View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6947_low_3 (Length: 229)
Name: NF6947_low_3
Description: NF6947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6947_low_3 |
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Alignment Details
Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 7297058 - 7296921
Alignment:
| Q |
7 |
acaatatgccaaggtggtaaaaagaattgcaagcacttgaaacgattgcgagaactctagccacaagaatgacattaaagtggaaatggaatggtaaaag |
106 |
Q |
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| T |
7297058 |
acaatatgccaaggtggtaaaaagaattgcaagcacttgaaacgattgcgagaattctagccacaagaatgacattaaagtggaaatggaatggtaaaag |
7296959 |
T |
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| Q |
107 |
agttgtaagaaaaccaatttacgacgtcttagaatggc |
144 |
Q |
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| T |
7296958 |
agttgtaagaaaaccaatttacgacgtcttagaatggc |
7296921 |
T |
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