View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6950_high_16 (Length: 241)
Name: NF6950_high_16
Description: NF6950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6950_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 14680867 - 14681078
Alignment:
| Q |
19 |
agaataactaaaactgtctcctatttatccattgaacatgtcaattttggttttcaatataaaacttcaaatcatgcaattacatcattgagttcgtact |
118 |
Q |
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| T |
14680867 |
agaataactaaaactgtctcctatttatccattgaacatgtcaattttggttttcaatataaaacttcaaatcatgcaattacatcattgagtttgtact |
14680966 |
T |
|
| Q |
119 |
atctaaaaacaagttgtacactgtaaatcttaaacttgactaatagtacaatatcgagctacattggctgaaatctgtaatcgcatgtatattgtgtgtt |
218 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
14680967 |
atctaaaaacaagttgtacactttaaatcttaaacttgactaatagtacaatatcgagctacattggctgaaatctgtaatcgcatgtatatcgtgtgtt |
14681066 |
T |
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| Q |
219 |
ctgtgttttctt |
230 |
Q |
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|||||||||||| |
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| T |
14681067 |
ctgtgttttctt |
14681078 |
T |
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