View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6951_high_13 (Length: 256)
Name: NF6951_high_13
Description: NF6951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6951_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 53005925 - 53005707
Alignment:
| Q |
28 |
gatcagtaagcaattgactatactaagatgtcaaatagcgtcctgttcagcattaagtgacaaagtttagcagcaaatattatgtgcactgtaactacat |
127 |
Q |
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| T |
53005925 |
gatcagtaagcaattgactatactaagatgtcaaatagcgtcctgttcagcattaagtgacaaagtttagcagcaaatactatgtgcactgtaactacat |
53005826 |
T |
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| Q |
128 |
ggtttaacggtcaccaaacttcaaaacagaagctgaactgattgcataattaacatagtttccaagcatttagtagatacaatgagttgcagtgtaaggt |
227 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53005825 |
ggtttaacggtcaccaaacttcaaaacagaagctgaactgattgcataattaacatagtttccaagcatttagtagatacaatgagttgcagtgtaaggt |
53005726 |
T |
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| Q |
228 |
tttaatctgatgcttcttc |
246 |
Q |
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||||||||||||||||||| |
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| T |
53005725 |
tttaatctgatgcttcttc |
53005707 |
T |
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