View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6948_low_12 (Length: 360)
Name: NF6948_low_12
Description: NF6948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6948_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 9 - 341
Target Start/End: Original strand, 37664441 - 37664775
Alignment:
| Q |
9 |
gaataatatggttacatgtttccataattgcatttctgagaagttcacgaaacaattttcgtgacatccagcattatttatataatatttatcccgcatt |
108 |
Q |
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| T |
37664441 |
gaataatatggttacatgtttccataattgcatttctgagaagttcatgaaacaattttcgtgacatccagcattatttatataatatttatcccgcatt |
37664540 |
T |
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| Q |
109 |
gaattgaataaaaacggttttctaactaatttctacaccgaaccatccaaacttcgttcttcacatttcaaatttaaaacgcggaaaggtgttttgctta |
208 |
Q |
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| T |
37664541 |
gaattgaataaaaacagttttctaactaatttctacaccgaaccatccaaacttcgttcttcacatttcaaatttaaaacatggaaaggtgttttgctta |
37664640 |
T |
|
| Q |
209 |
tctataaattaaattatagccttacatacaagcaccaatgttcaattcatttatgtatattcaagcatctcgacacaaaaatctaattaaattttatgat |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37664641 |
tctataaattaaattatagccttacatacaagcaccaatgttcaattcatttatgtatattcaagcatctcgacacaaaaatctaattaaattttatgat |
37664740 |
T |
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| Q |
309 |
c--atatatattctaccgtctcaacgcaaacaaaa |
341 |
Q |
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| T |
37664741 |
catatatatattctaccgtctcaacgcaaacaaaa |
37664775 |
T |
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