View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6950_low_21 (Length: 222)
Name: NF6950_low_21
Description: NF6950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6950_low_21 |
 | |
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| [»] scaffold0001 (2 HSPs) |
| |
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| [»] scaffold0656 (1 HSPs) |
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| [»] chr1 (4 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] chr2 (7 HSPs) |
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| [»] chr4 (4 HSPs) |
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| [»] chr8 (4 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] chr6 (5 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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| [»] scaffold0013 (2 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] chr3 (6 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
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| [»] chr7 (5 HSPs) |
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| [»] scaffold0304 (1 HSPs) |
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| [»] scaffold0100 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
| | |
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| [»] scaffold0897 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0037 (1 HSPs) |
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| [»] scaffold0093 (1 HSPs) |
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| [»] scaffold0401 (1 HSPs) |
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| [»] scaffold0066 (1 HSPs) |
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| [»] scaffold0757 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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Alignment Details
Target: scaffold0001 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 93678 - 93457
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
93678 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
93579 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||||| || |||||||||||||||||| ||||||| |
|
|
| T |
93578 |
ctaggatgatatcttgtttcagcgtcattaagtaccctacttagataatatatggctttttctgtgccatttttatcctcttgtgccaacattctgccta |
93479 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
93478 |
tagttccatctgatgctgctat |
93457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 124349 - 124569
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| || ||||| |||| |
|
|
| T |
124349 |
ttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacaaaaacaaagtttatcac |
124448 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||| |||||| |||||||||| || ||||| ||||||| ||||||||||| ||||||||| ||||| || ||||| |
|
|
| T |
124449 |
taggatgatatcttgtttcaacatcattaagtaccatacttagatagtaaatggccctttctgtgccatattcattctcttgtgctaacatacttcctat |
124548 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| |||||||| |
|
|
| T |
124549 |
ggtgccatctgacgctgctat |
124569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7669 - 7448
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7669 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
7570 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||| || |||||||||||||||||| ||||||| |
|
|
| T |
7569 |
ctatgatgatatcttgtttcagcatcattgagtaccctacttagataatatatggctttttctgtgccatttttatcctcttgtgccaacattctgccta |
7470 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
7469 |
tagttccatctgatgctgctat |
7448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 21296578 - 21296357
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| ||||||| |
|
|
| T |
21296578 |
tttaataatatcaaaacgggaataaacataaacatcaaaaggctttgtataatgcttaagttttgtacatgataaatataagcaaaggcataatttttca |
21296479 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21296478 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcatcttgtgccaacatgctgccta |
21296379 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||||| |||||| |
|
|
| T |
21296378 |
tagtgccatctgatgttgctat |
21296357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 22691798 - 22692019
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| |
|
|
| T |
22691798 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaaatacaagcaaaggcataatttttca |
22691897 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
22691898 |
ctatgatgatatcttgtttcagcgtcattgagtatcctacttaggtaataaatggctctttctgcaccattttcatcctcttgtgccaacatgctgccta |
22691997 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| ||||||||||| ||||| |
|
|
| T |
22691998 |
tagtgccatctgatgccgctat |
22692019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 22802356 - 22802577
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
22802356 |
tttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataagcaaagacatagtttttca |
22802455 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||| |||||||||||||| | ||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||||| |
|
|
| T |
22802456 |
ctaggacgatatcttgtttcaacatcattaagtaccctacttagataataaatggccctttctgtgccatattcatcctcttgtgataacatactgccta |
22802555 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||| |||||||| |
|
|
| T |
22802556 |
tagtgccatctgacgctgctat |
22802577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 41377963 - 41378184
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || | || || |||||| |
|
|
| T |
41377963 |
tttaatgatatcaaaatgagaatacacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagcttttca |
41378062 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||| | ||||| |||||| ||||| ||| || ||||||||||||||||||||| |||||||| || | |
|
|
| T |
41378063 |
ctaggatggtatcttgtttcagcatcattaagtactcgacttaaataataaatggccttttatgtgccatattcatcctcttgtgctaacatgcttccga |
41378162 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
| || |||||||| | |||||| |
|
|
| T |
41378163 |
tggtgccatctgacgttgctat |
41378184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 136619 - 136840
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
136619 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
136718 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
136719 |
ctaggatgatatcttgtttcaacatcattgagtaccctacttagataataaatggccctttctatgccatattcatcctcttgtgctaacatactgccta |
136818 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||| |||||||| |
|
|
| T |
136819 |
tagtgccatctgacgctgctat |
136840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24916311 - 24916090
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24916311 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgtttaagttttgtacatgaaaagtataagcaaaggcatagtttttca |
24916212 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||||| |||| || |
|
|
| T |
24916211 |
ctaggatgatatcttgtttcaacatcattgagtaccctacttagataataaatggccttttttgtgccatattcatcctcttgtgccaacatactgcata |
24916112 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||| |||||||| |
|
|
| T |
24916111 |
tagtgccatctgacgctgctat |
24916090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 23811565 - 23811767
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||||| |||| ||||||| |
|
|
| T |
23811565 |
ttaattatatcaaaatgagaataaacataaacatcaaaagactttatataatgcttaagttttgtacatgagaaatacaaacaaagacataacttttcac |
23811664 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||||| ||||| | ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| ||| ||||| |
|
|
| T |
23811665 |
taggatgatatcttgtttcagcatcatttaataccctactaagataataaatggctctttctgcgccattttcatcctcttgtgctaacacgcttcctat |
23811764 |
T |
|
| Q |
202 |
agt |
204 |
Q |
| |
|
||| |
|
|
| T |
23811765 |
agt |
23811767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 23198419 - 23198639
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
23198419 |
ttaatgatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttcac |
23198518 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||| | ||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
23198519 |
taggatgatatcttgtttccacatcattaagtactcgacttaaataataaatggccctttctgtgccatattcatcctcttgtgctaacatacttcctat |
23198618 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| | |||||| |
|
|
| T |
23198619 |
ggtgccatctgacgttgctat |
23198639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 22640932 - 22640712
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
22640932 |
ttaatgatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttcac |
22640833 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||| | ||||| |||||| || || ||||||| ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
22640832 |
taggatgatatcttgtttccacatcattaagtactcgacttaaataataaatagccctttctgtgccatattcatcctcttgtgctaacatacttcctat |
22640733 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||| ||| | |||||| |
|
|
| T |
22640732 |
ggtgccatttgacgttgctat |
22640712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 23616962 - 23617018
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgctta |
58 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
23616962 |
ttaatgatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgctta |
23617018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 25113814 - 25113896
Alignment:
| Q |
104 |
ggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgc |
186 |
Q |
| |
|
|||||||||||||||||||| ||||| | |||||||| ||||| || |||||||||||| ||||| |||||| |||||||| |
|
|
| T |
25113814 |
ggatgatatcttgtttcagcatcatttaaaaccctactaagatagtaaatggctctttctatgccattttcatcttcttgtgc |
25113896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 25113752 - 25113794
Alignment:
| Q |
21 |
aataaacataaacatcaaaaggctttatataatgcttaagttt |
63 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
25113752 |
aataaacataaacatcaataggctttatatattgcttaagttt |
25113794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 166; Significance: 5e-89; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 14744542 - 14744763
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
14744542 |
tttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataagcaaagacatagtttttca |
14744641 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||| |
|
|
| T |
14744642 |
ctaggatgatatcttgtttgaacatcattgagtaccctacttagataataaatggctctttctgtgccatattcatcctcttgtgataacatactgccta |
14744741 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||| ||||||| |
|
|
| T |
14744742 |
tagtgccatctgactctgctat |
14744763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 13286942 - 13287162
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| | ||||| | || |||||||||| |
|
|
| T |
13286942 |
ttaatgatatcaaaatgggagtaaacataaacgtcaaaaggttttatataatgcttaagttttgtacatgagaagaacaagcacaaacaaagtttttcac |
13287041 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||| ||||| |||||| ||||| ||||||| |||||||||||| |||||||| ||||| || ||||| |
|
|
| T |
13287042 |
taggatgatatcttgtttcaacatcattaagtacccgacttaaataataaatggccctttctgtgccatattcatcttcttgtgctaacatacttcctat |
13287141 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| | |||||| |
|
|
| T |
13287142 |
ggtgccatctgacgttgctat |
13287162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 18560127 - 18560330
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || || ||||| |||| |||||| |
|
|
| T |
18560127 |
tttaattatatcaaaatgagaataaacataaacatcaaacgactttatataatgcttaagttttgtacatgagaaatacaaacaaagacataacttttca |
18560226 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||| | ||||||||| |||||||||| ||||| |||| |||||| |||||||||||||| |||||||| |||| |
|
|
| T |
18560227 |
ctaggatgatatcttgtttcagaatcatttaataccctactaagataatagaaggctccttctacgccattttcatcctcttgtgttaacatgcttccta |
18560326 |
T |
|
| Q |
201 |
tagt |
204 |
Q |
| |
|
|||| |
|
|
| T |
18560327 |
tagt |
18560330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 15151472 - 15151692
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
15151472 |
ttaataatatcaaaatgagaataaacatagacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttcac |
15151571 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
||||||||||||| |||||| | ||||| ||||| | ||||| ||| |||||||| ||||| | ||||| ||||||||||||||| ||||| || ||||| |
|
|
| T |
15151572 |
taggatgatatctcgtttcaacatcattaagtacacgacttaaatagtagatggccctttccgtgccatgttcatcctcttgtgctaacatacttcctat |
15151671 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| | |||||| |
|
|
| T |
15151672 |
ggtaccatctgacgttgctat |
15151692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 22346331 - 22346551
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
22346331 |
ttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataagcaaagacaaagtttttcac |
22346430 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
22346431 |
taggatgatatcttgtttcaacatcattgagtaccctacttagatagtaaatggccctttctgtgccatattcatcctcttgtgctaacatacttcctat |
22346530 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
22346531 |
agtgccatctgacgctgctat |
22346551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 22341148 - 22341368
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
22341148 |
ttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataagcaaagacatagtttttcac |
22341247 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| |||| ||| || ||||| ||||||| ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
22341248 |
taggatgatatcttgtttcaacatcattgagtacccttcttatatattaaatggccctttctgtgccatattcatcctcttgtgctaacatacttcctat |
22341347 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
22341348 |
agtgccatctgacgctgctat |
22341368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 33 - 215
Target Start/End: Complemental strand, 22173081 - 22172900
Alignment:
| Q |
33 |
catcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgatatcttgtttcagcgtcattgag |
132 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||| |||| |||| |||||||||||||||| |||||||||||| |
|
|
| T |
22173081 |
catcaaaaggctttaaataatgcttaagttttgtacatgagaaatatgatcaaaggcataatttt-cacttggatgatatcttgttttagcgtcattgag |
22172983 |
T |
|
| Q |
133 |
taccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctatagttccatctgatg |
215 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22172982 |
taccttacttagataataaatggctctttctgcgccatactcatcctcttgtgccaacatgctgcctatagtgccatctgatg |
22172900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 22711430 - 22711360
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatga |
72 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| | |||| ||||||||| ||||||||||| | |||||| |
|
|
| T |
22711430 |
ttaataacatcaaaatgcaaataaacataaacaactaaagactttatatattgcttaagtttagaacatga |
22711360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 14082 - 13862
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
14082 |
ttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataagcaaagacaaagtttttcac |
13983 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||| ||| || ||||| ||||||| ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
13982 |
taggatgatatcttgtttcaacatcattgagtaccctacttaaatagtaaatggccctttctgtgccatattcatcctcttgtgctaacatacttcctat |
13883 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
13882 |
agtgccatctgacgctgctat |
13862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16212869 - 16212646
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
16212869 |
tttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaaattttgtacatgagaagaataagcaaagacatagtttttca |
16212770 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccc--tacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcc |
198 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||| |
|
|
| T |
16212769 |
ctaggatgatatcttgtttcaacatcattgagtaccctatacttagataataaatggccctttctgtgccatattcatcctcttgtgataacatactgcc |
16212670 |
T |
|
| Q |
199 |
tatagttccatctgatgctgctat |
222 |
Q |
| |
|
|||||| |||||||| |||||||| |
|
|
| T |
16212669 |
tatagtgccatctgacgctgctat |
16212646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 19032745 - 19032965
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| || || |||||||||| |
|
|
| T |
19032745 |
ttaatgatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttatgttttgtacatgagaagaataagcacagacaaagtttttcac |
19032844 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | |||| | | || | ||||| |||||| ||||||||||||| ||||| ||| ||||||||||| ||||| || ||||| |
|
|
| T |
19032845 |
taggatgatatcttgtttcaacatcatcgcgcacacgacttaaataataaatggctctttctgtgccatgttcgtcctcttgtgctaacatacttcctat |
19032944 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| | |||||| |
|
|
| T |
19032945 |
ggtgccatctgacgttgctat |
19032965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 13779815 - 13779671
Alignment:
| Q |
11 |
tcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgat |
110 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||| ||||| || || |||||||| | ||| ||||| ||||| |
|
|
| T |
13779815 |
tcaaaatgagaataaacataaacatcaataggctttatatattgcttaagtttgatacaagagaaatacaaacaaaggcacaatttctcacttggatggc |
13779716 |
T |
|
| Q |
111 |
atcttgtttcagcgtcattgagtaccctacttagataatagatgg |
155 |
Q |
| |
|
| ||||| || | ||||| | |||||||| ||||||||||||| |
|
|
| T |
13779715 |
accttgtctcgacatcatttaaaaccctactaagataatagatgg |
13779671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 20190538 - 20190682
Alignment:
| Q |
11 |
tcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgat |
110 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||| || |||||||| |||| ||||| || || | ||||||| |||||||| | ||| | |
|
|
| T |
20190538 |
tcaaaatgagaataaacataaacatcaataggctttatatattgtttaagtttgatacaagagaaatacaaatacaggcataacttttcacttgaatggt |
20190637 |
T |
|
| Q |
111 |
atcttgtttcagcgtcattgagtaccctacttagataatagatgg |
155 |
Q |
| |
|
| || ||| |||| ||||| | |||||||| |||||||| |||| |
|
|
| T |
20190638 |
acctagttgcagcatcatttaaaaccctactaagataatatatgg |
20190682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 22145453 - 22145309
Alignment:
| Q |
11 |
tcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgat |
110 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||| || |||||||| |||| ||||| || || | ||||||| |||||||| | ||| | |
|
|
| T |
22145453 |
tcaaaatgagaataaacataaacatcaataggctttatatattgtttaagtttgatacaagagaaatacaaatacaggcataacttttcacttgaatggt |
22145354 |
T |
|
| Q |
111 |
atcttgtttcagcgtcattgagtaccctacttagataatagatgg |
155 |
Q |
| |
|
| || ||| |||| ||||| | |||||||| |||||||| |||| |
|
|
| T |
22145353 |
acctagttgcagcatcatttaaaaccctactaagataatatatgg |
22145309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 39855 - 40064
Alignment:
| Q |
4 |
aataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcacta |
103 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
39855 |
aataatatcgaaatgggaaaaaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaaatataagcaaaggcataatttttcacta |
39954 |
T |
|
| Q |
104 |
ggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctatag |
203 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||| | |||||| ||||||||||||||||| ||||||| |||||| ||||||||||| ||||||| |
|
|
| T |
39955 |
ggatgatatcttgtttcagcatcattgagtactctactaaaataataaatggctctttctgcgccgtattcattctcttgcgccaacatgctacctatag |
40054 |
T |
|
| Q |
204 |
ttccatctga |
213 |
Q |
| |
|
| | |||||| |
|
|
| T |
40055 |
tgcaatctga |
40064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 6762 - 6542
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
6762 |
tttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttgagttttgtacatgagaagtataagcaaaggcaca-attttca |
6664 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||||||||| |||||| | |||||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||| |||||||| ||||||| |
|
|
| T |
6663 |
ctaggatgatatctggtttcaacatcattgagtaccctacttagataataaatggccttttctgtgccatgttcatcctcttgcgccaacatactgccta |
6564 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||| ||| ||| |||| |
|
|
| T |
6563 |
tagtgccatatgacgcttctat |
6542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 112084 - 111863
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| |
|
|
| T |
112084 |
tttaataatattgaaatgagaataaacataaacatcaaaagactttatataatgcttaagttttgtacatgagaaatacaagcaaaggcataatttttca |
111985 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||| |||||||| ||||||||| |||||||| ||||| |||| |
|
|
| T |
111984 |
ctaggatgatatctcgtttcagcatcatttagtactctactaagataatagatggctctttttgcgccattttcatcctcctgtgccaatatgctcccta |
111885 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| | |||||| | |||||| |
|
|
| T |
111884 |
tagtgcaatctgaggttgctat |
111863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 151477 - 151256
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| |||||| |
|
|
| T |
151477 |
tttaataatattgaaatgagaataaacataaacatcaaaaggctttatataatgcttaagttttatacatgagaaatacaagcaaaggcataatttttcg |
151378 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||| ||||||||| |||||||| ||||| |||| ||||| ||||||||||||||||||| |||||||| ||||||||| |||||||| ||||| |||| |
|
|
| T |
151377 |
ctagtatgatatctcgtttcagcatcatttagtattctactaagataatagatggctctttttgcgccattttcatcctcctgtgccaatatgctcccta |
151278 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| | |||||| | |||||| |
|
|
| T |
151277 |
tagtgcaatctgaggttgctat |
151256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 66788 - 66568
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||||| || |||||||||| |
|
|
| T |
66788 |
ttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaattttcgtacatgagaagaataagcaaagacaaagtttttcac |
66689 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
||||||||||||| |||||| | ||||||| ||||||||||||||| || ||||| |||| || ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
66688 |
taggatgatatctagtttcaacatcattgactaccctacttagatagtaaatggccctttttgtgccatattcatcctcttgtgctaacatacttcctat |
66589 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
||| |||||||| | |||||| |
|
|
| T |
66588 |
agtgccatctgacgttgctat |
66568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 75966 - 75746
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||||||| || |||||||||| |
|
|
| T |
75966 |
ttaataatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaattttcgtacatgagaagaataagcaaagacaaagtttttcac |
75867 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
||||||||||||| |||||| | ||||||| ||||||||||||||| || ||||| |||| || ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
75866 |
taggatgatatctagtttcaacatcattgactaccctacttagatagtaaatggccctttttgtgccatattcatcctcttgtgctaacatacttcctat |
75767 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
||| |||||||| | |||||| |
|
|
| T |
75766 |
agtgccatctgacgttgctat |
75746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 21513618 - 21513398
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||| |
|
|
| T |
21513618 |
ttaataatatcaaaatgggaataaatataaatgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataagcacagacaaagtttttcac |
21513519 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||||| || ||||| |||||| |||||||||||| |||||||| ||||| || ||||| |
|
|
| T |
21513518 |
taggatgatatcttgtttcaacatcattaagtaccctacttagatagtaaatggccctttctatgccatattcatcttcttgtgctaacatacttcctat |
21513419 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| |||||||| |
|
|
| T |
21513418 |
ggtgccatctgacgctgctat |
21513398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 22849806 - 22849981
Alignment:
| Q |
11 |
tcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgat |
110 |
Q |
| |
|
||||| ||||||| |||||||||||| | | |||||||||| |||| ||| || |||||||| ||||| || |||||||| | ||||||||| ||||||| |
|
|
| T |
22849806 |
tcaaagtgggaatgaacataaacatcgacaagctttatatattgctaaagcttagtacatgaaaagtacaaacaaaggcacaatttttcactgggatgat |
22849905 |
T |
|
| Q |
111 |
atcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgc |
186 |
Q |
| |
|
| ||||||| ||| | ||| || |||||||| |||||||| |||||||||||| |||||| |||||| |||||||| |
|
|
| T |
22849906 |
accttgttttagcattattcagaaccctactaagataataaatggctctttctacgccattttcatcttcttgtgc |
22849981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 26864113 - 26864303
Alignment:
| Q |
13 |
aaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgatat |
112 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||| |||||||| ||||||||||| |||| ||||| ||||| |||||||| | |||||||| | ||| || |
|
|
| T |
26864113 |
aaaatgagaataaacataaatatcaataggatttatatagtgcttaagtttgatacaagagaaatataaacaaaggcacaacttttcacttg-atggtac |
26864211 |
T |
|
| Q |
113 |
cttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctatagt |
204 |
Q |
| |
|
||||||||||| ||||| | ||||||||| |||||||| |||||| ||||| |||||| |||||||||||| || | ||| || |||||||| |
|
|
| T |
26864212 |
cttgtttcagcatcatttaataccctactaagataataaatggctttttctacgccattttcatcctcttgagctagcatacttcctatagt |
26864303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13304477 - 13304698
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||| || | || ||||||||| |
|
|
| T |
13304477 |
tttaataatatcaaaatgggaataaacataaacgtgaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttca |
13304576 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||||| | |||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||| |
|
|
| T |
13304577 |
ctaggatgatatcttgtttcaacatcattaagtactcgacttagataataaatggccctttctgtgccatattcatcctcttgtgctaacatacttccta |
13304676 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
| || |||||||| | |||||| |
|
|
| T |
13304677 |
tggtgccatctgacgttgctat |
13304698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7363010 - 7363231
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| || | || ||||||||| |
|
|
| T |
7363010 |
tttaatgatatcaaaatgggaatacacataaacgtcaaaaggctttatataatgcttgagttttgtacatgagaagaataaacacaaacaaagtttttca |
7363109 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||| |||||||||||| | ||||| ||||| | ||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| || || | |
|
|
| T |
7363110 |
ctaggatggtatcttgtttcaacatcattaagtactcgacttaaataataaatggccctttctgtgccatattcatcctcttgtgctaacatacttccga |
7363209 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||| | |||||| |
|
|
| T |
7363210 |
tagtgccatctgacgttgctat |
7363231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 14691007 - 14691228
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| || | || ||||||||| |
|
|
| T |
14691007 |
tttaatgatatcaaaatgggaatacacataaacgtcaaaaggctttatataatgctttagttttgtacatgagaagaataaacacaaacaaagtttttca |
14691106 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||| |||||||||||| | ||||| ||||| | ||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| || || | |
|
|
| T |
14691107 |
ctaggatggtatcttgtttcaacatcattaagtactcgacttaaataataaatggccctttctgtgccatattcatcctcttgtgctaacatacttccga |
14691206 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||| | |||||| |
|
|
| T |
14691207 |
tagtgccatctgacgttgctat |
14691228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 10784786 - 10784565
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| || | | || |||||| |
|
|
| T |
10784786 |
tttaatgatatcaaaatgagaatacacataaacgtcaaaaggctttatataatgcttcagttttgtacatgagaagaataaacacaaataaagcttttca |
10784687 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||| | ||||| |||||| ||||| |||||||||||||||||||||||||||| |||||||| || | |
|
|
| T |
10784686 |
ctaggatggtatcttgtttcagcatcattaagtactcgacttaaataataaatggccttttctgcgccatattcatcctcttgtgctaacatgcttccaa |
10784587 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
| || |||||||| | |||||| |
|
|
| T |
10784586 |
tggtgccatctgacgttgctat |
10784565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 10155611 - 10155391
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | || |||||||||| |
|
|
| T |
10155611 |
ttaatgatatcaaaataggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataagcacaaacaaagtttttcac |
10155512 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||| | ||||| ||| || ||||| ||||| | ||||| ||| ||||||||||| ||||| || ||||| |
|
|
| T |
10155511 |
taggatgatatcttgtttcaacatcattaagtacacgacttaaatagtaaatggccctttccgtgccatgttcgtcctcttgtgctaacatacttcctat |
10155412 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| ||||||| | |||||| |
|
|
| T |
10155411 |
ggtgtcatctgacgttgctat |
10155391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 183
Target Start/End: Complemental strand, 14141118 - 14141009
Alignment:
| Q |
74 |
aagtataagcaaaggcatagtttttcactaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatatt |
173 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||||| ||||||||||| ||||| | |||||||| |||||||| ||| |||||||| |||||| || |
|
|
| T |
14141118 |
aagtataaacaaaggcataagttttcacttggatgataccttgtttcagcatcatttaaaaccctactaagataataaatgactctttctacgccatttt |
14141019 |
T |
|
| Q |
174 |
catcctcttg |
183 |
Q |
| |
|
|||| ||||| |
|
|
| T |
14141018 |
catcttcttg |
14141009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 72055 - 71834
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||| || | || ||||||||| |
|
|
| T |
72055 |
tttaatgatatcaaaatgggaataaacataaacgtcaaaaggttttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttca |
71956 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||||| | ||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||| |
|
|
| T |
71955 |
ctaggatgatatcttgtttcaacatcattaagtactcgacttaaataataaatggccctttctgtgccatattcatcctcttgtgctaacatacttccta |
71856 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
| || |||||||| | |||||| |
|
|
| T |
71855 |
tggtgccatctgacgttgctat |
71834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 18169198 - 18169418
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
18169198 |
ttaatgatatcaaaatgggaataaacataaatgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttcac |
18169297 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||| | ||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
18169298 |
taggatgatatcttgtttcaacatcattaagtactcgacttaaataataaatggccctttctgtgccatattcatcctcttgtgctaacatacttcctat |
18169397 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| | |||||| |
|
|
| T |
18169398 |
ggtgccatctgacgttgctat |
18169418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 14340221 - 14340442
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||||||||| |||| || | || ||||||||| |
|
|
| T |
14340221 |
tttaatgatatcaaaatgggaatacacataaacgtcaaaaggctttttataatgcttgagttttgtacatgagaagaataaacacaaacaaagtttttca |
14340320 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||| |||||||||||| | ||||| ||||| | ||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| || || | |
|
|
| T |
14340321 |
ctaggatggtatcttgtttcaacatcattaagtactcgacttaaataataaatggccctttctgtgccatattcatcctcttgtgctaacatacttccga |
14340420 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| |||||||| | |||||| |
|
|
| T |
14340421 |
tagtgccatctgacgttgctat |
14340442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 13375556 - 13375641
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaag |
87 |
Q |
| |
|
||||| ||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |
|
|
| T |
13375556 |
ttaattatatcaaaatgagaatagatataaacatcaaaaggctttatgtaatgcttaagttttgtacatgagaaatacaagcaaag |
13375641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 14164780 - 14164874
Alignment:
| Q |
98 |
tcactaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacat |
192 |
Q |
| |
|
||||| |||||||| |||||||| || || || | ||||||||| |||||||| |||||||||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
14164780 |
tcactgggatgataccttgtttcggcatcgtttaataccctactaagataataaatggctctttctacgccattttcatcctcttgtgctaacat |
14164874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 18458973 - 18458833
Alignment:
| Q |
11 |
tcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgat |
110 |
Q |
| |
|
|||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||||| | || || || || | ||| | ||||||||| ||||| | |
|
|
| T |
18458973 |
tcaaaatgaaaataaacataaatatcaacaggctttatatattgcttaagttttgtacaacaaaaatacaaacacatgcacaatttttcacttggatggt |
18458874 |
T |
|
| Q |
111 |
atcttgtttcagcgtcattgagtaccctacttagataatag |
151 |
Q |
| |
|
| ||||||||| | ||||| | | |||||| ||||||||| |
|
|
| T |
18458873 |
accttgtttcatcatcatttaaaatcctactaagataatag |
18458833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 20601 - 20821
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
20601 |
ttaatgatatcaaaatgagaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttcac |
20700 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||| | ||||| |||||| ||||| ||||||| ||||| ||||||||||||||| ||||| || ||||| |
|
|
| T |
20701 |
taggatgatatcttgtttcaacatcattaagtactcgacttaaataataaatggccctttctgtgccatgttcatcctcttgtgctaacatacttcctat |
20800 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| |||||||| | |||||| |
|
|
| T |
20801 |
ggtgccatctgacgttgctat |
20821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1610 - 1389
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||| |||||||| | |||| |||||| |
|
|
| T |
1610 |
tttaattatatcaaaatgggaataaacatagacgtgaaacggctttatataatgcttaagttttgtacatgagaaatataagcatatacataacttttca |
1511 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgccta |
200 |
Q |
| |
|
|||||||| ||||||||||| || ||||| | ||| ||||| |||||||| ||||| ||||||||||||| ||||||||||||||| | |||||| |||| |
|
|
| T |
1510 |
ctaggatggtatcttgtttcggcatcatttaatactctactaagataatatatggccctttctgcgccattttcatcctcttgtgctagcatgcttccta |
1411 |
T |
|
| Q |
201 |
tagttccatctgatgctgctat |
222 |
Q |
| |
|
|||| | || ||||||||||| |
|
|
| T |
1410 |
tagtacattccgatgctgctat |
1389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 33594 - 33374
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| | || |||||||||| |
|
|
| T |
33594 |
ttaatgatatcaaaatgggaataaacataaacgtcaaaagactttatataatgcttaagttttgtacatgagaagaataagcacaaacaaagtttttcac |
33495 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||| | ||||| ||| || ||||| ||||||| ||||| |||||| |||||||| ||||| || ||||| |
|
|
| T |
33494 |
taggatgatatcttgtttcaacatcattaagtacacgacttaaatagtaaatggccctttctgtgccatgttcatcttcttgtgctaacatacttcctat |
33395 |
T |
|
| Q |
202 |
agttccatctgatgctgctat |
222 |
Q |
| |
|
|| | |||||| | |||||| |
|
|
| T |
33394 |
ggtgctatctgacgttgctat |
33374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 13643 - 13434
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||| ||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| | || |||||||||| |
|
|
| T |
13643 |
ttaatgatatcagaatgggagtacacataaacgtcaaaaggttttatataatgcttaagttttgtacatgagaagaataagcacaaacaaagtttttcac |
13544 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||||| |||| |||||| ||||| ||||||| |||||||||||| |||||||| ||||| || ||||| |
|
|
| T |
13543 |
taggatgatatcttgtttcgacatcattaagtacccgacttgaataataaatggccctttctgtgccatattcatcttcttgtgctaacatacttcctat |
13444 |
T |
|
| Q |
202 |
agttccatct |
211 |
Q |
| |
|
||| |||||| |
|
|
| T |
13443 |
agtgccatct |
13434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 35222 - 35433
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
35222 |
ttaatgatatcaaaatgagaataaatataaacgtcaaaaggctttatataatgcttcagttttgtacatgagaagaataaacacaaacaaagtttttcac |
35321 |
T |
|
| Q |
102 |
taggatgatatcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctat |
201 |
Q |
| |
|
||||||||||||| |||||| | ||||| ||||| | ||||| ||| || ||||| ||||| | ||||| ||||| ||||||||| | ||| || ||||| |
|
|
| T |
35322 |
taggatgatatctcgtttcaacatcattaagtacacgacttaaatagtaaatggccctttccgtgccatgttcattctcttgtgctagcatacttcctat |
35421 |
T |
|
| Q |
202 |
agttccatctga |
213 |
Q |
| |
|
|| |||||||| |
|
|
| T |
35422 |
ggtaccatctga |
35433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0897 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0897
Description:
Target: scaffold0897; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 1861 - 1979
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
1861 |
ttaatgatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaataaacacaaacaaagtttttcac |
1960 |
T |
|
| Q |
102 |
taggatgatatcttgtttc |
120 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
1961 |
taggatgatatcttgtttc |
1979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 130109 - 130227
Alignment:
| Q |
2 |
ttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcac |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | || || | || |||||||||| |
|
|
| T |
130109 |
ttaatgatatcaaaatgggaataaacataaacgtcaaaaggctttatataatgcttaagttttgtacatgagaagaacaaacacaaacaaagtttttcac |
130208 |
T |
|
| Q |
102 |
taggatgatatcttgtttc |
120 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
130209 |
taggatgatatcttgtttc |
130227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0037 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0037
Description:
Target: scaffold0037; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 67483 - 67279
Alignment:
| Q |
1 |
tttaataatatcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttca |
100 |
Q |
| |
|
|||||| ||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || || | || |||| |||||| |
|
|
| T |
67483 |
tttaattatatcgaaatgagagtaaacataaacatcaaaagactttatataatgcttaagtttagtacatgagaaataaaaaaacagacataacttttca |
67384 |
T |
|
| Q |
101 |
ctaggatgatatcttgtttc-agcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcct |
199 |
Q |
| |
|
|| | |||||||||||||| ||| || || | |||||||| ||||| || |||||||||||| |||||| ||||||||||||| | ||||| || ||| |
|
|
| T |
67383 |
ctggaatgatatcttgttttgagcatcgtttaacaccctactaagatattaaatggctctttctacgccattttcatcctcttgttctaacatactccct |
67284 |
T |
|
| Q |
200 |
atagt |
204 |
Q |
| |
|
||||| |
|
|
| T |
67283 |
atagt |
67279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0093 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0093
Description:
Target: scaffold0093; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 54110 - 54300
Alignment:
| Q |
13 |
aaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgatat |
112 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||| | |||||||||||||||||| |||| ||||| ||||| |||||||| | |||||||| | ||| || |
|
|
| T |
54110 |
aaaatgagaataaacataaatatcaataggatatatataatgcttaagtttgatacaagagaaatataaacaaaggcacaacttttcacttg-atggtac |
54208 |
T |
|
| Q |
113 |
cttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctatagt |
204 |
Q |
| |
|
||||||||||| ||||| | ||||||||| |||||||| |||||| ||||| |||||| |||||||||||| || | ||| || |||||||| |
|
|
| T |
54209 |
cttgtttcagcatcatttaataccctactaagataataaatggctttttctacgccattttcatcctcttgagctagcatacttcctatagt |
54300 |
T |
|
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Target: scaffold0401 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0401
Description:
Target: scaffold0401; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 6385 - 6192
Alignment:
| Q |
11 |
tcaaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgat |
110 |
Q |
| |
|
|||||||| ||||||||||||||||||| || ||||||||| |||||||| || | || || || || || ||||| |||| ||||||||| ||||||| |
|
|
| T |
6385 |
tcaaaatgagaataaacataaacatcaacagactttatatattgcttaagcttcatgcaagaaaaatacaaacaaagacataatttttcacttggatgat |
6286 |
T |
|
| Q |
111 |
atcttgtttcagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctatagt |
204 |
Q |
| |
|
||||||||||||| ||||| ||| |||| ||||| || | |||||||||| |||||| |||||| |||||||| | ||| || |||||||| |
|
|
| T |
6285 |
atcttgtttcagcatcatttgaaaccatactaagatagtaaacggctctttctacgccattttcatcttcttgtgctagcatacttcctatagt |
6192 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 57013 - 57197
Alignment:
| Q |
21 |
aataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaa-gtataagcaaaggcatagtttttcactaggatgatatcttgttt |
119 |
Q |
| |
|
|||||||||| ||||||| | |||||||| ||||||||||| ||||||| || ||| || |||||||| | ||||||||| |||||||| ||||||| |
|
|
| T |
57013 |
aataaacatagacatcaacaatttttatatattgcttaagtttaatacatgaaaatgtacaaacaaaggcacaatttttcacttggatgataccttgttt |
57112 |
T |
|
| Q |
120 |
cagcgtcattgagtaccctacttagataatagatggctctttctgcgccatattcatcctcttgtgccaacatgctgcctatagt |
204 |
Q |
| |
|
||| ||||| | |||||||| |||||||| ||||| ||||| |||||| ||||||||||||||||| ||| || |||||||| |
|
|
| T |
57113 |
tagcatcattaaaaaccctactaagataataaatggccctttcgacgccattttcatcctcttgtgccagcatacttcctatagt |
57197 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0757 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0757
Description:
Target: scaffold0757; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 3468 - 3318
Alignment:
| Q |
13 |
aaaatgggaataaacataaacatcaaaaggctttatataatgcttaagttttgtacatgagaagtataagcaaaggcatagtttttcactaggatgatat |
112 |
Q |
| |
|
|||||| || |||||||||||||||| ||| |||||||| ||||||||||| |||| || ||| | || |||||||||||||||||||| ||||||| |
|
|
| T |
3468 |
aaaatgtgagtaaacataaacatcaataggatttatatattgcttaagtttcatacaggaaaagaacaaacaaaggcatagtttttcacttggatgatcg |
3369 |
T |
|
| Q |
113 |
cttgtttcagcgtcattgagtaccctacttagataatagatggctctttct |
163 |
Q |
| |
|
|| |||||| | ||||| | |||||||| |||||||| |||| ||||||| |
|
|
| T |
3368 |
ctagtttcaacatcatttaaaaccctactaagataataaatggatctttct |
3318 |
T |
|
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Target: scaffold0046 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 56405 - 56355
Alignment:
| Q |
172 |
ttcatcctcttgtgccaacatgctgcctatagttccatctgatgctgctat |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| | |||||| |
|
|
| T |
56405 |
ttcatcctcttgtgccaacatgctgcctatagtgccatctgacgttgctat |
56355 |
T |
|
Back To:
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