View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6948_low_24 (Length: 275)

Name: NF6948_low_24
Description: NF6948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6948_low_24
NF6948_low_24
[»] chr8 (36 HSPs)
chr8 (5-257)||(6286301-6286553)
chr8 (24-84)||(21695412-21695472)
chr8 (20-83)||(24380353-24380416)
chr8 (22-84)||(14271877-14271939)
chr8 (23-83)||(29380960-29381021)
chr8 (19-83)||(12342891-12342955)
chr8 (23-83)||(19265859-19265919)
chr8 (44-84)||(21316841-21316881)
chr8 (20-86)||(24381322-24381389)
chr8 (28-83)||(25481505-25481560)
chr8 (28-83)||(26139830-26139885)
chr8 (49-84)||(29765390-29765425)
chr8 (22-84)||(24908940-24909002)
chr8 (22-84)||(24911161-24911223)
chr8 (23-76)||(15176439-15176492)
chr8 (23-84)||(17510941-17511002)
chr8 (50-83)||(20400398-20400431)
chr8 (22-83)||(28858872-28858932)
chr8 (39-87)||(18836845-18836893)
chr8 (23-83)||(19705023-19705083)
chr8 (20-84)||(19791427-19791491)
chr8 (23-83)||(23867829-23867889)
chr8 (20-80)||(30117661-30117721)
chr8 (20-83)||(4007151-4007214)
chr8 (44-83)||(6886728-6886767)
chr8 (44-83)||(28621662-28621701)
chr8 (23-81)||(24583173-24583231)
chr8 (51-84)||(18570557-18570590)
chr8 (54-83)||(24389824-24389853)
chr8 (44-81)||(26829468-26829505)
chr8 (20-68)||(7985151-7985199)
chr8 (23-83)||(13313271-13313331)
chr8 (44-84)||(17100205-17100245)
chr8 (51-83)||(24850957-24850989)
chr8 (20-84)||(25180720-25180784)
chr8 (52-84)||(25227325-25227357)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-84)||(88435-88518)
[»] scaffold0386 (3 HSPs)
scaffold0386 (9-81)||(4874-4946)
scaffold0386 (9-83)||(13474-13548)
scaffold0386 (20-83)||(9112-9174)
[»] chr6 (23 HSPs)
chr6 (20-83)||(21687129-21687192)
chr6 (20-76)||(22564556-22564612)
chr6 (23-86)||(1636670-1636733)
chr6 (24-83)||(24480062-24480121)
chr6 (23-85)||(14727171-14727233)
chr6 (20-82)||(23644318-23644380)
chr6 (23-83)||(19246313-19246373)
chr6 (25-84)||(31878847-31878906)
chr6 (24-82)||(24469836-24469894)
chr6 (20-73)||(6628984-6629037)
chr6 (50-83)||(14076460-14076493)
chr6 (23-84)||(14641669-14641730)
chr6 (44-83)||(8038050-8038089)
chr6 (24-74)||(27961252-27961302)
chr6 (50-83)||(14078102-14078135)
chr6 (42-79)||(17822027-17822064)
chr6 (55-88)||(20080782-20080815)
chr6 (55-88)||(24389165-24389198)
chr6 (44-81)||(26820918-26820955)
chr6 (23-83)||(9848200-9848260)
chr6 (44-84)||(17384081-17384121)
chr6 (23-83)||(22404254-22404314)
chr6 (52-84)||(22569920-22569952)
[»] chr4 (25 HSPs)
chr4 (20-83)||(25025140-25025203)
chr4 (19-84)||(9849706-9849771)
chr4 (20-84)||(17277879-17277943)
chr4 (23-83)||(15166505-15166565)
chr4 (23-82)||(8968072-8968131)
chr4 (20-66)||(5691789-5691835)
chr4 (49-83)||(19556541-19556575)
chr4 (23-84)||(11252128-11252189)
chr4 (22-71)||(16669733-16669782)
chr4 (23-84)||(17434471-17434532)
chr4 (19-84)||(19919138-19919203)
chr4 (28-84)||(4617136-4617192)
chr4 (44-84)||(17218586-17218626)
chr4 (43-83)||(22171805-22171845)
chr4 (20-84)||(22350239-22350303)
chr4 (23-82)||(9536756-9536815)
chr4 (22-85)||(13588744-13588807)
chr4 (14-73)||(19883522-19883581)
chr4 (23-72)||(10106332-10106381)
chr4 (23-84)||(17335354-17335415)
chr4 (51-84)||(22346144-22346177)
chr4 (24-84)||(11782530-11782590)
chr4 (23-83)||(15047804-15047864)
chr4 (23-83)||(15106560-15106620)
chr4 (51-83)||(19335225-19335257)
[»] chr3 (27 HSPs)
chr3 (20-83)||(18535804-18535867)
chr3 (20-84)||(52935532-52935596)
chr3 (22-85)||(819844-819907)
chr3 (22-84)||(7805778-7805840)
chr3 (10-84)||(31283902-31283976)
chr3 (23-80)||(8145285-8145342)
chr3 (20-82)||(3429225-3429287)
chr3 (22-83)||(20886904-20886965)
chr3 (23-83)||(12517327-12517387)
chr3 (23-83)||(19912617-19912677)
chr3 (49-84)||(18735300-18735335)
chr3 (19-86)||(20891642-20891709)
chr3 (20-83)||(22470402-22470465)
chr3 (29-83)||(16242194-16242248)
chr3 (23-84)||(13938845-13938906)
chr3 (50-83)||(16228344-16228377)
chr3 (23-84)||(34276436-34276497)
chr3 (24-64)||(13906602-13906642)
chr3 (49-84)||(1096760-1096795)
chr3 (44-86)||(27074010-27074052)
chr3 (44-85)||(27412656-27412697)
chr3 (22-83)||(27852603-27852664)
chr3 (44-76)||(12771209-12771241)
chr3 (49-77)||(19170117-19170145)
chr3 (51-83)||(19533837-19533869)
chr3 (20-80)||(22247031-22247090)
chr3 (23-79)||(25850952-25851008)
[»] chr5 (20 HSPs)
chr5 (19-81)||(24263752-24263814)
chr5 (20-84)||(34488891-34488955)
chr5 (44-86)||(23214822-23214864)
chr5 (23-84)||(25572477-25572538)
chr5 (23-83)||(23338928-23338988)
chr5 (23-83)||(29987994-29988054)
chr5 (20-83)||(17469558-17469621)
chr5 (44-84)||(17831751-17831791)
chr5 (23-82)||(24320522-24320582)
chr5 (44-84)||(24513195-24513235)
chr5 (44-83)||(18939578-18939617)
chr5 (28-83)||(20548453-20548508)
chr5 (44-83)||(21352973-21353012)
chr5 (49-84)||(31600074-31600109)
chr5 (49-83)||(19761581-19761615)
chr5 (23-84)||(20860376-20860437)
chr5 (20-81)||(25920865-25920926)
chr5 (44-80)||(24162014-24162050)
chr5 (23-83)||(25400738-25400798)
chr5 (51-83)||(26315251-26315283)
[»] chr2 (36 HSPs)
chr2 (15-81)||(28766881-28766947)
chr2 (20-85)||(17891765-17891830)
chr2 (23-83)||(26313215-26313275)
chr2 (24-83)||(16157084-16157143)
chr2 (28-83)||(25537598-25537653)
chr2 (20-83)||(35680100-35680163)
chr2 (49-83)||(29144698-29144732)
chr2 (24-85)||(25882568-25882629)
chr2 (23-84)||(25886190-25886251)
chr2 (22-83)||(32130699-32130760)
chr2 (22-83)||(32137912-32137973)
chr2 (22-83)||(32139334-32139395)
chr2 (15-83)||(18553318-18553386)
chr2 (20-83)||(45572365-45572429)
chr2 (20-83)||(45576032-45576096)
chr2 (20-83)||(45579699-45579763)
chr2 (20-83)||(45583366-45583430)
chr2 (20-83)||(45587033-45587097)
chr2 (20-83)||(45590700-45590764)
chr2 (20-83)||(45594367-45594431)
chr2 (20-83)||(45598034-45598098)
chr2 (20-83)||(45601701-45601765)
chr2 (20-83)||(45605368-45605432)
chr2 (20-83)||(45609035-45609099)
chr2 (20-83)||(45612702-45612766)
chr2 (20-83)||(45616369-45616433)
chr2 (44-83)||(21905784-21905823)
chr2 (20-83)||(23010043-23010106)
chr2 (28-82)||(18120546-18120600)
chr2 (23-81)||(22569091-22569149)
chr2 (30-84)||(25922649-25922703)
chr2 (22-84)||(32087084-32087146)
chr2 (49-83)||(34574577-34574611)
chr2 (23-84)||(28918225-28918286)
chr2 (23-79)||(24086310-24086366)
chr2 (23-79)||(29851053-29851109)
[»] chr1 (29 HSPs)
chr1 (21-83)||(9782979-9783041)
chr1 (23-83)||(14782567-14782627)
chr1 (23-83)||(21663090-21663150)
chr1 (23-83)||(26611331-26611391)
chr1 (20-83)||(33192386-33192449)
chr1 (23-84)||(12210302-12210363)
chr1 (22-83)||(15571688-15571749)
chr1 (19-84)||(26647356-26647421)
chr1 (20-83)||(27116223-27116286)
chr1 (25-83)||(22621832-22621890)
chr1 (23-88)||(15542303-15542368)
chr1 (20-85)||(18098246-18098311)
chr1 (23-84)||(25402434-25402495)
chr1 (23-83)||(729173-729233)
chr1 (23-83)||(11845221-11845281)
chr1 (20-84)||(16114834-16114898)
chr1 (44-84)||(18734584-18734624)
chr1 (19-83)||(35133917-35133981)
chr1 (24-83)||(14235284-14235343)
chr1 (28-83)||(22426515-22426570)
chr1 (20-79)||(22626158-22626217)
chr1 (44-83)||(24464672-24464711)
chr1 (44-81)||(26022443-26022480)
chr1 (44-84)||(15158787-15158827)
chr1 (51-83)||(18527496-18527528)
chr1 (44-84)||(18827454-18827494)
chr1 (22-86)||(22665822-22665886)
chr1 (44-84)||(27912122-27912162)
chr1 (23-71)||(27973340-27973388)
[»] chr7 (41 HSPs)
chr7 (20-81)||(21707339-21707400)
chr7 (23-83)||(13280796-13280856)
chr7 (23-83)||(2927911-2927971)
chr7 (23-83)||(3585522-3585582)
chr7 (19-83)||(10585187-10585251)
chr7 (20-80)||(14195782-14195842)
chr7 (44-84)||(19154876-19154916)
chr7 (44-84)||(20754275-20754315)
chr7 (20-84)||(23127893-23127957)
chr7 (23-83)||(26249075-26249135)
chr7 (20-83)||(1767410-1767473)
chr7 (20-83)||(9767819-9767882)
chr7 (20-83)||(23897274-23897337)
chr7 (22-84)||(10332440-10332502)
chr7 (22-84)||(18468338-18468400)
chr7 (23-84)||(18986743-18986804)
chr7 (23-84)||(19001371-19001432)
chr7 (44-84)||(2506819-2506859)
chr7 (20-76)||(3736370-3736426)
chr7 (23-83)||(4450708-4450768)
chr7 (19-83)||(6018391-6018455)
chr7 (44-84)||(13252706-13252746)
chr7 (44-84)||(19201321-19201361)
chr7 (23-83)||(23173685-23173745)
chr7 (24-83)||(2565944-2566003)
chr7 (23-74)||(8977479-8977530)
chr7 (49-84)||(9078880-9078915)
chr7 (22-85)||(9722477-9722540)
chr7 (44-83)||(10414279-10414318)
chr7 (49-83)||(4994790-4994824)
chr7 (23-85)||(8052427-8052488)
chr7 (23-85)||(11804735-11804797)
chr7 (22-83)||(1810940-1811001)
chr7 (20-81)||(3692762-3692823)
chr7 (20-73)||(9288944-9288997)
chr7 (20-73)||(9298736-9298789)
chr7 (43-84)||(19201515-19201556)
chr7 (23-84)||(39270272-39270332)
chr7 (28-84)||(13287709-13287765)
chr7 (51-83)||(17887730-17887762)
chr7 (52-84)||(20577557-20577589)
[»] scaffold0094 (1 HSPs)
scaffold0094 (22-83)||(12266-12327)
[»] scaffold0258 (1 HSPs)
scaffold0258 (44-83)||(20252-20291)
[»] scaffold0024 (1 HSPs)
scaffold0024 (20-83)||(41373-41435)
[»] scaffold0871 (1 HSPs)
scaffold0871 (49-82)||(4021-4054)
[»] scaffold0014 (1 HSPs)
scaffold0014 (50-83)||(192186-192219)
[»] scaffold0056 (1 HSPs)
scaffold0056 (44-84)||(23094-23134)
[»] scaffold0032 (1 HSPs)
scaffold0032 (23-83)||(92828-92888)


Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 5 - 257
Target Start/End: Original strand, 6286301 - 6286553
Alignment:
Q  5 acttctctactttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcactaccgcattaagtctaagga 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6286301 acttctctactttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcactaccgcattaagtctaagga 6286400  T
Q  105 agttgggatcaccttttgtatgtggtaacctggttaaattagcttggtgatttcaaactatgaactctgagtaccagtttagttaaaagagatctatgat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6286401 agttgggatcaccttttgtatgtggtaacctggttaaattagcttggtgatttcaaactatgaactctgagtaccagtttagttaaaagagatctatgat 6286500  T
Q  205 gttggaagaatgttggaagcctagcttagatgaaaagagttggatgactatag 257  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6286501 gttggaagaatgttggaaggctagcttagatgaaaagagttggatgactatag 6286553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 21695472 - 21695412
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||| |||||||  |||| |||||||||||||||||||||||||| |||||||||    
T  21695472 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatcac 21695412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 24380416 - 24380353
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||| |||||||  |||| |||||||||||||||||||||||||| ||| ||||    
T  24380416 tggtaaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagatgacatgttatca 24380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 14271877 - 14271939
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||| |||  | | |||| ||||||||||||||||||||||||||||||||||||    
T  14271877 gtaaaacctactgaaaaaggttgaaaaacatgctaagaataacgtaagatgacctgtcatcac 14271939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 29381021 - 29380960
Alignment:
Q  23 taaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| | ||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  29381021 taaaacctattgaaattgaataaaaaaacatgctaagaataacgtaagatgacctgtcatca 29380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 12342955 - 12342891
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||| ||  |||| ||| | |||||||||||||||||||| ||||||||    
T  12342955 ttggtaaaacctactaaaatagactgaaaaacaagttaagaataacgtaagatgacatgtcatca 12342891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 19265859 - 19265919
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||  |  |||| |||||||||||||||||||||||||||||||||||    
T  19265859 taaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 19265919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 21316841 - 21316881
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  21316841 gaaaaacatgctaagaataacgtaagatgacctgtcatcac 21316881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 24381389 - 24381322
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaaga-catgctaagaataacgtaagatgacctgtcatcacta 86  Q
    ||||||||||| || |||||||  |||| | ||||||||||||||| |||||||||||||||||||||    
T  24381389 tggtaaaacctgctgaaattgactgaaaaaacatgctaagaataacttaagatgacctgtcatcacta 24381322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 25481560 - 25481505
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||| || | ||  ||||||||||||||||||||||||||||||||||    
T  25481560 cctactaaaattaattgtaaagcatgctaagaataacgtaagatgacctgtcatca 25481505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 26139830 - 26139885
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||  || |||| |||||||||||||||||||||||||||| ||||||    
T  26139830 cctactaaaataaattgaaaaacatgctaagaataacgtaagatgacctttcatca 26139885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 29765425 - 29765390
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||||||||||||||||||||||||    
T  29765425 acatgctaagaataacgtaagatgacctgtcatcac 29765390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 24908940 - 24909002
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||| | |||||||| |||| ||||||||| ||||||||||  ||||||||||||||    
T  24908940 gtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcac 24909002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 24911161 - 24911223
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||| | |||||||| |||| ||||||||| ||||||||||  ||||||||||||||    
T  24911161 gtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcac 24911223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 15176492 - 15176439
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacct 76  Q
    ||||||||||| |||||||  |||| ||||||||||||||| ||||||||||||    
T  15176492 taaaacctactgaaattgactgaaacacatgctaagaataatgtaagatgacct 15176439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 17510941 - 17511002
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| ||| |||  |||| ||||||||||||||| |||||||||||| |||||||    
T  17510941 taaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgacctatcatcac 17511002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 20400398 - 20400431
Alignment:
Q  50 catgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||||||||||||||    
T  20400398 catgctaagaataacgtaagatgacctgtcatca 20400431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 28858872 - 28858932
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||| |||  |||| ||||||||||||||| |||||||| ||||||||||    
T  28858872 gtaaaacctactaaaaatgactgaaa-acatgctaagaataatgtaagatggcctgtcatca 28858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 18836845 - 18836893
Alignment:
Q  39 tgatagaaagacatgctaagaataacgtaagatgacctgtcatcactac 87  Q
    |||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  18836845 tgattgaaaaacatgctaagaataatgtaagatgatctgtcatcactac 18836893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 19705023 - 19705083
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  |||| |||| ||||||||||||||||||||| ||||||||    
T  19705023 taaaacctactgaaaatgactgaaaaacatactaagaataacgtaagatgacatgtcatca 19705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19791427 - 19791491
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||| |||||| ||  |||| |||||||||  |||||||||||||| ||||||||||    
T  19791427 tggtaaaacctattaaaatagactgaaaaacatgctaattataacgtaagatgatctgtcatcac 19791491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 23867889 - 23867829
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||| ||   |||| |||| |||||||| |||||||||||||||||||||    
T  23867889 taaaacctactaaaaatgcctgaaaaacatactaagaattacgtaagatgacctgtcatca 23867829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 30117721 - 30117661
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtca 80  Q
    |||||||||||||| ||| |||  |||| ||||||||| ||||||||||||| ||||||||    
T  30117721 tggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagataacctgtca 30117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 4007214 - 4007151
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| ||||||||||||| |||  |||| ||||||||| | |||| ||||||||||||||||||    
T  4007214 tggtgaaacctactaaaaatgactgaaaaacatgctaatattaacataagatgacctgtcatca 4007151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 6886728 - 6886767
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  6886728 gaaaaacatgctaagaataacgtaagatgacttgtcatca 6886767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 28621662 - 28621701
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  28621662 gaaaaacatgctaagaataacgttagatgacctgtcatca 28621701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 24583231 - 24583173
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    ||||| ||||||||| |||  |||| |||||||||||||||| ||| ||||||||||||    
T  24583231 taaaatctactaaaaatgactgaaaaacatgctaagaataacataaaatgacctgtcat 24583173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 18570557 - 18570590
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||||||||||| ||||||||||    
T  18570557 atgctaagaataacgtaagatgatctgtcatcac 18570590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 83
Target Start/End: Original strand, 24389824 - 24389853
Alignment:
Q  54 ctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||||||||||    
T  24389824 ctaagaataacgtaagatgacctgtcatca 24389853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 26829505 - 26829468
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  26829505 gaaaaacatgctaagaataacgtaagatgacgtgtcat 26829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 7985151 - 7985199
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaa 68  Q
    ||||||||||||||||| ||||  |||| ||||| ||||||||||||||    
T  7985151 tggtaaaacctactaaatttgactgaaatacatgttaagaataacgtaa 7985199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 13313331 - 13313271
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| | ||| |||  |||| |||||||||||||||||||||| ||| ||||||||    
T  13313331 taaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagacgacatgtcatca 13313271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 17100245 - 17100205
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| |||||||||||||||| | |||||||||||||||||    
T  17100245 gaaaaacatgctaagaataacttgagatgacctgtcatcac 17100205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 24850989 - 24850957
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||| |||||||||||||||||||||||||    
T  24850989 atgctaaaaataacgtaagatgacctgtcatca 24850957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 25180784 - 25180720
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||| || || ||  |||| ||||| |||| ||||||||||||||| |||||||||    
T  25180784 tggtaaaacctacgaacatagactgaaaaacatgttaaggataacgtaagatgacatgtcatcac 25180720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 25227325 - 25227357
Alignment:
Q  52 tgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||| ||||||||||||||||||||    
T  25227325 tgctaagaataatgtaagatgacctgtcatcac 25227357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 88518 - 88435
Alignment:
Q  1 taagacttctctactttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||| ||||| ||| ||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||| |||||||||    
T  88518 taagactcctctatttttttggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcatcac 88435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 4946 - 4874
Alignment:
Q  9 ctctactttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    |||||||||  ||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||    
T  4946 ctctactttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcat 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 13548 - 13474
Alignment:
Q  9 ctctactttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||||||  |||||||||| ||| ||||    
T  13548 ctctactttgttggtaaaacctactaaaattgattgaaaaacatgctaagaatattgtaagatgacttgtaatca 13474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 9174 - 9112
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||| |||||||||||||||  |||| | | |||||||||||||||||||||| ||||||||    
T  9174 tggtaatacctactaaaattgactgaaaaata-gctaagaataacgtaagatgacttgtcatca 9112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 21687192 - 21687129
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  21687192 tggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 21687129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 22564612 - 22564556
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacct 76  Q
    |||||||||||||||||| |||  |||| ||||||||||||||||||||||||||||    
T  22564612 tggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacct 22564556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 1636670 - 1636733
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcacta 86  Q
    ||||||||||||||| | |  |||| ||||||||||||||||||||||||| ||||||||||||    
T  1636670 taaaacctactaaaaataactgaaaaacatgctaagaataacgtaagatgatctgtcatcacta 1636733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 24480062 - 24480121
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||| ||| |||| |||| |||||||||||||||||||||||||||| ||||||    
T  24480062 aaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgacctatcatca 24480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 14727171 - 14727233
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    ||||||||||||||| |||  |||| ||||| ||| |||||||||||||||||||||||||||    
T  14727171 taaaacctactaaaaatgactgaaaaacatggtaataataacgtaagatgacctgtcatcact 14727233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 23644380 - 23644318
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 82  Q
    ||||||||||||||||||   || |||| ||||||||||||||||||||||| ||||||||||    
T  23644380 tggtaaaacctactaaaaacaattgaaaaacatgctaagaataacgtaagataacctgtcatc 23644318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 19246313 - 19246373
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||| ||  |||| ||||||| |||||||||| ||||||||||||||||    
T  19246313 taaaacctactaaaatagactgaaaaacatgcttagaataacgttagatgacctgtcatca 19246373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 31878906 - 31878847
Alignment:
Q  25 aaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||||| ||  |||| ||||||||||||||| |||||||||||| |||||||    
T  31878906 aaacctactaaaatagactgaaaaacatgctaagaataaagtaagatgacctctcatcac 31878847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 24469836 - 24469894
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 82  Q
    |||||||||| ||| |||| |||| |||| |||| ||||||||||||||||||||||||    
T  24469836 aaaacctactgaaaatgattgaaaaacatactaaaaataacgtaagatgacctgtcatc 24469894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 6629037 - 6628984
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatga 73  Q
    ||||||||||||||||||| |    |||||||||||||||||||||||||||||    
T  6629037 tggtaaaacctactaaaatagtctaaaagacatgctaagaataacgtaagatga 6628984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 14076460 - 14076493
Alignment:
Q  50 catgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||||||||||||||    
T  14076460 catgctaagaataacgtaagatgacctgtcatca 14076493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 14641669 - 14641730
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| ||| | |  |||| ||||||||||||||||||||||| ||||||||||||    
T  14641669 taaaacctactgaaaataactgaaaaacatgctaagaataacgtaagataacctgtcatcac 14641730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 8038089 - 8038050
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  8038089 gaaaaacaggctaagaataacgtaagatgacctgtcatca 8038050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 27961252 - 27961302
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgac 74  Q
    |||||||||| ||| |||| |||| ||||| ||||||||||||||||||||    
T  27961252 aaaacctactgaaaatgattgaaaaacatgttaagaataacgtaagatgac 27961302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 14078102 - 14078135
Alignment:
Q  50 catgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||| |||||||||||||||||||    
T  14078102 catgctaagaataatgtaagatgacctgtcatca 14078135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 17822064 - 17822027
Alignment:
Q  42 tagaaagacatgctaagaataacgtaagatgacctgtc 79  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  17822064 tagaaaaacatgctaagaataacgtaagatgacatgtc 17822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 20080782 - 20080815
Alignment:
Q  55 taagaataacgtaagatgacctgtcatcactacc 88  Q
    ||||||||||||||||||||||||||||| ||||    
T  20080782 taagaataacgtaagatgacctgtcatcattacc 20080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 24389198 - 24389165
Alignment:
Q  55 taagaataacgtaagatgacctgtcatcactacc 88  Q
    ||||||||||||||||||||||||||||| ||||    
T  24389198 taagaataacgtaagatgacctgtcatcattacc 24389165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 26820918 - 26820955
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  26820918 gaaaaacatgctaagagtaacgtaagatgacctgtcat 26820955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 9848200 - 9848260
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||| |||  |||| ||||| |||||||||||| | ||||| ||||||||    
T  9848200 taaaacctactaaaaatgactgaaaaacatgttaagaataacgtcaaatgacatgtcatca 9848260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 17384081 - 17384121
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||| ||||||||| ||||||||||    
T  17384081 gaaaaacatgctaagaataatgtaagatgatctgtcatcac 17384121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 22404314 - 22404254
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||||| |  |||| ||||| ||||||||||| |||||||| ||||||||    
T  22404314 taaaacctactgaaatttactgaaaaacatgataagaataacgaaagatgacatgtcatca 22404254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 22569920 - 22569952
Alignment:
Q  52 tgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||| ||||||||||||||||||||    
T  22569920 tgctaagaataaagtaagatgacctgtcatcac 22569952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 25025140 - 25025203
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||| |||  |||| |||||||||||||||||||||||||||||||||||    
T  25025140 tggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25025203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 9849771 - 9849706
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||||||| |||  |||| |||| |||||||||||||||||||||||||||||||    
T  9849771 ttggtaaaacctactaaaaatgactgaaaaacatactaagaataacgtaagatgacctgtcatcac 9849706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 17277879 - 17277943
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||| ||||||||| ||  |||| |||||||||||||||||||||||||| |||||||||    
T  17277879 tggtaaaacttactaaaatagactgaaaaacatgctaagaataacgtaagatgacatgtcatcac 17277943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 15166505 - 15166565
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  |||| ||||||||||||||| |||||||||||||||||||    
T  15166505 taaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 15166565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 8968131 - 8968072
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 82  Q
    ||||||||||| ||| |||  |||| |||||||||||||||||||||||||| |||||||    
T  8968131 taaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 8968072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 5691789 - 5691835
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgt 66  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||    
T  5691789 tggtaaaacctactaaaattgataagaaaacatgctaagaataacgt 5691835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 19556575 - 19556541
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||||||||||||||||||    
T  19556575 acatgctaagaataacgtaagatgacctgtcatca 19556541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 11252189 - 11252128
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| |||||||||||  |  |||| ||||||||| ||||||||||||||||||||||||||    
T  11252189 taaatcctactaaaataaactgaaaaacatgctaaaaataacgtaagatgacctgtcatcac 11252128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 16669782 - 16669733
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagat 71  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||||    
T  16669782 gtaaaacctactgaaattgattgaaaaacatgctaagaataacgtcagat 16669733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 17434471 - 17434532
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| ||| |||   ||| ||||||||| ||||||||||||||||||||||||||    
T  17434471 taaaacctactgaaaatgacttaaaaacatgctaaaaataacgtaagatgacctgtcatcac 17434532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 19919203 - 19919138
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||| |||||||||||||  |  |||| |||||||||||||||||| |||||| ||||||||||    
T  19919203 ttggtagaacctactaaaataaactgaaaaacatgctaagaataacgtcagatgatctgtcatcac 19919138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 4617136 - 4617192
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||| ||  || ||| ||| ||||||||||||||||||||||||||||||||    
T  4617136 cctactaaatttactaaaaaaacaagctaagaataacgtaagatgacctgtcatcac 4617192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 17218586 - 17218626
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  17218586 gaaaaacatgctaagaataacgtaagatgacctatcatcac 17218626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 22171805 - 22171845
Alignment:
Q  43 agaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  22171805 agaaaaacatgctaagaataatgtaagatgacctgtcatca 22171845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 22350303 - 22350239
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||||||||||  |  |||| ||||||||||||||| |||||||||  |||||||||    
T  22350303 tggtaaaacctactaaaataaactgaaaaacatgctaagaataatgtaagatgatttgtcatcac 22350239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 9536815 - 9536756
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 82  Q
    ||||||||||| ||| | || |||| |||||||||||||||| ||||| |||||||||||    
T  9536815 taaaacctactgaaaataattgaaaaacatgctaagaataacataagaggacctgtcatc 9536756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 13588744 - 13588807
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    |||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||  ||||||||||    
T  13588744 gtaaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatcact 13588807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 19883581 - 19883522
Alignment:
Q  14 ctttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatga 73  Q
    |||| ||||||||||||||| ||| |||| |||| |||| |||||||| |||||||||||    
T  19883581 ctttgttggtaaaacctactgaaaatgatcgaaaaacatactaagaattacgtaagatga 19883522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 10106332 - 10106381
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatg 72  Q
    ||||||||||| ||| ||| ||||| ||||||||||||||| ||||||||    
T  10106332 taaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagatg 10106381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 17335415 - 17335354
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||| |||| ||| |||  |||| |||||| ||||||||||||||||||| |||||||||    
T  17335415 taaaacttactgaaaatgactgaaaaacatgccaagaataacgtaagatgacatgtcatcac 17335354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 22346144 - 22346177
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||||||||||||||| |||||||||    
T  22346144 atgctaagaataacgtaagatgacttgtcatcac 22346177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 11782530 - 11782590
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||| ||| |||   ||| ||||| |||||||||||||||||||||| |||||||    
T  11782530 aaaacctacttaaaatgactaaaaaacatgttaagaataacgtaagatgacctatcatcac 11782590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 15047804 - 15047864
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| |||||||  |||| |||||| ||||||||||||| ||||  ||||||||    
T  15047804 taaaacctactgaaattgactgaaaaacatgccaagaataacgtaaaatgaattgtcatca 15047864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 15106620 - 15106560
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| |||||||  |||| |||||| ||||||||||||| ||||  ||||||||    
T  15106620 taaaacctactgaaattgactgaaaaacatgccaagaataacgtaaaatgaattgtcatca 15106560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 19335257 - 19335225
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||| |||||||||    
T  19335257 atgctaagaataacgtaagatgatctgtcatca 19335225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 18535804 - 18535867
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  18535804 tggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcatca 18535867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 52935596 - 52935532
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||| |||||||    
T  52935596 tggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctatcatcac 52935532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 819907 - 819844
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    |||||||||||| |||||||  |||| |||||||||||||||||||||||||||| ||||||||    
T  819907 gtaaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacctatcatcact 819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 7805778 - 7805840
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||| |||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  7805778 gtaaaacatactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgtcatcac 7805840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 31283976 - 31283902
Alignment:
Q  10 tctactttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||| || ||||||||||||||| ||| |||| |||| ||||| |||||||||||| |||||||||||||||||    
T  31283976 tctacattgttggtaaaacctacttaaaatgattgaaaaacatgataagaataacgttagatgacctgtcatcac 31283902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 8145285 - 8145342
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtca 80  Q
    ||||||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||    
T  8145285 taaaacctactgaaattgattgaaaaacatgctaagaataatgtaagatgacctgtca 8145342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 3429287 - 3429225
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 82  Q
    ||||||||||||||||||| ||  |||| ||||| |||||||||||||||||||| |||||||    
T  3429287 tggtaaaacctactaaaatagaatgaaaaacatgataagaataacgtaagatgacatgtcatc 3429225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 20886904 - 20886965
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||| | |||  ||| |||| |||||||||||||||||||||||||||||||||||    
T  20886904 gtaaaacctattgaaaacgattgaaaaacatgctaagaataacgtaagatgacctgtcatca 20886965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 12517327 - 12517387
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  |||| | |||||||||||||||||||||||||||||||||    
T  12517327 taaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgtcatca 12517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 19912617 - 19912677
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  |||| | |||||||||||||||||||||||||||||||||    
T  19912617 taaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcatca 19912677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 18735335 - 18735300
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||||||||||||||||||||||||    
T  18735335 acatgctaagaataacgtaagatgacctgtcatcac 18735300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 20891709 - 20891642
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcacta 86  Q
    ||||||||||||||| |||  ||  |||| | ||||||||||||||||||||||||||| ||||||||    
T  20891709 ttggtaaaacctactgaaaacgactgaaaaatatgctaagaataacgtaagatgacctgccatcacta 20891642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 22470465 - 22470402
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| |||| ||| |||  |||| |||||||||||||||||||||||||| ||||||||    
T  22470465 tggtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 22470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 16242248 - 16242194
Alignment:
Q  29 ctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| |||  |||| | |||||||||||||||||||||||||||||||||    
T  16242248 ctactaaaaatgagtgaaaaatatgctaagaataacgtaagatgacctgtcatca 16242194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 13938906 - 13938845
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| |||||| |  ||  |||||||||||||||||||| |||||||||||||||    
T  13938906 taaaacctactgaaattgctttaacaacatgctaagaataacgtaaaatgacctgtcatcac 13938845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 16228377 - 16228344
Alignment:
Q  50 catgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||||||||||||||    
T  16228377 catgctaagaataacgtaagatgacctgtcatca 16228344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 34276497 - 34276436
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| ||| |||  |||| | |||||||||||||||||| |||||||||||||||    
T  34276497 taaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcatcac 34276436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 13906642 - 13906602
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataac 64  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  13906642 aaaacctactaaaattgacagaaaaacatgctaagaataac 13906602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 1096795 - 1096760
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||| |||||||||||||||||||||||||||||    
T  1096795 acatgcaaagaataacgtaagatgacctgtcatcac 1096760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 27074010 - 27074052
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcacta 86  Q
    |||| ||||||||| |||||||||||||||||| |||||||||    
T  27074010 gaaaaacatgctaaaaataacgtaagatgacctatcatcacta 27074052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 27412697 - 27412656
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    |||| ||||||||| |||||||||||||||| ||||||||||    
T  27412697 gaaaaacatgctaaaaataacgtaagatgacttgtcatcact 27412656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 27852664 - 27852603
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||| ||| |||   ||||||||||||| |||||||||||| ||| ||||||||    
T  27852664 gtaaaacctactgaaaatgactaaaagacatgctaaaaataacgtaagacgacatgtcatca 27852603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 12771241 - 12771209
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacct 76  Q
    |||| ||||||||||||||||||||||||||||    
T  12771241 gaaaaacatgctaagaataacgtaagatgacct 12771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 19170117 - 19170145
Alignment:
Q  49 acatgctaagaataacgtaagatgacctg 77  Q
    |||||||||||||||||||||||||||||    
T  19170117 acatgctaagaataacgtaagatgacctg 19170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 19533837 - 19533869
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||||| |||||||||    
T  19533837 atgctaagaataacgtaagatgatctgtcatca 19533869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 22247031 - 22247090
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtca 80  Q
    |||||||||||||| ||| |||  |||| | |||||||||||||||||||||||| |||||    
T  22247031 tggtaaaacctactgaaaatgactgaaaaa-atgctaagaataacgtaagatgacatgtca 22247090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 25851008 - 25850952
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtc 79  Q
    |||| |||||||||| | |  |||| |||||||||||||||| ||||||||||||||    
T  25851008 taaatcctactaaaaataactgaaaaacatgctaagaataacataagatgacctgtc 25850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 24263814 - 24263752
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    |||||||||||||||||||| ||  |||| |||||||||||||||||||||||||||| ||||    
T  24263814 ttggtaaaacctactaaaatagactgaaaaacatgctaagaataacgtaagatgacctatcat 24263752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 34488891 - 34488955
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||| |||||||||| |||  |||| ||||||||||||||||||||||||||||| ||||||    
T  34488891 tggtaaatcctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgccatcac 34488955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 23214864 - 23214822
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcacta 86  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  23214864 gaaaaacatgctaagaataacgtaagatgacctgtcatcacta 23214822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 25572538 - 25572477
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| |||||||  |||| ||||||||||||||||||| |||||| |||||||||    
T  25572538 taaaacctactgaaattgactgaaaaacatgctaagaataacgtaggatgacttgtcatcac 25572477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 23338928 - 23338988
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| | ||| |||| |||| |||||||||||||||| ||||||||||||||||||    
T  23338928 taaaacctaatgaaaatgattgaaaaacatgctaagaataacctaagatgacctgtcatca 23338988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 29987994 - 29988054
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||| ||||||||| |||  |||| ||||||||| |||||||||||||||||||||||||    
T  29987994 taaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcatca 29988054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 17469621 - 17469558
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| || ||| |||| |||| ||||||||||||||||||||||||  |||||||||    
T  17469621 tggtaaaacctgctgaaaatgattgaaaaacatgctaagaataacgtaagatggtctgtcatca 17469558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 17831751 - 17831791
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  17831751 gaaaaacatgctaagaataacgtaagatgacatgtcatcac 17831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 24320582 - 24320522
Alignment:
Q  23 taaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatc 82  Q
    ||||||||||| ||| ||| || ||| ||||| ||||||||||||||||||||||||||||    
T  24320582 taaaacctactgaaaatgaataaaaaaacatgttaagaataacgtaagatgacctgtcatc 24320522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 24513235 - 24513195
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  24513235 gaaaaacatgctaagaataacgtaagatgacctgtaatcac 24513195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 18939578 - 18939617
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  18939578 gaaaaacatgttaagaataacgtaagatgacctgtcatca 18939617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 20548508 - 20548453
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||  |  |||| |||||||| ||||||||||||||||||||||||||    
T  20548508 cctactaaaataaactgaaaaacatgctaggaataacgtaagatgacctgtcatca 20548453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 21352973 - 21353012
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  21352973 gaaaaacatgctaagaataacataagatgacctgtcatca 21353012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 31600109 - 31600074
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||||||||||||| |||||||||||||    
T  31600109 acatgctaagaataacgtaagaggacctgtcatcac 31600074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 19761615 - 19761581
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| |||||||||||||||||||||||||    
T  19761615 acatgctaataataacgtaagatgacctgtcatca 19761581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 20860376 - 20860437
Alignment:
Q  23 taaaacctact-aaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| |||||| || |||| ||||||||| | ||||||||||||||||||||||||    
T  20860376 taaaacctactgaaaattaat-gaaaaacatgctaacagtaacgtaagatgacctgtcatcac 20860437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 25920865 - 25920926
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    ||||||| |||||| ||| ||| | ||| | ||||||||||||||||||||||| |||||||    
T  25920865 tggtaaatcctactgaaaatgacaaaaaaatatgctaagaataacgtaagatgatctgtcat 25920926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 24162050 - 24162014
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtca 80  Q
    |||| |||||||||||||||||||| |||||||||||    
T  24162050 gaaaaacatgctaagaataacgtaaaatgacctgtca 24162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 25400798 - 25400738
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| | ||| |||  |||| |||||||||||||||||||| ||||||| ||||||    
T  25400798 taaaacctaatgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctctcatca 25400738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 26315251 - 26315283
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||||||| ||||||||    
T  26315251 atgctaagaataacgtaagatgacatgtcatca 26315283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 28766881 - 28766947
Alignment:
Q  15 tttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    ||||| ||||||||||||||||||  || |||| ||||| |||||||||||||||||||||||||||    
T  28766881 tttatgggtaaaacctactaaaatatattgaaaaacatgttaagaataacgtaagatgacctgtcat 28766947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 17891765 - 17891830
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    |||||||||||||| ||| |||  |||| ||||| |||||||||||||||||||| ||||||||||    
T  17891765 tggtaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatcact 17891830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 26313215 - 26313275
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||||||||  ||| ||||||||||||||| |||||||||| ||||||||    
T  26313215 taaaacctactgaaattgattaaaaaacatgctaagaataatgtaagatgacttgtcatca 26313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 16157143 - 16157084
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||| ||| |||  |||| ||||||||||||||| |||||||||||||||||||    
T  16157143 aaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 16157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 25537598 - 25537653
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||  |  |||| |||||||||||||||||||||||||||||||||||    
T  25537598 cctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25537653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 35680163 - 35680100
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||| ||| |||   ||| |||||||||||||||||||||||| ||||||||||    
T  35680163 tggtaaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagatggcctgtcatca 35680100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 29144698 - 29144732
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||||||||||||||||||    
T  29144698 acatgctaagaataacgtaagatgacctgtcatca 29144732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 25882629 - 25882568
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||||||||  ||||| |||||    
T  25882629 aaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagatggtctgtcttcact 25882568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 25886251 - 25886190
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||| | ||| ||| ||||| ||||| ||| ||||||||||||||||||||||||||    
T  25886251 taaaacctaatgaaaatgacagaaaaacatgataaaaataacgtaagatgacctgtcatcac 25886190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 32130760 - 32130699
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||| |||||||| |||  || | |||| ||||||||||||||||||||||||||||||    
T  32130760 gtaaaacttactaaaaatgactgataaacatactaagaataacgtaagatgacctgtcatca 32130699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 32137973 - 32137912
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||| |||  || | ||||  |||||||||||||||||||||||||||||    
T  32137973 gtaaaacctactaaaaatgactgataaacataataagaataacgtaagatgacctgtcatca 32137912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 32139395 - 32139334
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| |||||| |||  || | |||| ||||||||||||||||||||||||||||||    
T  32139395 gtaaaacctgctaaaaatgactgataaacatactaagaataacgtaagatgacctgtcatca 32139334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 18553318 - 18553386
Alignment:
Q  15 tttattggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||| |||||| | | |||| |||||||| |||||| |||||||||||||| ||||    
T  18553318 tttactggtaaaacctattaaaataggttgaaaaacatgctaggaataatgtaagatgacctgtaatca 18553386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45572429 - 45572365
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45572429 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45572365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45576096 - 45576032
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45576096 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45576032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45579763 - 45579699
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45579763 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45579699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45583430 - 45583366
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45583430 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45583366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45587097 - 45587033
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45587097 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45590764 - 45590700
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45590764 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45590700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45594431 - 45594367
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45594431 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45594367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45598098 - 45598034
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45598098 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45598034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45601765 - 45601701
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45601765 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45601701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45605432 - 45605368
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45605432 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45605368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45609099 - 45609035
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45609099 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45609035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45612766 - 45612702
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45612766 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45612702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 45616433 - 45616369
Alignment:
Q  20 tggtaaaacctactaaaattga-tagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||  ||||||| || ||| ||||||||||| |||||||||||||| ||||||||    
T  45616433 tggtaaaacctaccgaaattgactaaaaaaacatgctaagattaacgtaagatgacatgtcatca 45616369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 21905784 - 21905823
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  21905784 gaaaaacatgctaagaataacataagatgacctgtcatca 21905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 23010106 - 23010043
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||| | ||| |||  |||| |||||||||||||||||||||||||| ||| ||||    
T  23010106 tggtaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagatgacttgttatca 23010043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 18120600 - 18120546
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatc 82  Q
    |||||||||||  |  |||| |||||||||||||||||||||||||| |||||||    
T  18120600 cctactaaaataaactgaaaaacatgctaagaataacgtaagatgacatgtcatc 18120546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 22569091 - 22569149
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    ||||||||||| |||||||  |||| ||||| |||||||||| ||||||||||| ||||    
T  22569091 taaaacctactgaaattgactgaaaaacatggtaagaataacataagatgacctttcat 22569149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 25922649 - 25922703
Alignment:
Q  30 tactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||  || |||| ||||||||| ||||||||||||| ||||||||||||    
T  25922649 tactaaaataaattgaaaaacatgctaaaaataacgtaagataacctgtcatcac 25922703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 32087084 - 32087146
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||||| ||   ||| | ||||||| |||||||||||||||| |||||||||    
T  32087084 gtaaaacctactaaaatagactaaaaaatatgctaataataacgtaagatgacatgtcatcac 32087146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 34574577 - 34574611
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||||||||||||| ||||    
T  34574577 acatgctaagaataacgtaagatgacctgtaatca 34574611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 28918225 - 28918286
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| ||| |||  |||| |||||||||||||||||||| ||||  |||||||||    
T  28918225 taaaacctactgaaaatgactgaaaaacatgctaagaataacgtaaaatgatttgtcatcac 28918286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 24086366 - 24086310
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtc 79  Q
    |||| |||||||||||  |  |||| ||||||||||||||||||||| |||||||||    
T  24086366 taaatcctactaaaataaactgaaaaacatgctaagaataacgtaagttgacctgtc 24086310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 29851053 - 29851109
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtc 79  Q
    |||||||||||||||| ||| |||| ||||| |||||||||  | ||||||||||||    
T  29851053 taaaacctactaaaatcgattgaaaaacatgttaagaataattttagatgacctgtc 29851109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 9783041 - 9782979
Alignment:
Q  21 ggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||| ||| |||| ||||||||| ||||||||||||||| |||||||||    
T  9783041 ggtaaaacctactaaaatagattgaaaaacatgctaataataacgtaagatgatctgtcatca 9782979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 14782567 - 14782627
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| | |||||||  |||| |||||||||||||||||||||||||||||||||||    
T  14782567 taaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacctgtcatca 14782627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 21663150 - 21663090
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  |||| |||||||||||||||||||||||||||||||||||    
T  21663150 taaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatca 21663090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 26611391 - 26611331
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||| ||| || |||| |||||||||||||||||||||||||||||||||||    
T  26611391 taaatcctactaatattaattgaaaaacatgctaagaataacgtaagatgacctgtcatca 26611331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 33192386 - 33192449
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||| |||||||  |||| |||||||||||||| ||||||||||| ||||||||    
T  33192386 tggtaaaacctactgaaattgactgaaaaacatgctaagaatagcgtaagatgacttgtcatca 33192449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 12210302 - 12210363
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||| |||||||  |||| ||||||||||||||| |||||||||||| |||||||    
T  12210302 taaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgacctatcatcac 12210363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 15571749 - 15571688
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||  |||| ||||||||| ||||||||||||||| || ||||||    
T  15571749 gtaaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagatgatctatcatca 15571688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 26647421 - 26647356
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||| |||  ||  |||| | ||||||||||||||||||||||||||||||||||    
T  26647421 ttggtaaaacctactgaaaaagactgaaaaatatgctaagaataacgtaagatgacctgtcatcac 26647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 27116286 - 27116223
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||| |||| |||| ||||| |||||| ||||||||||||| | ||||||    
T  27116286 tggtaaaacctactaaaaatgattgaaaaacatgttaagaaaaacgtaagatgacatttcatca 27116223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 22621832 - 22621890
Alignment:
Q  25 aaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||| |||  |||| ||||||||||||| ||||||||| |||||||||||    
T  22621832 aaacctactaaaaatgactgaaaaacatgctaagaattacgtaagataacctgtcatca 22621890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 15542368 - 15542303
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcactacc 88  Q
    ||||||||||| ||| |||  |||| ||||| |||||||||||||||||||| |||||||| ||||    
T  15542368 taaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatcattacc 15542303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 18098311 - 18098246
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    ||||||||||||||||| | ||| |||| |||  |||| ||||||||||||| |||||||||||||    
T  18098311 tggtaaaacctactaaattagattgaaaaacagtctaaaaataacgtaagataacctgtcatcact 18098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 25402495 - 25402434
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| |||||||||||  |  |||| ||||||||||||||||| ||||||||||||||||||    
T  25402495 taaatcctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgtcatcac 25402434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 729173 - 729233
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  ||||  ||||||||||||||||||||||||||| ||||||    
T  729173 taaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctttcatca 729233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 11845281 - 11845221
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||| | |  |||| | ||||||||||||||||||||||| |||||||||    
T  11845281 taaaacctactaaaaataactgaaaaatatgctaagaataacgtaagatgatctgtcatca 11845221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 16114834 - 16114898
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||| | || ||| |||| |||| ||||||||||||||||||||||| | ||||||||||    
T  16114834 tggtaaaacatgctgaaaatgattgaaaaacatgctaagaataacgtaagataatctgtcatcac 16114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 18734624 - 18734584
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  18734624 gaaaaacatgctaagaataacgtaagataacctgtcatcac 18734584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 35133917 - 35133981
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||  ||  |||| ||||||||   ||||||||||||||||||||||||    
T  35133917 ttggtaaaacctactaaaaaagactgaaaaacatgctacagataacgtaagatgacctgtcatca 35133981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 14235343 - 14235284
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||| |||  |||| ||||||||||| |||||||||||||| || |||||    
T  14235343 aaaacctactaaaaatgactgaaaaacatgctaagagtaacgtaagatgacatgccatca 14235284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 22426570 - 22426515
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||  |  |||| ||||||||||||| |||||||||||||||||||||    
T  22426570 cctactaaaataaactgaaaaacatgctaagaatgacgtaagatgacctgtcatca 22426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 22626217 - 22626158
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtc 79  Q
    |||||||| |||||||||   ||  ||| |||||||||||||||||||||||||||||||    
T  22626217 tggtaaaagctactaaaaaaaattcaaaaacatgctaagaataacgtaagatgacctgtc 22626158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 24464672 - 24464711
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  24464672 gaaaaacatgctaagaataacgtaagatgacatgtcatca 24464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 26022443 - 26022480
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  26022443 gaaaaacatgctaagaataacgtaagatcacctgtcat 26022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 15158827 - 15158787
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||||||||  ||||||||||||||    
T  15158827 gaaaaacatgctaagaataacgtaatttgacctgtcatcac 15158787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 18527528 - 18527496
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||||||| ||||||||    
T  18527528 atgctaagaataacgtaagatgacttgtcatca 18527496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 18827454 - 18827494
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||| ||||||||||||||||||||| ||||||||    
T  18827454 gaaaaacatgttaagaataacgtaagatgaccagtcatcac 18827494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 22665822 - 22665886
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcacta 86  Q
    ||||||| |||||||||  |  |||| ||||||||||||||||| |||||| | |||||||||||    
T  22665822 gtaaaacatactaaaataaactgaaaaacatgctaagaataacggaagatgtcatgtcatcacta 22665886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 27912122 - 27912162
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  27912122 gaaaaacatgttaagaataacgtaagatgacatgtcatcac 27912162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 27973340 - 27973388
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagat 71  Q
    ||||||||||| ||| |||  |||| |||||||||||||||||||||||    
T  27973340 taaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagat 27973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 21707400 - 21707339
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    |||||||||||||||||| |||| |||| | |||||||||||||||||||||||| ||||||    
T  21707400 tggtaaaacctactaaaaatgattgaaaaatatgctaagaataacgtaagatgacgtgtcat 21707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 13280796 - 13280856
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||||| || |||| |||||||||||||||||||||||||| ||||||||    
T  13280796 taaaacctactgaaattaattgaaaaacatgctaagaataacgtaagatgacatgtcatca 13280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 2927911 - 2927971
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||  |  |||| |||||||||||||||||||||||||||||||||||    
T  2927911 taaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 2927971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 3585582 - 3585522
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||| |||| ||||||||||||||| |||||||||| ||||||||    
T  3585582 taaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagatgacttgtcatca 3585522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 10585251 - 10585187
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||  | | ||| | |||||||||||| ||||||||||||||||||||    
T  10585251 ttggtaaaacctactaaaataaacataaaaatatgctaagaatagcgtaagatgacctgtcatca 10585187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 14195782 - 14195842
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtca 80  Q
    |||||||||||||||||| |||  |||| |||||||||||||||| |||||| ||||||||    
T  14195782 tggtaaaacctactaaaaatgactgaaaaacatgctaagaataacataagatcacctgtca 14195842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 19154876 - 19154916
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  19154876 gaaaaacatgctaagaataacgtaagatgacctgtcatcac 19154916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 20754275 - 20754315
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  20754275 gaaaaacatgctaagaataacgtaagatgacctgtcatcac 20754315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 23127957 - 23127893
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||||||| ||  |||| | ||||||| |||||||||||||||||| |||||||    
T  23127957 tggtaaaacctactaaaatagactgaaatatatgctaaaaataacgtaagatgacctatcatcac 23127893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 26249135 - 26249075
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  |||| |||||||| ||||||||||||||||||||||||||    
T  26249135 taaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgtcatca 26249075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 1767410 - 1767473
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||| |||||| |||||| ||  |||| | |||||||||||||||||||||||||||||||||    
T  1767410 tggtataacctattaaaatagactgaaaaatatgctaagaataacgtaagatgacctgtcatca 1767473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 9767819 - 9767882
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||| ||| ||   |||| |||||||||||||||||| ||||||||||||||||    
T  9767819 tggtaaaacctactgaaaatggctgaaaaacatgctaagaataacgtgagatgacctgtcatca 9767882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 23897274 - 23897337
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| ||||||||||||  |||| ||||| ||||||||| |||||||||| ||||||||    
T  23897274 tggtaaaacatactaaaattgactgaaaaacatgttaagaataatgtaagatgacatgtcatca 23897337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 10332440 - 10332502
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||| |||| ||| |||  |||| |||||||||||||||||||||||||| |||||||||    
T  10332440 gtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatcac 10332502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 18468400 - 18468338
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||| ||||||||||||  |||| ||||| |||||||||||||||||| ||||| |||||    
T  18468400 gtaaaacttactaaaattgactgaaaaacatgttaagaataacgtaagatggcctgtaatcac 18468338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 18986804 - 18986743
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||| ||||| |||||||  |||| |||||||||||||||||||||||||  |||||||||    
T  18986804 taaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatcac 18986743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 19001432 - 19001371
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||| ||||| |||||||  |||| |||||||||||||||||||||||||  |||||||||    
T  19001432 taaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatcac 19001371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 2506859 - 2506819
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  2506859 gaaaaacatgctgagaataacgtaagatgacctgtcatcac 2506819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 3736370 - 3736426
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacct 76  Q
    |||||||||||||| |||| ||   ||| ||||||||||||||||||||||||||||    
T  3736370 tggtaaaacctactgaaatagactaaaaaacatgctaagaataacgtaagatgacct 3736426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 4450708 - 4450768
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||| ||| |||  | || ||||||||||||||||||||||||| |||||||||    
T  4450708 taaaacctactgaaaatgactggaaaacatgctaagaataacgtaagatgatctgtcatca 4450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 6018391 - 6018455
Alignment:
Q  19 ttggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||||| ||  |||| ||||||||| |||||| ||||||||| | ||||||    
T  6018391 ttggtaaaacctactaaaatcgactgaaaaacatgctaaaaataacataagatgacatatcatca 6018455  T

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Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 13252746 - 13252706
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  13252746 gaaaaacatgctaagaataacgtaagatgacctgccatcac 13252706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 19201361 - 19201321
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| ||||||||||||||||||||||||| ||||||||||    
T  19201361 gaaaaacatgctaagaataacgtaagatgatctgtcatcac 19201321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 23173745 - 23173685
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| ||||| | |  |||| |||||||||||||||||||||||||| ||||||||    
T  23173745 taaaacctattaaaaataactgaaaaacatgctaagaataacgtaagatgacatgtcatca 23173685  T

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Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 2565944 - 2566003
Alignment:
Q  24 aaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||| ||| |||  |||| |||||||||||||| ||||||||||| ||||||||    
T  2565944 aaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagatgacttgtcatca 2566003  T

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Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 8977530 - 8977479
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgac 74  Q
    ||||||||||| ||| |||| |||| | ||||||||||||||||||||||||    
T  8977530 taaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagatgac 8977479  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 9078915 - 9078880
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||||||||||||||||| |||||||||    
T  9078915 acatgctaagaataacgtaagatgacatgtcatcac 9078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 9722477 - 9722540
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    |||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||  ||||||||||    
T  9722477 gtaaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatcact 9722540  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 10414318 - 10414279
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  10414318 gaaaaacatgctaagaataatgtaagatgacctgtcatca 10414279  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 4994790 - 4994824
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||| |||||||||||||||||||||||||    
T  4994790 acatgctaaaaataacgtaagatgacctgtcatca 4994824  T

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Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 8052488 - 8052427
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    ||||||||||| ||| |||  |||| |||||||||||||||||||||||||  ||||||||||    
T  8052488 taaaacctactgaaaatgactgaaa-acatgctaagaataacgtaagatgatttgtcatcact 8052427  T

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Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 11804735 - 11804797
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcact 85  Q
    ||||||||||| ||| |||  |||| ||||| || |||||||||||||||| |||||||||||    
T  11804735 taaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagatgatctgtcatcact 11804797  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 1810940 - 1811001
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||| |||| ||| |||  |||| |||||||| ||||||||||||||||| ||||||||    
T  1810940 gtaaaacttacttaaaatgactgaaaaacatgctacgaataacgtaagatgacatgtcatca 1811001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 3692823 - 3692762
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcat 81  Q
    |||||||||||||  ||| |||  |||| | |||||| ||||||||||||||||||||||||    
T  3692823 tggtaaaacctacagaaaatgaatgaaaaatatgctatgaataacgtaagatgacctgtcat 3692762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 9288944 - 9288997
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatga 73  Q
    |||||||||||||| |||||||  |||| |||||| |||||||| |||||||||    
T  9288944 tggtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaagatga 9288997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 9298736 - 9298789
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatga 73  Q
    |||||||||||||| |||||||  |||| |||||| |||||||| |||||||||    
T  9298736 tggtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaagatga 9298789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 19201515 - 19201556
Alignment:
Q  43 agaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||| ||||| |||||||||| |||||||||||||||||||    
T  19201515 agaaaaacatgttaagaataacataagatgacctgtcatcac 19201556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 39270332 - 39270272
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||| |||||||| |||  |||| ||||||||||| |||||||||||||| |||||||||    
T  39270332 taaaacttactaaaaatgactgaaaaacatgctaaga-taacgtaagatgacatgtcatcac 39270272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 13287765 - 13287709
Alignment:
Q  28 cctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||||||||||  |  |||| ||||| |||||||||||||||||||| |||||||||    
T  13287765 cctactaaaataaactgaaaaacatgttaagaataacgtaagatgacttgtcatcac 13287709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 17887762 - 17887730
Alignment:
Q  51 atgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||| |||||||||||||||    
T  17887762 atgctaagaataacgtaggatgacctgtcatca 17887730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 20577557 - 20577589
Alignment:
Q  52 tgctaagaataacgtaagatgacctgtcatcac 84  Q
    ||||||||||||||||||||||| |||||||||    
T  20577557 tgctaagaataacgtaagatgacatgtcatcac 20577589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 12266 - 12327
Alignment:
Q  22 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    ||||||||||||||||||||| |||| |||||||||||||||||  ||||||  ||||||||    
T  12266 gtaaaacctactaaaattgattgaaaaacatgctaagaataacgctagatgaaatgtcatca 12327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 20291 - 20252
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  20291 gaaaaacatgctaagaataacgtaagatgacttgtcatca 20252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 41373 - 41435
Alignment:
Q  20 tggtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||||||||||||| | |  |||| |||||||||||||||| |||||||| |||||||||    
T  41373 tggtaaaacctactaaaaataactgaaaaacatgctaagaataac-taagatgagctgtcatca 41435  T

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Target: scaffold0871 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 82
Target Start/End: Original strand, 4021 - 4054
Alignment:
Q  49 acatgctaagaataacgtaagatgacctgtcatc 82  Q
    |||||||||||||||||||||| |||||||||||    
T  4021 acatgctaagaataacgtaagaggacctgtcatc 4054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 192186 - 192219
Alignment:
Q  50 catgctaagaataacgtaagatgacctgtcatca 83  Q
    |||||||| |||||||||||||||||||||||||    
T  192186 catgctaaaaataacgtaagatgacctgtcatca 192219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 23094 - 23134
Alignment:
Q  44 gaaagacatgctaagaataacgtaagatgacctgtcatcac 84  Q
    |||| |||||||||||||| | |||||||||||||||||||    
T  23094 gaaatacatgctaagaatagcataagatgacctgtcatcac 23134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 92888 - 92828
Alignment:
Q  23 taaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgtcatca 83  Q
    |||| |||||||||| | |  |||| ||||||||||||||||||||||| || ||||||||    
T  92888 taaaccctactaaaaataactgaaaaacatgctaagaataacgtaagataacttgtcatca 92828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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