View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6958_high_8 (Length: 203)
Name: NF6958_high_8
Description: NF6958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6958_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 2756915 - 2756773
Alignment:
| Q |
17 |
aagttccacaactagtttgaggaaaaaccatagaagaaatcatgannnnnnnngtgtgtggaagagttcagagtgtgttctataagatattgttgttaca |
116 |
Q |
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| T |
2756915 |
aagttccacaactagtttgagggaaaaccatagaagaaatcgtgattatttttgtgtgtggaagagttcagagtgtgttctataagatattgttgttaca |
2756816 |
T |
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| Q |
117 |
tagtattgctagtgtttttaaggctacaagtgtgatattaatg |
159 |
Q |
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| T |
2756815 |
tagtattgctagtgtttttaaggctacaagtgtgatattaatg |
2756773 |
T |
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