||(16667385-16667427)
chr4 (8-70)||(18812575-18812637)
chr4 (148-189)||(4779436-4779477)
chr4 (147-204)||(19450899-19450956)
chr4 (147-204)||(19468316-19468373)
chr4 (147-204)||(44916642-44916699)
chr4 (149-198)||(49250336-49250385)
chr4 (147-203)||(7349811-7349867)
chr4 (147-203)||(9759141-9759197)
chr4 (151-191)||(24684972-24685012)
chr4 (147-203)||(39876953-39877009)
[»] chr6 (23 HSPs)
chr6 (146-203)||(31568232-31568289)
chr6 (149-203)||(6016979-6017033)
chr6 (142-203)||(3261201-3261262)
chr6 (147-203)||(3853066-3853122)
chr6 (143-194)||(32614939-32614990)
chr6 (145-191)||(29065422-29065468)
chr6 (145-191)||(29120275-29120321)
chr6 (148-193)||(10887162-10887207)
chr6 (146-191)||(29863300-29863345)
chr6 (147-204)||(34692476-34692533)
chr6 (147-203)||(14228125-14228181)
chr6 (147-203)||(17596464-17596520)
chr6 (147-203)||(28943768-28943824)
chr6 (147-203)||(31169762-31169818)
chr6 (147-203)||(33017847-33017903)
chr6 (148-191)||(29074438-29074481)
chr6 (148-191)||(29079202-29079245)
chr6 (148-191)||(29107011-29107054)
chr6 (147-193)||(18332687-18332733)
chr6 (149-203)||(31069583-31069637)
chr6 (147-191)||(2830680-2830724)
chr6 (147-191)||(13391810-13391854)
chr6 (147-191)||(17552586-17552630)
[»] chr8 (35 HSPs)
chr8 (145-203)||(39701800-39701858)
chr8 (137-202)||(12189577-12189642)
chr8 (137-202)||(12434005-12434070)
chr8 (147-203)||(9801791-9801847)
chr8 (147-195)||(10129234-10129282)
chr8 (147-203)||(18567415-18567471)
chr8 (147-203)||(26682191-26682247)
chr8 (147-203)||(39024856-39024912)
chr8 (137-191)||(7978013-7978067)
chr8 (147-201)||(8284567-8284621)
chr8 (149-203)||(13327942-13327996)
chr8 (147-204)||(28014857-28014914)
chr8 (142-203)||(35678269-35678330)
chr8 (147-195)||(1203732-1203780)
chr8 (147-203)||(2161510-2161566)
chr8 (147-203)||(3306054-3306110)
chr8 (147-195)||(7140458-7140506)
chr8 (147-203)||(14816125-14816181)
chr8 (147-203)||(14829559-14829615)
chr8 (147-203)||(15198899-15198955)
chr8 (147-191)||(27874680-27874724)
chr8 (148-191)||(13496709-13496752)
chr8 (148-191)||(22838360-22838403)
chr8 (148-191)||(38212944-38212987)
chr8 (149-203)||(4080395-4080449)
chr8 (149-203)||(4084544-4084598)
chr8 (149-203)||(4102851-4102905)
chr8 (147-204)||(14961662-14961719)
chr8 (142-195)||(19343830-19343883)
chr8 (155-204)||(36967077-36967126)
chr8 (148-189)||(40225987-40226028)
chr8 (147-191)||(5573421-5573465)
chr8 (147-191)||(6818152-6818196)
chr8 (147-203)||(26363989-26364045)
chr8 (147-191)||(31812248-31812292)
[»] scaffold0727 (1 HSPs)
scaffold0727 (149-202)||(5815-5868)
[»] scaffold0061 (1 HSPs)
scaffold0061 (147-203)||(52778-52834)
[»] scaffold0017 (1 HSPs)
scaffold0017 (147-203)||(145800-145856)
[»] chr7 (33 HSPs)
chr7 (147-203)||(47457460-47457516)
chr7 (147-202)||(3561877-3561932)
chr7 (149-201)||(5833480-5833532)
chr7 (147-203)||(7170125-7170181)
chr7 (147-203)||(9332084-9332140)
chr7 (147-203)||(19889463-19889519)
chr7 (148-204)||(25709399-25709455)
chr7 (147-202)||(39757109-39757164)
chr7 (142-204)||(4969895-4969957)
chr7 (145-203)||(8091309-8091367)
chr7 (150-204)||(26037215-26037269)
chr7 (147-204)||(33343110-33343167)
chr7 (146-203)||(36548458-36548515)
chr7 (147-191)||(820540-820584)
chr7 (147-203)||(5909281-5909337)
chr7 (137-194)||(7040239-7040298)
chr7 (147-203)||(23982754-23982810)
chr7 (147-203)||(34270384-34270440)
chr7 (147-203)||(46290133-46290189)
chr7 (145-188)||(6587924-6587967)
chr7 (143-202)||(8170645-8170704)
chr7 (148-203)||(22334021-22334076)
chr7 (148-203)||(26300694-26300749)
chr7 (147-198)||(32117942-32117993)
chr7 (136-195)||(42750414-42750473)
chr7 (148-202)||(384431-384484)
chr7 (149-191)||(7899487-7899529)
chr7 (150-191)||(18102232-18102273)
chr7 (150-203)||(41331458-41331511)
chr7 (151-191)||(24462958-24462998)
chr7 (148-204)||(29398134-29398190)
chr7 (147-203)||(33072104-33072160)
chr7 (148-204)||(45501581-45501637)
[»] chr5 (18 HSPs)
chr5 (147-203)||(2795646-2795702)
chr5 (147-202)||(4047536-4047591)
chr5 (142-203)||(11636854-11636915)
chr5 (147-203)||(8103579-8103635)
chr5 (147-202)||(6863680-6863735)
chr5 (51-86)||(9749932-9749967)
chr5 (147-204)||(3398342-3398399)
chr5 (150-203)||(30893752-30893805)
chr5 (149-202)||(34578135-34578188)
chr5 (147-203)||(30839904-30839960)
chr5 (147-191)||(35151354-35151398)
chr5 (147-203)||(36597702-36597758)
chr5 (148-204)||(40980495-40980551)
chr5 (148-203)||(31365950-31366005)
chr5 (149-195)||(41350333-41350379)
chr5 (149-202)||(14466495-14466548)
chr5 (147-204)||(18841704-18841761)
chr5 (6-70)||(4897334-4897398)
[»] chr3 (18 HSPs)
chr3 (147-202)||(3863453-3863508)
chr3 (147-203)||(11611099-11611155)
chr3 (147-202)||(16875024-16875079)
chr3 (148-203)||(20938180-20938235)
chr3 (147-202)||(29686444-29686499)
chr3 (147-193)||(23523079-23523125)
chr3 (147-193)||(38389580-38389626)
chr3 (149-202)||(40497171-40497224)
chr3 (147-204)||(50204525-50204582)
chr3 (147-203)||(2571391-2571447)
chr3 (147-203)||(12515473-12515529)
chr3 (6-74)||(43652749-43652817)
chr3 (152-203)||(11611037-11611088)
chr3 (148-191)||(40930186-40930229)
chr3 (149-191)||(8165781-8165823)
chr3 (148-189)||(33474473-33474514)
chr3 (147-188)||(51618185-51618226)
chr3 (147-191)||(10307901-10307945)
[»] chr2 (28 HSPs)
chr2 (147-202)||(16126558-16126613)
chr2 (150-203)||(19228548-19228601)
chr2 (147-203)||(27665043-27665099)
chr2 (147-192)||(6109523-6109568)
chr2 (147-203)||(4821399-4821455)
chr2 (147-191)||(8065258-8065302)
chr2 (147-195)||(12016797-12016845)
chr2 (147-203)||(24729576-24729632)
chr2 (144-204)||(26003342-26003402)
chr2 (148-203)||(15231954-15232009)
chr2 (148-203)||(16919154-16919209)
chr2 (148-190)||(7720251-7720293)
chr2 (149-195)||(8770887-8770933)
chr2 (150-204)||(15411624-15411678)
chr2 (148-194)||(20566017-20566063)
chr2 (148-189)||(5853463-5853504)
chr2 (147-204)||(9747439-9747496)
chr2 (150-203)||(14377547-14377600)
chr2 (148-189)||(16493532-16493573)
chr2 (147-184)||(25998001-25998038)
chr2 (138-187)||(43388471-43388520)
chr2 (147-204)||(43806482-43806539)
chr2 (147-203)||(5583557-5583613)
chr2 (147-203)||(7757785-7757841)
chr2 (147-195)||(9450388-9450436)
chr2 (163-203)||(13351226-13351266)
chr2 (147-203)||(29157828-29157884)
chr2 (147-191)||(38248419-38248463)
[»] chr1 (33 HSPs)
chr1 (147-202)||(313873-313928)
chr1 (147-202)||(6569984-6570039)
chr1 (137-191)||(6180321-6180375)
chr1 (147-204)||(39310785-39310842)
chr1 (147-203)||(6754594-6754650)
chr1 (144-204)||(13321998-13322058)
chr1 (147-203)||(30172002-30172058)
chr1 (147-203)||(30187543-30187599)
chr1 (147-203)||(39150326-39150382)
chr1 (147-203)||(41624952-41625008)
chr1 (145-195)||(30288861-30288911)
chr1 (161-202)||(8062328-8062369)
chr1 (145-202)||(10896477-10896534)
chr1 (147-184)||(26767470-26767507)
chr1 (147-203)||(1502719-1502775)
chr1 (147-191)||(3168067-3168111)
chr1 (139-191)||(5875206-5875258)
chr1 (137-194)||(6307634-6307693)
chr1 (147-203)||(17919576-17919632)
chr1 (147-203)||(23576413-23576469)
chr1 (147-191)||(34802102-34802146)
chr1 (147-191)||(35512860-35512904)
chr1 (147-203)||(36490902-36490958)
chr1 (147-202)||(44918148-44918203)
chr1 (139-188)||(5879094-5879143)
chr1 (147-192)||(19066632-19066677)
chr1 (147-192)||(19114522-19114567)
chr1 (147-204)||(22167457-22167514)
chr1 (165-202)||(44007547-44007584)
chr1 (147-187)||(25465297-25465337)
chr1 (147-203)||(30362994-30363050)
chr1 (147-187)||(38812879-38812919)
chr1 (147-191)||(51382449-51382493)
[»] scaffold0011 (1 HSPs)
scaffold0011 (145-202)||(13209-13266)
[»] scaffold0128 (1 HSPs)
scaffold0128 (147-203)||(44293-44349)
[»] scaffold0111 (1 HSPs)
scaffold0111 (147-193)||(37113-37159)
[»] scaffold0073 (1 HSPs)
scaffold0073 (137-194)||(16522-16581)
[»] scaffold0155 (1 HSPs)
scaffold0155 (147-195)||(3412-3460)
[»] scaffold0036 (1 HSPs)
scaffold0036 (148-188)||(94018-94058)
[»] scaffold0018 (1 HSPs)
scaffold0018 (147-195)||(182173-182221)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 25843614 - 25843416
Alignment:
Q  6 acttcataggagaggtaagtttgataggtagaaacaaatgaataatccttgtgtttcatattgaaagattgaat-aaaagataatgaaattttggtctaa 104  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25843614 acttcataggagaggtaagcttgataggtagaaacaaaggaataatccttatgtttcatattgaaagattgaataaaaagataatgaaattttggtctaa 25843515  T
Q  105 ctaacttccttaccttctaaccaacttttttaatttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  25843514 ctaacttccttaccttctaaccaacttttctaaactaatt-aggtttttctatcacgtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgt 25843416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 4329773 - 4329717
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  4329773 ggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttg 4329717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 25843424 - 25843380
Alignment:
Q  220 taactttgtcttagaacttttgtgcattttatattaaatatataa 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25843424 taactttgtcttagaacttttgtgcattttatattaaatatataa 25843380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 23553747 - 23553694
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  23553747 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaacttt 23553694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 35999946 - 36000001
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  35999946 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 36000001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 29190813 - 29190871
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||| ||| |||||||    
T  29190813 aaggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttg 29190871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 27019439 - 27019382
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| ||| || |||||    
T  27019439 ggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgt 27019382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 47326892 - 47326947
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||| | |||||||    
T  47326892 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttg 47326947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 47341688 - 47341743
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||| | |||||||    
T  47341688 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttg 47341743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 54495636 - 54495691
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||| | ||||||    
T  54495636 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaacttt 54495691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 27362570 - 27362524
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagt 193  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  27362570 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 27362524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 17410003 - 17409946
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||| ||| ||||||||    
T  17410003 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgt 17409946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 18882266 - 18882323
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  18882266 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 18882323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 48910803 - 48910856
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    |||||||||||  |||||||||||| ||||||| ||||||||||||| ||||||    
T  48910803 tttttctatcatatgcaaatttgcatatgttaagaagtttaaagtagtaacttt 48910856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 10813493 - 10813549
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||| ||||||| ||| ||| ||||||||||||| |||||||    
T  10813493 ggtttttctatcatgtgcagatttgcatatgataataagtttaaagtagtaactttg 10813549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 23051381 - 23051437
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| || |||||||||| |||||||    
T  23051381 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 23051437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 33632202 - 33632246
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||    
T  33632202 ggtttttctatcatgtgcgaatttgcacatgttaaaaagtttaaa 33632246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 41415556 - 41415612
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||| ||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  41415556 ggtttttatatcatgtgcaaatttgcacatgataataagtttaaagtagtaactttg 41415612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 49228833 - 49228777
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| |||||||||||||  |||||| ||||||||| ||| |||||||    
T  49228833 ggtttttctatcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactttg 49228777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 3085859 - 3085800
Alignment:
Q  137 atttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagc 196  Q
    ||||| ||| ||||||||||||| ||||||||||||| || |||| ||||||||| ||||    
T  3085859 atttagttagggtttttctatcatgtgcaaatttgcacattttaagaagtttaaaatagc 3085800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 23545654 - 23545611
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaataagtttaaa 23545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 46803977 - 46803934
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||||||||| || ||||||||||||||    
T  46803977 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaa 46803934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 16667385 - 16667427
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 16667427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 18812575 - 18812637
Alignment:
Q  8 ttcataggagaggtaagtttgataggtagaaacaaatgaataatccttgtgtttcatattgaa 70  Q
    ||||||||||| ||| |  ||| ||||||||||||| |||||||||||||  |||||||||||    
T  18812575 ttcataggagaagtaggcatgagaggtagaaacaaaagaataatccttgtaattcatattgaa 18812637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 4779436 - 4779477
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagttta 189  Q
    |||||||||||| ||||||||||||| ||||||| |||||||    
T  4779436 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 19450899 - 19450956
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||| | ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  19450899 ggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 19450956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 19468373 - 19468316
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||| | ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  19468373 ggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 19468316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 44916642 - 44916699
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| || ||||||| |||||| ||| || |||||    
T  44916642 ggtttttctatcatgtgcaaatttgcacatattaaaaaatttaaaatagaaattttgt 44916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 49250336 - 49250385
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaa 198  Q
    |||||||| || ||||||||||||| ||||||| || |||||||||||||    
T  49250336 tttttctaacatgtgcaaatttgcatatgttaagaaatttaaagtagcaa 49250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 7349867 - 7349811
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||| ||||||| | ||| ||| ||||||||||||| |||||||    
T  7349867 ggtttttctatcatgtgtaaatttgtacatgataagaagtttaaagtagtaactttg 7349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 9759141 - 9759197
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| || |||||||||| ||||||| || |||||| ||| |||||||    
T  9759141 ggtttttctatcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttg 9759197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 24685012 - 24684972
Alignment:
Q  151 tttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||| ||||||||||||| ||||||| |||||||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaa 24684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 39877009 - 39876953
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||| ||||||||| ||||||| || |||||| ||| |||||||    
T  39877009 ggtttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttg 39876953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 31568289 - 31568232
Alignment:
Q  146 aggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  31568289 aggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttg 31568232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 6017033 - 6016979
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||    
T  6017033 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttg 6016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 3261262 - 3261201
Alignment:
Q  142 attaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||| ||||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||    
T  3261262 attagggtttttctatcatgtgcaaatttacacatgttaaaaagtttaaaatagaaactttg 3261201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 3853122 - 3853066
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||||||| |||||||    
T  3853122 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttg 3853066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 32614939 - 32614990
Alignment:
Q  143 ttaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagta 194  Q
    ||||||||||||||||| || |||||||||| ||||||| ||||||||||||    
T  32614939 ttaaggtttttctatcatgtacaaatttgcacatgttaagaagtttaaagta 32614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 29065422 - 29065468
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  29065422 aaggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29065468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 29120275 - 29120321
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  29120275 aaggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29120321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 10887207 - 10887162
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagt 193  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 10887162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 29863300 - 29863345
Alignment:
Q  146 aggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  29863300 aggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 29863345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 34692533 - 34692476
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  34692533 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 34692476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 14228125 - 14228181
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  14228125 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 14228181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 17596520 - 17596464
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||| | ||| ||| ||||||||||||| |||||||    
T  17596520 ggtttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttg 17596464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 28943768 - 28943824
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  28943768 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 28943824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 31169762 - 31169818
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||| ||||||||| ||||||| || |||||||||| |||||||    
T  31169762 ggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttg 31169818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 33017903 - 33017847
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| | ||||||||||||| |||||||||| |||||| ||| |||||||    
T  33017903 ggtttttctattatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttg 33017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 29074438 - 29074481
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||    
T  29074438 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 29079202 - 29079245
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||    
T  29079202 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29079245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 29107011 - 29107054
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||    
T  29107011 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29107054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 18332687 - 18332733
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagt 193  Q
    ||||||||||||| |||||||||| || ||||||| |||||||||||    
T  18332687 ggtttttctatcatgtgcaaattttcacatgttaagaagtttaaagt 18332733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 31069583 - 31069637
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| |||||||||| || ||||||| ||||||||| ||| |||||||    
T  31069583 tttttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactttg 31069637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 2830680 - 2830724
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| || |||||||||| ||||||| |||||||||    
T  2830680 ggtttttctatcatgtacaaatttgcacatgttaagaagtttaaa 2830724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 13391854 - 13391810
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||    
T  13391854 ggtttttctatcatgtgcaaatttgcgcatgttaagaagtttaaa 13391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 17552586 - 17552630
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| || ||||||    
T  17552586 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 17552630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 39701800 - 39701858
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||    
T  39701800 aaggtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttg 39701858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 12189577 - 12189642
Alignment:
Q  137 atttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| ||| ||||||    
T  12189577 atttaattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaacttt 12189642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 12434005 - 12434070
Alignment:
Q  137 atttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| ||| ||||||    
T  12434005 atttaattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaacttt 12434070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 9801847 - 9801791
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||| |||| ||||||||||||| ||||||| ||||||||||||| |||||||    
T  9801847 ggtttttcaatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttg 9801791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 10129282 - 10129234
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  10129282 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtag 10129234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 18567415 - 18567471
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| |||||||    
T  18567415 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttg 18567471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 26682247 - 26682191
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||||||| |||||||    
T  26682247 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttg 26682191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 39024856 - 39024912
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  39024856 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 39024912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 7978067 - 7978013
Alignment:
Q  137 atttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||| ||| |||||||||||||  |||||||||||| |||||||||||||||||    
T  7978067 atttatttagggtttttctatcatatgcaaatttgcaaatgttaaaaagtttaaa 7978013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 8284567 - 8284621
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactt 201  Q
    ||||||||||||| ||||||||||| | ||||||| ||||||||| |||||||||    
T  8284567 ggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagcaactt 8284621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 13327942 - 13327996
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||| ||| |||||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttg 13327996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 28014857 - 28014914
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  28014857 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 28014914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 35678269 - 35678330
Alignment:
Q  142 attaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||| ||||||| ||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  35678269 attagggtttttttatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 35678330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 1203780 - 1203732
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||| ||||||||||||| ||| ||| |||||||||||||    
T  1203780 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtag 1203732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 2161566 - 2161510
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  2161566 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 2161510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 3306054 - 3306110
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  3306054 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 3306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 7140458 - 7140506
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||| ||||||||||||| || |||| |||||||||||||    
T  7140458 ggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtag 7140506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 14816125 - 14816181
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| || |||||||||| |||||||    
T  14816125 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 14816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 14829615 - 14829559
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| || |||||||||| |||||||    
T  14829615 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 14829559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 15198899 - 15198955
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| |||||||||| ||| || ||| |||||||    
T  15198899 ggtttttctatcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttg 15198955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 27874680 - 27874724
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  27874680 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 27874724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 13496709 - 13496752
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 13496752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 22838403 - 22838360
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  22838403 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 22838360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 38212944 - 38212987
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 38212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 4080395 - 4080449
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| ||||||||||||| ||| ||| || |||||||||| |||||||    
T  4080395 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 4080449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 4084544 - 4084598
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| ||||||||||||| ||| ||| || |||||||||| |||||||    
T  4084544 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 4084598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 4102851 - 4102905
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| ||||||||||||| ||| ||| || |||||||||| |||||||    
T  4102851 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 4102905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 14961662 - 14961719
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||| ||| || |||||    
T  14961662 ggtttttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgt 14961719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 19343830 - 19343883
Alignment:
Q  142 attaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    |||| ||||||| ||||| ||||||||||||| ||||||| | |||||||||||    
T  19343830 attagggtttttttatcatgtgcaaatttgcacatgttaacacgtttaaagtag 19343883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 36967077 - 36967126
Alignment:
Q  155 tatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||| ||||||||    
T  36967077 tatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgt 36967126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 40225987 - 40226028
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagttta 189  Q
    |||||||||||| ||||||||||||| ||||||| |||||||    
T  40225987 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 5573465 - 5573421
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||| | ||||||| |||||||||    
T  5573465 ggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 5573421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 6818196 - 6818152
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||| | ||||||| |||||||||    
T  6818196 ggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 6818152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 26363989 - 26364045
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||  ||||||| || |||||| ||| |||||||    
T  26363989 ggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttg 26364045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 31812292 - 31812248
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| || |||| |||||||||    
T  31812292 ggtttttctatcatgtgcaaatttgcacatattaagaagtttaaa 31812248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 5868 - 5815
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  5868 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaacttt 5815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 52778 - 52834
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||    
T  52778 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttg 52834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 145856 - 145800
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||    
T  145856 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttg 145800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 47457460 - 47457516
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||    
T  47457460 ggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttg 47457516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 3561877 - 3561932
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  3561877 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 3561932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 5833532 - 5833480
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactt 201  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| || |||||    
T  5833532 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaactt 5833480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 7170181 - 7170125
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  7170181 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 7170125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 9332140 - 9332084
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| |||||||    
T  9332140 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttg 9332084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 19889519 - 19889463
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  19889519 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 19889463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 25709399 - 25709455
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||| ||| ||||||||    
T  25709399 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgt 25709455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 39757109 - 39757164
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| ||||||    
T  39757109 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaacttt 39757164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 4969957 - 4969895
Alignment:
Q  142 attaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||| ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  4969957 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 4969895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 8091309 - 8091367
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||||| |||||||||| || ||||||| ||||||||| ||| |||||||    
T  8091309 aaggtttttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttg 8091367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 26037269 - 26037215
Alignment:
Q  150 ttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||| || |||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgt 26037215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 33343167 - 33343110
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| ||||||||    
T  33343167 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgt 33343110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 36548458 - 36548515
Alignment:
Q  146 aggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||| ||||| ||||||||||||| ||||||| ||||||||| ||| |||||||    
T  36548458 aggtttttttatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttg 36548515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 820540 - 820584
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  820540 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 5909281 - 5909337
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||| ||||||||| ||| ||| ||||||||||||| |||||||    
T  5909281 ggtttttctatcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttg 5909337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 7040239 - 7040298
Alignment:
Q  137 atttaattaa--ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagta 194  Q
    ||||||||||  ||||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  7040239 atttaattaaagggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagta 7040298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 23982754 - 23982810
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| | ||||| || |||||||||| |||||||    
T  23982754 ggtttttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttg 23982810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 34270440 - 34270384
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  34270440 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 34270384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 46290189 - 46290133
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  46290189 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 46290133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 6587967 - 6587924
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagttt 188  Q
    ||||||||||||||| ||||||||||||| || |||||||||||    
T  6587967 aaggtttttctatcatgtgcaaatttgcacatattaaaaagttt 6587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 8170704 - 8170645
Alignment:
Q  143 ttaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    |||||| |||| ||||| || ||||||| || ||||||||||||||||||||| ||||||    
T  8170704 ttaagggttttttatcatgtacaaatttacacatgttaaaaagtttaaagtagtaacttt 8170645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 22334021 - 22334076
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||| |||| ||||||||||| | ||||||| ||||||||||||| |||||||    
T  22334021 gtttttcaatcatgtgcaaatttgtacatgttaagaagtttaaagtagtaactttg 22334076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 26300749 - 26300694
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||| |||| || |||||||||| ||||||||||||||||| ||| |||||||    
T  26300749 gtttttccatcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttg 26300694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 32117993 - 32117942
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaa 198  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||||| ||||    
T  32117993 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtggcaa 32117942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 42750473 - 42750414
Alignment:
Q  136 aatttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    |||||| ||| || ||||||||||  |||||||||||| ||||||| |||||||||||||    
T  42750473 aatttacttaggggttttctatcatatgcaaatttgcatatgttaagaagtttaaagtag 42750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 384431 - 384484
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||  |||||||||||| ||||||| ||||||||||||| ||||||    
T  384431 gtttttctatcat-tgcaaatttgcacatgttaagaagtttaaagtagtaacttt 384484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 7899487 - 7899529
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaa 7899529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 18102232 - 18102273
Alignment:
Q  150 ttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||| ||||||||||||| ||||||| |||||||||    
T  18102232 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18102273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 41331458 - 41331511
Alignment:
Q  150 ttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||| ||||||||||||| ||| ||| || |||||||||| |||||||    
T  41331458 ttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 41331511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 24462958 - 24462998
Alignment:
Q  151 tttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||| ||||||||||||| ||||||| |||||||||    
T  24462958 tttctatcatgtgcaaatttgcacatgttaagaagtttaaa 24462998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 29398134 - 29398190
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||||||||||| || |||||||||| ||||||| ||||||||| ||| || |||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgt 29398190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 33072160 - 33072104
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||| | ||||||| || |||||| ||| |||||||    
T  33072160 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttg 33072104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 45501637 - 45501581
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||||||||||| ||||||||||||| || |||| ||||||||| ||| || |||||    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgt 45501581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 2795702 - 2795646
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||    
T  2795702 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttg 2795646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 4047591 - 4047536
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  4047591 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 4047536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 11636915 - 11636854
Alignment:
Q  142 attaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||| ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  11636915 attagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 11636854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 8103579 - 8103635
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  8103579 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 8103635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 6863735 - 6863680
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||| ||| ||||||    
T  6863735 ggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaacttt 6863680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 9749967 - 9749932
Alignment:
Q  51 tccttgtgtttcatattgaaagattgaataaaagat 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  9749967 tccttgtgtttcatattgaaagattgaataaaagat 9749932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 3398399 - 3398342
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  3398399 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 3398342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 30893805 - 30893752
Alignment:
Q  150 ttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||| ||||||||||||| ||||||| ||||||||| ||| |||||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttg 30893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 34578188 - 34578135
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| ||| ||||||    
T  34578188 tttttttatcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaacttt 34578135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 30839960 - 30839904
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  30839960 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 30839904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 35151398 - 35151354
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||    
T  35151398 ggtttttcaatcatgtgcaaatttgcatatgttaaaaagtttaaa 35151354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 36597758 - 36597702
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  36597758 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 36597702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 40980551 - 40980495
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||||||||||| ||||||||||||| || |||||||||||||| ||| || |||||    
T  40980551 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaatagaaattttgt 40980495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 31365950 - 31366005
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||||| ||||||||||| | ||||||| ||||||||| ||| |||||||    
T  31365950 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttg 31366005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 41350379 - 41350333
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtag 41350333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 14466495 - 14466548
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||| ||||||||||  | ||||||| ||||||||||||| ||||||    
T  14466495 tttttctatcatgtgcaaatttagacatgttaagaagtttaaagtagtaacttt 14466548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 18841704 - 18841761
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||| ||||  ||||||||||||| ||||||||||||||||| ||| || |||||    
T  18841704 ggtttttttatcgtgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgt 18841761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 4897334 - 4897398
Alignment:
Q  6 acttcataggagaggtaagtttgataggtagaaacaaatgaataatccttgtgtttcatattgaa 70  Q
    ||||||||||||| ||| |  | | ||||||||||||| |||||||||||||  |||||||||||    
T  4897334 acttcataggagaagtaggcattagaggtagaaacaaaggaataatccttgtaattcatattgaa 4897398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 3863508 - 3863453
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  3863508 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 3863453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 11611155 - 11611099
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  11611155 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 11611099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 16875024 - 16875079
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||  ||||||||||||| ||||||| ||||||||||||| ||||||    
T  16875024 ggtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 16875079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 20938235 - 20938180
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  20938235 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 20938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 29686499 - 29686444
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| ||||||    
T  29686499 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaacttt 29686444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 23523125 - 23523079
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagt 193  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  23523125 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 23523079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 38389626 - 38389580
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagt 193  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  38389626 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 38389580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 40497224 - 40497171
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||| ||||||||||||| ||| ||| ||||||||||||| ||||||    
T  40497224 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaacttt 40497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 50204582 - 50204525
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  50204582 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 50204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 2571447 - 2571391
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  2571447 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 2571391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 12515473 - 12515529
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||| ||||||||| |||||||||| |||||| ||| |||||||    
T  12515473 ggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactttg 12515529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 43652817 - 43652749
Alignment:
Q  6 acttcataggagaggtaagtttgataggtagaaacaaatgaataatccttgtgtttcatattgaaagat 74  Q
    ||||||||||| ||||| ||||||||||| || ||||| ||| | ||||  ||||||||||||||||||    
T  43652817 acttcataggaaaggtaggtttgataggttgatacaaaggaaaactcctaatgtttcatattgaaagat 43652749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 11611088 - 11611037
Alignment:
Q  152 ttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  11611088 ttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 11611037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 40930229 - 40930186
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  40930229 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 40930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 8165823 - 8165781
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  8165823 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 8165781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 33474473 - 33474514
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagttta 189  Q
    |||||||||||| ||||||||||||| ||||||| |||||||    
T  33474473 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 51618226 - 51618185
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagttt 188  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||    
T  51618226 ggtttttctatcatgtgcaaatttgcacatgttaagaagttt 51618185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 10307945 - 10307901
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| || ||||||    
T  10307945 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 10307901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 16126558 - 16126613
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  16126558 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 16126613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 19228601 - 19228548
Alignment:
Q  150 ttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttg 19228548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 27665043 - 27665099
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  27665043 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 27665099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 6109568 - 6109523
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaag 192  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  6109568 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaag 6109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 4821455 - 4821399
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| | ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  4821455 ggtttttctattatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 4821399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 8065302 - 8065258
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  8065302 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 8065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 12016845 - 12016797
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||| ||||||||||||| || |||| |||||||||||||    
T  12016845 ggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtag 12016797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 24729576 - 24729632
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  24729576 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 24729632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 26003342 - 26003402
Alignment:
Q  144 taaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  26003342 taagggttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgt 26003402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 15232009 - 15231954
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||| | ||||||||||||| ||||||| ||||||||||| | |||||||    
T  15232009 gtttttctattatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttg 15231954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 16919154 - 16919209
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||| ||||||| ||||||||||||| || |||| ||||||||||||| |||||||    
T  16919154 gtttatctatcatgtgcaaatttgcacatattaacaagtttaaagtagtaactttg 16919209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 7720293 - 7720251
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaa 190  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  7720293 gtttttctatcatgtgcaaatttgcacgtgttaaaaagtttaa 7720251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 8770887 - 8770933
Alignment:
Q  149 tttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  8770887 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtag 8770933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 15411624 - 15411678
Alignment:
Q  150 ttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||| || ||||||||||||| ||||||| ||||||||| ||| ||||||||    
T  15411624 ttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgt 15411678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 20566017 - 20566063
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagta 194  Q
    |||||||||||| |||||||||| || ||||||| ||||||||||||    
T  20566017 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaagta 20566063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 5853463 - 5853504
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagttta 189  Q
    |||||||||||| ||||||||||||| ||||||| |||||||    
T  5853463 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 5853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 9747496 - 9747439
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| |||||||||| || ||||||| ||||||||| ||| || |||||    
T  9747496 ggtttttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgt 9747439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 14377600 - 14377547
Alignment:
Q  150 ttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    |||||||||| ||||||||||| | ||| ||| ||||||||||||| |||||||    
T  14377600 ttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttg 14377547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 16493532 - 16493573
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagttta 189  Q
    |||||||||||| ||||||||||||| ||||||| |||||||    
T  16493532 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 16493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 25998001 - 25998038
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaa 184  Q
    |||||||||||||||||||||||||||  |||||||||    
T  25998001 ggtttttctatcacgtgcaaatttgcatgtgttaaaaa 25998038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 43388471 - 43388520
Alignment:
Q  138 tttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtt 187  Q
    |||||| | ||||||||||||| ||||||||||||| ||||||| |||||    
T  43388471 tttaataagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 43388520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 43806539 - 43806482
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||  ||| ||||||||| ||||||||||||||||| ||| || |||||    
T  43806539 ggtttttctatcgtgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgt 43806482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 5583557 - 5583613
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| | ||||||||||| ||||||| || |||||| ||| |||||||    
T  5583557 ggtttttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttg 5583613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 7757785 - 7757841
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| |||||||||| || ||||||| || |||||| ||| |||||||    
T  7757785 ggtttttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttg 7757841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 9450436 - 9450388
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||| |||||||| |||| ||||||| || ||||||||||    
T  9450436 ggtttttctatcatgtgcaaatctgcacatgttaagaaatttaaagtag 9450388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 13351226 - 13351266
Alignment:
Q  163 gcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||| ||||||| ||||||||||||| |||||||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactttg 13351266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 29157828 - 29157884
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || ||| || ||| |||||||    
T  29157828 ggtttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttg 29157884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 38248419 - 38248463
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| || ||||||    
T  38248419 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 38248463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 313928 - 313873
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  313928 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 313873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 6569984 - 6570039
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||    
T  6569984 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 6570039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 6180375 - 6180321
Alignment:
Q  137 atttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  6180375 atttaattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6180321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 39310785 - 39310842
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| ||| || |||||    
T  39310785 ggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaaatagaaattttgt 39310842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 6754650 - 6754594
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  6754650 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 6754594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 13322058 - 13321998
Alignment:
Q  144 taaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||||| ||| || |||||    
T  13322058 taaggtttttctatcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgt 13321998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 30172058 - 30172002
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||| | |||||||    
T  30172058 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttg 30172002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 30187599 - 30187543
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||| | |||||||    
T  30187599 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttg 30187543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 39150326 - 39150382
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  39150326 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 39150382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 41625008 - 41624952
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||||    
T  41625008 ggtttttctatcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttg 41624952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 30288861 - 30288911
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||||| |||||||||| || ||||||| |||||||||||||    
T  30288861 aaggtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtag 30288911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 8062369 - 8062328
Alignment:
Q  161 gtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  8062369 gtgcaaatttgcacatgttaaaaagtttaaagtagtaacttt 8062328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 10896534 - 10896477
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||||| ||| ||| ||||| ||||||| ||||||||||||| ||||||    
T  10896534 aaggtttttctatcatgtgtaaaattgcacatgttaagaagtttaaagtagtaacttt 10896477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 26767470 - 26767507
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaa 184  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  26767470 ggtttttctatcacgtgcaaatttgcaaatgttaaaaa 26767507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 1502719 - 1502775
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  1502719 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 1502775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 3168067 - 3168111
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||    
T  3168067 ggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaaa 3168111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 5875206 - 5875258
Alignment:
Q  139 ttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||    
T  5875206 ttaattaggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 5875258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 6307693 - 6307634
Alignment:
Q  137 atttaattaa--ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagta 194  Q
    ||||||||||  ||||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  6307693 atttaattaaagggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagta 6307634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 17919632 - 17919576
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||  ||| ||||||||||||| |||||||    
T  17919632 ggtttttctatcatgtgcaaatttgcacataataagaagtttaaagtagtaactttg 17919576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 23576413 - 23576469
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||| ||| |||||||    
T  23576413 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttg 23576469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 34802146 - 34802102
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  34802146 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 34802102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 35512904 - 35512860
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  35512904 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 35512860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 36490958 - 36490902
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| | ||||||||||| ||||||| ||||||||| ||| |||||||    
T  36490958 ggtttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttg 36490902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 44918203 - 44918148
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||| |||||||||| || ||||||| || |||||||||| ||||||    
T  44918203 ggtttttctatcatgtgcaaatttacacatgttaagaaatttaaagtagtaacttt 44918148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 5879094 - 5879143
Alignment:
Q  139 ttaattaaggtttttctatcacgtgcaaatttgcagatgttaaaaagttt 188  Q
    ||||||| ||||||||||||| ||| ||||||||| ||||||| ||||||    
T  5879094 ttaattacggtttttctatcatgtgtaaatttgcacatgttaagaagttt 5879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 19066677 - 19066632
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaag 192  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||    
T  19066677 ggtttttctatcatgtataaatttgcacatgttaaaaagtttaaag 19066632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 19114567 - 19114522
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaag 192  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||    
T  19114567 ggtttttctatcatgtataaatttgcacatgttaaaaagtttaaag 19114522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 22167514 - 22167457
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttgt 204  Q
    |||||| |||||| ||||||||||||| ||| ||| ||||||||| ||| ||||||||    
T  22167514 ggttttcctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgt 22167457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 44007547 - 44007584
Alignment:
Q  165 aaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  44007547 aaatttgcacatgttaagaagtttaaagtagcaacttt 44007584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 25465337 - 25465297
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtt 187  Q
    ||||||||||||| ||||||||||||| ||||||| |||||    
T  25465337 ggtttttctatcatgtgcaaatttgcacatgttaagaagtt 25465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 30362994 - 30363050
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| ||| ||| || |||||| ||| |||||||    
T  30362994 ggtttttctatcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttg 30363050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 38812919 - 38812879
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtt 187  Q
    ||||||||||||| ||||||||||||| ||||||| |||||    
T  38812919 ggtttttctatcatgtgcaaatttgcacatgttaagaagtt 38812879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 51382493 - 51382449
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaa 191  Q
    ||||||||||||| |||||| |||||| ||||||| |||||||||    
T  51382493 ggtttttctatcatgtgcaactttgcacatgttaagaagtttaaa 51382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 13266 - 13209
Alignment:
Q  145 aaggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaacttt 202  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||| ||| ||||||    
T  13266 aaggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaacttt 13209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 44293 - 44349
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtagcaactttg 203  Q
    ||||||||||||| ||||||||||||| || |||||||||||||| || ||||||||    
T  44293 ggtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaataacaactttg 44349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 37113 - 37159
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagt 193  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  37113 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 37159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 16522 - 16581
Alignment:
Q  137 atttaattaa--ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagta 194  Q
    ||||||||||  ||||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  16522 atttaattaaagggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagta 16581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 3412 - 3460
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||| ||| ||||||||| || |||| |||||||||||||    
T  3412 ggtttttctatcatgtgtaaatttgcacatattaagaagtttaaagtag 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 94018 - 94058
Alignment:
Q  148 gtttttctatcacgtgcaaatttgcagatgttaaaaagttt 188  Q
    |||||||||||| ||||||||||||| ||||||| ||||||    
T  94018 gtttttctatcatgtgcaaatttgcatatgttaagaagttt 94058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 182221 - 182173
Alignment:
Q  147 ggtttttctatcacgtgcaaatttgcagatgttaaaaagtttaaagtag 195  Q
    ||||||||||||| ||| ||||||| | ||||||| |||||||||||||    
T  182221 ggtttttctatcatgtgtaaatttgtacatgttaagaagtttaaagtag 182173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University