View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6954_low_24 (Length: 253)
Name: NF6954_low_24
Description: NF6954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6954_low_24 |
 | |
|
| [»] scaffold0129 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 23717250 - 23717490
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717250 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
23717349 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717350 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
23717449 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717450 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
23717490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 32742229 - 32742469
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742229 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
32742328 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742329 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
32742428 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742429 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
32742469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 35216621 - 35216381
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216621 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
35216522 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216521 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
35216422 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216421 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
35216381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 38223377 - 38223137
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223377 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
38223278 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223277 |
gtacaagagtttcgttgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
38223178 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223177 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
38223137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 9313572 - 9313812
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313572 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcagtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
9313671 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313672 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctatgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
9313771 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313772 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
9313812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 4 - 241
Target Start/End: Complemental strand, 42989154 - 42988917
Alignment:
| Q |
4 |
cactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagggta |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989154 |
cactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagggta |
42989055 |
T |
|
| Q |
104 |
caagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctcc |
203 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989054 |
cagaagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctcc |
42988955 |
T |
|
| Q |
204 |
atgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42988954 |
atgtcaggatattttgctggtttgtgtcttttgatctc |
42988917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 335766 - 335526
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335766 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
335667 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335666 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
335567 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335566 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
335526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 3522877 - 3522637
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522877 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
3522778 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522777 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
3522678 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522677 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
3522637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 10269218 - 10269458
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269218 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
10269317 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269318 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
10269417 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269418 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
10269458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 14219178 - 14218938
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219178 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
14219079 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219078 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
14218979 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218978 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
14218938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 30704115 - 30704355
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30704115 |
acccactctcgccaaaacgatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaatcatcatgagg |
30704214 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30704215 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
30704314 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30704315 |
tccatgtcaggatattttgttggtttgtgtcttttgatctc |
30704355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 14677345 - 14677105
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677345 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
14677246 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677245 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
14677146 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677145 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
14677105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 45107104 - 45106864
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107104 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
45107005 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107004 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
45106905 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45106904 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
45106864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 21395911 - 21395672
Alignment:
| Q |
2 |
cccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395911 |
cccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgaggg |
21395812 |
T |
|
| Q |
102 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttct |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395811 |
tacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttct |
21395712 |
T |
|
| Q |
202 |
ccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395711 |
ccatgtcaggatattttgctggtttgtgtcttttgatctc |
21395672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 1085603 - 1085843
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085603 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
1085702 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085703 |
gtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
1085802 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085803 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
1085843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 17195388 - 17195628
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
17195388 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtacagaagttaaaatctgaatcatcatgagg |
17195487 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17195488 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
17195587 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17195588 |
tccatatcaggatattttgcttgtttgtgtcttttgatctc |
17195628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 10485659 - 10485419
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10485659 |
acccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagtcatcctgtagagaagttaaaatctgaatcatcatgagg |
10485560 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10485559 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtaaaaaccactcataaacaaccttc |
10485460 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10485459 |
tccacgtcaggatattttgctggtttgtgtcttttgatctc |
10485419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 49550105 - 49550345
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550105 |
acccactctcgccaaaaggatgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
49550204 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550205 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
49550304 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49550305 |
tccatgtcaggatattttattggtttgtgtcttttgatctc |
49550345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 5926651 - 5926523
Alignment:
| Q |
113 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5926651 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
5926552 |
T |
|
| Q |
213 |
tattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5926551 |
tattttgctggtttgtgtcttttgatctc |
5926523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 113 - 241
Target Start/End: Original strand, 27182471 - 27182599
Alignment:
| Q |
113 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27182471 |
cattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcagga |
27182570 |
T |
|
| Q |
213 |
tattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
27182571 |
tattttgctggtttgtgtcttttgatctc |
27182599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 44553311 - 44553551
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553311 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
44553410 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553411 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
44553510 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553511 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
44553551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 38518173 - 38518413
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518173 |
acccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
38518272 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518273 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
38518372 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518373 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
38518413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 34945779 - 34945539
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34945779 |
acccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
34945680 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
34945679 |
gtgcaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcataaacaacattc |
34945580 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34945579 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
34945539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 96 - 241
Target Start/End: Original strand, 27644504 - 27644649
Alignment:
| Q |
96 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaa |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27644504 |
tgagggtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtaatattcacacgttcttgatgctgtagaaaccactcataaacaa |
27644603 |
T |
|
| Q |
196 |
ccttctccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27644604 |
ccttctccatgtcaggatattttgctggtttgtgtcttttgatctc |
27644649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 111 - 241
Target Start/End: Complemental strand, 20394982 - 20394852
Alignment:
| Q |
111 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20394982 |
ttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttctccatgtcag |
20394883 |
T |
|
| Q |
211 |
gatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20394882 |
gatattttgctggtttgtgtcttttgatctc |
20394852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 2272790 - 2272550
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272790 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
2272691 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272690 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
2272591 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2272590 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
2272550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 3535104 - 3534864
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535104 |
acccactctcgccaaaacgacgaaataactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
3535005 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535004 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
3534905 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3534904 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
3534864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7356527 - 7356764
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7356527 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatt-cccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
7356625 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7356626 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactc--aaacaaccttc |
7356723 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7356724 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
7356764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 12533165 - 12532924
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533165 |
acccactctcgccaaaatgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
12533066 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
12533065 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaacattc |
12532966 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctgg-tttgtgtcttttgatctc |
241 |
Q |
| |
|
||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
12532965 |
tccttgtcaggatattttgctggttttgtgtcttttgatctc |
12532924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16641835 - 16642075
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641835 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
16641934 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641935 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
16642034 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16642035 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
16642075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 41774118 - 41773878
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774118 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
41774019 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774018 |
gtacaagagtttcattgtatctcttgccttctacaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
41773919 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41773918 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
41773878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 39080 - 39320
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
39080 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcatgtagagaagttaaaatctgaatcatcatgagg |
39179 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39180 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
39279 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39280 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
39320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 2026885 - 2026645
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026885 |
acccactctcgacaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
2026786 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026785 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
2026686 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026685 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
2026645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37038770 - 37039010
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038770 |
acccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
37038869 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038870 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
37038969 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038970 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
37039010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 43488278 - 43488038
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488278 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
43488179 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
43488178 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaactttc |
43488079 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488078 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
43488038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 23415871 - 23415631
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415871 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
23415772 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415771 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgaaattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
23415672 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23415671 |
tccatgtcaggatattttactggtttgtgtcttttgatctc |
23415631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 3615494 - 3615254
Alignment:
| Q |
1 |
acccactctcgccaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3615494 |
acccactctcgtcaaaacgacgaaatgactttatgccatgtcggtgcttgaatttcccaagccatcctgtagagaagttaaaatctgaatcatcatgagg |
3615395 |
T |
|
| Q |
101 |
gtacaagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgctgtagaaaccactcataaacaaccttc |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3615394 |
gtataagagtttcattgtatctcttgccttctgcaaaattaattctcctgtgatattcacacgttcttgatgttgtagaaaccactcataaacaaccttc |
3615295 |
T |
|
| Q |
201 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3615294 |
tccatgtcaggatattttgctggtttgtgtcttttgatctc |
3615254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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