View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6954_low_8 (Length: 531)

Name: NF6954_low_8
Description: NF6954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6954_low_8
NF6954_low_8
[»] chr5 (7 HSPs)
chr5 (18-523)||(12600258-12600762)
chr5 (208-523)||(15806119-15806445)
chr5 (104-207)||(15805040-15805143)
chr5 (37-76)||(8551620-8551659)
chr5 (397-449)||(30417261-30417313)
chr5 (37-78)||(16501992-16502033)
chr5 (37-74)||(34980813-34980850)
[»] chr8 (10 HSPs)
chr8 (206-463)||(3321108-3321376)
chr8 (222-468)||(3366997-3367259)
chr8 (104-208)||(3366077-3366181)
chr8 (406-511)||(3387900-3388004)
chr8 (116-183)||(3319670-3319737)
chr8 (397-448)||(3408028-3408079)
chr8 (359-448)||(3263211-3263300)
chr8 (416-469)||(3325705-3325758)
chr8 (280-328)||(3263116-3263164)
chr8 (37-73)||(4247725-4247761)
[»] chr3 (2 HSPs)
chr3 (37-73)||(6803406-6803442)
chr3 (272-344)||(6906371-6906443)
[»] scaffold0026 (1 HSPs)
scaffold0026 (36-75)||(1174-1213)
[»] chr7 (2 HSPs)
chr7 (37-75)||(28074106-28074144)
chr7 (36-73)||(33655313-33655350)
[»] chr6 (3 HSPs)
chr6 (37-75)||(9721141-9721179)
chr6 (37-75)||(23090998-23091036)
chr6 (36-72)||(21607050-21607086)
[»] chr4 (3 HSPs)
chr4 (37-75)||(44145776-44145814)
chr4 (37-78)||(54935070-54935111)
chr4 (39-75)||(34110803-34110839)
[»] scaffold0468 (1 HSPs)
scaffold0468 (272-345)||(6711-6784)


Alignment Details
Target: chr5 (Bit Score: 462; Significance: 0; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 18 - 523
Target Start/End: Complemental strand, 12600762 - 12600258
Alignment:
Q  18 atcagaagcaggaagtgaagtgtgtttggatttaaggtttaggaggggaagagagggggagtgaagtaaataactacaatctaaaagaaactgctgttta 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  12600762 atcagaagcaggaagtgaagtgtgtttggatttaaggtttaggaggggaagagagggg-agtgaagtacataactacaatctaaaagaaactgctgttta 12600664  T
Q  118 tctaatatatgatcaatctattgctaccgaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccattgagtgagata 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12600663 tctaatatatgatcaatctattgctaccgaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccattgagtgagata 12600564  T
Q  218 cttgtgtttgaaatgatttcgaatggtatgaaataccagtgctttgttatatcgtggttttcttccaaacttgtttaatattactaagttttaagtgaat 317  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  12600563 cttgtgtttgaaatgatttcgaatggtatgaaacgccagtgctttgttatatcttggttttcttccaaacttgtttaatattactaagttttaagtcaat 12600464  T
Q  318 aacaactagatctctttgataaaagtcaaggtaaatcctttccaatggactcgtctcgggtcattagaaagacacttataatctctagtgaggtcgacat 417  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  12600463 aacaactagatttctttgataaaagtcaaggtaaatcctttccaatggactcgtctcgagtcattagaaagacacttataatctctagtgaggtcaacat 12600364  T
Q  418 gatcaagttgtaaaagtttcagtttcttcatcctttttaaagaatcagtactgacgaaaagtcaaatgctttgcaaacttcaaaaccaagtcattcacag 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12600363 gatcaagttgtaaaagtttcagtttcttcatcctttttaaagaatcagtactgacgaaaagtcaaatgctttgcaaacttcaaaaccaagtcatttacag 12600264  T
Q  518 gttctg 523  Q
    ||||||    
T  12600263 gttctg 12600258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 208 - 523
Target Start/End: Original strand, 15806119 - 15806445
Alignment:
Q  208 gagtgagatacttgtgtttgaaatgatttcgaatggtatgaaataccagtgctttgttatatcgtggttttcttccaaacttgtttaatattactaagtt 307  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||    
T  15806119 gagtgagata-ttgtgtttgaaatgattttgaatggtatgaaatgccagtgctttgttatatcttggttttcttccaaacttgttttatactactatgtt 15806217  T
Q  308 ttaagtgaataacaactagatctctttgataaaagtca----------------aggtaaatcctttccaatggactcgtctcgggtcattagaaagaca 391  Q
    |||||| ||||||||   ||| ||||||||||||||||                ||||||||||||||||||| | ||||||| ||||||||||||||||    
T  15806218 ttaagtcaataacaa---gatttctttgataaaagtcatcaggtattttgttgaaggtaaatcctttccaatgtattcgtctcaggtcattagaaagaca 15806314  T
Q  392 cttataatctctagtgaggtcgacatgatcaagttgtaaaagtttcagtttcttcatcctttttaaagaatcagtactgacgaaaagtcaaatgctttgc 491  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15806315 cttataatctctagtgaggtcgacatgatcaagttgtaaaagtctc-gtttcttcatcctttttaaagaatcagtactgacgaaaagttaaatgctttgc 15806413  T
Q  492 aaacttcaaaaccaagtcattcacaggttctg 523  Q
    |||||||||| |||||||||| ||||||||||    
T  15806414 aaacttcaaagccaagtcatttacaggttctg 15806445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 15805040 - 15805143
Alignment:
Q  104 gaaactgctgtttatctaatatatgatcaatctattgctaccgaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagc 203  Q
    |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15805040 gaaactgcggtttatctaatatatgatcaatctatttctacggaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagc 15805139  T
Q  204 catt 207  Q
    ||||    
T  15805140 catt 15805143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 8551659 - 8551620
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagaggggg 76  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  8551659 gtgtgtttggattgaaggtttaggaggggaagagaggggg 8551620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 30417313 - 30417261
Alignment:
Q  397 aatctctagtgaggtcgacatgatcaagttgtaaaagtttcagtttcttcatc 449  Q
    |||||| ||||||||| |||  |||||||||||||||| ||||||||||||||    
T  30417313 aatctccagtgaggtcaacacaatcaagttgtaaaagtctcagtttcttcatc 30417261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 16502033 - 16501992
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagggggag 78  Q
    ||||||||||||| | |||||||||||| |||||||||||||    
T  16502033 gtgtgtttggattgagggtttaggagggaaagagagggggag 16501992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 34980813 - 34980850
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagaggg 74  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  34980813 gtgtgtttggattgaaggtttaggaggggaagggaggg 34980850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 206 - 463
Target Start/End: Original strand, 3321108 - 3321376
Alignment:
Q  206 ttgagtgagatacttgtgtttgaaatgatttcgaatggtatgaaataccagtgctttgttatatcgtggttttcttccaaacttgtttaatattactaag 305  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||   || ||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  3321108 ttgagtgagacacttctgtttgaaatgattttgaatggtatgaatcgccggtgctttgttatatcttggttttcttccaaacttgtttaatactactatg 3321207  T
Q  306 ttttaagtgaataacaactagatctctttgataaaagtca----------------aggtaaatcctttccaatggactcgtctcgggtcattagaaaga 389  Q
    ||||| || ||||||||||     ||  || |||||||||                |||||||||||||||||||| |||||||| ||||||||||||||    
T  3321208 ttttacgtcaataacaact-----tccctgttaaaagtcatcagatatattgttgaaggtaaatcctttccaatgggctcgtctcaggtcattagaaaga 3321302  T
Q  390 cacttataatctctagtgaggtcgacatgatcaagttgtaaaagtttcagtttcttcatcctttttaaagaatc 463  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  3321303 cacttataatctctagtgaggtccacatgatcaagttgtaaaagtctcattttcttcatcctctttaaagaatc 3321376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 222 - 468
Target Start/End: Original strand, 3366997 - 3367259
Alignment:
Q  222 tgtttgaaatgatttcgaatggtatgaaataccagtgctttgttatatcgtggttttcttccaaacttgtttaatattactaagttttaagtgaataaca 321  Q
    ||||| ||||||||||||||||||||||   || ||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||| ||||| |    
T  3366997 tgtttcaaatgatttcgaatggtatgaagcgccggtgctttgttatatcttggtcttcttccaaacttgtttaatactaccaagttttaagtcaataata 3367096  T
Q  322 actagatctctttgataaaagtca----------------aggtaaatcctttccaatggactcgtctcgggtcattagaaagacacttataatctctag 405  Q
    ||||||| ||  | ||||||||||                |||||||||||||| ||||  |||||||| |||||||||||| ||||||| |||||||||    
T  3367097 actagatttccctaataaaagtcatcaggtatattgttgaaggtaaatcctttcgaatgagctcgtctcaggtcattagaaaaacacttaaaatctctag 3367196  T
Q  406 tgaggtcgacatgatcaagttgtaaaagtttcagtttcttcatcctttttaaagaatcagtac 468  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||||| ||| |||||| ||||||    
T  3367197 tgaggtcgacatgatcaaattgaaaaagtctcagtctcttcatccctttgaaagaaccagtac 3367259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 3366077 - 3366181
Alignment:
Q  104 gaaactgctgtttatctaatatatgatcaatctattgctaccgaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagc 203  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3366077 gaaactgctgtttatctaatatatgatcaatctattgctacggaagttgagccttcaagtactattgaagttgacccatcaactagcacaaatattgagc 3366176  T
Q  204 cattg 208  Q
    |||||    
T  3366177 cattg 3366181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 511
Target Start/End: Complemental strand, 3388004 - 3387900
Alignment:
Q  406 tgaggtcgacatgatcaagttgtaaaagtttcagtttcttcatcctttttaaagaatcagtactgacgaaaagtcaaatgctttgcaaacttcaaaacca 505  Q
    |||||| |||||||||||||||| | ||  |||||||||||||||| ||||||||||||||||||| |||||||  | | || ||| |||||||||||||    
T  3388004 tgaggttgacatgatcaagttgtgacagactcagtttcttcatcctctttaaagaatcagtactgaagaaaagtttacttctctgc-aacttcaaaacca 3387906  T
Q  506 agtcat 511  Q
    ||||||    
T  3387905 agtcat 3387900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 3319670 - 3319737
Alignment:
Q  116 tatctaatatatgatcaatctattgctaccgaagttgagccatcaagtactattgaagttgacccatc 183  Q
    ||||||||||||||||| || | |||||  ||| ||||| |||||| |||||| ||||||||||||||    
T  3319670 tatctaatatatgatcagtcaaatgctatggaaattgagtcatcaaatactatggaagttgacccatc 3319737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 3408028 - 3408079
Alignment:
Q  397 aatctctagtgaggtcgacatgatcaagttgtaaaagtttcagtttcttcat 448  Q
    |||||| ||||||||| ||| ||||||||||||||||| | |||||||||||    
T  3408028 aatctccagtgaggtcaacacgatcaagttgtaaaagtctaagtttcttcat 3408079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 448
Target Start/End: Original strand, 3263211 - 3263300
Alignment:
Q  359 ccaatggactcgtctcgggtcattagaaagacacttataatctctagtgaggtcgacatgatcaagttgtaaaagtttcagtttcttcat 448  Q
    ||||||||| | |||| | || ||||||||| ||  |||||||| ||| ||||| |||| ||||||||||| |||| |||| ||||||||    
T  3263211 ccaatggacccatctcagttctttagaaagatacccataatctccagtcaggtccacattatcaagttgtagaagtctcagattcttcat 3263300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 3325705 - 3325758
Alignment:
Q  416 atgatcaagttgtaaaagtttcagtttcttcatcctttttaaagaatcagtact 469  Q
    |||||||||||| |||||| ||||||||||||||   || ||||||||||||||    
T  3325705 atgatcaagttgcaaaagtctcagtttcttcatctccttgaaagaatcagtact 3325758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 3263116 - 3263164
Alignment:
Q  280 ttccaaacttgtttaatattactaagttttaagtgaataacaactagat 328  Q
    |||||||||||||| ||||| ||| ||||||||| ||||||||| ||||    
T  3263116 ttccaaacttgtttgatattgctatgttttaagtcaataacaacgagat 3263164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 4247761 - 4247725
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagg 73  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  4247761 gtgtgtttggattgaaggtttaggaggggaagggagg 4247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 6803442 - 6803406
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagg 73  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagagg 6803406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 6906371 - 6906443
Alignment:
Q  272 tggttttcttccaaacttgtttaatattactaagttttaagtgaataacaactagatctctttgataaaagtc 344  Q
    |||||| ||||||||||||||||| ||| |||| |||||| |  | ||||||||||| || ||||||||||||    
T  6906371 tggtttccttccaaacttgtttaacattgctaaattttaattctaaaacaactagatttccttgataaaagtc 6906443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 1174 - 1213
Alignment:
Q  36 agtgtgtttggatttaaggtttaggaggggaagagagggg 75  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  1174 agtgtgtttggattgagggtttaggaggggaagagagggg 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 28074106 - 28074144
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagggg 75  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  28074106 gtgtgtttggattgaaggtttaggaggggaagggagggg 28074144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 33655350 - 33655313
Alignment:
Q  36 agtgtgtttggatttaaggtttaggaggggaagagagg 73  Q
    |||||||||||||| | |||||||||||||||||||||    
T  33655350 agtgtgtttggattgagggtttaggaggggaagagagg 33655313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 9721141 - 9721179
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagggg 75  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  9721141 gtgtgtttggattgaaggtttaggaggggaagggagggg 9721179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 23090998 - 23091036
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagggg 75  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  23090998 gtgtgtttggattgaaggtttaggaggggaagggagggg 23091036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 21607086 - 21607050
Alignment:
Q  36 agtgtgtttggatttaaggtttaggaggggaagagag 72  Q
    |||||||||||||| | ||||||||||||||||||||    
T  21607086 agtgtgtttggattgagggtttaggaggggaagagag 21607050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 44145776 - 44145814
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagggg 75  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  44145776 gtgtgtttggattcaaggtttaggaggggaagggagggg 44145814  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 54935070 - 54935111
Alignment:
Q  37 gtgtgtttggatttaaggtttaggaggggaagagagggggag 78  Q
    ||||||||||||| | |||||||||||||||| |||||||||    
T  54935070 gtgtgtttggattgagggtttaggaggggaagggagggggag 54935111  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 34110803 - 34110839
Alignment:
Q  39 gtgtttggatttaaggtttaggaggggaagagagggg 75  Q
    ||||||||||| | |||||||||||||||||||||||    
T  34110803 gtgtttggattgagggtttaggaggggaagagagggg 34110839  T

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Target: scaffold0468 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 6711 - 6784
Alignment:
Q  272 tggttttcttccaaacttgtttaatattactaagttttaagtgaataacaactagatctctttgataaaagtca 345  Q
    |||||| ||||||||||||||||| ||| |||| |||||| |  | ||||||||||| || ||||| |||||||    
T  6711 tggtttccttccaaacttgtttaacattgctaaattttaattctaaaacaactagatttccttgatgaaagtca 6784  T

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