View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6952_low_7 (Length: 334)

Name: NF6952_low_7
Description: NF6952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6952_low_7
NF6952_low_7
[»] chr8 (40 HSPs)
chr8 (133-334)||(28890899-28891096)
chr8 (133-334)||(28895636-28895833)
chr8 (133-334)||(28328041-28328240)
chr8 (134-334)||(28332764-28332962)
chr8 (134-325)||(16752374-16752563)
chr8 (133-334)||(16757109-16757316)
chr8 (137-334)||(4812336-4812536)
chr8 (134-334)||(25684776-25684972)
chr8 (134-334)||(23179410-23179609)
chr8 (133-334)||(9020956-9021155)
chr8 (134-232)||(29554705-29554803)
chr8 (134-331)||(590931-591126)
chr8 (134-251)||(3276504-3276626)
chr8 (132-334)||(17799276-17799472)
chr8 (152-231)||(21034100-21034181)
chr8 (134-251)||(26268084-26268207)
chr8 (133-205)||(4823550-4823622)
chr8 (134-251)||(30423420-30423541)
chr8 (146-236)||(33032879-33032971)
chr8 (272-334)||(21034003-21034064)
chr8 (272-334)||(30423349-30423410)
chr8 (272-332)||(31162502-31162562)
chr8 (272-334)||(26268218-26268280)
chr8 (272-334)||(3005617-3005678)
chr8 (272-334)||(33032788-33032849)
chr8 (272-334)||(31035406-31035470)
chr8 (271-311)||(3276455-3276494)
chr8 (136-188)||(28228790-28228842)
chr8 (271-334)||(43079890-43079953)
chr8 (271-334)||(43082261-43082324)
chr8 (132-186)||(3874435-3874489)
chr8 (272-334)||(15072999-15073061)
chr8 (133-237)||(2266935-2267039)
chr8 (272-334)||(21482599-21482660)
chr8 (304-334)||(29554803-29554833)
chr8 (284-330)||(31566555-31566601)
chr8 (284-334)||(31578274-31578324)
chr8 (134-186)||(28251410-28251463)
chr8 (286-334)||(9765865-9765912)
chr8 (286-334)||(26403276-26403323)
[»] scaffold1050 (1 HSPs)
scaffold1050 (132-334)||(2917-3118)
[»] chr3 (63 HSPs)
chr3 (134-334)||(54193360-54193557)
chr3 (133-334)||(6303443-6303643)
chr3 (134-334)||(10093923-10094123)
chr3 (134-334)||(10200805-10201003)
chr3 (133-334)||(22625828-22626032)
chr3 (133-334)||(54188643-54188842)
chr3 (133-251)||(10099923-10100042)
chr3 (133-334)||(10897139-10897337)
chr3 (134-250)||(27544504-27544619)
chr3 (134-334)||(5858678-5858874)
chr3 (132-251)||(11079724-11079847)
chr3 (134-334)||(10594883-10595082)
chr3 (133-334)||(29913804-29914003)
chr3 (132-236)||(29897525-29897631)
chr3 (134-334)||(10949115-10949308)
chr3 (133-334)||(20031169-20031365)
chr3 (133-334)||(10612626-10612826)
chr3 (133-251)||(47882737-47882859)
chr3 (140-334)||(47878033-47878219)
chr3 (134-251)||(3330098-3330221)
chr3 (134-334)||(48390152-48390350)
chr3 (133-333)||(27761839-27762033)
chr3 (134-237)||(4535842-4535946)
chr3 (166-322)||(16462336-16462495)
chr3 (274-334)||(10100080-10100140)
chr3 (134-226)||(38003103-38003195)
chr3 (274-334)||(10207989-10208049)
chr3 (271-334)||(27544406-27544469)
chr3 (146-216)||(7418306-7418378)
chr3 (272-334)||(4535748-4535810)
chr3 (135-236)||(13893686-13893789)
chr3 (272-331)||(38003006-38003064)
chr3 (273-334)||(47882870-47882930)
chr3 (272-334)||(11079651-11079713)
chr3 (284-334)||(1674176-1674226)
chr3 (272-334)||(36871284-36871346)
chr3 (271-334)||(50494211-50494274)
chr3 (133-192)||(27420998-27421056)
chr3 (272-334)||(3330027-3330087)
chr3 (284-334)||(7418198-7418247)
chr3 (271-334)||(458496-458559)
chr3 (271-334)||(746969-747032)
chr3 (272-332)||(13893600-13893658)
chr3 (271-334)||(38210582-38210645)
chr3 (134-192)||(16997150-16997209)
chr3 (284-334)||(28761423-28761473)
chr3 (133-186)||(36871148-36871202)
chr3 (284-334)||(53917660-53917709)
chr3 (132-193)||(14634289-14634350)
chr3 (282-331)||(21334742-21334791)
chr3 (286-334)||(1417526-1417573)
chr3 (286-334)||(1736341-1736388)
chr3 (271-334)||(6063428-6063491)
chr3 (286-334)||(8370522-8370569)
chr3 (271-334)||(10621512-10621575)
chr3 (286-334)||(18552919-18552966)
chr3 (286-334)||(21711227-21711274)
chr3 (271-334)||(25389117-25389180)
chr3 (131-186)||(25389273-25389329)
chr3 (286-334)||(27974988-27975035)
chr3 (286-334)||(27986482-27986529)
chr3 (286-334)||(30709826-30709873)
chr3 (141-186)||(53468302-53468349)
[»] chr2 (41 HSPs)
chr2 (133-334)||(2736338-2736537)
chr2 (133-334)||(45679856-45680055)
chr2 (134-334)||(33670817-33671015)
chr2 (133-334)||(39680178-39680378)
chr2 (129-334)||(39687116-39687326)
chr2 (146-334)||(2741074-2741260)
chr2 (134-334)||(27517491-27517687)
chr2 (133-334)||(17462569-17462768)
chr2 (133-322)||(22717082-22717274)
chr2 (134-322)||(22712374-22712565)
chr2 (134-334)||(17943669-17943867)
chr2 (133-334)||(20054609-20054813)
chr2 (136-334)||(12781075-12781269)
chr2 (133-237)||(38191242-38191346)
chr2 (134-334)||(20049866-20050070)
chr2 (136-334)||(30479128-30479322)
chr2 (133-251)||(37170606-37170729)
chr2 (272-334)||(38191146-38191207)
chr2 (272-334)||(40699583-40699645)
chr2 (273-333)||(8173539-8173599)
chr2 (272-332)||(28458815-28458874)
chr2 (271-334)||(35215570-35215633)
chr2 (271-334)||(35217947-35218010)
chr2 (271-334)||(45332165-45332228)
chr2 (284-334)||(34575134-34575184)
chr2 (272-332)||(20592288-20592348)
chr2 (272-334)||(17897231-17897292)
chr2 (133-188)||(28458692-28458751)
chr2 (284-334)||(36558862-36558911)
chr2 (284-334)||(36561139-36561188)
chr2 (284-334)||(42064722-42064772)
chr2 (132-186)||(22287179-22287234)
chr2 (132-186)||(42923291-42923346)
chr2 (132-186)||(42923349-42923404)
chr2 (286-334)||(1345587-1345634)
chr2 (286-334)||(2838076-2838123)
chr2 (134-187)||(7462789-7462844)
chr2 (274-334)||(11578095-11578155)
chr2 (286-334)||(13569332-13569379)
chr2 (286-334)||(14699053-14699100)
chr2 (286-334)||(20522224-20522271)
[»] chr4 (66 HSPs)
chr4 (134-334)||(15831275-15831478)
chr4 (132-334)||(18587100-18587300)
chr4 (133-251)||(11853778-11853898)
chr4 (133-334)||(8529401-8529601)
chr4 (133-251)||(15312526-15312650)
chr4 (134-334)||(4555915-4556108)
chr4 (132-334)||(16688792-16688988)
chr4 (133-334)||(4570228-4570421)
chr4 (132-251)||(7050123-7050246)
chr4 (134-334)||(15317092-15317290)
chr4 (133-334)||(4558445-4558640)
chr4 (133-334)||(4885008-4885203)
chr4 (134-231)||(16489583-16489681)
chr4 (133-334)||(55822398-55822592)
chr4 (133-236)||(47566717-47566822)
chr4 (134-236)||(36771621-36771725)
chr4 (139-236)||(36769704-36769803)
chr4 (274-334)||(11853682-11853742)
chr4 (272-334)||(36769613-36769674)
chr4 (272-334)||(25613943-25614004)
chr4 (284-331)||(15312453-15312500)
chr4 (284-334)||(31300558-31300607)
chr4 (272-334)||(36771530-36771591)
chr4 (133-188)||(31300677-31300733)
chr4 (272-334)||(16185820-16185882)
chr4 (298-334)||(7050269-7050305)
chr4 (271-334)||(22780357-22780420)
chr4 (272-332)||(28453971-28454031)
chr4 (271-334)||(44599822-44599885)
chr4 (284-331)||(3578669-3578716)
chr4 (134-209)||(4874336-4874410)
chr4 (203-251)||(31300629-31300681)
chr4 (272-334)||(10114603-10114665)
chr4 (284-334)||(16489483-16489532)
chr4 (134-188)||(32273806-32273860)
chr4 (272-332)||(9864000-9864060)
chr4 (271-334)||(16931773-16931836)
chr4 (271-334)||(16934127-16934190)
chr4 (271-334)||(18709148-18709211)
chr4 (271-334)||(22782722-22782785)
chr4 (134-237)||(25613810-25613915)
chr4 (272-334)||(36378579-36378641)
chr4 (134-186)||(47563194-47563248)
chr4 (284-326)||(47566636-47566676)
chr4 (284-334)||(9148538-9148587)
chr4 (133-192)||(16185685-16185746)
chr4 (272-334)||(16455528-16455588)
chr4 (284-330)||(16638965-16639011)
chr4 (133-214)||(16639075-16639155)
chr4 (284-334)||(18537471-18537521)
chr4 (284-334)||(19322980-19323030)
chr4 (272-334)||(22295451-22295513)
chr4 (284-334)||(25357928-25357978)
chr4 (284-334)||(26557871-26557921)
chr4 (272-334)||(38890210-38890272)
chr4 (271-332)||(14789414-14789473)
chr4 (133-221)||(16631425-16631512)
chr4 (134-186)||(18709003-18709056)
chr4 (134-186)||(40637513-40637566)
chr4 (272-329)||(47150878-47150935)
chr4 (286-334)||(10047383-10047430)
chr4 (271-334)||(15032531-15032595)
chr4 (284-332)||(16631319-16631367)
chr4 (133-186)||(18311214-18311269)
chr4 (133-186)||(18409191-18409246)
chr4 (286-334)||(39245998-39246045)
[»] chr7 (53 HSPs)
chr7 (134-334)||(8378357-8378552)
chr7 (133-334)||(15540843-15541044)
chr7 (133-251)||(25405627-25405746)
chr7 (133-331)||(25351488-25351684)
chr7 (133-251)||(7070008-7070127)
chr7 (134-251)||(3319869-3319988)
chr7 (134-251)||(7075009-7075127)
chr7 (133-334)||(2075249-2075437)
chr7 (136-334)||(34546734-34546928)
chr7 (133-251)||(3324636-3324756)
chr7 (134-237)||(30247198-30247303)
chr7 (133-334)||(7464364-7464567)
chr7 (134-251)||(44143722-44143843)
chr7 (133-334)||(44016513-44016709)
chr7 (133-331)||(25357182-25357379)
chr7 (136-334)||(25410264-25410463)
chr7 (134-334)||(2121033-2121229)
chr7 (133-334)||(44010602-44010798)
chr7 (271-334)||(25405526-25405589)
chr7 (272-334)||(3320037-3320099)
chr7 (272-334)||(3324785-3324847)
chr7 (271-334)||(7069913-7069976)
chr7 (133-236)||(42006888-42006993)
chr7 (271-330)||(7074924-7074983)
chr7 (136-216)||(21369888-21369970)
chr7 (132-192)||(44512361-44512423)
chr7 (271-334)||(30247104-30247166)
chr7 (284-334)||(42006797-42006847)
chr7 (274-334)||(44512515-44512573)
chr7 (284-334)||(11081752-11081802)
chr7 (133-186)||(24748981-24749036)
chr7 (272-331)||(6332466-6332525)
chr7 (276-334)||(21369776-21369834)
chr7 (272-334)||(44143854-44143914)
chr7 (271-334)||(2935510-2935573)
chr7 (271-334)||(9027178-9027241)
chr7 (286-334)||(9190054-9190101)
chr7 (286-334)||(28617271-28617318)
chr7 (271-334)||(31155895-31155958)
chr7 (284-334)||(6067196-6067246)
chr7 (272-330)||(13290459-13290517)
chr7 (284-334)||(22108308-22108357)
chr7 (284-334)||(22137319-22137368)
chr7 (284-334)||(24813495-24813545)
chr7 (284-334)||(40550068-40550117)
chr7 (284-334)||(40552346-40552395)
chr7 (133-186)||(443989-444045)
chr7 (271-334)||(1606621-1606684)
chr7 (286-334)||(2580394-2580441)
chr7 (271-334)||(7351636-7351699)
chr7 (286-334)||(20284093-20284140)
chr7 (286-334)||(21983288-21983335)
chr7 (286-334)||(33332496-33332543)
[»] chr6 (53 HSPs)
chr6 (134-334)||(13883608-13883806)
chr6 (134-251)||(31248544-31248662)
chr6 (133-334)||(25941803-25942001)
chr6 (132-330)||(26887075-26887271)
chr6 (134-334)||(3577338-3577537)
chr6 (134-251)||(30987356-30987473)
chr6 (133-251)||(13878951-13879071)
chr6 (133-251)||(35201156-35201274)
chr6 (133-251)||(16786147-16786265)
chr6 (151-334)||(17038368-17038550)
chr6 (134-334)||(25465754-25465947)
chr6 (133-334)||(17694700-17694900)
chr6 (133-334)||(22342651-22342849)
chr6 (133-334)||(22351703-22351900)
chr6 (132-236)||(33216055-33216161)
chr6 (146-236)||(12166010-12166102)
chr6 (134-236)||(13467318-13467422)
chr6 (132-236)||(19701755-19701860)
chr6 (152-236)||(26643399-26643483)
chr6 (152-236)||(26749365-26749449)
chr6 (271-334)||(13878860-13878923)
chr6 (271-334)||(16786052-16786115)
chr6 (133-211)||(5165692-5165772)
chr6 (272-334)||(35201313-35201375)
chr6 (272-334)||(12166133-12166194)
chr6 (272-334)||(33215961-33216022)
chr6 (271-332)||(31248700-31248761)
chr6 (136-251)||(17066057-17066179)
chr6 (272-334)||(11262726-11262788)
chr6 (272-334)||(13467454-13467514)
chr6 (272-334)||(19696708-19696770)
chr6 (272-334)||(22857938-22858000)
chr6 (272-330)||(26643312-26643369)
chr6 (272-330)||(26749278-26749335)
chr6 (133-186)||(10584359-10584414)
chr6 (291-334)||(5165818-5165861)
chr6 (271-334)||(16455409-16455472)
chr6 (287-334)||(17065986-17066033)
chr6 (272-334)||(15346614-15346675)
chr6 (178-211)||(5165772-5165805)
chr6 (271-334)||(33309123-33309186)
chr6 (284-331)||(17012310-17012357)
chr6 (279-334)||(26932555-26932609)
chr6 (272-334)||(28078180-28078242)
chr6 (284-334)||(29754707-29754756)
chr6 (284-334)||(30443555-30443605)
chr6 (134-186)||(5273055-5273108)
chr6 (134-187)||(3629711-3629765)
chr6 (282-334)||(4641087-4641139)
chr6 (286-334)||(5757524-5757571)
chr6 (286-334)||(12195515-12195562)
chr6 (271-334)||(19704551-19704614)
chr6 (271-334)||(33311392-33311455)
[»] chr1 (40 HSPs)
chr1 (134-334)||(2232724-2232926)
chr1 (133-334)||(9526600-9526797)
chr1 (133-251)||(9521938-9522057)
chr1 (132-334)||(2393131-2393330)
chr1 (133-334)||(21353196-21353396)
chr1 (133-332)||(2401073-2401267)
chr1 (140-334)||(4144543-4144731)
chr1 (129-239)||(25134293-25134404)
chr1 (14-123)||(32569421-32569530)
chr1 (271-334)||(9521849-9521912)
chr1 (272-331)||(25134208-25134266)
chr1 (284-334)||(14997176-14997226)
chr1 (271-334)||(16226399-16226462)
chr1 (133-186)||(25860251-25860306)
chr1 (271-326)||(3091091-3091145)
chr1 (284-334)||(14183590-14183640)
chr1 (284-334)||(15916623-15916673)
chr1 (284-334)||(27916729-27916779)
chr1 (271-334)||(9459403-9459466)
chr1 (271-334)||(9463230-9463293)
chr1 (271-334)||(23786071-23786134)
chr1 (284-332)||(26613238-26613286)
chr1 (272-334)||(6115089-6115151)
chr1 (157-211)||(9314522-9314574)
chr1 (134-186)||(13215465-13215518)
chr1 (133-214)||(3090959-3091039)
chr1 (272-334)||(9314630-9314691)
chr1 (272-334)||(13127674-13127736)
chr1 (284-334)||(15823778-15823827)
chr1 (272-334)||(16561700-16561762)
chr1 (286-334)||(13598402-13598449)
chr1 (271-334)||(16231795-16231857)
chr1 (286-334)||(19072932-19072979)
chr1 (286-334)||(19120822-19120869)
chr1 (286-334)||(26644943-26644990)
chr1 (133-186)||(28206911-28206965)
chr1 (286-334)||(37069774-37069821)
chr1 (271-334)||(47179945-47180007)
chr1 (286-334)||(47703982-47704029)
chr1 (133-186)||(50078634-50078689)
[»] scaffold0006 (2 HSPs)
scaffold0006 (134-251)||(231328-231445)
scaffold0006 (286-334)||(5687-5734)
[»] chr5 (47 HSPs)
chr5 (133-334)||(35385302-35385500)
chr5 (134-334)||(2297849-2298049)
chr5 (134-334)||(1170944-1171142)
chr5 (134-334)||(22672968-22673163)
chr5 (133-334)||(42238394-42238589)
chr5 (156-334)||(25445630-25445803)
chr5 (156-334)||(25452629-25452802)
chr5 (136-334)||(28786538-28786728)
chr5 (134-231)||(1240662-1240760)
chr5 (133-236)||(40222993-40223098)
chr5 (140-334)||(17841110-17841297)
chr5 (134-236)||(11962287-11962390)
chr5 (134-236)||(20437145-20437249)
chr5 (134-236)||(16093144-16093249)
chr5 (133-216)||(10627611-10627696)
chr5 (272-334)||(11962420-11962481)
chr5 (272-334)||(10627500-10627561)
chr5 (133-237)||(31782310-31782413)
chr5 (272-324)||(16093279-16093330)
chr5 (133-186)||(37705625-37705680)
chr5 (284-332)||(40222901-40222949)
chr5 (271-334)||(1240562-1240624)
chr5 (271-334)||(10757408-10757470)
chr5 (272-334)||(31782443-31782503)
chr5 (271-334)||(3373121-3373184)
chr5 (271-334)||(15552477-15552540)
chr5 (271-334)||(31542966-31543029)
chr5 (271-334)||(31545312-31545375)
chr5 (271-334)||(10749932-10749994)
chr5 (138-186)||(17818338-17818388)
chr5 (271-334)||(31179357-31179418)
chr5 (284-334)||(4410254-4410303)
chr5 (272-334)||(6661170-6661232)
chr5 (272-334)||(15143699-15143761)
chr5 (284-334)||(15354573-15354622)
chr5 (284-334)||(21288993-21289042)
chr5 (284-334)||(26406464-26406514)
chr5 (132-193)||(34033420-34033479)
chr5 (273-334)||(4897962-4898023)
chr5 (134-186)||(10528937-10528990)
chr5 (152-216)||(26406340-26406402)
chr5 (286-334)||(9353378-9353425)
chr5 (286-334)||(17004006-17004053)
chr5 (271-334)||(34477037-34477100)
chr5 (286-334)||(36932396-36932443)
chr5 (271-334)||(38960116-38960179)
chr5 (286-334)||(42127456-42127503)
[»] scaffold0131 (2 HSPs)
scaffold0131 (134-251)||(17706-17824)
scaffold0131 (272-306)||(17621-17655)
[»] scaffold0256 (1 HSPs)
scaffold0256 (133-334)||(16459-16657)
[»] scaffold0209 (2 HSPs)
scaffold0209 (133-213)||(16884-16965)
scaffold0209 (271-334)||(16972-17034)
[»] scaffold0468 (1 HSPs)
scaffold0468 (272-334)||(1627-1689)
[»] scaffold0267 (2 HSPs)
scaffold0267 (271-334)||(282-345)
scaffold0267 (134-186)||(421-473)
[»] scaffold0140 (3 HSPs)
scaffold0140 (284-334)||(22356-22405)
scaffold0140 (284-334)||(24631-24680)
scaffold0140 (286-334)||(8465-8512)
[»] scaffold0477 (1 HSPs)
scaffold0477 (282-334)||(6976-7028)
[»] scaffold0472 (1 HSPs)
scaffold0472 (271-334)||(6440-6503)


Alignment Details
Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 28891096 - 28890899
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28891096 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 28890997  T
Q  233 aaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    ||||||||||| |||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28890996 aaaaacagcaacagataaa----aggaagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 28890901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 28895833 - 28895636
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28895833 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 28895734  T
Q  233 aaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  28895733 aaaaacagcaagagataaa----aggaagagagagataaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctagaggagagag 28895638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 28328240 - 28328041
Alignment:
Q  133 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28328240 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 28328141  T
Q  231 acaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    |||||||||||||||| ||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28328140 acaaaaacagcaagagttaaa----ggagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 28328045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 28332962 - 28332764
Alignment:
Q  134 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28332962 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 28332863  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||||||| ||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28332862 caaaaacagcaagagttaaa----ggagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggaggagaga 28332767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 134 - 325
Target Start/End: Original strand, 16752374 - 16752563
Alignment:
Q  134 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16752374 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 16752473  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggg 325  Q
    ||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16752474 caaaaacagcaagagataaa----ggagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggg 16752563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 16757109 - 16757316
Alignment:
Q  133 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16757109 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 16757208  T
Q  231 acaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaa----cacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    |||||||||||||||||||||                    ||||    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16757209 acaaaaacagcaagagataaaggggagagagagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 16757308  T
Q  327 agagagca 334  Q
    ||||||||    
T  16757309 agagagca 16757316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 4812336 - 4812536
Alignment:
Q  137 tgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaa 235  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4812336 tgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaa 4812435  T
Q  236 aacagcaagagataaa--nnnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagc 333  Q
    ||||||||||||||||                      ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  4812436 aacagcaagagataaaagagagggagagagggagagagagaacacaagatatttgtttacccagttcggtctaattatgacctagtcttggggagagagc 4812535  T
Q  334 a 334  Q
    |    
T  4812536 a 4812536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 25684972 - 25684776
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25684972 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaaacaagtgggtagcaaataatccaaac 25684873  T
Q  233 a-aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    | |||||||||||| |||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684872 aaaaaacagcaagaaataaa------aaagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 25684779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 23179410 - 23179609
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23179410 tgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaaca 23179509  T
Q  234 a----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    |    |||||||||||||||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23179510 aaagtaaacagcaagagataaa----aggaagaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggaga 23179604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 9020956 - 9021155
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaa-acttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||| || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9020956 ttgttgtgaatttgtcgagaaaaccacaccaataaagacttaatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 9021055  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  9021056 caaaagtaaacagcaagagataaa------aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggtgga 9021148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 29554705 - 29554803
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29554705 tgttgtgaattcgttgagaaaaccacaccaataatacttgatgcgtggagtaaattaatatcaagtaatcaaatcaagctggtagcaaataatccaaac 29554803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 134 - 331
Target Start/End: Complemental strand, 591126 - 590931
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaactt-gatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcc---a 229  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||   |    
T  591126 tgttgtgaattcgttgagaaaaccacaccaataaaaatttgatgcgtggaaaaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaata 591027  T
Q  230 aacaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    ||  ||||||||||||||||||                   |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  591026 aaataaaacagcaagagataaa-----aggaagagagagaaaagaacacaaga-atttatttacccagttcggtctaatgatgtcctagtctgggggaga 590933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 3276626 - 3276504
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||| |||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3276626 tgttgtgaattccttgttaaaaccacaccaataaaaacttgatgcgtggagcaaattaataacaagtaatcaaatcaagcgggtagcaaataatccaaac 3276527  T
Q  233 aa----aaacagcaagagataaa 251  Q
    ||    |||||||||||||||||    
T  3276526 aaaagtaaacagcaagagataaa 3276504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 334
Target Start/End: Original strand, 17799276 - 17799472
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||  ||| || |||||||||||||||||||||||||||||||||||||||||| |||    
T  17799276 tttgttgtgaattcgttgtgaaaaccacaccaataaaaacttgatatgtgaagtaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaa 17799375  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    ||||| |||||||||||                    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  17799376 acaaaagtaaacaacaagagataaaaggaagaagg----------agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggag 17799464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 21034181 - 21034100
Alignment:
Q  152 aaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21034181 aaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 21034100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 26268084 - 26268207
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||| ||||    
T  26268084 tgttgtgaattcgttctgaaaaccacaccaataataaacttgatgcgtggagcaaattaataccatgtaattaaatcaagctggtagaaaataattcaaa 26268183  T
Q  232 caa----aaacagcaagagataaa 251  Q
    |||    |||||||||||||||||    
T  26268184 caaaagtaaacagcaagagataaa 26268207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 4823550 - 4823622
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaa 205  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  4823550 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgtgtggagaaaattaataccaagtaatcaa 4823622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 30423541 - 30423420
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaac 232  Q
    |||||||||||| |||  |||| |||||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||  ||| ||||| |||||    
T  30423541 tgttgtgaattcattgcaaaaatcacaccaataaaacttgatgtgtggagcaaa-taaaaccaagcaatcaaatcaagcgggtgacaatataattcaaac 30423443  T
Q  233 aa----aaacagcaagagataaa 251  Q
    ||    |||||||||||||||||    
T  30423442 aaaaataaacagcaagagataaa 30423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 33032971 - 33032879
Alignment:
Q  146 gttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 236  Q
    |||| |||||| ||||||||||||  |||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||    
T  33032971 gttgtgaaaacgacaccaataaaaaacttgatgcatagagcaaattaatatcaagtaatcaaatcaagcgagtagcaaataattaaaacaaaa 33032879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 21034064 - 21034003
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  21034064 agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtatggggaaaagagca 21034003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 30423410 - 30423349
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  30423410 agaacacaaga-atttgtttaccctgttcggtctaatgatgacctactctggaggagagagca 30423349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 31162562 - 31162502
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||| || ||||||||||||||||||||| |||  |||||||||||||||| |||||    
T  31162562 agaacacacgaaatttgtttacccagttcggtccaatactgacctagtctgggggggagag 31162502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 26268218 - 26268280
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtct-gggggagagagca 334  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||||| ||| |||||||||    
T  26268218 agaacacaaga-atttgtttactcagttcggtctaatgattacctagtctagggagagagagca 26268280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 3005617 - 3005678
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||||||||||||| ||   |||||| |||||||||||||||||    
T  3005617 agaacacaaga-atttgtttacccagttcggtccaaaactgacctggtctgggggagagagca 3005678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 33032849 - 33032788
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| || ||| ||||||||||||||| ||||||||||||||||| || |||||||||    
T  33032849 agaacacaaaattttt-tttacccagttcggtttaatgatgacctagtctaggagagagagca 33032788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 31035470 - 31035406
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacc--tagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||||| |||  |||||  |||||||||||||||||||    
T  31035470 agaacacacgaaatttgtttacccagttcggtccaatactgacctatagtctgggggagagagca 31035406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 3276494 - 3276455
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgat 311  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  3276494 aagaacacaaga-atttgtttacccagttcggtctaatgat 3276455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 28228842 - 28228790
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaat 188  Q
    ||||||||||||||  |||| |||||||||||||||||||| |||||| ||||    
T  28228842 ttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtgtggagaaaat 28228790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 43079953 - 43079890
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  43079953 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 43079890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 43082324 - 43082261
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  43082324 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 43082261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 3874489 - 3874435
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||||    
T  3874489 tttgttgtgaattcgttga-aaaatcacaccaataacaacttgatgtgtggagcaa 3874435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 15073061 - 15072999
Alignment:
Q  272 agaacacaagata-tttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| ||| |||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  15073061 agaacacaaaataatttgttgacccagttcggtctaaat-tgacctagtctgggggagagagca 15072999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 2266935 - 2267039
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata-aaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaat-aatccaa 230  Q
    |||||||||||||||||  |||| |||||||||| |||||||||| || ||||||| ||| |||||  ||||||||||||| |||  ||||| ||| |||    
T  2266935 ttgttgtgaattcgttgcaaaaatcacaccaatataaacttgatgtgt-gagcaaa-taaaaccaaacaatcaaatcaagcaggtgacaaataaattcaa 2267032  T
Q  231 acaaaaa 237  Q
    |||||||    
T  2267033 acaaaaa 2267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 21482660 - 21482599
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||||| ||   ||||||||| ||||||||||||||    
T  21482660 agaacacacgaaatttgtttacccagttcggtccaa-attgacctagtttgggggagagagca 21482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 334
Target Start/End: Original strand, 29554803 - 29554833
Alignment:
Q  304 ctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||    
T  29554803 ctaatgatgacctagtctgggggagagagca 29554833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 31566555 - 31566601
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||    
T  31566555 atttgtttacccagttcggtccaatactgacctagtatgggggagag 31566601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 31578274 - 31578324
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||  ||  ||||||||||| ||||||||||||    
T  31578274 atttgtttacccagttcggtcctatactgacctagtctaggggagagagca 31578324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 28251410 - 28251463
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||    
T  28251410 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggagcaa 28251463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 9765912 - 9765865
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  9765912 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 9765865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 26403323 - 26403276
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  26403323 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 26403276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 132 - 334
Target Start/End: Original strand, 2917 - 3118
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2917 tttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 3016  T
Q  231 acaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    ||||||||||||||| |||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3017 acaaaaacagcaagaaataaa--agagagagagagggagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 3114  T
Q  331 agca 334  Q
    ||||    
T  3115 agca 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 54193557 - 54193360
Alignment:
Q  134 tgttgtgaattcgtt-gagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  54193557 tgttgtgaattcgtttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaaccaagcgggtagcaaataatccaaac 54193458  T
Q  233 aaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54193457 aaaaacagcaagagataaa----aggaagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 54193362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 6303643 - 6303443
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6303643 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 6303544  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||||||||||||                   ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  6303543 caaaaacagcaagagataaa--agagagagagagagagaaagaacacaagatatttgtttacccagtttggtttaatgatgacctagtctgggggagaga 6303446  T
Q  332 gca 334  Q
    |||    
T  6303445 gca 6303443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 10093923 - 10094123
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10093923 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 10094022  T
Q  233 aaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||||||||||||||                   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10094023 aaaaacagcaagagataaaagagagagagagagagagaaa-aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 10094121  T
Q  333 ca 334  Q
    ||    
T  10094122 ca 10094123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 10200805 - 10201003
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10200805 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 10200904  T
Q  233 aaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||||||||||||||                   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10200905 aaaaacagcaagagataaa---agagagagagagagagaaaaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 10201001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 22625828 - 22626032
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  22625828 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccaagtaatcaaaagaagcgggtagcaaataatccaaa 22625927  T
Q  232 caaaaacagcaagagataaa--nnnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    |||||||| |||||||||||                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22625928 caaaaacaacaagagataaaaggaagagagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 22626027  T
Q  330 gagca 334  Q
    |||||    
T  22626028 gagca 22626032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 54188842 - 54188643
Alignment:
Q  133 ttgttgtgaattcgtt-gagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54188842 ttgttgtgaattcgtttgagaaaaccacaccaataaaatttgatgcgtggagcaaattaataccaagtaatcaaaccaagcgggtagcaaataatccaaa 54188743  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    |||||||| |||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  54188742 caaaaacaacaagagataaa--aggaagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtct-ggggagaga 54188646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 10099923 - 10100042
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10099923 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 10100022  T
Q  232 caaaaacagcaagagataaa 251  Q
    ||||||||||||||||||||    
T  10100023 caaaaacagcaagagataaa 10100042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 10897337 - 10897139
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10897337 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggaacaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 10897238  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10897237 caaaaataaacagcaagagataaa-------aggaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggga 10897146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 27544619 - 27544504
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  27544619 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgttgagcaaattaatatcaagtaatcaaatcaagcgggtagcaaataatccaaac- 27544521  T
Q  234 aaaacagcaagagataa 250  Q
    |||||||||||||||||    
T  27544520 aaaacagcaagagataa 27544504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 5858874 - 5858678
Alignment:
Q  134 tgttgtgaattcg-ttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatc---ca 229  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  5858874 tgttgtgaattcgattgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaca 5858775  T
Q  230 aacaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    ||  ||||||||||||||||||                   |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  5858774 aaataaaacagcaagagataaa------aggaagagggagaaagaacacaaga-atttgttta-ccagttcggtctaatgatgacctagtctgggggaga 5858683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 11079847 - 11079724
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  11079847 tttgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagcaaataattcaaa 11079748  T
Q  232 caa----aaacagcaagagataaa 251  Q
    |||    |||||||||||||||||    
T  11079747 caaaagtaaacagcaagagataaa 11079724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 10594883 - 10595082
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa- 231  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  10594883 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatacgtggagtaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaa 10594982  T
Q  232 caaaa----acagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||||    |||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  10594983 caaaagtaaacagcaagagataaa------aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtatggggga 10595075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 29913804 - 29914003
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29913804 ttgttgtgaatt-gttgagaaaaccacaccaataacaaacttgatgtgtggagcagattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 29913902  T
Q  231 acaaaa----acagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||||    ||||||||||||| |                   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29913903 acaaaataaaacagcaagagataga------gagaagaaagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggg 29913995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 29897525 - 29897631
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 229  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  29897525 tttgttgtgaattcgttgagaaaaccacaccaataacaaacttgatgtgtggagcagattaataccaaataatcaaatcaagcgggtagcaaataatcca 29897624  T
Q  230 aacaaaa 236  Q
    |||||||    
T  29897625 aacaaaa 29897631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 10949115 - 10949308
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  10949115 tgttgtgaattcgctgtgaaaaccacatcaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagctcgtagcaaataattcaaaca 10949214  T
Q  234 aaaac----agcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    |||||    |||||||||||||                    ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  10949215 aaaactaacagcaagagataaaaggaagaagg----------agaacacaaga-atttgtttatccagttcagtctaatgatgacctagtctgggggaga 10949303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 20031169 - 20031365
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||| |||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20031169 ttgttgtgaattcgttgtgaaaaccacaccaataaaaaacatgatgcgtagagcaaattaataccaagtaatcaaatcaagcgggtagcgaataatccaa 20031268  T
Q  231 acaaaaac----agcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||||||    |||||||||||||                    ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  20031269 acaaaaacgaacagcaagagataaaaggaagaagg----------agaacacaaga-atttgtttacccagttcggtttaatgatgacctagtcttgggg 20031357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 10612626 - 10612826
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcc-aa 230  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||    
T  10612626 ttgttatgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccagataatcaaatcaagcgagtagcaaataatccaaa 10612725  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    ||| |||||||||||||                    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10612726 acaaaagtaaatagcaagagataaaaggaagagagagag------agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggg 10612818  T
Q  327 agagagca 334  Q
    ||||||||    
T  10612819 agagagca 10612826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 47882737 - 47882859
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||    
T  47882737 ttgttgtgaattcattgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaattaatcaaatcaagtgggtagtaaataattcaaac 47882836  T
Q  233 aa----aaacagcaagagataaa 251  Q
    ||    |||||||||||||||||    
T  47882837 aaaagtaaacagcaagagataaa 47882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 140 - 334
Target Start/End: Original strand, 47878033 - 47878219
Alignment:
Q  140 gaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa----a 235  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    |    
T  47878033 gaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaata-caagtaatcaaatcaagtgggtagcaaataattcaaacaaaagta 47878131  T
Q  236 aacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||                    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  47878132 aacagcaagagataaaaggaagaatg----------agaacacaaga-atttgtttacccagttcggtctaataatgacctagtctggaggagagagca 47878219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 3330221 - 3330098
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  3330221 tgttgtgaattcgttgtgaaaaccacaccaataacaaacttgatgcgcggagcaaattaataccaagtaatcaaatcaagcggatagcaaataactcaaa 3330122  T
Q  232 caa----aaacagcaagagataaa 251  Q
    |||    |||||||||||||||||    
T  3330121 caaaagtaaacagcaagagataaa 3330098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 48390152 - 48390350
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa---cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||||||  |||||||||||||   |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||    
T  48390152 tgttgtgaattcgttgagaaagtcacaccaataaaaaaacttgatgcgtggagcaaattaatatcaagtaatcaaatcaaacgggtaacaaataattcaa 48390251  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    |||||||||||||||||                    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  48390252 acaaaaacaaacagcaagagataaaaagggaagaagg--------agaacacaaga-atttgtttacccagttcggtttaatgatgacctagtctggggg 48390342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 333
Target Start/End: Original strand, 27761839 - 27762033
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||| ||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  27761839 ttgttgtaaattcgttgtgaaaaacacaccaataaaaacttgatgcatggagcaaattaatatcaactaatcaaatcaagcgggtagcaaataattcaaa 27761938  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  27761939 caaaagtaaacagcaagagataaa----------aggaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtttggggga 27762027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 4535946 - 4535842
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttga-tgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||  ||||||| |||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4535946 tgttgtgaattcgttgtaaaaaccagaccaataaaaatttaatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagcaaataatccaaac 4535847  T
Q  233 aaaaa 237  Q
    |||||    
T  4535846 aaaaa 4535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 166 - 322
Target Start/End: Complemental strand, 16462495 - 16462336
Alignment:
Q  166 aaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa----aaacagcaagagataaannnnnnnnnn 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    |||||||||||||||||              
T  16462495 aaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtatcaattaatccaaacaaaaataaacagcaagagataaaaggaagagag 16462396  T
Q  262 nnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctg 322  Q
             |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16462395 agagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctg 16462336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 10100080 - 10100140
Alignment:
Q  274 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10100080 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 10100140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 38003195 - 38003103
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataat 226  Q
    |||||||||||  |||  |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  38003195 tgttgtgaattgattgtaaaaaccacaccaataaaatttgacgcgtggagcaaattaataccaagtaatcaaataaagtgggtagcaaataat 38003103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 10207989 - 10208049
Alignment:
Q  274 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10207989 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgcgggagagagca 10208049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 27544469 - 27544406
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27544469 aagaacataagatatttgtttacccagttcggtctaatgatgacctagtctgagggagagagca 27544406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 7418378 - 7418306
Alignment:
Q  146 gttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 216  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  7418378 gttgtgaaaaccacaccaataataaacttgatgcgtggaacaaattaatacaaagtaatcaaatcaagcgggt 7418306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 4535810 - 4535748
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggg-ggagagagca 334  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4535810 agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggaggagagagca 4535748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 13893789 - 13893686
Alignment:
Q  135 gttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaac 232  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||| || |||||||| || ||  |||||||||||||||||  ||| ||||| |||||    
T  13893789 gttgtgaattcgttgtgaaaaacacaccaataaaaccttgatgcgttgaacaaattaaaactaaacaatcaaatcaagcgggtgacaatataattcaaac 13893690  T
Q  233 aaaa 236  Q
    ||||    
T  13893689 aaaa 13893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 272 - 331
Target Start/End: Complemental strand, 38003064 - 38003006
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  38003064 agaacacaaga-atttgtttacgcagttcggtctaatgatgacctagtctgagggagaga 38003006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 47882870 - 47882930
Alignment:
Q  273 gaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  47882870 gaacacaaga-atttgtttacccagttcgatctaatgatgacttagtctaggggagagagca 47882930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 11079713 - 11079651
Alignment:
Q  272 agaacacaagatatttgtttacccagtt-cggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  11079713 agaacacaaga-atttgtttacctaatttcggtctaatgatgacctagtctgggggagagagca 11079651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 1674226 - 1674176
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  1674226 atttgtttacccagttcggtctaatactgacctagtctggtggagagagca 1674176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 36871284 - 36871346
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||| ||||||||||||||||| |||  ||||||||||||||||||||||||    
T  36871284 agaacacacgaaattcgtttacccagttcggtccaatactgacctagtctgggggagagagca 36871346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 50494274 - 50494211
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  50494274 aagaacacaaagatatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 50494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 27421056 - 27420998
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaat 192  Q
    ||||||||||||| |||| |||| |||||||||||||||||||| || ||||||||||||    
T  27421056 ttgttgtgaattcattga-aaaatcacaccaataaaacttgatgtgttgagcaaattaat 27420998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 3330087 - 3330027
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||| ||||||    
T  3330087 agaacacaaga-atttgtgtacccagttcggtctaatgatgaccta-tttgggggacagagca 3330027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 7418247 - 7418198
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  7418247 atttgtttacccagttcggtctaatgatgacctactat-ggggagagagca 7418198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 458559 - 458496
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  458559 aagaacacaaagatatttgttgacccagttcggtccaacc-tgacctagtctgggggagagagca 458496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 747032 - 746969
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  747032 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 746969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 13893658 - 13893600
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    ||||||||||| || ||||||||||||||| |||||| |||||||| ||||||||||||||    
T  13893658 agaacacaaga-atatgtttacccagttcg-tctaataatgacctactctgggggagagag 13893600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 38210645 - 38210582
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||| ||||||||||||||    
T  38210645 aagaacacaaagatatttgttgacccagttcggtccaat-ctgacctagtatgggggagagagca 38210582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 16997209 - 16997150
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaa-acttgatgcgtggagcaaattaat 192  Q
    |||||| |||||| |||||||| |||||||||||| |||||||  |||||||||||||||    
T  16997209 tgttgtaaattcggtgagaaaatcacaccaataaatacttgatatgtggagcaaattaat 16997150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 28761423 - 28761473
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||| || ||   ||||||||||||||||||||||||    
T  28761423 atttgtttacccagttcgatccaaaattgacctagtctgggggagagagca 28761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 36871148 - 36871202
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaa-acttgatgcgtggagcaa 186  Q
    |||||||||||||||||| |||| |||||| ||||| |||||||| |||||||||    
T  36871148 ttgttgtgaattcgttgaaaaaatcacaccgataaatacttgatgtgtggagcaa 36871202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 53917660 - 53917709
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  53917660 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 53917709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 14634289 - 14634350
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaa--acttgatgcgtggagcaaattaata 193  Q
    |||||||||||||||||  ||||| ||||||||||||  |||||||| ||||| ||||||||||    
T  14634289 tttgttgtgaattcgtt--gaaaatcacaccaataaaatacttgatgtgtggaacaaattaata 14634350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 21334742 - 21334791
Alignment:
Q  282 atatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||| ||| ||||||| ||| |||||||| |||||||||||||    
T  21334742 atatttgtttatccaattcggtccaataatgacctactctgggggagaga 21334791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 1417573 - 1417526
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  1417573 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 1417526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 1736388 - 1736341
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  1736388 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 1736341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 6063428 - 6063491
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||  ||||||||||||| |||  ||||||||||||||||||||||||    
T  6063428 aagaacacaaagaaatttgtggacccagttcggtccaatc-tgacctagtctgggggagagagca 6063491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 8370569 - 8370522
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  8370569 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 8370522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 10621512 - 10621575
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||| ||||||||||||||||||||    
T  10621512 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgagctagtctgggggagagagca 10621575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 18552966 - 18552919
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  18552966 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 18552919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 21711227 - 21711274
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  21711227 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 21711274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 25389180 - 25389117
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  25389180 aagaacacaaagaaatttgttgacccagttcggtccaaat-tgacctagtctgggggagagagca 25389117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 25389329 - 25389273
Alignment:
Q  131 gtttgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    |||||||||||||||| ||| |||| || |||||||| ||||||||| |||||||||    
T  25389329 gtttgttgtgaattcgatgaaaaaatcataccaataacaacttgatgtgtggagcaa 25389273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 27975035 - 27974988
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  27975035 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 27974988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 27986529 - 27986482
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  27986529 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 27986482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 30709873 - 30709826
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  30709873 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 30709826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 53468302 - 53468349
Alignment:
Q  141 aattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||| |||||||||||||||||||  |||||||||| |||||||||    
T  53468302 aattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 53468349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 2e-65; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 2736537 - 2736338
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2736537 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtagagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 2736438  T
Q  233 a--aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    |  ||||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2736437 aaaaaaacagcaagagataaa----aggaagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 2736342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 45680055 - 45679856
Alignment:
Q  133 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45680055 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 45679956  T
Q  231 acaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    |||||||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45679955 acaaaaacagcaagagataaa----agagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 45679860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 33670817 - 33671015
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33670817 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggatcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 33670916  T
Q  233 -aaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
     |||||||||||||| ||||                   ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33670917 aaaaaacagcaagaggtaaa----aggaagagagagagaaagaacacaagatatttgtttacgcagttcggtctaatgatgacctagtctgggggagaga 33671012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 39680378 - 39680178
Alignment:
Q  133 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39680378 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 39680279  T
Q  231 aca-aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    ||| ||||||||||||| ||||                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39680278 acaaaaaacagcaagagttaaaggagagagagagagag----agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 39680183  T
Q  330 gagca 334  Q
    |||||    
T  39680182 gagca 39680178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 129 - 334
Target Start/End: Complemental strand, 39687326 - 39687116
Alignment:
Q  129 gtgtttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataat 226  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39687326 gtgtctgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataat 39687227  T
Q  227 ccaaaca-aaaacagcaagagataaa--nnnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgg 323  Q
    ||||||| ||||||||||||| ||||                     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39687226 ccaaacaaaaaacagcaagagttaaaggagagagagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgg 39687127  T
Q  324 gggagagagca 334  Q
    |||||||||||    
T  39687126 gggagagagca 39687116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 146 - 334
Target Start/End: Complemental strand, 2741260 - 2741074
Alignment:
Q  146 gttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca--aaaacagcaa 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  2741260 gttgagaaaaccacaccaataaaacttgatgcgtagagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaaaacagcaa 2741161  T
Q  244 gagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||                   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2741160 gagataaa----aggaagagagagagaaagaacacaagatatttgtttacctagttcggtctaatgatgacctagtctgggggagagagca 2741074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 27517491 - 27517687
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27517491 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 27517590  T
Q  234 a----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    |    ||||| |||||||||||                   |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  27517591 aaaataaacaacaagagataaa-------gggaagaagaagaagaacacaaga-atttgtttaccaagttcggtctaatgatgacctagtctgggggaga 27517682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 17462768 - 17462569
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |    
T  17462768 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccgagtaatcaaatcaagcgggtagcaattaatccaca 17462669  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    | |||||||||||| |||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17462668 c-aaaacagcaagaaataaa--agagagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 17462572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 133 - 322
Target Start/End: Original strand, 22717082 - 22717274
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22717082 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatccaaac 22717181  T
Q  233 aa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctg 322  Q
    ||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22717182 aaaaataaacagcaagagataaaaggaagagagagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctg 22717274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 134 - 322
Target Start/End: Original strand, 22712374 - 22712565
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  22712374 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtatcaattaatccaaaca 22712473  T
Q  234 a----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctg 322  Q
    |    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22712474 aaaataaacagcaagagataaaaggaagagagagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctg 22712565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 17943867 - 17943669
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17943867 tgttgtgaattcgttgagaaaaacacaccaataacaaacttgatgcgtggagcaaattaataccaagtaatcaaattaagcgggtagcaaataatccaaa 17943768  T
Q  232 ca---aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggag 328  Q
    ||   |||||||||||||||| |                   |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  17943767 caaataaaacagcaagagataga------gggaagaaagagaaagaacacaaga-atttgtttacctagttcggtctaatgatgacctagtctgggggag 17943675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 20054609 - 20054813
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa---cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 229  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20054609 ttgttgtgaattcgttgagaaaaccacaccaataaaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcggatagcaaataatcca 20054708  T
Q  230 aa-caaaa----acagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggg 324  Q
    || |||||    |||||||||||||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  20054709 aaacaaaagtaaacagcaagagataaa----aggaagaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggt 20054803  T
Q  325 ggagagagca 334  Q
    ||||||||||    
T  20054804 ggagagagca 20054813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 136 - 334
Target Start/End: Original strand, 12781075 - 12781269
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa 234  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781075 ttgtgaattcgttgagaaaaccataccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa 12781174  T
Q  235 aaa-cag-caagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||  || |||||||||||                   |||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12781175 aaagtagacaagagataaa------aggaagagagagaaagaacacaata-atttgtttacctagttcggtctaatgatgacctagtctgggggagagag 12781267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 38191346 - 38191242
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38191346 ttgttgtgaattcgttgtgaaaatcacaccaataaaacttaatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaac 38191247  T
Q  233 aaaaa 237  Q
    |||||    
T  38191246 aaaaa 38191242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 20049866 - 20050070
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa---cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  20049866 tgttgtgaattcgttgagaaaaccacaccaataaaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaatcggatagcaaataatccaa 20049965  T
Q  231 a-caaaa----acagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtct-ggg 324  Q
    | |||||    |||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  20049966 aacaaaagtaaacagcaagagataaa----aggaagaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggg 20050060  T
Q  325 ggagagagca 334  Q
    ||||||||||    
T  20050061 ggagagagca 20050070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 136 - 334
Target Start/End: Complemental strand, 30479322 - 30479128
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa- 234  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||| ||||||| || || ||||||||||||| ||||||||||||||||||||||     
T  30479322 ttgtgaatttgttgagaaaaccacatcaataatacttgatgcgtggagtaaattaacacaaaataatcaaatcaagtgggtagcaaataatccaaacaaa 30479223  T
Q  235 ---aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
       |||||||||||||||||                   ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30479222 aataaacagcaagagataaa-------aggaagaagaagaagaatacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggagaga 30479131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 37170606 - 37170729
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  37170606 ttgttgtgaattcgttgtgaaaatcacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagtaaataattcaaa 37170705  T
Q  232 caa----aaacagcaagagataaa 251  Q
    |||    |||||||||||||||||    
T  37170706 caaaagtaaacagcaagagataaa 37170729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 38191207 - 38191146
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38191207 agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctaggggagagagca 38191146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 40699645 - 40699583
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||| |||||||||||||  ||||||||||||||||| ||||||    
T  40699645 agaacacacgaaatttgtttacctagttcggtctaatactgacctagtctgggggaaagagca 40699583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 8173599 - 8173539
Alignment:
Q  273 gaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagc 333  Q
    ||||||| || ||||||||||||||||||||| |||  ||||||||| |||||||||||||    
T  8173599 gaacacacgaaatttgtttacccagttcggtccaatactgacctagtatgggggagagagc 8173539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 28458815 - 28458874
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||| ||| ||||||||||    
T  28458815 agaacacaagaaatt-gtttacccagtttggtctaatgatgacctactctaggggagagag 28458874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 35215570 - 35215633
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  35215570 aagaacacaaagatatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 35215633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 35217947 - 35218010
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  35217947 aagaacacaaagatatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 35218010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 45332165 - 45332228
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  45332165 aagaacacaaagatatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 45332228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 34575134 - 34575184
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||| || |||| ||||||||||||||||||||||||    
T  34575134 atttgtttacctagttcgatccaatgctgacctagtctgggggagagagca 34575184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 20592348 - 20592288
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||| || ||||||||| ||| ||||||| |||  ||||||||||||||||||||||    
T  20592348 agaacacacgaaatttgtttatccaattcggtccaatactgacctagtctgggggagagag 20592288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 17897231 - 17897292
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||| | |||  ||||||||||| ||||||||||||    
T  17897231 agaacacacgaaatttgtttacccagttcggaccaatactgacctagtct-ggggagagagca 17897292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 28458692 - 28458751
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaat----aaaacttgatgcgtggagcaaat 188  Q
    ||||||||||||| ||| |||||||||||||||    |||||||||||||| ||||||||    
T  28458692 ttgttgtgaattcattgtgaaaaccacaccaataaaaaaaacttgatgcgtagagcaaat 28458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 36558862 - 36558911
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  36558862 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 36558911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 36561139 - 36561188
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  36561139 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 36561188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 42064772 - 42064722
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  42064772 atttgttgacccagttcggtccaaatttgacctagtctgggggagagagca 42064722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 22287179 - 22287234
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    ||||||||||||||| |||||||| ||||||||||  |||||||||| |||||||||    
T  22287179 tttgttgtgaattcgatgagaaaa-cacaccaataacaaacttgatgtgtggagcaa 22287234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 42923291 - 42923346
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||    
T  42923291 tttgttgtgaattcgttgtgaaaa-cacaccaataacaaacttgatgtgtggagcaa 42923346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 42923349 - 42923404
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||    
T  42923349 tttgttgtgaattcgttgtgaaaa-cacaccaataacaaacttgatgtgtggagcaa 42923404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 1345634 - 1345587
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  1345634 ttgttgacccagttcggtccaat-atgacctactctgggggagagagca 1345587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 2838123 - 2838076
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  2838123 ttgttgacccagttcggtccaat-atgacctactctgggggagagagca 2838076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 7462789 - 7462844
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaaa 187  Q
    ||||| ||||||||||||||||||||| | |||  |||||||||| ||||||||||    
T  7462789 tgttgcgaattcgttgagaaaaccacatcgataacaaacttgatgtgtggagcaaa 7462844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 11578095 - 11578155
Alignment:
Q  274 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||| || ||||||||||| ||||||||||||   ||| ||||||||||||| ||||||    
T  11578095 aacacacgaaatttgtttacctagttcggtctaaaactgatctagtctgggggaaagagca 11578155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 13569332 - 13569379
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  13569332 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 13569379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 14699100 - 14699053
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  14699100 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 14699053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 20522224 - 20522271
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  20522224 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 20522271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 9e-64; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 15831478 - 15831275
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15831478 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 15831379  T
Q  233 aaaaacagcaagagataaa--nnnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    |||||||||||||||||||                     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15831378 aaaaacagcaagagataaaagaaagagagagagagagagaaagaacacaagatatttgtttatccagttcggtctaatgatgacctagtctgggggagag 15831279  T
Q  331 agca 334  Q
    ||||    
T  15831278 agca 15831275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 132 - 334
Target Start/End: Complemental strand, 18587300 - 18587100
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18587300 tttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaa 18587201  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18587200 acaaaaataaacagcaagagataaa------aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggg 18587108  T
Q  327 agagagca 334  Q
    ||||||||    
T  18587107 agagagca 18587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 11853898 - 11853778
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11853898 ttgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgggtggagcaaattaataccaagcaatcaaatcaagcgggtagcaaataatccaa 11853799  T
Q  231 acaaaaacagcaagagataaa 251  Q
    |||||||||||||||||||||    
T  11853798 acaaaaacagcaagagataaa 11853778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 8529601 - 8529401
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcc-aa 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  8529601 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaatagtccaaa 8529502  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8529501 acaaaagtaaacagcaagagataaa------aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggg 8529409  T
Q  327 agagagca 334  Q
    ||||||||    
T  8529408 agagagca 8529401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 15312650 - 15312526
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15312650 ttgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 15312551  T
Q  231 acaa----aaacagcaagagataaa 251  Q
    ||||    |||||||||||||||||    
T  15312550 acaaaagtaaacagcaagagataaa 15312526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 4555915 - 4556108
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  4555915 tgttgtgaatttgttgagaaaaccacaccaataaaatttgatgcgtggagcaaattaataccaaataatcaaatcaagcgggtagcaattaatccaaaca 4556014  T
Q  234 a----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    |    |||||||||||||||||                    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  4556015 aaagtaaacagcaagagataaaaggaagaaag----------agaacacaaga-atttgtttacccagttcggtttaatgatgacctagtctgggggaga 4556103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 132 - 334
Target Start/End: Original strand, 16688792 - 16688988
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  16688792 tttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaatatcaagtaatcgaatcaagcgggtagcaaataatccaa 16688891  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    |||||||||||||||||                    ||||||||||| |||||||||||||||||||||||||||||||||||| || |||    
T  16688892 acaaaagtaaacagcaagagataaaaggaagaaag----------agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtttgtggg 16688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 4570421 - 4570228
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4570421 ttgttgtgaattcgttttgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaac 4570322  T
Q  233 aa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggag 328  Q
    ||    ||||| |||||||||||                   |||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||    
T  4570321 aatagtaaacaacaagagataaa----------aggaagaagaagaacacaaga-atttgtttacacagttcggtctaatgatgacc-agtctgggggag 4570234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 7050123 - 7050246
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  7050123 tttgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagttatcaaatcaagcgggtagcatataattcaaa 7050222  T
Q  232 caa----aaacagcaagagataaa 251  Q
    |||    |||||||||||||||||    
T  7050223 caaaattaaacagcaagagataaa 7050246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 15317290 - 15317092
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  15317290 tgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcatggagcaaatgaataccaagtaatccaatcaagcgggtagcaaataatccaaa 15317191  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15317190 caaaagtaaacagcaagagataaa------aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtct-gggga 15317099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 4558640 - 4558445
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||    
T  4558640 ttgttgtgaattcgttgagaaaaccacaccaataataaacttgatgcgtggagcaaattattaccaagtaatcaaatcaagcgggtatcaaataattcaa 4558541  T
Q  231 acaaa----aacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    |||||    ||||||||||||||||                   ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  4558540 acaaaaattaacagcaagagataaa----------aggaaaaagaagaacacatga-atttgtttacccagttcggtctaatgatgacc-agtctggggg 4558453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 4885203 - 4885008
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4885203 ttgttgtgaattcgttgtaaaaatcacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtaacaaataatccaaa 4885104  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    ||| | |||||||||||                    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4885103 caaaggtaaataacaagagataaaaggaagaaag----------agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggga 4885015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 16489681 - 16489583
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16489681 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaatcaagcgggtagcaaataatccaaa 16489583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 55822592 - 55822398
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  55822592 ttgttgtgaattcgttgagaaaactataccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaatcaggcgggtagcaattaatccaaa 55822493  T
Q  232 ca-aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    || ||||||||||||||||||                    | |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  55822492 caaaaaacagcaagagataaaagagagagagag--------aaaacacaagatatttgtttacccagttcggtctaatgatgacctagtat-ggggagag 55822402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 47566822 - 47566717
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||    
T  47566822 ttgttgtgaattctttgagaaaaccacaccaataataaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcggatatcaaataattcaa 47566723  T
Q  231 acaaaa 236  Q
    ||||||    
T  47566722 acaaaa 47566717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 36771725 - 36771621
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||| |||| |||||||||| ||||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  36771725 tgttgtgaatttgttgtgaaaaccacaacaataataaacttgatgcgttgagcaaattaataccaaataatcaaatcaagcgggtagcaaataattcaaa 36771626  T
Q  232 caaaa 236  Q
    |||||    
T  36771625 caaaa 36771621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 36769803 - 36769704
Alignment:
Q  139 tgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 236  Q
    ||||||||||| |||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  36769803 tgaattcgttgtgaaaaccacaccaataataaacttgatgcgtgaagcaaattaatatcaagtaatcaaatcaagtgggtagcaaataattcaaacaaaa 36769704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 11853742 - 11853682
Alignment:
Q  274 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853742 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 11853682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 36769674 - 36769613
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36769674 agaacacaaga-atttgtttatccagttcggtctaatgatgacctagtctgggggagagagca 36769613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 25613943 - 25614004
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25613943 agaacacaaga-atttgtttacctagttcggtctaatgatgacctactctgggggagagagca 25614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 15312500 - 15312453
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15312500 atttgtttacctagttcggtctaatgatgacctagtctgggggagaga 15312453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 31300607 - 31300558
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31300607 atttgtttacccagttcggtctaatgatgacctagtct-ggggagagagca 31300558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 36771591 - 36771530
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  36771591 agaacacaaga-atttgtttacctagttcggtctaatgatgacctagtctggcgtagagagca 36771530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 31300733 - 31300677
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaat-aaaacttgatgcgtggagcaaat 188  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  31300733 ttgttatgaattcgttgagaaaaccacaccaataaaaacttgatgcgtgaagcaaat 31300677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 16185820 - 16185882
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||||| ||   ||||||||||||||||||||||||    
T  16185820 agaacacacgaaatttgtttacccagttcggtccaaaactgacctagtctgggggagagagca 16185882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 7050269 - 7050305
Alignment:
Q  298 ttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||||||    
T  7050269 ttcggtctaatgatgacctagtctgggggagagagca 7050305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 22780357 - 22780420
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  22780357 aagaacacaaagatatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 22780420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 28454031 - 28453971
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||| || ||||||||||||||||||||| |||  | ||||||||||||||||||||    
T  28454031 agaacacacgaaatttgtttacccagttcggtccaatactaacctagtctgggggagagag 28453971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 44599822 - 44599885
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  44599822 aagaacacaaagatatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 44599885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 3578669 - 3578716
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||    
T  3578669 atttgtttacccagttcggtctaatactggcctagtctgggggagaga 3578716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 4874336 - 4874410
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatca 209  Q
    ||||||||||||||||  |||| |||||||| ||||||||||  |||||||| ||||| |||||| ||||||||||    
T  4874336 tgttgtgaattcgttgcaaaaatcacaccaacaaaacttgatatgtggagcatattaa-accaagcaatcaaatca 4874410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 31300681 - 31300629
Alignment:
Q  203 caaatcaagcgggtagcaaataatccaaacaa----aaacagcaagagataaa 251  Q
    ||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  31300681 caaatcaagcgggtagcaaataatccaaacaaaagtaaacagcaagagataaa 31300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 10114665 - 10114603
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||| | ||||||| |||  ||||||||||||||||||||||||    
T  10114665 agaacacatgaaatttgtttacctaattcggtccaatactgacctagtctgggggagagagca 10114603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 16489532 - 16489483
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  16489532 atttgtttacctagttcggtctaatgatgacctagtct-agggagagagca 16489483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 32273806 - 32273860
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaat 188  Q
    ||||||||||||||||  |||| ||||||||||||||||||||  ||||||||||    
T  32273806 tgttgtgaattcgttgcaaaaatcacaccaataaaacttgatgtctggagcaaat 32273860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 9864060 - 9864000
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||| || ||||||||||||||||||||| |||  |||| ||||||||||| |||||    
T  9864060 agaacacacgaaatttgtttacccagttcggtccaatactgacttagtctgggggggagag 9864000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 16931773 - 16931836
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  16931773 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 16931836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 16934127 - 16934190
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  16934127 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 16934190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 18709148 - 18709211
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  18709148 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 18709211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 22782722 - 22782785
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| | ||||||||||| |||  ||||||||||||||||||||||||    
T  22782722 aagaacacaaagatatttgttgatccagttcggtccaatc-tgacctagtctgggggagagagca 22782785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 25613810 - 25613915
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt-agcaaataatccaa 230  Q
    |||| |||||||||||  ||||| ||||||||||||  ||||||| || ||||||||||| |||||  ||||||||||||| ||| |  ||||||| |||    
T  25613810 tgttatgaattcgttgcaaaaac-acaccaataaaaaacttgatgtgttgagcaaattaaaaccaaacaatcaaatcaagcaggtgaaaaaataattcaa 25613908  T
Q  231 acaaaaa 237  Q
    |||||||    
T  25613909 acaaaaa 25613915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 36378641 - 36378579
Alignment:
Q  272 agaacacaagata-tttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| ||| |||||||||||||||||||| ||   ||||||||||||||||||||||||    
T  36378641 agaacacaaaataatttgtttacccagttcggtccaaat-tgacctagtctgggggagagagca 36378579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 47563248 - 47563194
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    ||||||||||| | |||||||||||||||||||  |||||||||| |||||||||    
T  47563248 tgttgtgaatttgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 47563194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 47566676 - 47566636
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  47566676 atttgtttacc--gttcggtctaatgatgacctagtctggggg 47566636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 9148587 - 9148538
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  9148587 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 9148538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 16185685 - 16185746
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaa--acttgatgcgtggagcaaattaat 192  Q
    |||||||||||||||||| || | ||||||||||||  ||||||||  ||||||||||||||    
T  16185685 ttgttgtgaattcgttgaaaagatcacaccaataaaatacttgatgtatggagcaaattaat 16185746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 16455588 - 16455528
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  16455588 agaacacaaga-atttgttgacccagttcggtccaaat-tgacctagtctgggggagagagca 16455528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 16639011 - 16638965
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    ||||||||||||||||| ||||||| |||||||| |||||| |||||    
T  16639011 atttgtttacccagttcagtctaattatgacctactctgggagagag 16638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 16639155 - 16639075
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgg 214  Q
    ||||||||||||| |||  ||||| | |||||||||| ||||||| |||||||||| ||| |||||| |||||||||||||||    
T  16639155 ttgttgtgaattctttgcaaaaac-ataccaataaaaacttgatgtgtggagcaaa-taaaaccaagcaatcaaatcaagcgg 16639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 18537471 - 18537521
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||| ||  |||||||| | ||||||||||||||    
T  18537471 atttgtttacccagttcggtcaaaaaatgacctattatgggggagagagca 18537521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 19323030 - 19322980
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| ||||||||||| ||   ||||||||||||||||||||||||    
T  19323030 atttgtttatccagttcggtccaaaactgacctagtctgggggagagagca 19322980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 22295513 - 22295451
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||| ||| |||  || |||||| ||||||||||||||    
T  22295513 agaacacatgaaatttgtttacccagttcagtccaatactgccctagtgtgggggagagagca 22295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 25357978 - 25357928
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||| |||| |||  ||||||||||| ||||||||||||    
T  25357978 atttgtttacccagttaggtccaatactgacctagtctaggggagagagca 25357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 26557921 - 26557871
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||| |||  |||| |||||||||||||||||||    
T  26557921 atttgtttacctagttcggtccaatactgacttagtctgggggagagagca 26557871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 38890210 - 38890272
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||||| ||   ||||||| ||| ||||||||||||    
T  38890210 agaacacacgaaatttgtttacccagttcggtccaaaactgacctaatcttggggagagagca 38890272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 14789414 - 14789473
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||||||| ||||||| ||||||||||||| ||   ||||||||||||||||||||||    
T  14789414 aagaacacaaga-atttgttgacccagttcggtccaaat-tgacctagtctgggggagagag 14789473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 16631512 - 16631425
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa 221  Q
    |||||||||||| ||||  ||||| | |||||||||| |||||| | |||||||||| || |||||| ||||||||||||||||| ||||    
T  16631512 ttgttgtgaatttgttgcaaaaacaa-accaataaaaacttgatccatggagcaaataaa-accaagaaatcaaatcaagcgggtggcaa 16631425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 18709003 - 18709056
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    ||||||||||| | ||| |||||||||||||||| ||||||||| |||||||||    
T  18709003 tgttgtgaatttgatgaaaaaaccacaccaataacaacttgatgtgtggagcaa 18709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 40637566 - 40637513
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    ||||| |||||||||||||| | ||||||||||| ||||||||| |||||||||    
T  40637566 tgttgcgaattcgttgagaatatcacaccaataacaacttgatgtgtggagcaa 40637513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 47150878 - 47150935
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    ||||||||||| ||| ||||||||| ||||||| |||  ||||||||||| |||||||    
T  47150878 agaacacaagaaattagtttacccaattcggtccaatattgacctagtctaggggaga 47150935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 10047383 - 10047430
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  10047383 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 10047430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 15032531 - 15032595
Alignment:
Q  271 aagaacacaagatatttgtttaccc-agttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| || |||||| ||||| ||||||||| |||  ||||||||| ||||||||||||||    
T  15032531 aagaacacacgaaatttgtataccctagttcggtccaatactgacctagtttgggggagagagca 15032595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 16631367 - 16631319
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    ||||| ||||||||||  ||||||| |||||||| ||||||||||||||    
T  16631367 atttgattacccagtttagtctaattatgacctactctgggggagagag 16631319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 18311214 - 18311269
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||| ||| |||| ||||||||||  |||||||||| |||||||||    
T  18311214 ttgttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtggagcaa 18311269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 18409191 - 18409246
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||| ||| |||| ||||||||||  |||||||||| |||||||||    
T  18409191 ttgttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtggagcaa 18409246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 39245998 - 39246045
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  39245998 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 39246045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 4e-63; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 8378357 - 8378552
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  8378357 tgttgtgaattcgttgagaaaaccagaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaattaagcgggtagcaaataatccaaac- 8378455  T
Q  234 aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagc 333  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8378456 aaaacagcaagagataaa----aggaagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagc 8378551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 15540843 - 15541044
Alignment:
Q  133 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  15540843 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaaacaagcggatagcaaataatccaa 15540942  T
Q  231 acaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    |||||||||||||| ||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15540943 acaaaaacagcaagcgataaa--agagagagagagagaaaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 15541040  T
Q  331 agca 334  Q
    ||||    
T  15541041 agca 15541044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 25405746 - 25405627
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405746 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 25405647  T
Q  232 caaaaacagcaagagataaa 251  Q
    ||||||||||||||||||||    
T  25405646 caaaaacagcaagagataaa 25405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 133 - 331
Target Start/End: Complemental strand, 25351684 - 25351488
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25351684 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 25351585  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25351584 caaaagtaaacagcaagagataaa------aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggga 25351492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 7070127 - 7070008
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7070127 ttgttgtgaattcgtagagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 7070028  T
Q  233 a-aaaacagcaagagataaa 251  Q
    | ||||||||||||||||||    
T  7070027 aaaaaacagcaagagataaa 7070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 3319869 - 3319988
Alignment:
Q  134 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3319869 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatccaaa 3319968  T
Q  232 caaaaacagcaagagataaa 251  Q
    ||||||||||||||||||||    
T  3319969 caaaaacagcaagagataaa 3319988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 7075127 - 7075009
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7075127 tgttgtgaattcgtagagaaaatcacaccaataaaacttgatgcgtggagaaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 7075028  T
Q  234 -aaaacagcaagagataaa 251  Q
     ||||||||||||||||||    
T  7075027 aaaaacagcaagagataaa 7075009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 2075437 - 2075249
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2075437 ttgttgtgaattcgttgagaaa--cacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaaacaagcgggtagcaaataatccaa 2075340  T
Q  231 acaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    ||||||| ||||||||||||                     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2075339 acaaaaatagcaagagataa------------ggaggaaggagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggagag 2075253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 136 - 334
Target Start/End: Original strand, 34546734 - 34546928
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa- 234  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||     
T  34546734 ttgtgaatttgttgagaaaaccacaccaataaaacttgatgcgtggaacaaattaatatcaagtaatcaaattaagcgggtagcaaataatccaaacaaa 34546833  T
Q  235 ---aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
       |||||||||||| ||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34546834 aataaacagcaagaggtaaa-------aggaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggagaga 34546925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 3324636 - 3324756
Alignment:
Q  133 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  3324636 ttgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatgcaa 3324735  T
Q  231 acaaaaacagcaagagataaa 251  Q
    ||||||||| |||||||||||    
T  3324736 acaaaaacaacaagagataaa 3324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 30247303 - 30247198
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30247303 tgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcgcggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 30247204  T
Q  232 caaaaa 237  Q
    ||||||    
T  30247203 caaaaa 30247198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 7464364 - 7464567
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7464364 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaattaatccaaa 7464463  T
Q  232 caaa---------aacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctg 322  Q
     |||         ||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7464464 aaaaaaaaaaaaaaacagcaagagataaaaggaagaagaag-------aagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctg 7464555  T
Q  323 ggggagagagca 334  Q
    ||| ||||||||    
T  7464556 gggaagagagca 7464567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 44143722 - 44143843
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44143722 tgttgcgaattcgttgtgaaaaccacaccaataaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaaca 44143821  T
Q  234 a----aaacagcaagagataaa 251  Q
    |    |||||||||||||||||    
T  44143822 aaagtaaacagcaagagataaa 44143843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 44016513 - 44016709
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||    
T  44016513 ttgttgtgaattcgttgtgaaaaccacaccaataataaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtggatagcaaataattaaa 44016612  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    ||||| |||||||||||                    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  44016613 acaaaagtaaacaacaagagataaaaggaagaagg----------agaacacaaga-atttgtttacccaattcggtctaatgatgacctagtctggggg 44016701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 331
Target Start/End: Complemental strand, 25357379 - 25357182
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| ||    
T  25357379 ttgttgtcaattcgttgagaaaaccacaccaataacaaacttgatgtgtggagcaaaataatatcaagtaatcaaatcaagcgggtagcaaataatcaaa 25357280  T
Q  231 aca----aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    | |    |||||||||||||||| |                   ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25357279 agaaaataaaacagcaagagataga------aggaagagagagaaaggacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggg 25357187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 136 - 334
Target Start/End: Complemental strand, 25410463 - 25410264
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||| |||||||||| ||||| |||||  ||||||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  25410463 ttgtgaatttgttgagaaaatcacactaataacaaacttgatgtgttgagcaaaataatatcaagtaatcaaatcaagcgggtagcaaataatccaaaca 25410364  T
Q  234 ----aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
        |||||||||||||||| |                   ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25410363 aaataaaacagcaagagataga----aggaagagagagagaaaggacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggaga 25410269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 2121229 - 2121033
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaata-aaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| || |||||| ||||||||||    
T  2121229 tgttgtgaattcgttgagaaa--cacaccaatataaacttgatgtgtggagcaaattaataccaagcaatcaaatcaagtggatagcaattaatccaaac 2121132  T
Q  233 a-----aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |     ||||||||||||||||||                   | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  2121131 aaaagtaaaacagcaagagataaa-------aggaagaagaagatgaacacaaga-atttgtttacccaattcggtctaatgatgacctagtctggggga 2121040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 44010602 - 44010798
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||  |||||| ||||||||||  || ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||    
T  44010602 ttgttgtgaattcgttctgaaaactacaccaataataaatttgatgcatggagcaaattaatatcaagtaatcaaatcaagcggatagcaaataattcaa 44010701  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    |||||||||||||||||                    ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  44010702 acaaaagtaaacagcaagagataaaaggaagaagg----------agaacacaata-atttgtttaccaagttcggtctaatgatgacctagtctggggg 44010790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 25405589 - 25405526
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405589 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 25405526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 3320037 - 3320099
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3320037 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 3320099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 3324785 - 3324847
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3324785 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 3324847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 7069976 - 7069913
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7069976 aagaacacaaaatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 7069913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 42006993 - 42006888
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||| | |||||||| || |||||  ||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||| |||    
T  42006993 ttgttgtgaattcgtagtgaaaaccatacaaataataaacttgatgcgtgaagcaaattaatacaaagtaatcaaatcaagcgagtatcaaataattcaa 42006894  T
Q  231 acaaaa 236  Q
    ||||||    
T  42006893 acaaaa 42006888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 7074983 - 7074924
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7074983 aagaacacaagatatttgtttacccggttcggtctaatgatgacctagtctgggggagag 7074924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 21369970 - 21369888
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 216  Q
    ||||||||||| || ||||| ||||| |||||  || |||||||||||||||||||||||| |||||||||||||||||||||    
T  21369970 ttgtgaattcggtgtgaaaagcacactaataataaatttgatgcgtggagcaaattaatactaagtaatcaaatcaagcgggt 21369888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 44512361 - 44512423
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaat--aaaacttgatgcgtggagcaaattaat 192  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  44512361 tttgttgtgaattcgttgagaaaaacacaccaataaaaaacttgatgcgtggagcaaattaat 44512423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 30247166 - 30247104
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  30247166 aagaacacaata-atttgtttacccagtttggtctaatgatgacctagtctgggggagatagca 30247104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 42006847 - 42006797
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  42006847 atttgtttacgcagttcggtctaatgatgacctagtctgggagagagagca 42006797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 44512515 - 44512573
Alignment:
Q  274 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  44512515 aacacaaga-atttgtttacccagttcggtctaatgatgacctagtct-agggagagagca 44512573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 11081802 - 11081752
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  11081802 atttgtttacccagttcggtccaatattgacctagtctgggggagagagca 11081752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 24749036 - 24748981
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  24749036 ttgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 24748981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 331
Target Start/End: Complemental strand, 6332525 - 6332466
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    |||||||| || ||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  6332525 agaacacacgaaatttgtttacccagttcggtccaatactgacctagtctaggggagaga 6332466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 21369834 - 21369776
Alignment:
Q  276 cacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| | ||||||||||||||||||| |||||||||||| | ||| ||||||||||    
T  21369834 cacaagaaaattgtttacccagttcggtccaatgatgacctactatggcggagagagca 21369776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 44143854 - 44143914
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  44143854 agaacgcaaga-atttgtttatccaattcggtctaatgatgacctagtct-ggggagagagca 44143914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 2935573 - 2935510
Alignment:
Q  271 aagaacacaag-atatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| | ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  2935573 aagaacacaaggaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 2935510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 9027178 - 9027241
Alignment:
Q  271 aagaacaca-agatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| ||| ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  9027178 aagaacacatagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 9190101 - 9190054
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  9190101 ttgttgacccagttcggtccaat-atgacctagtctgggggagagagca 9190054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 28617318 - 28617271
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  28617318 ttgtttacccagttcggtccaat-atgacctactctgggggagagagca 28617271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 31155895 - 31155958
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  31155895 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 31155958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 6067196 - 6067246
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||| ||||| |||  ||||||||| ||||||||||||||    
T  6067196 atttgtttacccagtccggtccaatactgacctagtatgggggagagagca 6067246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 13290459 - 13290517
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    |||||||| || ||||||||||||||||||||| |||  ||||| |||||| |||||||    
T  13290459 agaacacacgaaatttgtttacccagttcggtccaatactgaccaagtctgagggagag 13290517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 22108357 - 22108308
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  22108357 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 22108308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 22137368 - 22137319
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  22137368 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 22137319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 24813495 - 24813545
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||| ||   ||||||||||||||||||| ||||    
T  24813495 atttgtttacccagttcggtccaaaactgacctagtctgggggagaaagca 24813545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 40550117 - 40550068
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  40550117 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 40550068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 40552395 - 40552346
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  40552395 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 40552346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 444045 - 443989
Alignment:
Q  133 ttgttgtgaattcgttgagaaaac-cacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||| ||||||||| ||||||||||  |||||||||| |||||||||    
T  444045 ttgttgtgaattcgatgagaaaactcacaccaataacaaacttgatgtgtggagcaa 443989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 1606684 - 1606621
Alignment:
Q  271 aagaacacaag-atatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| | ||||||| ||||||||||||| |||  ||| ||||||||||||||||||||    
T  1606684 aagaacacaaggaaatttgttgacccagttcggtccaatc-tgatctagtctgggggagagagca 1606621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 2580394 - 2580441
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||| ||||||| ||| |||||||||||||||||||||||||    
T  2580394 ttgttgacccaattcggtccaat-atgacctagtctgggggagagagca 2580441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 7351636 - 7351699
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||| ||||||||||||||    
T  7351636 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtatgggggagagagca 7351699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 20284093 - 20284140
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  20284093 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 20284140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 21983288 - 21983335
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  21983288 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 21983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 33332543 - 33332496
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| |||||||||| |||||| |||||||| ||||||||||||||||    
T  33332543 ttgttgacccagttcgatctaat-atgacctaatctgggggagagagca 33332496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 4e-63; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 13883806 - 13883608
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13883806 tgttgtgaattcgttgagaaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaaacgggtagcaaataatccaaa 13883707  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883706 caaaaacagcaagagataaaagagagagagagagat----agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 13883611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 31248544 - 31248662
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31248544 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 31248643  T
Q  233 aaaaacagcaagagataaa 251  Q
    |||||||||||||||||||    
T  31248644 aaaaacagcaagagataaa 31248662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 25942001 - 25941803
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25942001 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggaacaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 25941902  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25941901 caaaaataaacagcaagagataaa-------aggaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggga 25941810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 132 - 330
Target Start/End: Original strand, 26887075 - 26887271
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  26887075 tttgttgtgaattcgtcgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaaacaagcgggtagcaattaatccaa 26887174  T
Q  231 acaaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    |||||| ||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26887175 acaaaaccagcaagagataaa---aggagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 26887271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 3577338 - 3577537
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3577338 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 3577437  T
Q  233 aa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggag 328  Q
    ||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  3577438 aaaagtaaacagcaagagataaa----aggaagaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtct-ggggag 3577531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 30987356 - 30987473
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30987356 tgttgtgaattcgacgaggaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagcaaataatccaaaca 30987455  T
Q  234 aaaacagcaagagataaa 251  Q
    ||||||||||||||||||    
T  30987456 aaaacagcaagagataaa 30987473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 13879071 - 13878951
Alignment:
Q  133 ttgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13879071 ttgttgtgaattcgttgagaaaaaccacaccaaaaaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 13878972  T
Q  231 acaaaaacagcaagagataaa 251  Q
    |||||||||||||||||||||    
T  13878971 acaaaaacagcaagagataaa 13878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 35201156 - 35201274
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35201156 ttgttgtgaattcgttgagaaaaccacactaataaaaacttgatgcgtggagcaaattaatac-aagtaatcaaatcaagcgggtagcaaataatccaaa 35201254  T
Q  232 caaaaacagcaagagataaa 251  Q
    ||||||||||||||||||||    
T  35201255 caaaaacagcaagagataaa 35201274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 16786265 - 16786147
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16786265 ttgttgtgaatttgttgagaaaaccacaacaataagacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 16786166  T
Q  233 aaaaacagcaagagataaa 251  Q
    ||||||| ||||| |||||    
T  16786165 aaaaacaacaagaaataaa 16786147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 151 - 334
Target Start/End: Complemental strand, 17038550 - 17038368
Alignment:
Q  151 gaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagata 249  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17038550 gaaaatcacaccaataaaaacttgatgcatggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagaaata 17038451  T
Q  250 aannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||                   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17038450 aa--aggaagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgaccaagtctgggggagagagca 17038368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 25465754 - 25465947
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25465754 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgtgtagcaaataatccaaac 25465853  T
Q  233 a------aaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    |      ||||||||||||||||||                   |||||||||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  25465854 aaaaaataaaacagcaagagataaa-------------aggaagaagaacacaata-atttgtttacccagttcggtctaatgatggcctagtctggggg 25465939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 17694700 - 17694900
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcc-aa 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  17694700 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccaagtaatcaaatcaagcggatagcaaataatccaaa 17694799  T
Q  231 acaa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||    ||||||||| |||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  17694800 acaaaagtaaacagcaatagataaa------aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctagggg 17694892  T
Q  327 agagagca 334  Q
    ||||||||    
T  17694893 agagagca 17694900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 22342651 - 22342849
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca-aa 231  Q
    |||||||||||||||||  |||| ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  22342651 ttgttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtatggagcaaattaataccaaataatcaaatcaagcgggtagcaaataatccataa 22342750  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                   |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  22342751 caaaagtaaacagcaagagataaa-------aggaagaagatgaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctagggga 22342842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 22351703 - 22351900
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa- 231  Q
    |||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  22351703 ttgttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtgtggagcaaattaataccaagtaatcaaatcaagcgggtaacaaataatccaaaa 22351802  T
Q  232 caaaa----acagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||||    |||||||||||||||                   |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  22351803 caaaagtaaacagcaagagataaa-------aggaagaagaagaagaacacaaga-atttgtttacccagttc-gtctaatgatgacctagtctggggga 22351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 33216161 - 33216055
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 229  Q
    |||||||||||||| |||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33216161 tttgttgtgaattccttgtaaaaaccacaccaataaaaaacttgatgcgtggagcaaattaataccaagtaatcatatcaagcgggtagcaaataatcca 33216062  T
Q  230 aacaaaa 236  Q
    |||||||    
T  33216061 aacaaaa 33216055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 12166010 - 12166102
Alignment:
Q  146 gttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 236  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12166010 gttgtgaaaaccacaccaataataaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaacaaaa 12166102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 13467318 - 13467422
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaac--ttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||| |||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||| |||||||||||| || ||||    
T  13467318 tgttgtgaattcgttgtgaaaaccacaccaataaaaaatttgatgcgtggagtaaattaataccaagtaatcaaatcaaacgggtagcaaatgattcaaa 13467417  T
Q  232 caaaa 236  Q
    |||||    
T  13467418 caaaa 13467422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 19701755 - 19701860
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatcca 229  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||||| ||    
T  19701755 tttgttgtgaattcgttgtgaaaaccacaccaataataaacttgatgcgtggaacaaattaa-accaagtaatcaaatcaaacggatagcaaataattca 19701853  T
Q  230 aacaaaa 236  Q
    |||||||    
T  19701854 aacaaaa 19701860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 26643483 - 26643399
Alignment:
Q  152 aaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 236  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||    
T  26643483 aaaagcacaccaataaaacttgatgcgtggagcaaattaataccaagtaatgaaatcaagcggatagaaaataattcaaacaaaa 26643399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 26749449 - 26749365
Alignment:
Q  152 aaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaa 236  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||    
T  26749449 aaaagcacaccaataaaacttgatgcgtggagcaaattaataccaagtaatgaaatcaagcggatagaaaataattcaaacaaaa 26749365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 13878923 - 13878860
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13878923 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 13878860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 16786115 - 16786052
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16786115 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 16786052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 5165692 - 5165772
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaag 211  Q
    |||| |||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  5165692 ttgtcgtgaattcgttgtgaaaaacacaccaataataaacttgatgcgtggagcaaattaataccaagtaatcaaatcaag 5165772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 35201313 - 35201375
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  35201313 agaacacaagatatttgtttacccagttcggtctaataatgacctagtcttggggagagagca 35201375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 12166133 - 12166194
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12166133 agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctaggggagatagca 12166194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 33216022 - 33215961
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  33216022 agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtatgggggatagagca 33215961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 31248700 - 31248761
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||    
T  31248700 aagaacacaagatatttgtttaccaagttcggtataatgatgacctagtataggggagagag 31248761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 17066179 - 17066057
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaac 232  Q
    |||||||||| ||| |||||||||||||||||||  | |||||||||||| ||||||| | |||| ||||||||||||| |||  ||| ||||| |||||    
T  17066179 ttgtgaattcattgtgaaaaccacaccaataaaaaacctgatgcgtggagtaaattaaaatcaagcaatcaaatcaagctggtgacaatataattcaaac 17066080  T
Q  233 aa----aaacagcaagagataaa 251  Q
    ||    |||||||||||||||||    
T  17066079 aaaaataaacagcaagagataaa 17066057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 11262788 - 11262726
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || |||||||||||| |||||||| |||  ||||||||||||||||||||||||    
T  11262788 agaacacacgaaatttgtttaccccgttcggtccaatactgacctagtctgggggagagagca 11262726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 13467454 - 13467514
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  13467454 agaacacaaga-atttgtttacctagttcggtctaatcatgacctagtct-ggggagagagca 13467514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 19696770 - 19696708
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||||| |||  |||||||||||||| |||||||||    
T  19696770 agaacacacgaaatttgtttacccagttcggtccaatactgacctagtctgggagagagagca 19696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 22857938 - 22858000
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || |||||||||| |||||||||| |||  ||||||||||||||||||||||||    
T  22857938 agaacacacgaaatttgtttacacagttcggtccaatactgacctagtctgggggagagagca 22858000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 26643369 - 26643312
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||    
T  26643369 agaacacaaga-atttgtttacccagttcggtgtaaagatgacctggtctgggggagag 26643312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 26749335 - 26749278
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagag 330  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||    
T  26749335 agaacacaaga-atttgtttacccagttcggtgtaaagatgacctggtctgggggagag 26749278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 10584414 - 10584359
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  10584414 ttgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 10584359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 5165818 - 5165861
Alignment:
Q  291 tacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    
T  5165818 tacccagttcggtctaatgatgacctactctgggggagatagca 5165861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 16455409 - 16455472
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| || |||||||||| |||||||||| |||  ||||||||| ||||||||||||||    
T  16455409 aagaacacacgaaatttgtttactcagttcggtccaatactgacctagtatgggggagagagca 16455472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 17066033 - 17065986
Alignment:
Q  287 tgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||    
T  17066033 tgtttatccagttcggtctaatgatgacctactttgggggagagagca 17065986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 15346675 - 15346614
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||||| ||   ||||||||||||||||||||||||    
T  15346675 agaacacacgaaatttgtttacccagttcggtccaa-attgacctagtctgggggagagagca 15346614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 5165772 - 5165805
Alignment:
Q  178 gtggagcaaattaataccaagtaatcaaatcaag 211  Q
    ||||||||||||||||||||||||||||||||||    
T  5165772 gtggagcaaattaataccaagtaatcaaatcaag 5165805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 33309186 - 33309123
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  33309186 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 33309123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 17012357 - 17012310
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  17012357 atttgtttacctagttcggtccaatactgacctagtctgggggagaga 17012310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 26932555 - 26932609
Alignment:
Q  279 aagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||| ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  26932555 aagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 26932609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 28078180 - 28078242
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || |||||||||||| |||||||||||   ||||||||| || |||||||||||    
T  28078180 agaacacacgaaatttgtttaccctgttcggtctaaaattgacctagtatgagggagagagca 28078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 29754707 - 29754756
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  29754707 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 29754756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 30443605 - 30443555
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||| |||  | ||||||||| ||||||||||||    
T  30443605 atttgtttacccagttcggtccaatacttacctagtctcggggagagagca 30443555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 5273055 - 5273108
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||    
T  5273055 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggagcaa 5273108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 3629711 - 3629765
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaaa 187  Q
    ||||||||||||| |||||||| ||||||||||  |||||||||| ||||||||||    
T  3629711 tgttgtgaattcgatgagaaaa-cacaccaataacaaacttgatgtgtggagcaaa 3629765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 4641139 - 4641087
Alignment:
Q  282 atatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||| ||| |||||||| ||| | ||||||||||    
T  4641139 atatttgtttatccagttcggtccaataatgacctactctagaggagagagca 4641087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 5757571 - 5757524
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  5757571 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 5757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 12195515 - 12195562
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  12195515 ttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 12195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 19704551 - 19704614
Alignment:
Q  271 aagaacacaagata-tttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| ||| |||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  19704551 aagaacacaaaataatttgttgacccagttcggtccaaat-tgacctagtctgggggagagagca 19704614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 33311455 - 33311392
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||| ||||    
T  33311455 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagaaagca 33311392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 2232926 - 2232724
Alignment:
Q  134 tgttgtgaattcgttgagaaaa-ccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2232926 tgttgtgaattcgttgagaaaaaccacaccaataaaaacttgatgtgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 2232827  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    |||||||| |||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2232826 caaaaacaacaagagataaaggagagagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 2232727  T
Q  332 gca 334  Q
    |||    
T  2232726 gca 2232724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 9526797 - 9526600
Alignment:
Q  133 ttgttgtgaattcgttgagaaaac-cacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9526797 ttgttgtgaattcgttgagaaaaatcacaccaataaaacttgatgtgtggagcaaattaataacaagtaatcaaatcaagcgggtagcaaataatccaaa 9526698  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    | ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9526697 c-aaaacagcaagagataaa----aggaagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 9526603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 9522057 - 9521938
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9522057 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 9521958  T
Q  232 caaaaacagcaagagataaa 251  Q
    ||||||||||||||||||||    
T  9521957 caaaaacagcaagagataaa 9521938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 334
Target Start/End: Original strand, 2393131 - 2393330
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  2393131 tttgttgtgaattcgttgtgaaaaccacaccaataaaactttatgcgtggagcaaattaataccaagtaatcaaatcaagtggatagcaattaatccaaa 2393230  T
Q  232 caa---aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggag 328  Q
    |||   |||||||||||||||||                   |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  2393231 caaagtaaacagcaagagataaa----aggaagaagaagaagaagaacacaaga-atttgtttatccagttcggtctaatgatgacctagtct-ggggag 2393324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 21353196 - 21353396
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  21353196 ttgttatgaattcgttgagaaaaccacaccaataacaaacttgatgcgtggagcaaattaatactaagtaattaaatcaagtgggtagcaaataatccaa 21353295  T
Q  231 acaaaa----acagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    ||||||    ||||||||||||| |                   |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  21353296 acaaaataaaacagcaagagataga------aggaagaaagagaaagaacacaaga-atttgtttacccagttcggtctaaagatgacctagtctggggg 21353388  T
Q  327 agagagca 334  Q
    ||||||||    
T  21353389 agagagca 21353396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 332
Target Start/End: Original strand, 2401073 - 2401267
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||| ||||||||||    
T  2401073 ttgttgtgaattcgttgtgaaaatcacacaaataaaacttgatgcgtagagcaaattaataccaagtaatcaaatcaagtggataacaattaatccaaac 2401172  T
Q  233 aa---aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    ||   ||||| |||||||||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2401173 aaagtaaacaacaagagataaa-------aggaagaagaagaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggaga 2401264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 334
Target Start/End: Original strand, 4144543 - 4144731
Alignment:
Q  140 gaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa--- 234  Q
    |||||||||| ||||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||       
T  4144543 gaattcgttgtgaaaaccacaccaataataatcttgatacgtggagcaaattaataccaagtaatcaaatcaagcggatagcaaataattcaaacaaaag 4144642  T
Q  235 -aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagc 333  Q
     |||||||||||||||||                    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4144643 taaacagcaagagataaaggaagaagg-----------agaacacaaga-atttgtttacccagttcggtctaatgatgacctactctgggggagagagc 4144730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 25134404 - 25134293
Alignment:
Q  129 gtgtttgttgtgaattcgttgagaaaaccacaccaataaaactt-gatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatc 227  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||| || ||||||||| ||| |||||||||||||||||||| |||||||     
T  25134404 gtgtttgttgtgaattcgttgtgaaaaccacaccaataaaaatttgatgcgtgaagtaaattaatatcaaataatcaaatcaagcgggtagtaaataatt 25134305  T
Q  228 caaacaaaaaca 239  Q
    ||||||||||||    
T  25134304 caaacaaaaaca 25134293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 32569530 - 32569421
Alignment:
Q  14 cctgtgataaagtagaagttgaagacatccaatcagaaaaactagaggtggcgctacaagtggaagcaagcctttaatggacagggatgaattcatagtt 113  Q
    |||| ||||||||||| |||||||||||||||||||||  | |||||||||||||| |||||||||||||||||| ||||||||| ||| |  | || ||    
T  32569530 cctgagataaagtagaggttgaagacatccaatcagaactagtagaggtggcgctagaagtggaagcaagccttttatggacaggaatggacccgtaatt 32569431  T
Q  114 atgattttgc 123  Q
    ||||||||||    
T  32569430 atgattttgc 32569421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 9521912 - 9521849
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  9521912 aagaacacaagatatttgtttacccagttcggtctaatgacgacctagtatgggggagagagca 9521849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 331
Target Start/End: Complemental strand, 25134266 - 25134208
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  25134266 agaacacaaga-atttgtttacccacttcggtctaatgatgatctagtatgggggagaga 25134208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 14997226 - 14997176
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  14997226 atttgtttacctagttcggtctaatgataacctattctgggggagagagca 14997176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 16226462 - 16226399
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  16226462 aagaacacaaagatatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 16226399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 25860251 - 25860306
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||| |||||||||    
T  25860251 ttgttgtgaattcgttgtgaaaaccacaccaatatcaaacttgatgtgtggagcaa 25860306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 3091091 - 3091145
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggg 326  Q
    |||||||||||| || |||||| |||||||||||||||||||||||| ||||||||    
T  3091091 aagaacacaaga-atctgtttatccagttcggtctaatgatgacctactctggggg 3091145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 14183590 - 14183640
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||| ||   ||||||||||||||||||||||||    
T  14183590 atttgtttacccagttcggtccaaaactgacctagtctgggggagagagca 14183640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 15916673 - 15916623
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||||||||||| ||   ||||||||||||||||||||||||    
T  15916673 atttgtttacccagttcggtccaaaattgacctagtctgggggagagagca 15916623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 27916779 - 27916729
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||||| ||||||| |||  ||||||||||||||||||||||||    
T  27916779 atttgtttacccaattcggtccaatactgacctagtctgggggagagagca 27916729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 9459403 - 9459466
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  9459403 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 9459466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 9463230 - 9463293
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  9463230 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 9463293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 23786134 - 23786071
Alignment:
Q  271 aagaacacaag-atatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| | ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  23786134 aagaacacaaggaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 23786071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 26613238 - 26613286
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    ||||||||||||||||||||| |||  ||||||| ||||||||||||||    
T  26613238 atttgtttacccagttcggtcaaatactgacctaatctgggggagagag 26613286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 6115089 - 6115151
Alignment:
Q  272 agaacacaagata-tttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| ||| |||||||||||||||||||| ||   ||||||||||||||||||||||||    
T  6115089 agaacacaaaataatttgtttacccagttcggtccaaat-tgacctagtctgggggagagagca 6115151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 9314522 - 9314574
Alignment:
Q  157 cacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaag 211  Q
    |||||||||||||||||||| |||||||||||  | || ||||||||||||||||    
T  9314522 cacaccaataaaacttgatgtgtggagcaaat--aaacaaagtaatcaaatcaag 9314574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 13215518 - 13215465
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||||||||||| ||||||||||  |||||||||| |||||||||    
T  13215518 tgttgtgaattcgttgagaaaa-cacaccaataataaacttgatgtgtggagcaa 13215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 3090959 - 3091039
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttg-atgcgtggagcaaattaataccaagtaatcaaatcaagcgg 214  Q
    |||||||||||||||||  ||||| |||||||||||| ||  ||| ||||||||||| || |||||| |||||||||||||||    
T  3090959 ttgttgtgaattcgttgcaaaaac-acaccaataaaaatttcatgtgtggagcaaataaa-accaagaaatcaaatcaagcgg 3091039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 9314630 - 9314691
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| || ||||||  |||||| |||||||||||||||| | ||||||||||||||    
T  9314630 agaacacaaga-atctgtttatgcagttcagtctaatgatgacctactatgggggagagagca 9314691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 13127674 - 13127736
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || |||||||||||| |||||||| |||  | ||||||||||| ||||||||||    
T  13127674 agaacacatgaaatttgtttacccggttcggtccaatactaacctagtctggaggagagagca 13127736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 15823827 - 15823778
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  15823827 atttgttgacccagttcggtctaaat-tgacctagtctgggggagagagca 15823778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 16561762 - 16561700
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || |||||||||| |||||||||| |||  |||||||||||  |||||||||||    
T  16561762 agaacacacgaaatttgtttacacagttcggtccaatactgacctagtctatgggagagagca 16561700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 13598402 - 13598449
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  13598402 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 13598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 16231857 - 16231795
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||| ||||||||| |||  ||||||||||||||||||||||||    
T  16231857 aagaacacaaagatatttgttgacc-agttcggtccaatc-tgacctagtctgggggagagagca 16231795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 19072932 - 19072979
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  19072932 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 19072979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 19120822 - 19120869
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  19120822 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 19120869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 26644990 - 26644943
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  26644990 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 26644943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 28206911 - 28206965
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||| |||||||| ||||||||||  |||||||||| |||||||||    
T  28206911 ttgttgtgaattcgatgagaaaa-cacaccaataacaaacttgatgtgtggagcaa 28206965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 37069774 - 37069821
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  37069774 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 37069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 47180007 - 47179945
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| |||||||||| ||||||||||||| |||  ||||||||||| ||||||||||||    
T  47180007 aagaacacaaagatatttgttgacccagttcggtccaat-ctgacctagtct-ggggagagagca 47179945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 47704029 - 47703982
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  47704029 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 47703982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 50078634 - 50078689
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||| ||||||| |||||||| ||||||||||  |||||||||| |||||||||    
T  50078634 ttgttgcgaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagcaa 50078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 231445 - 231328
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  231445 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 231346  T
Q  234 aaaacagcaagagataaa 251  Q
    ||||||||||||||||||    
T  231345 aaaacagcaagagataaa 231328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 5687 - 5734
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  5687 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 5734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 133 - 334
Target Start/End: Original strand, 35385302 - 35385500
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35385302 ttgttgtgaattcattgagaaaactacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 35385401  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    ||||| || |||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35385402 caaaatcaacaagagataaa----aggaagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 35385497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 134 - 334
Target Start/End: Original strand, 2297849 - 2298049
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  2297849 tgttgtgaattcgttgagaaaaccacaccaacaaaacttgatgcgtggagtaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac- 2297947  T
Q  234 aaaacagcaagagat-aaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    ||||||||||||||| |||                   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  2297948 aaaacagcaagagataaaaaggaagagagagagagagaaagaacacaagatatttgtttacctagttcggtctaatgatgacctagtctgggggggagag 2298047  T
Q  333 ca 334  Q
    ||    
T  2298048 ca 2298049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 1171142 - 1170944
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  1171142 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgtgtggagcaaattaatatcaagtaatcaaaacaagcgggtagcaattaatccaaac 1171043  T
Q  233 aaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    |||| ||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1171042 aaaaccagcaagagataaa---aggagagagagagagaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagag 1170946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 22673163 - 22672968
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaaca 233  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22673163 tgttgtgaattcgttaagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataattcaaaca 22673064  T
Q  234 a----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
    |    |||||||||||||||||                   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22673063 aaaataaacagcaagagataaa--------aggaagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggaga 22672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 42238589 - 42238394
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42238589 ttgttgtgaattcgttgtaaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 42238490  T
Q  232 caa----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggggga 327  Q
    |||    |||||||||||||||||                    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42238489 caaaaataaacagcaagagataaaaggaagaagg----------agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctggggga 42238401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 156 - 334
Target Start/End: Complemental strand, 25445803 - 25445630
Alignment:
Q  156 ccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagataaann 253  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  25445803 ccacaccaataaaatacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacatcaagagataaa-- 25445706  T
Q  254 nnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
                     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25445705 ----aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 25445630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 156 - 334
Target Start/End: Complemental strand, 25452802 - 25452629
Alignment:
Q  156 ccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagataaann 253  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  25452802 ccacaccaataaaatacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaaaaacagcaagagataaa-- 25452705  T
Q  254 nnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
                     |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25452704 ----aggaagagagagaaagaacacaaga-atttgtttacccagttcggtctaatgatgacctattctgggggagagagca 25452629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 136 - 334
Target Start/End: Complemental strand, 28786728 - 28786538
Alignment:
Q  136 ttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa 234  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  28786728 ttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaaataatcaaatcaagcgggtagcaaataattcaaacaa 28786629  T
Q  235 -----aaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggaga 329  Q
         |||||||||||||||||                    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28786628 aaagcaaacagcaagagataaaaggaagg-------------agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggaga 28786543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 1240760 - 1240662
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1240760 tgttgtgaattcgttgaggaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 1240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 40223098 - 40222993
Alignment:
Q  133 ttgttgtgaattcgttg-agaaaaccacaccaataaaactt-gatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    ||||||||||||||||| | |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40223098 ttgttgtgaattcgttgtaaaaaaccacaccaataaaaatttgatgcgtggagtaaattaataccaagtaatcaaatcaagagggtagcaaataatccaa 40222999  T
Q  231 acaaaa 236  Q
    ||||||    
T  40222998 acaaaa 40222993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 334
Target Start/End: Original strand, 17841110 - 17841297
Alignment:
Q  140 gaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaacaa----a 235  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||||||| |||||||    |    
T  17841110 gaattcgttgtgaaaactacaccaataaaacttgatgcgtggggcaaattaatatcgagtaatcaaattaagcgggtagcaaataattcaaacaaaaata 17841209  T
Q  236 aacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    || |||||||||||||                    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841210 aatagcaagagataaaaggaagaagg----------agaacacaata-atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 17841297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 11962287 - 11962390
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa--cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||| |||||||||||||||||||  |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  11962287 tgttgtgaattcgttgtgaaaaccacaccaataaaaaacttgatgc-tgtagcaaattaatactaagtaatcaaatcaagcgggtagcaaataattcaaa 11962385  T
Q  232 caaaa 236  Q
    |||||    
T  11962386 caaaa 11962390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 20437249 - 20437145
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||||| ||||| |||||||| ||  ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20437249 tgttgtgaattcgttgtgaaaatcacaccaacaataaacttgatgtgttgagcaaattaatatcaagtaatcaaatcaagcgggtagcaaataattcaaa 20437150  T
Q  232 caaaa 236  Q
    |||||    
T  20437149 caaaa 20437145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 16093144 - 16093249
Alignment:
Q  134 tgttgtgaattcgttgagaaaa-ccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaa 230  Q
    |||||||||||||||| ||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||  || |||||||| |||    
T  16093144 tgttgtgaattcgttgtgaaaaaccacaccaataataaacttgatgcgtggagtaaattaataccaagtaatcaaatcaagcgaataacaaataattcaa 16093243  T
Q  231 acaaaa 236  Q
    ||||||    
T  16093244 acaaaa 16093249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 10627696 - 10627611
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataa--aacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 216  Q
    ||||||||||||| ||| |||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10627696 ttgttgtgaattcattgtgaaaaccacaccaataataaacttgatgcgtggagcaaattaaaaccaagcaatcaaatcaagcgggt 10627611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 11962420 - 11962481
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||||    
T  11962420 agaacacaaga-atttgtttacccagttcggtctaatgatgacctagtatgaggaagagagca 11962481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 10627561 - 10627500
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| || |||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  10627561 agaacacaaga-atctgtttacccagttcagtctaatgatgacctactctaggggagagagca 10627500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 31782310 - 31782413
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaa 231  Q
    |||||||||||| ||||  |||| || ||||||||||||||||| |||||||| ||  | |||||| |||||||||||||||||  ||| ||||| ||||    
T  31782310 ttgttgtgaatttgttgcaaaaatcataccaataaaacttgatgtgtggagcatat--aaaccaagaaatcaaatcaagcgggtgacaatataattcaaa 31782407  T
Q  232 caaaaa 237  Q
    ||||||    
T  31782408 caaaaa 31782413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 16093279 - 16093330
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctggg 324  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  16093279 agaacacaaga-atttgtttatccagttcggtctaatgatgacctagtatggg 16093330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 37705625 - 37705680
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  37705625 ttgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 37705680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 40222949 - 40222901
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagag 332  Q
    ||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  40222949 atttgtttacctagttcggtctaatgatgacctagtatgggggggagag 40222901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 1240624 - 1240562
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||| |||| |||||| |||||||| ||||||||||||||| |||| |||||||||    
T  1240624 aagaacacaaga-atttatttacctagttcggtttaatgatgacctagtttgggagagagagca 1240562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 10757470 - 10757408
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||   ||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  10757470 aagaacacaaagaatttgttgacccagttcggtctaatc-tgacctagtctgggggagagagca 10757408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 31782443 - 31782503
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| || |||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  31782443 agaacacaaga-atctgtttacc-agttcggtctaatgatgatctactctgggggagagagca 31782503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 3373121 - 3373184
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  3373121 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 3373184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 15552540 - 15552477
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  15552540 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 15552477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 31543029 - 31542966
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  31543029 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 31542966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 31545375 - 31545312
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  31545375 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 31545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 10749994 - 10749932
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||   ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  10749994 aagaacacaaagaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 10749932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 17818338 - 17818388
Alignment:
Q  138 gtgaattcgttgagaaaaccacaccaata--aaacttgatgcgtggagcaa 186  Q
    ||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  17818338 gtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 17818388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 31179357 - 31179418
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  31179357 aagaacaca-gaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 31179418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 4410303 - 4410254
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  4410303 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 4410254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 6661170 - 6661232
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||| ||||||||||| ||   |||||||||||| |||||||||||    
T  6661170 agaacacacgaaatttgtttatccagttcggtccaaatctgacctagtctgagggagagagca 6661232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 15143761 - 15143699
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||| ||||||| |||  ||||||||||| ||||||| ||||    
T  15143761 agaacacacgaaatttgtttacccatttcggtcaaatactgacctagtctaggggagaaagca 15143699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 15354573 - 15354622
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  15354573 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 15354622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 21289042 - 21288993
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  21289042 atttgttgacccagttcggtctaaat-tgacctagtctgggggagagagca 21288993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 26406464 - 26406514
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| |||||||||||||| | ||||| ||||| ||||||||||    
T  26406464 atttgtttacctagttcggtctaatgttaacctactctggaggagagagca 26406514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 34033420 - 34033479
Alignment:
Q  132 tttgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaata 193  Q
    |||||||||||||| || |  ||| |||||||||||||| ||||| ||||||||||||||||    
T  34033420 tttgttgtgaattcattaa--aaatcacaccaataaaacgtgatgtgtggagcaaattaata 34033479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 4898023 - 4897962
Alignment:
Q  273 gaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| | ||||||||||||||||| ||| |||  ||||||||| ||||||||| ||||    
T  4898023 gaacacaaaaaatttgtttacccagttcagtcgaatactgacctagtatgggggagaaagca 4897962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 10528937 - 10528990
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||| ||| |||||    
T  10528937 tgttgtgaattcgatgagaaaatcacaccaataacaacttgatgtgtgaagcaa 10528990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 26406340 - 26406402
Alignment:
Q  152 aaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggt 216  Q
    |||| ||||||||||||| |||||| |||||||||||  | |||||| |||||||||||| ||||    
T  26406340 aaaatcacaccaataaaatttgatgtgtggagcaaat--aaaccaagcaatcaaatcaagtgggt 26406402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 9353425 - 9353378
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  9353425 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 9353378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 17004053 - 17004006
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  17004053 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 17004006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 34477037 - 34477100
Alignment:
Q  271 aagaacacaagata-tttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||| | |||||| ||||||||||||| ||   ||||||||||||||||||||||||    
T  34477037 aagaacacaagagaatttgttgacccagttcggtccaaat-tgacctagtctgggggagagagca 34477100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 36932443 - 36932396
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  36932443 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 36932396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 38960116 - 38960179
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||| ||||||||||||||    
T  38960116 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtttgggggagagagca 38960179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 42127503 - 42127456
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| |||||||||| |||||| |||||||| ||||||||||||||||    
T  42127503 ttgttgacccagttcgatctaat-atgacctaatctgggggagagagca 42127456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 17824 - 17706
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17824 tgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaac 17725  T
Q  233 aaaaacagcaagagataaa 251  Q
    |||||||||||||||||||    
T  17724 aaaaacagcaagagataaa 17706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 306
Target Start/End: Complemental strand, 17655 - 17621
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtcta 306  Q
    |||||||||||||||| ||||||||||||||||||    
T  17655 agaacacaagatatttttttacccagttcggtcta 17621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 16657 - 16459
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 231  Q
    |||||||||||||| |||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16657 ttgttgtgaattcgatga--aaatcacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaaataatccaaa 16560  T
Q  232 caaaaacagcaagagataaannnnnnnnnnnnnnnnnnnaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 331  Q
    |||||||||||||| |||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16559 caaaaacagcaagaaataaa--aggaagagagaaagaaaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 16462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 16884 - 16965
Alignment:
Q  133 ttgttgtgaattcgttgagaaaaccacaccaataaaa-cttgatgcgtggagcaaattaataccaagtaatcaaatcaagcg 213  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  16884 ttgttgtgaattcgttgagaaaaccacaccaataaaaacttgatgcgtggaaaaaattaataccaagtaatcaaatcaagcg 16965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 16972 - 17034
Alignment:
Q  271 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16972 aagaacacaaga-atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 17034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 1627 - 1689
Alignment:
Q  272 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||| || ||||||||||||||||||||| ||   ||||||||| ||||||||||||||    
T  1627 agaacacacgaaatttgtttacccagttcggtcaaaaactgacctagtatgggggagagagca 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 345 - 282
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  345 aagaacacaaagaaatttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 473 - 421
Alignment:
Q  134 tgttgtgaattcgttgagaaaaccacaccaataa-aacttgatgcgtggagcaa 186  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  473 tgttgtgaattcgttgag-aaatcacaccaataacaacttgatgtgtggagcaa 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 22405 - 22356
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  22405 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 22356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 24680 - 24631
Alignment:
Q  284 atttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  24680 atttgttgacccagttcggtccaatc-tgacctagtctgggggagagagca 24631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 8512 - 8465
Alignment:
Q  286 ttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  8512 ttgttgacccagttcggtccaat-atgacctaatctgggggagagagca 8465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 6976 - 7028
Alignment:
Q  282 atatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    ||||||||||| ||||||||||| ||| |||||||| ||| | ||||||||||    
T  6976 atatttgtttatccagttcggtccaataatgacctactctagaggagagagca 7028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 6503 - 6440
Alignment:
Q  271 aagaacacaa-gatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagca 334  Q
    |||||||||| || ||||||| || |||||||||| |||  ||||||||||||||||||||||||    
T  6503 aagaacacaaagaaatttgttgactcagttcggtccaatc-tgacctagtctgggggagagagca 6440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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