View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6946_low_19 (Length: 220)
Name: NF6946_low_19
Description: NF6946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6946_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 31905142 - 31904955
Alignment:
| Q |
12 |
cgaagaatatcaataatatgagactcaaaaagaagagaagattcagtgtagatgagatgaaaagctgtagtgggtctccaaccagcaatccaatgaagag |
111 |
Q |
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| T |
31905142 |
cgaagaatatcaataatatgagactcaaaaagaagagaagattcagtgtagatgagatgaaaagctgtagtgggtctccaaccagcaatccaatgaagag |
31905043 |
T |
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| Q |
112 |
aacgttcaagtgttgtagcccaaggagatgctaaaacatgcagtggatctttttcagcagccattgattttgcattgtagtaatcttg |
199 |
Q |
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| T |
31905042 |
aacgttcaagtgttgtagcccaaggagatgctaagacatgcagtggatctttttcagcagccattgattttgcattgtagtaatcttg |
31904955 |
T |
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