View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6948_high_2 (Length: 534)

Name: NF6948_high_2
Description: NF6948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6948_high_2
NF6948_high_2
[»] chr6 (21 HSPs)
chr6 (19-519)||(14015474-14015976)
chr6 (90-480)||(13892316-13892706)
chr6 (90-480)||(14025644-14026034)
chr6 (109-481)||(14110838-14111210)
chr6 (88-518)||(13932673-13933103)
chr6 (89-519)||(13874611-13875041)
chr6 (88-515)||(13472307-13472734)
chr6 (88-528)||(13862140-13862580)
chr6 (90-519)||(14047654-14048083)
chr6 (86-520)||(14084990-14085424)
chr6 (164-350)||(13928832-13929018)
chr6 (382-479)||(13912187-13912284)
chr6 (19-82)||(13892173-13892236)
chr6 (19-82)||(14048163-14048226)
chr6 (19-82)||(13933181-13933244)
chr6 (19-92)||(14085490-14085563)
chr6 (21-82)||(14026114-14026175)
chr6 (22-83)||(14111308-14111369)
chr6 (35-83)||(13874485-13874533)
chr6 (34-82)||(13472181-13472229)
chr6 (35-82)||(13862015-13862062)


Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 519
Target Start/End: Complemental strand, 14015976 - 14015474
Alignment:
Q  19 aatggcacactatccaatctctcaatattctcatctttggaaatatttgatatttctgaaaataaagtaaatggtgtgatctcagacttccattttgctg 118  Q
    |||||||||||| |  |||||||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  14015976 aatggcacactacctgatctctcaatattctcatttttggaaatatttcatatttctgaaaataaaattaatggtgtgatttcagacttccattttgctg 14015877  T
Q  119 gtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatggatgccaccttttcaactccacactataagatt 218  Q
    |||||||||||||||||||||||  |||||| |||||||||||| |||||| ||||||  |||| ||| | |||||||||||||| |    |||| ||||    
T  14015876 gtatgtcaatgttaaaggaattagacttgtcagacaattcactagcattgacatttactgaaaattgggtcccaccttttcaactgcgtggtataggatt 14015777  T
Q  219 aagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcgatatttccaatgttggaatttctggtaatgtt 318  Q
     ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |  ||  ||| |||||||| |||| ||||||||| | |||| ||    
T  14015776 gagatcatgcaaacttggtcttacatttcctaaatggattcagacacaaaaacacattcacaatcttgatatttcgaatgctggaatttcagataatatt 14015677  T
Q  319 ccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctcaaaggatctattccgaatcttcaagtgaaaa 418  Q
    || ||||||||||||| ||| |||||||||||  |||| |   | ||||||||||| || || ||||||||||| || ||||| ||||||||||| ||||    
T  14015676 ccagagtggttttgggctaaactatcatcacaagagtgctaccgcatcaacatttcaaacaataatctcaaaggttcaattccaaatcttcaagtcaaaa 14015577  T
Q  419 --attattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctacggggttctggattcattgatctatccaaaaataaa 516  Q
      | | || || | || |||||||||||||||||||||||||||||| ||||||| |||||||||  ||||||| | | |||||| | |||||||| |||    
T  14015576 ttaattttttttttttatatctctttcatcaaatgaatttgaagggcctattccagcatttctacaaggttctgaacttattgatttgtccaaaaacaaa 14015477  T
Q  517 ttc 519  Q
    |||    
T  14015476 ttc 14015474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 90 - 480
Target Start/End: Original strand, 13892316 - 13892706
Alignment:
Q  90 tggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatggatg 189  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||   |||||||||| || |||||||| ||||||| ||| |     
T  13892316 tggtgtgatctctgacttccatttttctggtatgtcaatgttagaggaattatccttgtcaagcaattcactagcaatgagatttccccaaaattgggtc 13892415  T
Q  190 ccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcgata 289  Q
    || ||||||||| |  |||||||| |||| ||||| ||||| ||||||  |||||||||||| ||||||||||| ||||||||| |  |   ||| ||||    
T  13892416 cctccttttcaattggacactataggattgagatcctgcaaacttggtcctacatttcctaactggattcagacacaaaaacacattcaaaatcttgata 13892515  T
Q  290 tttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctcaa 389  Q
    |||| |||| ||||||||| | ||||||||| ||||||||||||| |||  |||||| | |  ||||  | || ||||||||||| || || ||||||||    
T  13892516 tttctaatgctggaatttcagataatgttccagagtggttttgggctaaattatcattaaaagagtgcagaagcatcaacatttcaaacaataatctcaa 13892615  T
Q  390 aggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttcta 480  Q
    |||||  ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  13892616 aggattaattccaaatcttcaagtcaaaaattattgttctattttatctctttcatcaaatgaatttgaagggcctattccaccatttcta 13892706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 90 - 480
Target Start/End: Complemental strand, 14026034 - 14025644
Alignment:
Q  90 tggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatggatg 189  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |||||| ||||||  |||| ||| |     
T  14026034 tggtgtgatctcagaatttcatttttctggtatgtcaatgttaaaggaattagacttgtctgacaattcacttgcattgacatttactgaaaattgggtc 14025935  T
Q  190 ccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcgata 289  Q
    ||||||||||||||  ||| |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||  || || |   ||| ||||    
T  14025934 ccaccttttcaactgtacaatataggattgagatcatgcaaacttggtcttacatttcctaaatggattcagacacaaaagtacctgcaggatcttgata 14025835  T
Q  290 tttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctcaa 389  Q
    |||| || | ||||||||| | ||||||||| ||||||||||||| ||| |||||||||||   |||    |  ||||||||||| || || ||||||||    
T  14025834 tttcgaaggctggaatttcagataatgttccagagtggttttgggctaaactatcatcacaatggtgcaacaacatcaacatttcaaacaataatctcaa 14025735  T
Q  390 aggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttcta 480  Q
    |||||  ||||| ||||||||||| ||||||  ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  14025734 aggattaattccaaatcttcaagtcaaaaatcgttgttctgttttatctctttcatcaaatgaatttgaagggcctattccaccatttcta 14025644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 109 - 481
Target Start/End: Complemental strand, 14111210 - 14110838
Alignment:
Q  109 cattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatggatgccaccttttcaactccaca 208  Q
    |||||| |||||||||| |||||||||||||||  ||||||||||||||||||| |||||| ||||||  |||| ||| | || || |||||||| ||||    
T  14111210 catttttctggtatgtcgatgttaaaggaattagacttgtctgacaattcactagcattgacatttactgaaaactgggtcccgccatttcaacttcaca 14111111  T
Q  209 ctataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcgatatttccaatgttggaatttc 308  Q
     |||| |||| ||||||||||| |||||| ||||||||||||||||||||||||| || ||  || ||  |  ||| |||||||| |||| |||||||||    
T  14111110 ttataggattgagatcatgcaaacttggtcttacatttcctaaatggattcagacacagaagtacctgctcattcttgatatttctaatgctggaatttc 14111011  T
Q  309 tggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctcaaaggatctattccgaatctt 408  Q
     | ||||||||||||||||||||||| ||| ||||||||||| |||||  |||| |||||| |||| || || ||||||||||||   ||||| ||||||    
T  14111010 agataatgttccggagtggttttgggctaaactatcatcacaaaagtgcaggagcatcaacgtttcaaacaataatctcaaaggaataattccaaatctt 14110911  T
Q  409 caagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctac 481  Q
    ||||| ||||||||||| |||| | |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  14110910 caagtaaaaaattattgctctagtttatctctttcattaaatgaatttgaagggcccattccaccatttctac 14110838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 88 - 518
Target Start/End: Complemental strand, 13933103 - 13932673
Alignment:
Q  88 aatggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatgga 187  Q
    |||||||||||||| || || |||||| ||||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||||  |||| |||     
T  13933103 aatggtgtgatctctgaatttcatttttctggtatgtcaatgttaaaggaattagacttgtcagacaattcactagcattgagatttactgaaaattggg 13933004  T
Q  188 tgccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcga 287  Q
    | ||||||||||||||  ||| |||| |||| |||||| |||| |||||| ||||||||||||||||||||||||| |||||  || ||     ||| ||    
T  13933003 tcccaccttttcaactgaacagtataggattgagatcaagcaaacttggtcttacatttcctaaatggattcagacacaaaagtacctgctggatcttga 13932904  T
Q  288 tatttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctc 387  Q
    |||||| || | ||||||||| | ||||||||| ||||||||||||| ||| |||||||||||  | ||    || ||||| ||||| || || ||||||    
T  13932903 tatttcgaaggctggaatttcagataatgttccagagtggttttgggctaaactatcatcacaagaatgcaacagcatcaatatttcaaacaataatctc 13932804  T
Q  388 aaaggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctacggggtt 487  Q
    ||||| || ||||| ||||||||||| |||||| | |||||| || |||||||||||||||||||||||||||||| ||||||| ||||| |||  ||||    
T  13932803 aaaggttcaattccaaatcttcaagtcaaaaatcactgttctcttttatctctttcatcaaatgaatttgaagggcctattccagcatttttacaaggtt 13932704  T
Q  488 ctggattcattgatctatccaaaaataaatt 518  Q
    ||| | | |||||| | |||||||| |||||    
T  13932703 ctgcacttattgatttgtccaaaaacaaatt 13932673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 89 - 519
Target Start/End: Original strand, 13874611 - 13875041
Alignment:
Q  89 atggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatggat 188  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||| |||| ||| |    
T  13874611 atggtgtgatctctgaattccatttttctggtatgtcaatgttaaaggaattagacttgtctgacaattcactagtattgagatttaccgaaaactgggt 13874710  T
Q  189 gccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcgat 288  Q
     || ||||||||  | || |||||| ||||  |||| ||||| |||||| |||||||||| |||||||||||||| ||||| |||||  |   | | |||    
T  13874711 cccgccttttcagttgcaaactataggattgggatcttgcaaacttggtcttacatttccaaaatggattcagacacaaaatcactttcaggatattgat 13874810  T
Q  289 atttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctca 388  Q
    ||||| |||  ||||||||| | ||||||||| ||||||||||||| ||| |||||||||||  ||||   || ||||||||||||  | ||||||||||    
T  13874811 atttctaattctggaatttcagataatgttcccgagtggttttgggctaaactatcatcacaagagtgcaagacaatcaacatttcatacaacaatctca 13874910  T
Q  389 aaggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctacggggttc 488  Q
    ||||||  |||||||||||||| || |||||| |||||||| || |||||||| |||||||| ||||||||||    ||||||||||||||  | |||||    
T  13874911 aaggattaattccgaatcttcatgtaaaaaatcattgttcttttttatctcttgcatcaaatcaatttgaaggctccattccaccatttctcagaggttc 13875010  T
Q  489 tggattcattgatctatccaaaaataaattc 519  Q
    || ||  |||||| | |||||||| ||||||    
T  13875011 tgtatctattgatttgtccaaaaacaaattc 13875041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 88 - 515
Target Start/End: Original strand, 13472307 - 13472734
Alignment:
Q  88 aatggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatgga 187  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||   | ||||  ||||||||||| |||||  |||||||||||||  |||| |||     
T  13472307 aatggcgtgatctccgacttccatttttctggtatgtcaatgttaagatatttatatttgtctgacaactcactggcattgagatttacagaaaactggg 13472406  T
Q  188 tgccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcga 287  Q
    | || ||||| |||||  |||||||    ||  |||||||||| |||||| |||||||||| |||||||||||||| |||||| || || ||  ||| ||    
T  13472407 tcccgcctttccaactgtacactatggatttgggatcatgcaaacttggtcttacatttcccaaatggattcagacacaaaaatacctgcacaatcttga 13472506  T
Q  288 tatttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctc 387  Q
    |||||| |||| ||||||||| | ||||||||| ||||||||||||  ||| |||||||| ||  | || |  ||||||||||||||  |||||||||||    
T  13472507 tatttctaatggtggaatttcagataatgttccagagtggttttggtctaaactatcatcccaagactgctctagaatcaacatttcctataacaatctc 13472606  T
Q  388 aaaggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctacggggtt 487  Q
    |||||||  ||||| ||||||||||| |||||| |||||||| || ||| |||||||||||||||||||||||||   ||||||||||||||| | ||||    
T  13472607 aaaggattaattccaaatcttcaagtaaaaaatcattgttcttttttatatctttcatcaaatgaatttgaagggtccattccaccatttctaagaggtt 13472706  T
Q  488 ctggattcattgatctatccaaaaataa 515  Q
    ||  ||| |||||||| |||||||||||    
T  13472707 cttcatttattgatctgtccaaaaataa 13472734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 88 - 528
Target Start/End: Original strand, 13862140 - 13862580
Alignment:
Q  88 aatggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatgga 187  Q
    |||||||||||||| || || |||||| |||||||||||||||||||||| |||  |||||| | |||||||||| |||||||||||| | |||| |||     
T  13862140 aatggtgtgatctctgaatttcatttttctggtatgtcaatgttaaaggatttagacttgtcaggcaattcactagcattgagatttaacgaaaattggg 13862239  T
Q  188 tgccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcga 287  Q
    ||||||||||||||||  |||||||| ||||  |||| ||||  || ||   |||||||||||| |||||| ||||||||||  ||||| |   ||||||    
T  13862240 tgccaccttttcaactggacactataggattgggatcctgcatactcggacctacatttcctaagtggattaagactcaaaagtacttgcaatttctcga 13862339  T
Q  288 tatttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctc 387  Q
    |||||| |||| || |||||| | ||||||||| ||||||||||||| ||| |||||||  || | |||    | ||| |||||||| || || |||||     
T  13862340 tatttctaatgctgaaatttcagataatgttcctgagtggttttgggataatctatcattgcaaatgtgcaatacaataaacatttcaaacaataatctt 13862439  T
Q  388 aaaggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctacggggtt 487  Q
    |||||||| ||||| ||| |  |||| |||||| | |||||| || ||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||    
T  13862440 aaaggatcaattccaaatttaaaagtaaaaaatcactgttctcttttatctctttcatcaaatgattttgaagggcccattccaccatttctacgaggtt 13862539  T
Q  488 ctggattcattgatctatccaaaaataaattcacaggttct 528  Q
    ||||| | ||||||||||| |||||||||||| ||| ||||    
T  13862540 ctggacttattgatctatcgaaaaataaattctcagattct 13862580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 90 - 519
Target Start/End: Complemental strand, 14048083 - 14047654
Alignment:
Q  90 tggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatggatg 189  Q
    |||||||||||| ||||||||||||  |||||||||||||||||   | ||||  ||||||||||| ||| || |||||||||||||| |||| ||| |     
T  14048083 tggtgtgatctctgacttccatttttatggtatgtcaatgttaagatacttatatttgtctgacaactcaatagcattgagatttaccgaaaactgggtc 14047984  T
Q  190 ccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctcgata 289  Q
    || ||||||||||| |||  |||| || |  | |||||||| |||||| |||| |||||||||||||||| ||| |||||| || || |   ||| ||||    
T  14047983 ccgccttttcaactgcacgatataggaatgggttcatgcaaacttggtcttacgtttcctaaatggattctgacacaaaaatacctgcattatcttgata 14047884  T
Q  290 tttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatctcaa 389  Q
    |||| |||| ||||||||| | ||||||||| ||||||||||||| ||| ||||||||||   ||||  | |  || |||||||  || || ||||||||    
T  14047883 tttcgaatgctggaatttcagataatgttccagagtggttttgggctaaactatcatcaccagagtgcagcaacatgaacattttaaacaataatctcaa 14047784  T
Q  390 aggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctacggggttct 489  Q
    |||||  ||||| ||||||||||  |||| | | |||||| || |||||||||||||||||||||||||||||   | |||||| |||||||  ||||||    
T  14047783 aggattaattccaaatcttcaagccaaaagtcaatgttcttttttatctctttcatcaaatgaatttgaagggtccactccaccttttctactaggttct 14047684  T
Q  490 ggattcattgatctatccaaaaataaattc 519  Q
    ||||| |||||||| |||||||||||||||    
T  14047683 ggattaattgatctttccaaaaataaattc 14047654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 86 - 520
Target Start/End: Complemental strand, 14085424 - 14084990
Alignment:
Q  86 taaatggtgtgatctcagacttccattttgctggtatgtcaatgttaaaggaattatccttgtctgacaattcactaacattgagatttacccaaaaatg 185  Q
    |||||||||||||||| |||||||||||| |||||||||||||| || |||| |||  ||||||| |||||| |||| |||| || ||| || |||||||    
T  14085424 taaatggtgtgatctctgacttccatttttctggtatgtcaatgctagaggagttagacttgtcttacaatttactagcattaagttttgccgaaaaatg 14085325  T
Q  186 gatgccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagactcaaaaacacttgtaccgtctc 285  Q
    | | || |||||||||||   || |||| ||||  |||| ||||| ||||||   ||||||||||||||||||||||| |||||| ||||      |||     
T  14085324 ggtcccgccttttcaactgggcattataggattgggatcctgcaaacttggttcaacatttcctaaatggattcagacacaaaaatactttcgatatctt 14085225  T
Q  286 gatatttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcacagaagtgttggagaatcaacatttctaataacaatc 385  Q
    |||||||| |||| |||| |||| | |||| |||| |||||||||||||  || |||||||||||  ||||  ||| ||||||| ||||| | ||||||     
T  14085224 gatatttctaatgctggagtttcagataatattccagagtggttttgggcaaaactatcatcacaagagtgcaggacaatcaacctttcttacaacaatt 14085125  T
Q  386 tcaaaggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttctacgggg 485  Q
    |||||||||| ||||||||||| ||  | | ||||||||||||| || ||| ||| |||||||||||||||||||| |  ||||||||||||||  | ||    
T  14085124 tcaaaggatcaattccgaatctccacataagaaattattgttcttttttatttctgtcatcaaatgaatttgaaggtcccattccaccatttcttagagg 14085025  T
Q  486 ttctggattcattgatctatccaaaaataaattca 520  Q
    |||   |   |||||||| ||||||||||||||||    
T  14085024 ttccataaatattgatctgtccaaaaataaattca 14084990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 164 - 350
Target Start/End: Complemental strand, 13929018 - 13928832
Alignment:
Q  164 cattgagatttacccaaaaatggatgccaccttttcaactccacactataagattaagatcatgcaatcttggtattacatttcctaaatggattcagac 263  Q
    |||||||||||||| || | ||| | || |||||||||||  |||||||   ||| ||||| ||||| |||||| |||||||||||||||||||||||||    
T  13929018 cattgagatttaccgaagattgggtcccgccttttcaactggacactatggaattgagatcctgcaaacttggtcttacatttcctaaatggattcagac 13928919  T
Q  264 tcaaaaacacttgtaccgtctcgatatttccaatgttggaatttctggtaatgttccggagtggttttggggtaagctatcatcaca 350  Q
     ||||||||| |      ||| |||||||| |||| ||||||||| | ||||||||| ||||||||||||| ||| |||||||||||    
T  13928918 acaaaaacacattctgaatcttgatatttctaatgctggaatttcagataatgttcccgagtggttttgggctaaactatcatcaca 13928832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 479
Target Start/End: Complemental strand, 13912284 - 13912187
Alignment:
Q  382 aatctcaaaggatctattccgaatcttcaagtgaaaaattattgttctattgtatctctttcatcaaatgaatttgaagggcatattccaccatttct 479  Q
    ||||||||||| |  ||||| ||||||||||| ||||||  ||||||| || |||| |||||||||||||||||||||||||  ||||||||||||||    
T  13912284 aatctcaaaggcttaattccaaatcttcaagtaaaaaatctttgttctgttttatcactttcatcaaatgaatttgaagggcccattccaccatttct 13912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 13892173 - 13892236
Alignment:
Q  19 aatggcacactatccaatctctcaatattctcatctttggaaatatttgatatttctgaaaata 82  Q
    |||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13892173 aatggcacactacctgatctctcgatattctcatctttggaaatatttgatatttctgaaaata 13892236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 14048226 - 14048163
Alignment:
Q  19 aatggcacactatccaatctctcaatattctcatctttggaaatatttgatatttctgaaaata 82  Q
    ||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14048226 aatgggacactacctaatctctcaatattctcatttttggaaatatttgatatttctgaaaata 14048163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 13933244 - 13933181
Alignment:
Q  19 aatggcacactatccaatctctcaatattctcatctttggaaatatttgatatttctgaaaata 82  Q
    |||||||||||| |  |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  13933244 aatggcacactacctgatctctcaatattctcatttttggaaatattcgatatttctgaaaata 13933181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 14085563 - 14085490
Alignment:
Q  19 aatggcacactatccaatctctcaatattctcatctttggaaatatttgatatttctgaaaataaagtaaatgg 92  Q
    |||||||||||| |  |||| ||||||||||| | ||||||||||||||||||||||||||||| | |||||||    
T  14085563 aatggcacactacctgatctgtcaatattctcctttttggaaatatttgatatttctgaaaatagactaaatgg 14085490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 14026175 - 14026114
Alignment:
Q  21 tggcacactatccaatctctcaatattctcatctttggaaatatttgatatttctgaaaata 82  Q
    |||||||||| |  ||||||||||||||| || ||||||||| |||||||||||||||||||    
T  14026175 tggcacactacctgatctctcaatattcttatttttggaaatgtttgatatttctgaaaata 14026114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 14111369 - 14111308
Alignment:
Q  22 ggcacactatccaatctctcaatattctcatctttggaaatatttgatatttctgaaaataa 83  Q
    ||||||||| |  |||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  14111369 ggcacactacctgatctctcaatattcccatttttggagatatttgatatttctgaaaataa 14111308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 13874485 - 13874533
Alignment:
Q  35 atctctcaatattctcatctttggaaatatttgatatttctgaaaataa 83  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  13874485 atctctcaatattctcattcttggaaatatttgatatttctaaaaataa 13874533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 13472181 - 13472229
Alignment:
Q  34 aatctctcaatattctcatctttggaaatatttgatatttctgaaaata 82  Q
    ||||| ||||||||||||| |||||||| ||| ||||||||||||||||    
T  13472181 aatctttcaatattctcatttttggaaacattcgatatttctgaaaata 13472229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 13862015 - 13862062
Alignment:
Q  35 atctctcaatattctcatctttggaaatatttgatatttctgaaaata 82  Q
    ||||||||||||||||   |||||||||||||||||||||| ||||||    
T  13862015 atctctcaatattctcccttttggaaatatttgatatttctaaaaata 13862062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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