View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6960_low_22 (Length: 248)

Name: NF6960_low_22
Description: NF6960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6960_low_22
NF6960_low_22
[»] chr6 (17 HSPs)
chr6 (15-241)||(20010346-20010572)
chr6 (15-241)||(15462546-15462772)
chr6 (47-241)||(14376761-14376955)
chr6 (135-238)||(21566839-21566942)
chr6 (22-241)||(19438219-19438438)
chr6 (47-241)||(18797932-18798126)
chr6 (130-238)||(10465696-10465804)
chr6 (47-102)||(19486278-19486333)
chr6 (135-238)||(19881726-19881829)
chr6 (32-226)||(8720565-8720759)
chr6 (135-214)||(21474914-21474993)
chr6 (23-214)||(25771062-25771253)
chr6 (135-241)||(34642430-34642536)
chr6 (47-103)||(16813882-16813938)
chr6 (147-235)||(18404787-18404875)
chr6 (47-91)||(19456265-19456309)
chr6 (47-91)||(19466410-19466454)
[»] chr1 (18 HSPs)
chr1 (15-241)||(20853532-20853758)
chr1 (47-214)||(18273191-18273358)
chr1 (18-238)||(24096390-24096610)
chr1 (23-238)||(21742327-21742542)
chr1 (135-241)||(19857786-19857892)
chr1 (175-238)||(16670683-16670746)
chr1 (147-192)||(22402085-22402130)
chr1 (141-193)||(21176854-21176906)
chr1 (135-238)||(21738811-21738914)
chr1 (141-196)||(22435560-22435615)
chr1 (130-241)||(31536769-31536880)
chr1 (135-241)||(20832673-20832779)
chr1 (147-241)||(38909598-38909692)
chr1 (147-241)||(52989264-52989358)
chr1 (147-204)||(20081185-20081242)
chr1 (130-239)||(20297890-20297999)
chr1 (141-238)||(22496031-22496128)
chr1 (141-193)||(24784677-24784729)
[»] chr5 (26 HSPs)
chr5 (15-241)||(22465210-22465436)
chr5 (46-238)||(20779204-20779396)
chr5 (15-235)||(20824713-20824933)
chr5 (48-238)||(28891827-28892017)
chr5 (129-238)||(20770512-20770621)
chr5 (47-193)||(21560955-21561101)
chr5 (47-227)||(21983073-21983253)
chr5 (135-241)||(23563050-23563156)
chr5 (130-238)||(23077790-23077898)
chr5 (143-241)||(16257918-16258016)
chr5 (143-241)||(22591637-22591735)
chr5 (143-241)||(22595192-22595290)
chr5 (22-103)||(23669899-23669980)
chr5 (130-241)||(25851447-25851558)
chr5 (175-238)||(28911673-28911736)
chr5 (175-238)||(28926941-28927004)
chr5 (47-229)||(43122759-43122941)
chr5 (141-185)||(23537153-23537197)
chr5 (130-241)||(20345657-20345768)
chr5 (141-196)||(20804001-20804056)
chr5 (135-238)||(21870163-21870266)
chr5 (135-238)||(21874443-21874546)
chr5 (147-238)||(23526461-23526552)
chr5 (135-241)||(17266216-17266322)
chr5 (143-196)||(21410540-21410593)
chr5 (147-192)||(26735659-26735704)
[»] scaffold0605 (1 HSPs)
scaffold0605 (15-205)||(1655-1845)
[»] scaffold0034 (4 HSPs)
scaffold0034 (15-238)||(70747-70970)
scaffold0034 (47-241)||(11609-11803)
scaffold0034 (135-241)||(1655-1761)
scaffold0034 (141-196)||(121924-121979)
[»] scaffold0029 (1 HSPs)
scaffold0029 (48-235)||(93603-93790)
[»] chr4 (14 HSPs)
chr4 (15-238)||(27903731-27903953)
chr4 (47-214)||(13879487-13879654)
chr4 (135-241)||(16151102-16151208)
chr4 (135-241)||(16155248-16155354)
chr4 (47-214)||(15073737-15073904)
chr4 (135-241)||(15267242-15267348)
chr4 (135-241)||(51603492-51603598)
chr4 (135-241)||(53750170-53750276)
chr4 (47-103)||(8709055-8709111)
chr4 (147-235)||(8514-8602)
chr4 (130-241)||(11203932-11204043)
chr4 (130-241)||(44658566-44658677)
chr4 (147-196)||(15521-15570)
chr4 (47-100)||(14697479-14697532)
[»] chr3 (33 HSPs)
chr3 (48-235)||(10416979-10417166)
chr3 (15-238)||(13317500-13317723)
chr3 (135-241)||(31692113-31692219)
chr3 (135-241)||(31941998-31942104)
chr3 (38-228)||(15230601-15230791)
chr3 (38-228)||(15236469-15236659)
chr3 (47-193)||(12857472-12857618)
chr3 (17-236)||(17189351-17189570)
chr3 (135-238)||(17494745-17494848)
chr3 (18-241)||(18131275-18131498)
chr3 (135-241)||(12357455-12357561)
chr3 (22-238)||(11958112-11958328)
chr3 (135-229)||(2245612-2245706)
chr3 (135-241)||(8744318-8744424)
chr3 (135-241)||(12181439-12181545)
chr3 (135-240)||(13945119-13945224)
chr3 (23-238)||(14290463-14290678)
chr3 (23-238)||(35983164-35983379)
chr3 (143-241)||(2036840-2036938)
chr3 (143-241)||(2040581-2040679)
chr3 (143-241)||(14039849-14039947)
chr3 (135-241)||(16384300-16384406)
chr3 (135-241)||(16831456-16831562)
chr3 (136-238)||(24190399-24190501)
chr3 (147-204)||(15066168-15066225)
chr3 (47-100)||(19727757-19727810)
chr3 (141-193)||(12502024-12502076)
chr3 (47-103)||(15008650-15008706)
chr3 (141-185)||(16803942-16803986)
chr3 (47-103)||(24190311-24190367)
chr3 (141-196)||(11861444-11861499)
chr3 (135-238)||(16825210-16825313)
chr3 (130-241)||(47127034-47127145)
[»] scaffold0010 (2 HSPs)
scaffold0010 (48-235)||(180548-180735)
scaffold0010 (135-241)||(39038-39142)
[»] scaffold1530 (1 HSPs)
scaffold1530 (22-241)||(886-1105)
[»] scaffold0053 (2 HSPs)
scaffold0053 (52-238)||(65028-65214)
scaffold0053 (23-238)||(62478-62693)
[»] chr8 (15 HSPs)
chr8 (47-229)||(20391530-20391712)
chr8 (47-220)||(6606633-6606806)
chr8 (142-241)||(21970694-21970793)
chr8 (47-241)||(22027423-22027617)
chr8 (135-214)||(22374401-22374480)
chr8 (130-241)||(29300569-29300680)
chr8 (142-240)||(22004225-22004323)
chr8 (135-238)||(21928960-21929063)
chr8 (142-240)||(21998584-21998682)
chr8 (141-238)||(19981505-19981602)
chr8 (135-238)||(22054395-22054498)
chr8 (147-241)||(16268367-16268461)
chr8 (142-196)||(21330108-21330162)
chr8 (147-204)||(21163710-21163767)
chr8 (40-100)||(22421177-22421237)
[»] scaffold0058 (1 HSPs)
scaffold0058 (135-241)||(22617-22723)
[»] scaffold0076 (1 HSPs)
scaffold0076 (117-241)||(53126-53250)
[»] scaffold0609 (1 HSPs)
scaffold0609 (47-214)||(7964-8131)
[»] scaffold0023 (1 HSPs)
scaffold0023 (135-238)||(164107-164210)
[»] scaffold0203 (1 HSPs)
scaffold0203 (135-241)||(3754-3860)
[»] scaffold0074 (1 HSPs)
scaffold0074 (135-241)||(15567-15673)
[»] chr7 (19 HSPs)
chr7 (47-229)||(12203499-12203681)
chr7 (48-238)||(16947162-16947352)
chr7 (137-241)||(13676903-13677007)
chr7 (135-238)||(13004921-13005024)
chr7 (23-238)||(14260936-14261151)
chr7 (135-241)||(18050640-18050746)
chr7 (130-238)||(12460079-12460187)
chr7 (135-238)||(11385119-11385222)
chr7 (47-238)||(12798194-12798385)
chr7 (47-241)||(14283061-14283255)
chr7 (130-238)||(13024795-13024903)
chr7 (135-238)||(12712353-12712456)
chr7 (47-241)||(14145029-14145223)
chr7 (18-91)||(13676790-13676863)
chr7 (130-241)||(26115277-26115388)
chr7 (188-238)||(15810715-15810765)
chr7 (135-193)||(19150467-19150525)
chr7 (135-193)||(20749866-20749924)
chr7 (168-241)||(21755901-21755974)
[»] scaffold0243 (2 HSPs)
scaffold0243 (135-241)||(9477-9581)
scaffold0243 (143-175)||(23714-23746)
[»] scaffold0167 (1 HSPs)
scaffold0167 (135-241)||(5548-5654)
[»] scaffold0011 (2 HSPs)
scaffold0011 (47-241)||(153899-154093)
scaffold0011 (47-100)||(23377-23430)
[»] chr2 (15 HSPs)
chr2 (47-193)||(21901546-21901692)
chr2 (135-238)||(19716260-19716363)
chr2 (135-238)||(19720823-19720926)
chr2 (135-238)||(23097261-23097364)
chr2 (147-204)||(23028739-23028796)
chr2 (135-238)||(23274690-23274793)
chr2 (135-241)||(12577450-12577556)
chr2 (147-204)||(21320280-21320337)
chr2 (147-204)||(23029870-23029927)
chr2 (141-193)||(24704770-24704822)
chr2 (47-103)||(28350884-28350940)
chr2 (147-238)||(20321089-20321180)
chr2 (141-238)||(22742209-22742306)
chr2 (47-100)||(24817221-24817274)
chr2 (147-235)||(22733020-22733108)
[»] scaffold0317 (2 HSPs)
scaffold0317 (137-241)||(3122-3226)
scaffold0317 (18-91)||(3009-3082)
[»] scaffold0004 (2 HSPs)
scaffold0004 (138-241)||(319741-319844)
scaffold0004 (47-103)||(200318-200374)
[»] scaffold0706 (1 HSPs)
scaffold0706 (135-241)||(4912-5018)
[»] scaffold0367 (1 HSPs)
scaffold0367 (135-241)||(8724-8830)
[»] scaffold0072 (1 HSPs)
scaffold0072 (135-241)||(54542-54648)
[»] scaffold1517 (1 HSPs)
scaffold1517 (22-238)||(1193-1409)
[»] scaffold0188 (1 HSPs)
scaffold0188 (18-238)||(33078-33298)
[»] scaffold0405 (1 HSPs)
scaffold0405 (47-238)||(6009-6200)
[»] scaffold0222 (2 HSPs)
scaffold0222 (135-238)||(193-296)
scaffold0222 (135-228)||(21309-21402)
[»] scaffold0865 (1 HSPs)
scaffold0865 (135-229)||(987-1081)
[»] scaffold0679 (1 HSPs)
scaffold0679 (135-229)||(750-844)
[»] scaffold0133 (1 HSPs)
scaffold0133 (135-229)||(28000-28094)
[»] scaffold0098 (1 HSPs)
scaffold0098 (135-229)||(25955-26049)
[»] scaffold0020 (2 HSPs)
scaffold0020 (135-241)||(98286-98392)
scaffold0020 (47-193)||(176394-176540)
[»] scaffold0192 (1 HSPs)
scaffold0192 (18-203)||(29905-30090)
[»] scaffold0335 (1 HSPs)
scaffold0335 (23-226)||(4022-4225)
[»] scaffold0046 (1 HSPs)
scaffold0046 (23-238)||(70491-70706)
[»] scaffold0026 (1 HSPs)
scaffold0026 (47-226)||(52058-52237)
[»] scaffold1299 (1 HSPs)
scaffold1299 (135-237)||(1555-1657)
[»] scaffold0348 (1 HSPs)
scaffold0348 (47-241)||(17187-17381)
[»] scaffold0235 (2 HSPs)
scaffold0235 (135-241)||(8165-8271)
scaffold0235 (135-241)||(18379-18485)
[»] scaffold0067 (4 HSPs)
scaffold0067 (135-241)||(48883-48989)
scaffold0067 (135-241)||(57917-58023)
scaffold0067 (135-238)||(30119-30222)
scaffold0067 (135-241)||(64305-64411)
[»] scaffold0476 (1 HSPs)
scaffold0476 (135-238)||(251-354)
[»] scaffold0003 (1 HSPs)
scaffold0003 (47-238)||(203788-203979)
[»] scaffold1032 (1 HSPs)
scaffold1032 (135-241)||(518-624)
[»] scaffold0664 (2 HSPs)
scaffold0664 (135-221)||(7533-7619)
scaffold0664 (184-241)||(1-58)
[»] scaffold0585 (1 HSPs)
scaffold0585 (32-190)||(615-772)
[»] scaffold0518 (1 HSPs)
scaffold0518 (47-241)||(2238-2432)
[»] scaffold0420 (1 HSPs)
scaffold0420 (135-241)||(9109-9215)
[»] scaffold0261 (2 HSPs)
scaffold0261 (48-238)||(12120-12310)
scaffold0261 (48-238)||(20300-20490)
[»] scaffold0056 (1 HSPs)
scaffold0056 (135-241)||(586-692)
[»] scaffold0035 (2 HSPs)
scaffold0035 (135-241)||(6299-6405)
scaffold0035 (143-196)||(40856-40909)
[»] scaffold0106 (1 HSPs)
scaffold0106 (135-238)||(34832-34935)
[»] scaffold0017 (1 HSPs)
scaffold0017 (135-238)||(4160-4262)
[»] scaffold0130 (1 HSPs)
scaffold0130 (47-177)||(3659-3789)
[»] scaffold0084 (1 HSPs)
scaffold0084 (147-235)||(8730-8818)
[»] scaffold0018 (3 HSPs)
scaffold0018 (142-238)||(23004-23100)
scaffold0018 (47-100)||(9195-9248)
scaffold0018 (48-100)||(23142-23194)
[»] scaffold0009 (2 HSPs)
scaffold0009 (130-238)||(252109-252217)
scaffold0009 (141-185)||(229611-229655)
[»] scaffold1056 (1 HSPs)
scaffold1056 (135-226)||(2214-2305)
[»] scaffold0523 (1 HSPs)
scaffold0523 (135-238)||(5932-6035)
[»] scaffold0064 (1 HSPs)
scaffold0064 (141-204)||(66270-66333)
[»] scaffold0054 (1 HSPs)
scaffold0054 (135-238)||(63245-63348)
[»] scaffold0005 (1 HSPs)
scaffold0005 (47-238)||(263633-263824)
[»] scaffold2062 (1 HSPs)
scaffold2062 (135-241)||(575-681)
[»] scaffold0151 (1 HSPs)
scaffold0151 (135-241)||(245-351)
[»] scaffold0293 (2 HSPs)
scaffold0293 (141-226)||(15911-15996)
scaffold0293 (46-100)||(15816-15870)
[»] scaffold0042 (1 HSPs)
scaffold0042 (147-204)||(36560-36617)
[»] scaffold0001 (3 HSPs)
scaffold0001 (47-100)||(496427-496480)
scaffold0001 (52-105)||(442064-442117)
scaffold0001 (159-195)||(167933-167969)
[»] scaffold0848 (1 HSPs)
scaffold0848 (144-192)||(4763-4811)
[»] scaffold0586 (1 HSPs)
scaffold0586 (141-241)||(67-167)
[»] scaffold0120 (2 HSPs)
scaffold0120 (148-236)||(11771-11859)
scaffold0120 (147-238)||(14591-14682)
[»] scaffold0075 (2 HSPs)
scaffold0075 (147-235)||(48237-48325)
scaffold0075 (147-196)||(55219-55268)
[»] scaffold1914 (1 HSPs)
scaffold1914 (139-238)||(936-1035)
[»] scaffold1433 (1 HSPs)
scaffold1433 (47-202)||(1053-1208)
[»] scaffold0621 (2 HSPs)
scaffold0621 (143-238)||(520-615)
scaffold0621 (143-238)||(4937-5032)
[»] scaffold0490 (1 HSPs)
scaffold0490 (135-238)||(3360-3463)
[»] scaffold0423 (1 HSPs)
scaffold0423 (147-226)||(1350-1429)
[»] scaffold0404 (1 HSPs)
scaffold0404 (47-202)||(8151-8306)
[»] scaffold0108 (1 HSPs)
scaffold0108 (135-238)||(50600-50703)
[»] scaffold0102 (3 HSPs)
scaffold0102 (135-238)||(43193-43296)
scaffold0102 (147-238)||(50051-50142)
scaffold0102 (23-103)||(43081-43161)
[»] scaffold0080 (1 HSPs)
scaffold0080 (141-204)||(32380-32443)
[»] scaffold0239 (1 HSPs)
scaffold0239 (135-241)||(9491-9596)
[»] scaffold0044 (1 HSPs)
scaffold0044 (147-185)||(17667-17705)
[»] scaffold1274 (1 HSPs)
scaffold1274 (47-100)||(25-78)
[»] scaffold0819 (1 HSPs)
scaffold0819 (147-196)||(621-670)
[»] scaffold0505 (1 HSPs)
scaffold0505 (141-238)||(2252-2349)
[»] scaffold0357 (1 HSPs)
scaffold0357 (147-192)||(17729-17774)
[»] scaffold0113 (1 HSPs)
scaffold0113 (130-235)||(17729-17834)
[»] scaffold1881 (1 HSPs)
scaffold1881 (141-193)||(231-283)
[»] scaffold1459 (1 HSPs)
scaffold1459 (141-193)||(843-895)
[»] scaffold0285 (1 HSPs)
scaffold0285 (141-193)||(5499-5551)
[»] scaffold0273 (1 HSPs)
scaffold0273 (141-201)||(541-601)
[»] scaffold0177 (2 HSPs)
scaffold0177 (141-193)||(11107-11159)
scaffold0177 (141-193)||(14792-14844)
[»] scaffold0104 (1 HSPs)
scaffold0104 (23-91)||(43272-43340)


Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 241
Target Start/End: Complemental strand, 20010572 - 20010346
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  20010572 acatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagcactgtagggcttcgggcgactactct 20010473  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  20010472 gacccttattccttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattctgagaaaattctgatctt 20010373  T
Q  215 ctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||||||||||||||||||    
T  20010372 ctgatatccaatggctctcttgatgtc 20010346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 241
Target Start/End: Original strand, 15462546 - 15462772
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||  | ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15462546 acatcaacaggagtctctctccctctaggctgcctctcatcattcaatctctgtttgcctttgttagcaggagcactgtagggcttcgggcgactactct 15462645  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||| || ||||| ||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15462646 gacccttattcctcttctcactcatcaccttgtaatgagctttcgtatcctcctcataaatcctacagctactcaccaactccgagaaaatcctgatctt 15462745  T
Q  215 ctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||||||||||||||||||    
T  15462746 ctgatatccaatggctctcttgatgtc 15462772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 241
Target Start/End: Complemental strand, 14376955 - 14376761
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||| || ||||| || |||| |||||||||||| || |||||||| || ||   ||| |||||  | |||   || |||||||||||     
T  14376955 cctctcatcattcaacctctgttttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgctccttcgatcactcatcaccttg 14376856  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| || || ||||||||||| || || |||||||| ||||| || |||||  | ||||||||||||||||||||| |||||||||||||    
T  14376855 taatgagctttcgtgtcctcctcatagatcctgcagctactaaccaattcagagaagtttctgatcttctgatacccaatgtctctcttgatgtc 14376761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 21566942 - 21566839
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| |||| ||| |||||||| ||||||||||| || |||||||| || ||| |||||||||||||||| |||||||| ||||    
T  21566942 ctcatcaccttgtaatgagcttttgaatcttcctcatagattctacagctgcttaccaactcagaaaaagtcctgatcttctgatagccaatggccctct 21566843  T
Q  235 tgat 238  Q
    ||||    
T  21566842 tgat 21566839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 19438219 - 19438438
Alignment:
Q  22 caggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctt 121  Q
    ||||||| | ||||| ||| |||  |||||||||||| || || || || || |||| |||||||||||| || |||||||| || ||   ||| |||||    
T  19438219 caggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatatggcttcggacgactctgctgtccctt 19438318  T
Q  122 atttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatac 221  Q
    |  |||  | || ||||  ||||| |||| |||||| |||||||| ||||| || |||||||| || |||||||| || ||  | |||||||||||||||    
T  19438319 acctctcctttcactcactaccttgtaataagccttcgtatcctcttcatagatcctacagctgcttaccaactcagaaaagtttctgatcttctgatac 19438418  T
Q  222 ccaatggctctcttgatgtc 241  Q
    ||||||||||||||||||||    
T  19438419 ccaatggctctcttgatgtc 19438438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 18797932 - 18798126
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||||||||| || || |||| |||||||||||| || |||||||| || ||   ||| |||||   |||    || |||||||||||     
T  18797932 cctctcatcattcaatctttgctttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctgcggtcactcatcaccttg 18798031  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| | ||| ||||| ||||| ||||| |||||||| |||||||| |||||  | ||||||||||| || ||||| || |||||||||||    
T  18798032 taatgagcttctgtgtcctcttcatagattctgcagctacttaccaactcagagaagtttctgatcttctggtatccaatagccctcttgatgtc 18798126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 10465804 - 10465696
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||||||||| |||||||| ||||| || |||||||| || || ||||| ||||||||||| |||||||  || |||||||||||||| || ||    
T  10465804 tctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaactctaatcttctgataccctatagc 10465705  T
Q  230 tctcttgat 238  Q
     ||||||||    
T  10465704 cctcttgat 10465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 19486333 - 19486278
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcg 102  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  19486333 cctctcatcattcaatctttgcttccctttgtcagcaggagcactgtagggcttcg 19486278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 19881726 - 19881829
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| ||||||||||||| ||| || ||||| ||||| |||||||| | |||||| || | | | |||||||||||||| |||||||| ||||    
T  19881726 ctcatcaccttgtaatgagcctttgaatcttcttcatagattctgcagctacttatcaactcggaaagagttctgatcttctgataaccaatggccctct 19881825  T
Q  235 tgat 238  Q
    ||||    
T  19881826 tgat 19881829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 226
Target Start/End: Complemental strand, 8720759 - 8720565
Alignment:
Q  32 tctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttc 131  Q
    ||||| |||||||  ||||||||||||||||||  |||  ||||||||  |||||||||||||||| ||||| || |     |||||||| || ||   |    
T  8720759 tctcctcttaggcctcctctcatcattcaatctaggttcccctttgtttacaggagcactgtagggtttcggacgaccttgttgacccttgttcctccgc 8720660  T
Q  132 tcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaat 226  Q
    ||| || | | ||| || ||||| || |||||||||||||| || |||||||||||||||||||| || ||  |||| ||||||||||| |||||    
T  8720659 tcgttcctaatcttgtagtgagctttggtatcctcctcatatatcctacagctactcaccaactcggaaaagttccttatcttctgataaccaat 8720565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 21474914 - 21474993
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||| || ||||| || || ||| |||| |||||    
T  21474914 ctcatcaccttataatgagcttttgtatcctcttcataaatcctacagctgcttaccaattcagaaaaattccttatctt 21474993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 25771062 - 25771253
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | ||||| |||||||  ||||||||||||||  || ||||| ||||||| |||||||||||| || || | ||| || ||    || ||||||    
T  25771062 aggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggttacggacgactctgttgtccctta 25771161  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
      |||   ||| ||||||||  |||||||||| ||||||||||| |||||||| |||||||| || |||||||| || ||| |||| |||||    
T  25771162 cctctgcgctcactcatcactctataatgagcttttgtatcctcttcataaatcctacagctgcttaccaactcagaaaaattccttatctt 25771253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 34642536 - 34642430
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| ||||||||| ||| ||| || ||||| ||||| |||||||| | |||||| || | | | |||||||| ||||| |||||||| ||||    
T  34642536 ctcatcaccttgtaatgagcccttgaatcttcttcatagattctgcagctacttatcaactcagaaagagttctgatcttttgatagccaatggccctct 34642437  T
Q  235 tgatgtc 241  Q
    |||||||    
T  34642436 tgatgtc 34642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 16813882 - 16813938
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    |||||||||||||||||| ||||  ||||||||  |||||||||||||||| |||||    
T  16813882 cctctcatcattcaatctctgttcccctttgtttacaggagcactgtagggtttcgg 16813938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 18404875 - 18404787
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    ||||||| ||| ||||||||||||||||| || || || ||||||| ||| |||||||  | ||||||||| || ||||| ||||||||    
T  18404875 taatgagtcttggtatcctcctcataaatcctgcaactgctcaccagctcagagaaaactcggatcttctggtaaccaattgctctctt 18404787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 19456265 - 19456309
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcact 91  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||    
T  19456265 cctctcatcattcagcctttgttttcctttgtcagcaggagcact 19456309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 19466410 - 19466454
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcact 91  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||    
T  19466410 cctctcatcattcagcctttgttttcctttgtcagcaggagcact 19466454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 241
Target Start/End: Complemental strand, 20853758 - 20853532
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  20853758 acatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagcactgtagggcttcgggcgactactct 20853659  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  20853658 gacccttattccttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattctgagaaaattctgatctt 20853559  T
Q  215 ctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||||||||||||||||||    
T  20853558 ctgatatccaatggctctcttgatgtc 20853532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 18273191 - 18273358
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||||||||| |  ||||||| | |||||||||||||||||||||| || |    ||||||||| || ||   ||| ||| | ||||||    
T  18273191 cctctcatcattcaatctttgctcccctttgtcaacaggagcactgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaacctta 18273290  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || || || | |||||||||    
T  18273291 taatgagccttcgtatcctcctcataaattctacagctactcaccaattcagaaaatagcctgatctt 18273358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 24096610 - 24096390
Alignment:
Q  18 tcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgac 117  Q
    ||||||||||| | ||||| ||| |||  ||||||||||||||  || ||||| ||||||| |||||||||||| || || || || || ||    || |    
T  24096610 tcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactataaggtttaggacgactctgttgtc 24096511  T
Q  118 ccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctg 217  Q
    ||||| |||||  ||| ||| ||||||| |||||||| || || || |||||||| || || ||||| ||||||||||| |||||||| || ||||||||    
T  24096510 ccttacttcttcgctcactcgtcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaattctaatcttctg 24096411  T
Q  218 atacccaatggctctcttgat 238  Q
    ||||||||| ||||| |||||    
T  24096410 atacccaatagctcttttgat 24096390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 21742542 - 21742327
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | ||||| |||||||  |||||||||||||| ||| || || || |||| || ||||||||| || || ||||| || ||   ||| ||||||    
T  21742542 aggagcatctctcctcttaggcctcctctcatcattcagtctctgcttacccttgtcagtaggagcactatacggtttcggacgactctactgtccctta 21742443  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacc 222  Q
      |||   ||| ||||||||||| |||||||| || |||||||| ||||| || || ||||||||||||||||| |||||||| || ||||||| ||| |    
T  21742442 cctctgcgctcactcatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctactcaccaactcagagaaaattcttatcttctcataac 21742343  T
Q  223 caatggctctcttgat 238  Q
    |||| || ||||||||    
T  21742342 caatagccctcttgat 21742327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 19857786 - 19857892
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| ||||||||||| |||||||| ||||| ||  ||||||| || |||||||| || ||  | || ||||||||||| |||||||||||||    
T  19857786 ctcatcaccttgtaatgagccttagtatcctcttcatagatcttacagctgcttaccaactcagaaaagtttctaatcttctgatagccaatggctctct 19857885  T
Q  235 tgatgtc 241  Q
    |||||||    
T  19857886 tgatgtc 19857892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 16670746 - 16670683
Alignment:
Q  175 ttctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||| |||||||||||||| || |||||||| |||||||||||||| || |||||||| |||||    
T  16670746 ttctgcagctactcaccaattctgagaaaattctgatcttctgatatcctatggctcttttgat 16670683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 22402085 - 22402130
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcacca 192  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||    
T  22402085 taatgagccttagtatcctcctcataaatcctgcagctactcacca 22402130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 21176854 - 21176906
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||||| |||||||||||||| |||||||| ||| |||||||    
T  21176854 accttgtaatgagccttggtatcctcctcatagattctacaactattcaccaa 21176906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 21738914 - 21738811
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || |||||||| ||||| || || |||||||| ||||| || || ||| |||| | ||| ||||| ||||| || ||||    
T  21738914 ctcatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctacttaccaattcagaaaaattccttaccttttgatagccaatagccctct 21738815  T
Q  235 tgat 238  Q
    ||||    
T  21738814 tgat 21738811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 22435615 - 22435560
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    ||||| ||||||||||| |||||||||||||| ||||||||| |  ||||||||||    
T  22435615 accttgtaatgagccttggtatcctcctcatagattctacagttgttcaccaactc 22435560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 31536880 - 31536769
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | ||| |||||||| || || || || |||||||||||||| ||  | |||||||| ||||| |  ||||||| |||||||||||| ||    
T  31536880 tctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagactctgatctgctgatacccaatagc 31536781  T
Q  230 tctcttgatgtc 241  Q
    ||| ||||||||    
T  31536780 tcttttgatgtc 31536769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 20832779 - 20832673
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || ||||| |  ||||| ||||||||||| |||||||||| ||| ||  | || || ||||| || ||||| || ||||    
T  20832779 ctcatcaccttgtaatgagctttcgtatcttattcatagattctacagctgctcaccaacttcgaaaagtttctaattttctggtatccaatagccctct 20832680  T
Q  235 tgatgtc 241  Q
    |||||||    
T  20832679 tgatgtc 20832673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 38909692 - 38909598
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| || || || || |||||||||||||| ||  | |||||||| ||||| |  ||||||| |||||||||||| ||||| ||||||||    
T  38909692 taatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagactctgatctgctgatacccaatagctcttttgatgtc 38909598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 52989264 - 52989358
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| || || || || |||||||||||||| ||  | |||||||| ||||| |  ||||||| |||||||||||| ||||| ||||||||    
T  52989264 taatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagagaagactctgatctgctgatacccaatagctcttttgatgtc 52989358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 20081242 - 20081185
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||||||||| ||||||||||| ||||| || || || ||||||||||| |||||||    
T  20081242 taatgagccttggtatcctcctcgtaaatactgcaactgctcaccaactcggagaaaa 20081185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 20297890 - 20297999
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | ||| |||||||| || || || || |||||||||||||| ||  | |||||||| || || | | |||||| |||||||||||||||    
T  20297890 tctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagaaaacaccatgatctactgatacccaatggc 20297989  T
Q  230 tctcttgatg 239  Q
    ||| ||||||    
T  20297990 tcttttgatg 20297999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 22496128 - 22496031
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||| ||||||||||| ||||||||||| ||||| || || || ||||||| ||| |||||||  | |||| |||| || ||||| || ||||||||    
T  22496128 accttgtaatgagccttggtatcctcctcgtaaatcctgcaactgctcaccagctcggagaaaactcggatcatctggtaaccaattgccctcttgat 22496031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 24784729 - 24784677
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| |||||||||||  ||||||||||||| |||||||||||  |||||||    
T  24784729 accttgtaatgagccttgttatcctcctcatagattctacagctgttcaccaa 24784677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 15 - 241
Target Start/End: Original strand, 22465210 - 22465436
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  22465210 acatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttatttgcctttgttagtaggagcactgtagggcttcgggcgactactct 22465309  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||  |||||||    
T  22465310 gacccttattccttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattatgagaaaattatgatctt 22465409  T
Q  215 ctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||||||||||||||||||    
T  22465410 ctgatatccaatggctctcttgatgtc 22465436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 46 - 238
Target Start/End: Original strand, 20779204 - 20779396
Alignment:
Q  46 gcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctt 145  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  20779204 gcctctcatcattcaatctttgtttgcctttgttagcaggggcactgtagggcttcgggcggctactctgtcccttattcctcttctcgctcatcacctt 20779303  T
Q  146 ataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||| ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||| || |||| ||| |||||    
T  20779304 atagtgagcctttgtatcctcctcataaattctacagctgctcaacaattccgagaaaattctgatcttctgatatcctatggatcttttgat 20779396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 20824713 - 20824933
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| ||| |||| ||  |  | ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  20824713 acatcaacaggagcatttttccctttttgtggtctctcatcattcaatctctgttttcctttattagcaggagcactgtagggcttcgggcggctactct 20824812  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||| || ||||||||||||||||| ||||||| ||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||||||    
T  20824813 gacccttattcctcttctcgctcatcaccttgtaatgagtcttcgtatcctcctcgtaaattctgcagctactcaccaattctgagaaaattctgatctt 20824912  T
Q  215 ctgatacccaatggctctctt 235  Q
    |||||||||||||||||||||    
T  20824913 ctgatacccaatggctctctt 20824933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 48 - 238
Target Start/End: Complemental strand, 28892017 - 28891827
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttat 147  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |    
T  28892017 ctctcatcattcaatctctatttgcctttgttagcaggagcactgtagggcttcgggcggctactctgtcccttattccttttctcactcatcaccttgt 28891918  T
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||| || |||||||| |||||||||||||| || |||||||| |||||    
T  28891917 aatgagccttcgtatcctcctcataaattctgcagcaactcaccaattctgagaaaattctgatcttctgatatcctatggctcttttgat 28891827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 20770512 - 20770621
Alignment:
Q  129 ttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatgg 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| || ||||    
T  20770512 ttctcgctcatcaccttatagtgagcctttgtatcctcctcataaattctacagctcctcaccaattccgagaaaattctgatcttctgatatcctatgg 20770611  T
Q  229 ctctcttgat 238  Q
     ||| |||||    
T  20770612 atcttttgat 20770621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 21561101 - 21560955
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| || |    |||||| || || ||  |||| ||||| ||||||    
T  21561101 cctctcatcattcaatctttgtttccctttgtcagcagtagcactgtagggcttcggacgaccttgctgacctttgttcctcctctcactcataacctta 21561002  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||| | || || |||||||||||||||||||||||||| ||||||||    
T  21561001 taacgggctttcgtatcctcctcataaattctacagctgctcaccaa 21560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 227
Target Start/End: Complemental strand, 21983253 - 21983073
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||||||||| || ||||||| ||||||| |||||||||||||||| || |    |||||| || || ||   ||| ||||| | ||||    
T  21983253 cctctcatcattcaatctttgcttccctttgtcagcaggaacactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataaactta 21983154  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatg 227  Q
    |||||||| || |||||||||||||||||||||||||| ||||| || || || ||  | |||||||| ||||| ||||||    
T  21983153 taatgagctttcgtatcctcctcataaattctacagctgctcacaaattcagaaaattttctgatcttttgataaccaatg 21983073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 23563156 - 23563050
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||| ||| |||||||| || || |||||||||||||| || |||||||| ||||| |   ||||| | || ||||||||||| |||||||||||||    
T  23563156 ctcatcatcttgtaatgagctttagtgtcctcctcataaatcctgcagctacttaccaaattaaagaaatttctaatcttctgataaccaatggctctct 23563057  T
Q  235 tgatgtc 241  Q
    |||||||    
T  23563056 tgatgtc 23563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 23077898 - 23077790
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| ||||| |||||||| || || || |||||||| || || ||||| || |||||||| |||||||| || ||||||||||||||||| ||    
T  23077898 tctcactcattaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaattctaatcttctgatacccaatagc 23077799  T
Q  230 tctcttgat 238  Q
    ||| |||||    
T  23077798 tcttttgat 23077790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 16258016 - 16257918
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||| || |||||||||||||| || || |||||| |||||||||| || || |  ||||||| |||||||||||| |||||||| |||||    
T  16258016 cttatagtgagctttggtatcctcctcatatatcctgcagctattcaccaactcggaaaagactctgatctgctgatacccaatagctctcttaatgtc 16257918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 22591735 - 22591637
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||| || |||||||||||||| || || |||||| |||||||||| || || |  ||||||| |||||||||||| |||||||| |||||    
T  22591735 cttatagtgagctttggtatcctcctcatatatcctgcagctattcaccaactcggaaaagactctgatctgctgatacccaatagctctcttaatgtc 22591637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 22595290 - 22595192
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||| || |||||||||||||| || || |||||| |||||||||| || || |  ||||||| |||||||||||| |||||||| |||||    
T  22595290 cttatagtgagctttggtatcctcctcatatatcctgcagctattcaccaactcggaaaagactctgatctgctgatacccaatagctctcttaatgtc 22595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 23669899 - 23669980
Alignment:
Q  22 caggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    ||||||| | ||||| ||||||   ||||||||||||||||||||| |  ||||||| | ||||||||||||||||||||||    
T  23669899 caggagcatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacaggagcactgtagggcttcgg 23669980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 25851447 - 25851558
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | ||| |||||||| || || || || ||||||||||| || ||| | |||||||| |||||||  ||||||| |||||||||||| ||    
T  25851447 tctcactcattatcttgtaatgagctttggtgtcttcttcataaattctgcacctattaaccaactcagagaaaactctgatctgctgatacccaatagc 25851546  T
Q  230 tctcttgatgtc 241  Q
    ||| ||||||||    
T  25851547 tcttttgatgtc 25851558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 28911736 - 28911673
Alignment:
Q  175 ttctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||| |||||||||||||| || |||||||| |||||||||||||| || |||||||| |||||    
T  28911736 ttctgcagctactcaccaattctgagaaaattctgatcttctgatatcctatggctcttttgat 28911673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 28927004 - 28926941
Alignment:
Q  175 ttctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||| |||||||||||||| || |||||||| |||||||||||||| || |||||||| |||||    
T  28927004 ttctgcagctactcaccaattctgagaaaattctgatcttctgatatcctatggctcttttgat 28926941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 43122759 - 43122941
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcg-gctactctgacccttatttcttttctcgctcatcacctt 145  Q
    ||||||||||||||||||||| |  ||||||| | || ||||||||||||||||||| ||  ||  | |||||||| || ||   |||  || | |||||    
T  43122759 cctctcatcattcaatctttgctctcctttgtcaacatgagcactgtagggcttcggccgatcttgt-tgacccttgttcctccgctcattcctaacctt 43122857  T
Q  146 ataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    ||| ||||| || ||||||||||| ||||| |||||||| |||||||| || || ||| | || ||||| || |||||||||||    
T  43122858 atagtgagctttcgtatcctcctcgtaaatcctacagctgctcaccaattcagaaaaatttcttatcttttggtacccaatggc 43122941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 23537197 - 23537153
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagcta 185  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  23537197 accttgtaatgagccttggtatcctcctcataaattctgcagcta 23537153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 20345657 - 20345768
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | ||| |||||||| || || || |||||||||||||| || ||| | |||||||| || || |  ||||||| |||||||||||| ||    
T  20345657 tctcactcattatcttgtaatgagctttggtgtcttcctcataaattctgcacctattaaccaactcagaaaagactctgatctgctgatacccaatagc 20345756  T
Q  230 tctcttgatgtc 241  Q
    ||| ||||||||    
T  20345757 tcttttgatgtc 20345768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 20804001 - 20804056
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    ||||| ||||||||||| |||||||||||||| ||||| |||||| | ||||||||    
T  20804001 accttgtaatgagccttggtatcctcctcatagattctgcagctatttaccaactc 20804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 21870266 - 21870163
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || |||||||| ||||| || || |||||||| ||||| || || ||  |||| ||||| ||||| ||||| || ||||    
T  21870266 ctcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaattcagaaaagttccttatcttttgatagccaatagccctct 21870167  T
Q  235 tgat 238  Q
    ||||    
T  21870166 tgat 21870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 21874546 - 21874443
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || |||||||| ||||| || || |||||||| ||||| || || ||  |||| ||||| ||||| ||||| || ||||    
T  21874546 ctcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaattcagaaaagttccttatcttttgatagccaatagccctct 21874447  T
Q  235 tgat 238  Q
    ||||    
T  21874446 tgat 21874443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 23526461 - 23526552
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||||||||||||| |||||||||||||| || || ||  |||||||||| |||||||  | |||||  || || ||||| |||||||||||    
T  23526461 taatgagcctttgtgtcctcctcataaatcctgcaactgttcaccaactcggagaaaactcggatctgttggtatccaattgctctcttgat 23526552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 17266322 - 17266216
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || |||||||| || || ||||||| ||| ||||| || |||||||| || ||||  || || || || || ||||    
T  17266322 ctcatcaccttataatgagctttggtgtcctcctcgtagatcctacagcgacttaccaaatcagagaaaattctaatctgttggtatcctatagccctct 17266223  T
Q  235 tgatgtc 241  Q
    |||||||    
T  17266222 tgatgtc 17266216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 21410540 - 21410593
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    |||||||||||| || || || || ||||||||||| |||||||||||||||||    
T  21410540 cttataatgagctttggtgtcatcttcataaattctgcagctactcaccaactc 21410593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 26735704 - 26735659
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcacca 192  Q
    ||||||||||| |||||||||||||||||||| || || |||||||    
T  26735704 taatgagccttagtatcctcctcataaattctgcaactgctcacca 26735659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 1655 - 1845
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  1655 acatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagaactgtagggcttcgggcgactactct 1754  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaat 205  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  1755 gacccttattccttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattctgagaaaat 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 148; Significance: 3e-78; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 238
Target Start/End: Original strand, 70747 - 70970
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||| |||||||    
T  70747 acatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcaggaacaatgtagggcttcgggcgactactct 70846  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| || |||||| | ||||||||    
T  70847 gacccttattcctcttctcgctcatcaccttatagtgagcctttgtatcctcctcataaatcatacagctactcaccaattcagagaaatttctgatctt 70946  T
Q  215 ctgatacccaatggctctcttgat 238  Q
    |||||||||||||||||| |||||    
T  70947 ctgatacccaatggctcttttgat 70970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 241
Target Start/End: Complemental strand, 11803 - 11609
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||| | ||| || || ||||||| |||||||||||| || || || || || ||   ||| ||||||  |||| |||| ||||||||||||    
T  11803 cctctcatcattaagtctctgctttcctttgtcagcaggagcactatatggtttaggacgactctgctgtcccttacctcttctctcactcatcacctta 11704  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    ||||||||||| || ||||| ||||| || || ||||| || ||||| || ||||||||  | ||||| |||||||| |||||||||||||||||    
T  11703 taatgagccttagtgtcctcttcatatatcctgcagctgcttaccaaatcagagaaaattttaatcttttgataccctatggctctcttgatgtc 11609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 1761 - 1655
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || ||||| || ||||| ||  | | |||||||||||| || |||||||| || |||||||||||||||||||||||||    
T  1761 ctcatcaccttgtaatgagctttagtatcttcttcatatatcatgctgctactcaccaaatcagagaaaattcttatcttctgatacccaatggctctct 1662  T
Q  235 tgatgtc 241  Q
    |||||||    
T  1661 tgatgtc 1655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 121979 - 121924
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    ||||| ||||||||||| |||||||||||||| ||||| |||||| ||||||||||    
T  121979 accttgtaatgagccttggtatcctcctcatagattctgcagctattcaccaactc 121924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 48 - 235
Target Start/End: Complemental strand, 93790 - 93603
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttat 147  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |    
T  93790 ctctcatcattcaatctcggtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttattcctcttctcgctcatcaccttgt 93691  T
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||| || |||||||||||    
T  93690 aatgagccttcgtatcctcctcataaattctgcagctactcaccaattctgagaaaattctgatcttctgatatcctatggctctctt 93603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 238
Target Start/End: Original strand, 27903731 - 27903953
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||| |||||||    
T  27903731 acatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcaggaacattgtagggcttcgggcgactactct 27903830  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    | |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| || |||||| | ||||||||    
T  27903831 ggcccttattcctcttctcgctcatcaccttatagtgagcctttgtatcctcctcataaatcttacagctactcaccaattcagagaaatttctgatctt 27903930  T
Q  215 ctgatacccaatggctctcttgat 238  Q
    ||||||||| ||| ||||||||||    
T  27903931 ctgataccc-atgactctcttgat 27903953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 13879487 - 13879654
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||||||||| |  ||||||| | |||||||||||||||||||||| || |    ||||||||| || ||   ||| ||| | ||||||    
T  13879487 cctctcatcattcaatctttgctaccctttgtcatcaggagcactgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaacctta 13879586  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| || || || |||||||||||    
T  13879587 taatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaatatcctgatctt 13879654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 16151102 - 16151208
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || |||||  || |||||||||||||||||||||||||||    
T  16151102 ctcatcaccttgtaatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcatgatcttctgatacccaatggctctct 16151201  T
Q  235 tgatgtc 241  Q
    |||||||    
T  16151202 tgatgtc 16151208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 16155248 - 16155354
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || |||||  || |||||||||||||||||||||||||||    
T  16155248 ctcatcaccttgtaatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcatgatcttctgatacccaatggctctct 16155347  T
Q  235 tgatgtc 241  Q
    |||||||    
T  16155348 tgatgtc 16155354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 15073737 - 15073904
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||| ||| |||||  |||||| |||||||||||| || || ||||| || ||   ||| ||||||  |||   ||| ||||||||||||    
T  15073737 cctctcatcattcagtctctgtttaactttgtcagcaggagcactatacggtttcggacgactcagctgtcccttacctctacgctcactcatcacctta 15073836  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||| ||||||||||| ||||| || ||||||||||||||||| || || ||| |||| |||||    
T  15073837 taatgagcttttgtatcctcttcatagatcctacagctactcaccaaatcagaaaaattccttatctt 15073904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 15267242 - 15267348
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || |||||||||||||| || |||||||| | ||| || |||||  | || || |||||||| |||||||||||||    
T  15267242 ctcatcaccttgtaatgagctttcgtgtcctcctcataaatcctgcagctacttatcaaatcagagaagtttcttattttctgataaccaatggctctct 15267341  T
Q  235 tgatgtc 241  Q
    |||||||    
T  15267342 tgatgtc 15267348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 51603598 - 51603492
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||| ||||||||||| || || |||||||| || || ||||||| ||||||||| || |||||||| || |||| ||| || || ||||||||||    
T  51603598 ctcatcactttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctct 51603499  T
Q  235 tgatgtc 241  Q
    |||||||    
T  51603498 tgatgtc 51603492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 53750276 - 53750170
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||| ||||||||||| || || |||||||| || || ||||||| ||||||||| || |||||||| || |||| ||| || || ||||||||||    
T  53750276 ctcatcactttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctct 53750177  T
Q  235 tgatgtc 241  Q
    |||||||    
T  53750176 tgatgtc 53750170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 8709055 - 8709111
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    ||||||||||||||||||||| || ||||||| |||||||||||| ||| |||||||    
T  8709055 cctctcatcattcaatctttgcttccctttgtcagcaggagcactatagagcttcgg 8709111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 8514 - 8602
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    ||||||| ||| |||||||||||||||||||| || || ||||||||||| || || |  | ||||||||| || ||||| ||||||||    
T  8514 taatgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaagacacggatcttctggtaaccaattgctctctt 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 11204043 - 11203932
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | ||| |||||||| || || || || |||||||||||||| ||  | |||||||| ||||| |  ||||||| |||||||||||| ||    
T  11204043 tctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagactctgatctgctgatacccaatagc 11203944  T
Q  230 tctcttgatgtc 241  Q
    ||| ||||||||    
T  11203943 tcttttgatgtc 11203932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 44658677 - 44658566
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | ||| |||||||| || || || || ||||| |||||||| ||  | |||||||| ||||| |  ||||||| |||||| ||||||||    
T  44658677 tctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaactcagagaagactctgatctgctgatatccaatggc 44658578  T
Q  230 tctcttgatgtc 241  Q
    ||||||||||||    
T  44658577 tctcttgatgtc 44658566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 15570 - 15521
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    ||||||| ||| |||||||||||||||||||| || || |||||||||||    
T  15570 taatgagtcttggtatcctcctcataaattctgcaactgctcaccaactc 15521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 14697479 - 14697532
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    ||||||||||||||||||||| || || || | ||||||||||||||| |||||    
T  14697479 cctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctt 14697532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 5e-71; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 48 - 235
Target Start/End: Complemental strand, 10417166 - 10416979
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttat 147  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |    
T  10417166 ctctcatcattcaatctctgtttgcctctgttagcaggagcactgtagggcttcgggcggctactctgacccttattcctcttctcgctcatcaccttgt 10417067  T
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    |||||||||| |||||||||||||||||||| |||||||||||||  || |||||||| |||||||||||||| || |||||||||||    
T  10417066 aatgagccttcgtatcctcctcataaattctgcagctactcaccagttctgagaaaattctgatcttctgatatcctatggctctctt 10416979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 13317723 - 13317500
Alignment:
Q  15 acatcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactct 114  Q
    |||||||||||||| | ||||||| |||||  |||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||||    
T  13317723 acatcaacaggagcatctctccccctaggcctcctctcatcatttaatatttgttttcctttgtcagcaggagcactgtagggcttcgggcgactactct 13317624  T
Q  115 gacccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    | |||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| || ||||| || |||||||||||||||||| |  |||||||    
T  13317623 ggcccttattcctcttctcgctcatcgccttatagtgagcctttgtatcctcctcatatatcctacaactgctcaccaactccgagaaatttatgatctt 13317524  T
Q  215 ctgatacccaatggctctcttgat 238  Q
    |||||| |||||||||||||||||    
T  13317523 ctgatatccaatggctctcttgat 13317500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 31692219 - 31692113
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || ||||||||||| ||||| |||||||| ||||| || |||||  | ||||||||||||||||||||||||||||    
T  31692219 ctcatcaccttataatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttctgatacccaatggctctct 31692120  T
Q  235 tgatgtc 241  Q
    |||||||    
T  31692119 tgatgtc 31692113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 31941998 - 31942104
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || ||||||||||| ||||| |||||||| ||||| || |||||  | ||||||||||||||||||||||||||||    
T  31941998 ctcatcaccttataatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttctgatacccaatggctctct 31942097  T
Q  235 tgatgtc 241  Q
    |||||||    
T  31942098 tgatgtc 31942104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 228
Target Start/End: Original strand, 15230601 - 15230791
Alignment:
Q  38 cttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctc 137  Q
    |||||||  |||||||||||| |||||||| || ||||||| |||||||||||| |||||||| || || |     || || || || || ||||| |||    
T  15230601 cttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactatagggcttaggacgaccttgttggcctttgttcctcttctcactc 15230700  T
Q  138 atcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatgg 228  Q
    || |||||||||||||| || |||||||||||||| ||||||||||||||| ||||||| || ||    |||||||||||||| |||||||    
T  15230701 ataaccttataatgagctttggtatcctcctcatagattctacagctactccccaactcagaaaattgtctgatcttctgataaccaatgg 15230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 228
Target Start/End: Original strand, 15236469 - 15236659
Alignment:
Q  38 cttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctc 137  Q
    |||||||  |||||||||||| |||||||| || ||||||| |||||||||||| |||||||| || || |     || || || || || ||||| |||    
T  15236469 cttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactatagggcttaggacgaccttgttggcctttgttcctcttctcactc 15236568  T
Q  138 atcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatgg 228  Q
    || |||||||||||||| || |||||||||||||| ||||||||||||||| ||||||| || ||    |||||||||||||| |||||||    
T  15236569 ataaccttataatgagctttggtatcctcctcatagattctacagctactccccaactcagaaaattgtctgatcttctgataaccaatgg 15236659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 12857618 - 12857472
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||| || |||||| ||||||| |||||||||||| || || || || || ||   ||| |||||   |||   ||| ||||||||||||    
T  12857618 cctctcatcattcagtccttgtttacctttgtcagcaggagcactatacggttttggacgactctactgtcccttgcctctacgctcactcatcacctta 12857519  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  12857518 taatgagcttttgtatcctcctcatagattctacagctactcaccaa 12857472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 17189351 - 17189570
Alignment:
Q  17 atcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctga 116  Q
    |||||||||||| | ||||| ||| | |  |||||||||||| ||||| || || || |||||||||||||||||||| |||||||| || ||   |||     
T  17189351 atcaacaggagcatctctcctcttggacctcctctcatcattaaatctctgctttcccttgttagcaggagcactgtacggcttcggacgactctgctgg 17189450  T
Q  117 cccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttct 216  Q
    |||||   |||    || ||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||| ||||||||  ||||  | ||||||||||    
T  17189451 cccttgcctctgcggtcactcatcaccttgtaatgagcttttgtgtcctcttcatagattctacagctacttaccaactcaaagaagtttctgatcttct 17189550  T
Q  217 gatacccaatggctctcttg 236  Q
    | || ||||| || ||||||    
T  17189551 ggtatccaatagccctcttg 17189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 17494745 - 17494848
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || |||||||||||||| ||||||||||| || |||||||| || ||  | || ||||||||||| |||||||||||||    
T  17494745 ctcatcaccttgtaatgagctttggtatcctcctcatagattctacagctgcttaccaactcagaaaagtttcttatcttctgataaccaatggctctct 17494844  T
Q  235 tgat 238  Q
    ||||    
T  17494845 tgat 17494848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 18131498 - 18131275
Alignment:
Q  18 tcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgac 117  Q
    ||||||||||| | ||||| ||| |||  |||||||| ||||| ||| ||||| ||||||| |||||||||||| || || || || || ||   ||| |    
T  18131498 tcaacaggagcatctctcctcttgggcctcctctcattattcagtctctgttttcctttgtcagcaggagcactatatggtttaggacgactctgctgtc 18131399  T
Q  118 ccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctg 217  Q
    | |||  |||    || |||||||| || |||||||| || || || || ||||| || ||||||||||||||||  || |||||||| || ||||||||    
T  18131398 ctttacctctccgttcactcatcactttgtaatgagctttagtgtcttcttcatatatcctacagctactcaccatatcagagaaaattcttatcttctg 18131299  T
Q  218 atacccaatggctctcttgatgtc 241  Q
    ||||||||||||||||||||||||    
T  18131298 atacccaatggctctcttgatgtc 18131275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 12357561 - 12357455
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || || || ||||| || || |||||||||||||| || |||||||| || ||||||||||||| |||||||||||    
T  12357561 ctcatcaccttgtaatgagctttagtgtcttcttcatatatcctgcagctactcaccaaatcagagaaaattcttatcttctgatacctaatggctctct 12357462  T
Q  235 tgatgtc 241  Q
    |||||||    
T  12357461 tgatgtc 12357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 238
Target Start/End: Complemental strand, 11958328 - 11958112
Alignment:
Q  22 caggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctt 121  Q
    ||||||| | ||||| |||| ||  ||| |||||||||| ||| ||||| ||||||| ||||||||||||||| || || || ||  |   ||| |||||    
T  11958328 caggagcatctctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgctgtccctt 11958229  T
Q  122 atttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatac 221  Q
    |  |||  |||| ||||||||||| |||||| | ||||| || ||||||||||| |  ||||| || |||||||| |||||||  || ||||||||||||    
T  11958228 acctctcctctcactcatcaccttgtaatgaacttttgtgtcttcctcataaatcccgcagctgcttaccaactcagagaaaactctaatcttctgatac 11958129  T
Q  222 ccaatggctctcttgat 238  Q
    ||||| ||||| |||||    
T  11958128 ccaatagctcttttgat 11958112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 2245706 - 2245612
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||||||||| || ||  | || ||||||||||| ||||||||    
T  2245706 ctcatcaccttataatgagctttggtatcatcctcataaatcctaaagctactcaccaactcagaaaagtttctaatcttctgataaccaatggc 2245612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 8744424 - 8744318
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||| ||||||||||| || || |||||||| || || ||||||| ||||||||| || |||||||| || |||| ||| || || ||||||||||    
T  8744424 ctcatcactttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctct 8744325  T
Q  235 tgatgtc 241  Q
    |||||||    
T  8744324 tgatgtc 8744318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 12181439 - 12181545
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || |||||||||||||| |||||||  || ||||| || |||||  |||| || |||||||| ||||||| |||||    
T  12181439 ctcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagccgcttaccaattcagagaagttccttattttctgatagccaatggttctct 12181538  T
Q  235 tgatgtc 241  Q
    |||||||    
T  12181539 tgatgtc 12181545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 13945119 - 13945224
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || |||||||| || || ||||||| ||||||||| || |||||||| || ||||  || || || ||||||||||    
T  13945119 ctcatcaccttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgttggtatcctatggctctct 13945218  T
Q  235 tgatgt 240  Q
    ||||||    
T  13945219 tgatgt 13945224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 14290678 - 14290463
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | ||||| |||||||  ||||||||||||||  || ||||| ||||||| |||||||||||| || || ||||| || ||   ||| ||||||    
T  14290678 aggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgactctgctgtccctta 14290579  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacc 222  Q
      |||   ||| |||||||| ||||||||||| || |||||||| ||||| |||||||| || ||  |||| || || ||| | || ||||| ||||| |    
T  14290578 cctctgcgctcactcatcactttataatgagctttggtatcctcttcatagattctacaactgctttccaattcagaaaaatttcttatcttttgataac 14290479  T
Q  223 caatggctctcttgat 238  Q
    |||| || ||||||||    
T  14290478 caatagccctcttgat 14290463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 35983164 - 35983379
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | ||||| |||||||  ||||||||||||||  || ||||| ||||||| |||||||||||| || || ||||| |  ||   ||| ||||||    
T  35983164 aggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacaactctgctgtccctta 35983263  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacc 222  Q
      |||   ||| |||||||| ||||||||||| || |||||||| ||||| |||||||| || || ||||| || || ||| | || ||||| ||||| |    
T  35983264 cctctgcactcactcatcactttataatgagctttggtatcctcttcatagattctacaactgcttaccaattcagaaaaatttcttatcttatgataac 35983363  T
Q  223 caatggctctcttgat 238  Q
    |||| || ||||||||    
T  35983364 caatagccctcttgat 35983379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 2036938 - 2036840
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||| || |||||||||||||| || || |||||| |||||||||| || || |  ||||||| |||||||||||| |||||||| |||||    
T  2036938 cttatagtgagctttggtatcctcctcatatatcctgcagctattcaccaactcggaaaagactctgatctgctgatacccaatagctctcttaatgtc 2036840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 2040679 - 2040581
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||| || |||||||||||||| || || |||||| |||||||||| || || |  ||||||| |||||||||||| |||||||| |||||    
T  2040679 cttatagtgagctttggtatcctcctcatatatcctgcagctattcaccaactcggaaaagactctgatctgctgatacccaatagctctcttaatgtc 2040581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 14039849 - 14039947
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||| ||||| || |||||||||||||| || || |||||| |||||||||| || || |  ||||||| |||||||||||| |||||||| |||||    
T  14039849 cttatagtgagctttggtatcctcctcatatatcctgcagctattcaccaactcggaaaagactctgatctgctgatacccaatagctctcttaatgtc 14039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 16384406 - 16384300
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| ||  | ||||||||||| || ||||||| ||| ||||| || |||||||| || ||||  || || || ||||||||||    
T  16384406 ctcatcaccttataatgagctttgctgtcctcctcatagatcctacagcaacttaccaaatcagagaaaattctaatctgttggtatcctatggctctct 16384307  T
Q  235 tgatgtc 241  Q
    |||||||    
T  16384306 tgatgtc 16384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 16831562 - 16831456
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || ||||||||||| || || || | ||| ||||| || |||||||| || ||||  || ||||| ||||||||||    
T  16831562 ctcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattcttatctgttggtaccctatggctctct 16831463  T
Q  235 tgatgtc 241  Q
    |||||||    
T  16831462 tgatgtc 16831456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 24190399 - 24190501
Alignment:
Q  136 tcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    |||||||||| |||||||| || || ||||| ||||| |||||||||||||| ||||| || |||||  | ||||||||||| || ||||| || |||||    
T  24190399 tcatcaccttgtaatgagctttcgtgtcctcttcatagattctacagctacttaccaaatcagagaagtttctgatcttctggtatccaatagccctctt 24190498  T
Q  236 gat 238  Q
    |||    
T  24190499 gat 24190501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 15066168 - 15066225
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||||||||| ||||| ||||||||||||||||||||  |||||||||| |||||||    
T  15066168 taatgagccttggtatcttcctcataaattctacagctgttcaccaactcggagaaaa 15066225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 19727757 - 19727810
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||| |||||    
T  19727757 cctctcatcattcaatctttgtttgcccttatcagcaggagcactgtaaggctt 19727810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 12502024 - 12502076
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||| | |||||||||||||| |||||||||||| |||||||    
T  12502024 accttgtaatgagccctggtatcctcctcatagattctacagctattcaccaa 12502076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 15008706 - 15008650
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    ||||||||||||||||||||| |  ||||||| | || |||||||||||||||||||    
T  15008706 cctctcatcattcaatctttgctctcctttgtcaacatgagcactgtagggcttcgg 15008650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 16803986 - 16803942
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagcta 185  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  16803986 accttgtaatgagccttggtatcctcctcataaattctgcagcta 16803942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 24190311 - 24190367
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    |||||||||||||||||| || || || |||| ||||||||||||||| ||||||||    
T  24190311 cctctcatcattcaatctctgctttcccttgtcagcaggagcactgtacggcttcgg 24190367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 11861444 - 11861499
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    ||||| ||||||||||| || || |||||||| |||||||||||| ||||||||||    
T  11861444 accttgtaatgagccttggtgtcttcctcatagattctacagctattcaccaactc 11861499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 16825313 - 16825210
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || ||||| || ||||| || |||||||| || |||||||| || ||  | || ||||||||||| ||||| || ||||    
T  16825313 ctcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagtttcttatcttctgataaccaatagccctct 16825214  T
Q  235 tgat 238  Q
    ||||    
T  16825213 tgat 16825210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 47127034 - 47127145
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | |||||||||||| || || || || ||||| ||||| || ||| | |||||||| ||||| |  ||||||| |||||||||||| ||    
T  47127034 tctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactctgatctgctgatacccaatagc 47127133  T
Q  230 tctcttgatgtc 241  Q
    ||| ||||||||    
T  47127134 tcttttgatgtc 47127145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 48 - 235
Target Start/End: Complemental strand, 180735 - 180548
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttat 147  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |    
T  180735 ctctcatcattcaatctctgtttgcctctgttagcaggagcactgtagggcttcgggcgactactctgacccttattcctcttctcgctcatcaccttgt 180636  T
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    |||||||||| |||||||||||||||||||| |||||||||||||  || |||||||| |||||||||||||| || |||||||||||    
T  180635 aatgagccttcgtatcctcctcataaattctgcagctactcaccatttctgagaaaattctgatcttctgatatcctatggctctctt 180548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 39142 - 39038
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || ||||| |||||||| || || |||||||||||||||||  ||||||| || |||||||| ||||||||||||||||    
T  39142 ctcatcaccttgtaatgagctttagtatcttcctcatatatcctgcagctactcaccaactc--agaaaattctaatcttctggtacccaatggctctct 39045  T
Q  235 tgatgtc 241  Q
    |||||||    
T  39044 tgatgtc 39038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 886 - 1105
Alignment:
Q  22 caggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctt 121  Q
    ||||||| | ||||| |||||||  |||||||||||||||||| || || || |||| |||||||||||| || || || || || ||    || |||||    
T  886 caggagcatctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtccctt 985  T
Q  122 atttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatac 221  Q
    |  |||   ||| ||||||||||| |||||||||||  ||||||||||||| ||||| ||||||||||||||||| |||||||| || ||||||||||||    
T  986 acctctgcgctcactcatcaccttgtaatgagccttattatcctcctcatatattctgcagctactcaccaactcagagaaaattctaatcttctgatac 1085  T
Q  222 ccaatggctctcttgatgtc 241  Q
    ||||||||||||||||||||    
T  1086 ccaatggctctcttgatgtc 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 238
Target Start/End: Complemental strand, 65214 - 65028
Alignment:
Q  52 catcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttataatg 151  Q
    ||||||||| ||| || ||||| || | |||||| ||||| || ||||||||||| ||    || || ||||| ||| |||| ||||||||||| |||||    
T  65214 catcattcagtctctgcttgcccttatcagcaggggcactatatggcttcgggcgactctgttgtccattattccttctctcactcatcaccttgtaatg 65115  T
Q  152 agcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||| |||||||| |||||||||||||||||    
T  65114 agcttttgtatcctcttcataaattctgcagctactcaccaactcagagaaatttctgattttctgataaccaatggctctcttgat 65028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 62693 - 62478
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | ||||| |||||||  |||||||||||||||||| || || || |||| |||||| ||||| || |||||||| || ||   ||| |||||     
T  62693 aggagcatctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgccccttg 62594  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacc 222  Q
      |||   ||| ||||||||||| |||||||| || |||||||| ||||| || || |||||||| |||||||| |||||| |||| ||||| ||||| |    
T  62593 cctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaactcagagaaattccttatcttttgatagc 62494  T
Q  223 caatggctctcttgat 238  Q
    |||| || ||||||||    
T  62493 caatagccctcttgat 62478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 20391530 - 20391712
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || |    |||||| || || ||   ||| ||||| ||||||    
T  20391530 cctctcatcattcaatctttgtttccctttgtcagcaggagcactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataacctta 20391629  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||||||| || |||||||| ||||||||||||||||| |||||||| || || ||   ||||||||| ||||||||||||||    
T  20391630 taatgagctttggtatcctcttcataaattctacagctgctcaccaattcagaaaattgcctgatcttttgatacccaatggc 20391712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 220
Target Start/End: Complemental strand, 6606806 - 6606633
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||||||||| |  ||| ||| |  |||| |||||||||||||||| || |    ||||||||| || ||   ||| ||| | ||||||    
T  6606806 cctctcatcattcaatctttgctctcctctgtcaataggaacactgtagggcttcggacgtccttgctgacccttgttcctccgctcactcctaacctta 6606707  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgata 220  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| || || || | ||||||||| |||||    
T  6606706 taatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaataccctgatcttttgata 6606633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 21970793 - 21970694
Alignment:
Q  142 ccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||||| || || ||||| ||||||||||| |||||||||||||||||||| || ||  | || ||||||||||| ||||||||||||||||||||    
T  21970793 ccttataatgggctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatggctctcttgatgtc 21970694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 241
Target Start/End: Complemental strand, 22027617 - 22027423
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||||||||| || || |||| |||||| |||||||| || || || || ||   ||| ||||||   |||  ||| ||||||||||||    
T  22027617 cctctcatcattcaatctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttaccacttcgctcactcatcacctta 22027518  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||| | ||||| ||||||||||| || || || | ||| ||||| || |||||||| || ||||  |||||||| |||||||||||||||||    
T  22027517 taatgatcttttgtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattctaatctgttgataccctatggctctcttgatgtc 22027423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 22374401 - 22374480
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    |||||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||| || || ||| |||| |||||    
T  22374401 ctcatcaccttataatgagcttttgtatcctcctgatagatcctacagctactcaccaaatcagaaaaattccttatctt 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 29300680 - 29300569
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| ||||| |||||||| ||||| ||||||||||| || || ||||| || || ||||| |||||||  || ||||||||||||||||| ||    
T  29300680 tctcactcattaccttgtaatgagcttttgtgtcctcctcatatatcctgcagctgcttactaactcagagaaaactctaatcttctgatacccaatagc 29300581  T
Q  230 tctcttgatgtc 241  Q
    ||| ||||||||    
T  29300580 tcttttgatgtc 29300569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 22004323 - 22004225
Alignment:
Q  142 ccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgt 240  Q
    ||||||||||||| || ||||| || |||||||| |||||||||||||||||||  || ||  |  | ||||||||||| |||||||||||||||||||    
T  22004323 ccttataatgagctttggtatcatcttcataaatcctacagctactcaccaacttagaaaagtttataatcttctgataaccaatggctctcttgatgt 22004225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 21928960 - 21929063
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || |||||||| ||||| ||||||||||| || ||||| || || ||| | || ||||||||||| ||||| || ||||    
T  21928960 ctcatcaccttgtaatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaatttcttatcttctgataaccaatagccctct 21929059  T
Q  235 tgat 238  Q
    ||||    
T  21929060 tgat 21929063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 21998682 - 21998584
Alignment:
Q  142 ccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgt 240  Q
    |||||||||| || || ||||| |||||||||||||| |||||||||||||||||  | ||  |  | ||||||||||| ||||||||| |||||||||    
T  21998682 ccttataatgggctttggtatcatcctcataaattcttcagctactcaccaactcaaaaaagtttataatcttctgataaccaatggctttcttgatgt 21998584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 19981505 - 19981602
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||| ||||||||||| ||||||||||| ||||| || || || ||||||| ||| |||||||  | ||||||||| || ||||| || ||||||||    
T  19981505 accttgtaatgagccttggtatcctcctcgtaaatcctgcaactgctcaccagctcggagaaaactcggatcttctggtaaccaattgccctcttgat 19981602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 22054395 - 22054498
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || ||||||||| | || || || | ||||||||| || |||||||| || ||||  || || || ||||||||||    
T  22054395 ctcatcaccttataatgagctttggtgtcctcctcacagatcctgcaacgactcaccaaatcagagaaaattctaatctgttggtatcctatggctctct 22054494  T
Q  235 tgat 238  Q
    ||||    
T  22054495 tgat 22054498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 16268461 - 16268367
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| || || || || |||||||||||||| ||| | |||||||| ||||| |  ||||||| |||||||||||| || || ||||||||    
T  16268461 taatgagctttggtgtcttcttcataaattctacaactattaaccaactcagagaagactctgatctgctgatacccaatagcccttttgatgtc 16268367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 21330108 - 21330162
Alignment:
Q  142 ccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    |||||||||| || || ||||| |||||| |||||||||| ||||||||||||||    
T  21330108 ccttataatgggctttggtatcatcctcaaaaattctacaactactcaccaactc 21330162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 21163767 - 21163710
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||||||||| ||||||||||||||||| || || ||  |||||||||| |||||||    
T  21163767 taatgagccttggtatcctcctcataaatcctgcaactgttcaccaactcggagaaaa 21163710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 22421237 - 22421177
Alignment:
Q  40 taggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    ||||| |||||||||||  || ||| |||||||| || ||||||||||||||||| |||||    
T  22421237 taggccgcctctcatcaaccattctctgtttgcccttattagcaggagcactgtaaggctt 22421177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 22617 - 22723
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||| |||||||||| ||||| ||||||||||| ||||| |||||||| ||||| || |||||||| || |||||||||||||||||||||||||    
T  22617 ctcatcaccatataatgagcttttgtgtcctcctcatagattctgcagctacttaccaaatcagagaaaattcttatcttctgatacccaatggctctct 22716  T
Q  235 tgatgtc 241  Q
    |||||||    
T  22717 tgatgtc 22723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 53250 - 53126
Alignment:
Q  117 cccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttct 216  Q
    ||||||| ||||  ||| ||||||||||||||||||||||| || || |||||||| || || |||||||||||||| |||||||| || || ||||| |    
T  53250 cccttatctcttcgctcactcatcaccttataatgagccttggtgtcttcctcatatatcctgcagctactcaccaaatccgagaagattctaatctttt 53151  T
Q  217 gatacccaatggctctcttgatgtc 241  Q
    |||||||||||||||||||||||||    
T  53150 gatacccaatggctctcttgatgtc 53126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 7964 - 8131
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||||||| || |  ||||||| | |||||||||||||||||||||| || |    ||||||||| || ||   ||| ||| | ||||||    
T  7964 cctctcatcattcaatctctgctctcctttgtcaacaggagcactgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaacctta 8063  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatctt 214  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| || || || |||||||||||    
T  8064 taatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaatatcctgatctt 8131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 164210 - 164107
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || | ||||||||| || || ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  164210 ctcatcaccttgtaatgagctttcgtgttctcctcatatatcctgcagctactcaccaactcggagaaaattctgatcttctgatacccaatggctctct 164111  T
Q  235 tgat 238  Q
    ||||    
T  164110 tgat 164107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 3860 - 3754
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || ||||||||||| ||||| |||||||| ||||| || |||||  ||||||||||||||||||||||||||||||    
T  3860 ctcatcaccttgtaatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcctgatcttctgatacccaatggctctct 3761  T
Q  235 tgatgtc 241  Q
    |||||||    
T  3760 tgatgtc 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 15567 - 15673
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || ||||||||||| ||||| |||||||| ||||| || |||||| | ||||||||||||||||||||||||||||    
T  15567 ctcatcaccttgtaatgagctttcgtttcctcctcatagattctgcagctacttaccaattcagagaaatttctgatcttctgatacccaatggctctct 15666  T
Q  235 tgatgtc 241  Q
    |||||||    
T  15667 tgatgtc 15673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 12203681 - 12203499
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| || || |    ||| ||  | || || ||||| ||||| ||||||    
T  12203681 cctctcatcattcaatctttgtttccctttgtcagcaggagcactgtagggcttaggacgaccttgctggcctctgttcctcttctcactcataacctta 12203582  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||||| | || |||||||||||||| ||||||||||||||||| ||||| || ||     ||||||||||||| ||||||||    
T  12203581 taatgaactttggtatcctcctcatagattctacagctactcactaactcagaaaattgtttgatcttctgataaccaatggc 12203499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 238
Target Start/End: Complemental strand, 16947352 - 16947162
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttat 147  Q
    ||||||||||||| ||| || || || |||| |||||| |||||||| || || || || ||   ||| ||||||   ||| |||| ||||||||||| |    
T  16947352 ctctcatcattcattctctgctttcccttgtcagcaggggcactgtatggtttaggacgactctgctgtcccttaccccttctctcactcatcaccttgt 16947253  T
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||||| || |||||||| ||||| ||||| |||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||    
T  16947252 aatgagctttcgtatcctcttcatagattctgcagctactcaccaattcagagaaaattctaatcttctgatacccaatggctcttttgat 16947162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 13676903 - 13677007
Alignment:
Q  137 catcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttg 236  Q
    ||||||||| |||||||| || ||||| || ||||| || || |||||||||||||| || |||||||| || |||||||||||||||||||||||||||    
T  13676903 catcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaaatcagagaaaattcttatcttctgatacccaatggctctcttg 13677002  T
Q  237 atgtc 241  Q
    |||||    
T  13677003 atgtc 13677007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 13004921 - 13005024
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| ||||||||||||| ||| || ||||| ||||| |||||||| | |||||| || | |||||||||||||||||| |||||||| ||||    
T  13004921 ctcatcaccttgtaatgagcctttgaatcttcttcatagattctgcagctacttatcaactcagaaagaatcctgatcttctgataaccaatggccctct 13005020  T
Q  235 tgat 238  Q
    ||||    
T  13005021 tgat 13005024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 14261151 - 14260936
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | |||||||||||||  |||||||||||||| ||| |  || || |||| |||||| ||||| || |||||||| || ||   ||| ||||||    
T  14261151 aggagcatatctccccttaggcctcctctcatcattcagtctctacttacccttgtcagcaggggcactatacggcttcggacgactctactgtccctta 14261052  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacc 222  Q
      | |   ||| || |||||||| |||||||| || |||||||| ||||| || || ||||||||||||||||| |||||| |||| ||||| ||||| |    
T  14261051 cctttgcgctcactgatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctactcaccaactcagagaaattccttatcttttgatagc 14260952  T
Q  223 caatggctctcttgat 238  Q
    |||| || ||||||||    
T  14260951 caatagccctcttgat 14260936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 18050746 - 18050640
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || |||||||| || || ||||||| ||||||||| || |||||||| || |||| ||| || || ||||||||||    
T  18050746 ctcatcaccttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctct 18050647  T
Q  235 tgatgtc 241  Q
    |||||||    
T  18050646 tgatgtc 18050640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 12460079 - 12460187
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||||||||| |||||||| ||||| || |||||||| || || ||||| ||||||||||| |||||||  || |||||||||||||| || ||    
T  12460079 tctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaactctaatcttctgataccctatagc 12460178  T
Q  230 tctcttgat 238  Q
     ||||||||    
T  12460179 cctcttgat 12460187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 11385222 - 11385119
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||| ||| |||||||| |||| ||| |||||||| ||||| ||||| || |||||||| || ||| | |||||||||||||| |||||||| ||||    
T  11385222 ctcatcatcttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttctgatcttctgatagccaatggccctct 11385123  T
Q  235 tgat 238  Q
    ||||    
T  11385122 tgat 11385119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 238
Target Start/End: Complemental strand, 12798385 - 12798194
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||||||| || || || |||| |||||||||||| || |||||||| || ||   ||| |||||   |||   ||| |||||||||||     
T  12798385 cctctcatcattcaatctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctgcgctcactcatcaccttg 12798286  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||| |||| || |||||||| |||||||| |||||||| || |||||||| || ||  | || ||||||||||| ||||| || ||||||||    
T  12798285 taaagagctttcgtatcctcttcataaatcctacagctgcttaccaactcagaaaagtttcttatcttctgataaccaatagccctcttgat 12798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 241
Target Start/End: Complemental strand, 14283255 - 14283061
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||| | ||| || || || || | |||||| ||||| || ||||||||||| ||   ||| |||||||| ||| |||| |||||||||||     
T  14283255 cctctcatcattgagtctctgcttacccttatcagcaggggcactatacggcttcgggcgactctgctgtcccttattccttctctcactcatcaccttg 14283156  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| || || ||||||||||| || || || | ||| ||||| || |||||||| || ||||  || ||||| ||| |||||||||||||    
T  14283155 taatgagctttagtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattctaatctgttgctaccctatgactctcttgatgtc 14283061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 13024795 - 13024903
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||||||||| |||||||| || || || |||||||| || || ||||| || |||||||| |||||||  || ||||||||||||||||| ||    
T  13024795 tctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaactctaatcttctgatacccaatagc 13024894  T
Q  230 tctcttgat 238  Q
    ||| |||||    
T  13024895 tcttttgat 13024903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 12712456 - 12712353
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||  |||||||||||| ||| |||||||| ||||| |||||||| | ||||||  | | | | || ||||||||||| |||||||| ||||    
T  12712456 ctcatcaccttggaatgagcctttgaatcttcctcatagattctgcagctacttatcaactcataaagagttctaatcttctgatagccaatggccctct 12712357  T
Q  235 tgat 238  Q
    ||||    
T  12712356 tgat 12712353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 14145029 - 14145223
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||| | ||| || || || |||| |||||| |||||||| ||||| || || ||   ||| ||||||  ||||  ||| ||||||||||||    
T  14145029 cctctcatcattaagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacctcttcgctcactcatcacctta 14145128  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| || ||  |||||||||| || || || | ||||||||| || | |||||| || ||||  || || || |||||||||||||||||    
T  14145129 taatgagctttggtgccctcctcatagatcctgcaacgactcaccaaatcagggaaaattctaatctgttggtatcctatggctctcttgatgtc 14145223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 13676790 - 13676863
Alignment:
Q  18 tcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcact 91  Q
    ||||||||||| | ||||| ||| |||  ||||||||||||||| || ||||| ||||||| ||||||||||||    
T  13676790 tcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcact 13676863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 26115388 - 26115277
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | ||| |||||||| || || || || ||||| |||||||| ||  | |||||||| ||||| |  ||||||| |||||| ||||||||    
T  26115388 tctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaactcagagaagactctgatctgctgatatccaatggc 26115289  T
Q  230 tctcttgatgtc 241  Q
    ||||||||||||    
T  26115288 tctcttgatgtc 26115277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 15810715 - 15810765
Alignment:
Q  188 caccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||||||| |||||||| || ||||||||||||||||| ||||| |||||    
T  15810715 caccaactcagagaaaattctaatcttctgatacccaatagctcttttgat 15810765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 19150467 - 19150525
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||||||||| |||||||| || |||||||| ||||| || || ||||||||||||||    
T  19150467 ctcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctactcaccaa 19150525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 20749866 - 20749924
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||||||||| |||||||| || |||||||| ||||| || || ||||||||||||||    
T  20749866 ctcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctactcaccaa 20749924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 21755901 - 21755974
Alignment:
Q  168 tcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||||||||| ||  | |||||||| ||||| |  ||||||| |||||||||||| ||||| ||||||||    
T  21755901 tcataaattctacacctgttaaccaactcagagaagactctgatctgctgatacccaatagctcttttgatgtc 21755974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 9581 - 9477
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| ||| ||||||| ||||||||||||||  | || ||||||||||||||||| ||||| || || |||||||||||||||||||||||||    
T  9581 ctcatcaccttgtaaagagccttagtatcctcctcata--tcctgcagctactcaccaactcagagaagattcttatcttctgatacccaatggctctct 9484  T
Q  235 tgatgtc 241  Q
    |||||||    
T  9483 tgatgtc 9477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 23746 - 23714
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaat 175  Q
    ||||||||||||||| |||||||||||||||||    
T  23746 cttataatgagccttggtatcctcctcataaat 23714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 5548 - 5654
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || ||||| || ||||| || || ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||    
T  5548 ctcatcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaactcagagaaaattcttatcttctgatacccaatggttctct 5647  T
Q  235 tgatgtc 241  Q
    |||||||    
T  5648 tgatgtc 5654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 153899 - 154093
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||| ||  || || || |||| |||||||||||| || |||||||| || ||   ||| ||||||  |||||  || | |||||||||     
T  153899 cctctcatcattcagtcgctgcttacccttgtcagcaggagcactatatggcttcggacgactctgctgtcccttacctctttgttcacccatcaccttg 153998  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| || || |||||||||||||| |||||||| || |||||||| |||||  | || ||||||||||| ||||||||||||||||||||    
T  153999 taatgagctttcgtctcctcctcataaatcctacagctgcttaccaactcagagaagtttctaatcttctgataaccaatggctctcttgatgtc 154093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 23430 - 23377
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    |||||||||||||||||||||||| || || | ||||||||||||||| |||||    
T  23430 cctctcatcattcaatctttgttttcccttatcagcaggagcactgtaaggctt 23377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 21901546 - 21901692
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||  | |     || || || || || ||||| ||||| ||||||    
T  21901546 cctctcatcattcaatctctgtttccctttgtcagcaggagcactgtagggcttcggatgaccttgatggcctttgttcctcttctcactcataacctta 21901645  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    |||||||  || |||||||||||||||||||||||||| ||||||||    
T  21901646 taatgagatttcgtatcctcctcataaattctacagctgctcaccaa 21901692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 19716363 - 19716260
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || || |||||||| || || ||||| || |||||||| |||||| | || ||||||||||| |||||||||||||    
T  19716363 ctcatcaccttataatgagctttagtgtcttcctcatatatcctgcagctgcttaccaactcagagaaatttctaatcttctgatagccaatggctctct 19716264  T
Q  235 tgat 238  Q
    ||||    
T  19716263 tgat 19716260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 19720926 - 19720823
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || || |||||||| || || ||||| || |||||||| |||||| | || ||||||||||| |||||||||||||    
T  19720926 ctcatcaccttataatgagctttagtgtcttcctcatatatcctgcagctgcttaccaactcagagaaatttctaatcttctgatagccaatggctctct 19720827  T
Q  235 tgat 238  Q
    ||||    
T  19720826 tgat 19720823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 23097364 - 23097261
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| |||| ||| ||||| || ||||| |||||||| || ||||| || ||| | |||||||||||||| |||| ||| ||||    
T  23097364 ctcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctacttacaaactcagaaaaagttctgatcttctgatagccaaaggccctct 23097265  T
Q  235 tgat 238  Q
    ||||    
T  23097264 tgat 23097261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 23028796 - 23028739
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||||||||| ||||||||||||||||||||||| ||  |||||||||| |||||||    
T  23028796 taatgagccttggtatcctcctcataaattctacaactgttcaccaactcggagaaaa 23028739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 23274690 - 23274793
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| ||||||||||| |||||||| ||||| || |||||||| || |||||||| || ||  | || || |||||||| ||||| || ||||    
T  23274690 ctcatcaccttgtaatgagccttcgtatcctcttcatagatcctacagctgcttaccaactcagaaaagtttcttattttctgataaccaatagccctct 23274789  T
Q  235 tgat 238  Q
    ||||    
T  23274790 tgat 23274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 12577450 - 12577556
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||| ||||||||||| || || |||||||| || || ||||||| ||||||||| || || ||||| || ||||  || || || ||||||||||    
T  12577450 ctcatcactttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagaaaaaattctaatctgttggtatcctatggctctct 12577549  T
Q  235 tgatgtc 241  Q
    |||||||    
T  12577550 tgatgtc 12577556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 21320337 - 21320280
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||||||||| ||||| |||||||||||||| |||||| |||||| ||| |||||||    
T  21320337 taatgagccttggtatcatcctcataaattctgcagctattcaccagctcggagaaaa 21320280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 23029870 - 23029927
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||||||||| || |||||||||||||| || || |||||||||||||| |||||||    
T  23029870 taatgagccttagtgtcctcctcataaatcctgcaactactcaccaactcggagaaaa 23029927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 24704822 - 24704770
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||| | |||||||||||||| |||||||||||| |||||||    
T  24704822 accttgtaatgagccctggtatcctcctcatagattctacagctattcaccaa 24704770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 28350884 - 28350940
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    ||||||||||||||||||||| |  ||||||| | |||||||||| |||||||||||    
T  28350884 cctctcatcattcaatctttgctcccctttgtcaacaggagcactatagggcttcgg 28350940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 20321089 - 20321180
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||||||||| ||||||||||| ||||| || || || ||||||| ||| |||||||  | ||||||||| || ||||| || ||||||||    
T  20321089 taatgagccttagtatcctcctcgtaaatcctgcaactgctcaccagctcggagaaaactcggatcttctggtaaccaattgccctcttgat 20321180  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 22742306 - 22742209
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||| ||||||||||| |||||||| || ||||| || || || ||||||| ||| |||||||  | ||||||||| || ||||| || ||||||||    
T  22742306 accttgtaatgagccttggtatcctcttcgtaaatcctgcaactgctcaccagctcggagaaaactcggatcttctggtaaccaattgccctcttgat 22742209  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 24817274 - 24817221
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    |||||||||||||||||||||||| || || | |||||||||||| || |||||    
T  24817274 cctctcatcattcaatctttgtttacccttatcagcaggagcactataaggctt 24817221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 22733108 - 22733020
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    ||||||||||| ||||||||||| ||||| || || || ||||||| ||| |||||||  | |||||| || || ||||| ||||||||    
T  22733108 taatgagccttggtatcctcctcgtaaatcctgcaactgctcaccagctcagagaaaactcggatcttttggtaaccaattgctctctt 22733020  T

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Target: scaffold0317 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 3122 - 3226
Alignment:
Q  137 catcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttg 236  Q
    ||||||||| |||||||| || ||||| || ||||| || || |||||||||||||| || |||||||| || |||||||||||||||||||||||||||    
T  3122 catcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaaatcagagaaaattcttatcttctgatacccaatggctctcttg 3221  T
Q  237 atgtc 241  Q
    |||||    
T  3222 atgtc 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 3009 - 3082
Alignment:
Q  18 tcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcact 91  Q
    ||||||||||| | ||||| ||| |||  ||||||||||||||| || ||||| ||||||| ||||||||||||    
T  3009 tcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcact 3082  T

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Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 319741 - 319844
Alignment:
Q  138 atcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttga 237  Q
    |||||||| |||||||| || || ||||||||||||||||| |||||||| ||||| || |||||  || | ||||||||||||||||||||||||||||    
T  319741 atcaccttgtaatgagctttcgtgtcctcctcataaattctgcagctacttaccaattcagagaagttctttatcttctgatacccaatggctctcttga 319840  T
Q  238 tgtc 241  Q
    ||||    
T  319841 tgtc 319844  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 200374 - 200318
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    ||||||||||||||||||||  || ||||||| |||| ||||| ||| |||||||||    
T  200374 cctctcatcattcaatctttacttccctttgtcagcaagagcaatgtcgggcttcgg 200318  T

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Target: scaffold0706 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 5018 - 4912
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || || |||||||| ||  | |||||||||||||| || |||||||| || |||||||||||||||||||||||||    
T  5018 ctcatcaccttgtaatgagctttagtgtcttcctcatatatcatgcagctactcaccaattcagagaaaattctaatcttctgatacccaatggctctct 4919  T
Q  235 tgatgtc 241  Q
    |||||||    
T  4918 tgatgtc 4912  T

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Target: scaffold0367 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 8830 - 8724
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||| ||||| | |||||| || ||||| |||||||| || || ||||||||||||||||| |||||||| || | |||||||||||||||||||||||    
T  8830 ctcataaccttgtcatgagctttagtatcttcctcatatatcctgcagctactcaccaactcagagaaaattctaaccttctgatacccaatggctctct 8731  T
Q  235 tgatgtc 241  Q
    |||||||    
T  8730 tgatgtc 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 54542 - 54648
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| ||  | ||||||||||| ||||| |||||||| ||||| || |||||  | |||||||||||||||||||||||||| |    
T  54542 ctcatcaccttataatgagctttcatgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttctgatacccaatggctcttt 54641  T
Q  235 tgatgtc 241  Q
    |||||||    
T  54642 tgatgtc 54648  T

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Target: scaffold1517 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 238
Target Start/End: Complemental strand, 1409 - 1193
Alignment:
Q  22 caggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctt 121  Q
    ||||||| | ||||| ||| |||  ||| |||||||||| | | ||||| || |||| ||||||||||||||| ||||| || || ||   ||| |||||    
T  1409 caggagcatctctcctcttgggcctcctatcatcattcattttctgttttcccttgtcagcaggagcactgtaaggcttaggacgactctgctgtccctt 1310  T
Q  122 atttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatac 221  Q
    |  |||  |||| ||||||||||| |||||||| ||||| || |||||||| || |||||||| || |||||||| ||||| |  |||||||||||||||    
T  1309 acctctcctctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctacagctgcttaccaactcagagaagactctgatcttctgatac 1210  T
Q  222 ccaatggctctcttgat 238  Q
    || || ||||| |||||    
T  1209 cctatagctcttttgat 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 33298 - 33078
Alignment:
Q  18 tcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgac 117  Q
    ||||||||||| | ||||| ||| |||  ||||||||||||||  || ||||| ||||||| ||||||||||||||| || || || || ||   ||| |    
T  33298 tcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactgtatggtttaggacgactctgctgtc 33199  T
Q  118 ccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctg 217  Q
    |||||   |||  ||| ||||||||||| |||||||| || || || |||||||| || || ||||| || |||||||| |||||||| || ||||| ||    
T  33198 ccttaccccttcgctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaattctaatcttttg 33099  T
Q  218 atacccaatggctctcttgat 238  Q
    ||||||||| ||||| |||||    
T  33098 atacccaatagctcttttgat 33078  T

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Target: scaffold0405 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 238
Target Start/End: Original strand, 6009 - 6200
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||   | ||||| ||||||| |||||||||||| || || ||||| || ||   ||||||||||  |||   ||| |||||||| |||    
T  6009 cctctcatcattcagcatctgttttcctttgtcagcaggagcactatacggtttcggacgactctgctgacccttacctctgcgctcactcatcacttta 6108  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||||||| || |||||||| ||||| |||||| |||| || ||||| ||||||||| |||| ||||| ||||| |||||||| | ||||||    
T  6109 taatgagctttcgtatcctcttcatatattctaaagctgcttaccaaatccgagaaattccttatcttttgataaccaatggcccgcttgat 6200  T

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Target: scaffold0222 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 296 - 193
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || |||||||| || || ||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||||    
T  296 ctcatcaccttataatgagctttggtgtcctcctcgtagatcctacaactactcaccaaatcagagaagattcttatcttctgatagccaatggctctct 197  T
Q  235 tgat 238  Q
    ||||    
T  196 tgat 193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 21309 - 21402
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatgg 228  Q
    ||||||||||| |||||||| ||  |||| |||||||| ||||| ||||||||||||||||| |||||| | || ||||||||||| |||||||    
T  21309 ctcatcaccttgtaatgagctttcctatcttcctcatatattctgcagctactcaccaactcggagaaatttcttatcttctgatagccaatgg 21402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 1081 - 987
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| || |||||| |||| ||||| || || ||||||||    
T  1081 ctcatcaccttataatgagcttttgtgtcctcctcatatattctgcagctactcaccaaatcagagaaattccttatcttttggtaaccaatggc 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 844 - 750
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| || ||  | || ||||||||||| ||||||||    
T  844 ctcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatggc 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 28094 - 28000
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| || |||||| |||| ||||| || || ||||||||    
T  28094 ctcatcaccttataatgagcttttgtgtcctcctcatatattctgcagctactcaccaaatcagagaaattccttatcttttggtaaccaatggc 28000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 25955 - 26049
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| || ||  | || ||||||||||| ||||||||    
T  25955 ctcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatggc 26049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 98392 - 98286
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||| ||||| ||||||||||| |||||||| ||||  || |||||||| || |||||||| || ||  | ||||||||||||||||||||||||||||    
T  98392 ctcattaccttgtaatgagccttcgtatcctcttcattgatcctacagctgcttaccaactcagaaaagtttctgatcttctgatacccaatggctctct 98293  T
Q  235 tgatgtc 241  Q
    |||||||    
T  98292 tgatgtc 98286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 176394 - 176540
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||| ||| |||||  ||||||| ||||||||||| || || ||||| || ||   ||| ||||||  |||   ||| ||||||||||||    
T  176394 cctctcatcattcagtctctgtttaactttgttggcaggagcactatacggtttcggacgactctgctgtcccttacctctacgctcactcatcacctta 176493  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    |||||||| ||||||||||| ||||| || |||||||||||||||||    
T  176494 taatgagcttttgtatcctcttcatagatcctacagctactcaccaa 176540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 29905 - 30090
Alignment:
Q  18 tcaacaggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgac 117  Q
    |||| |||||| | ||||| | |||||  |||||||||||||| ||| || || ||||||| ||||||||||||  | || ||||| || ||   ||| |    
T  29905 tcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacctttgtcagcaggagcactagacggtttcggacgactctgctgtc 30004  T
Q  118 ccttatttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaa 203  Q
    ||||   |||   ||| |||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| || ||||||    
T  30005 ccttgcctctacgctcactcatcaccttataatgagcctttgtatcctcttcatagattctacaactactcaccaaatcagagaaa 30090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 4225 - 4022
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | ||||| |||||||  ||||||||||||||| || ||||| ||||||| |||||||||||| || || ||||| || ||   ||| ||||||    
T  4225 aggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacctttgtcagcaggagcactatacggtttcggacgactctactgtccctta 4126  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacc 222  Q
      |||   ||| |||||||| ||||||||||| ||||||||||| ||||| || ||||| ||||| ||||| || || ||  |||| ||||| ||||| |    
T  4125 cctctgcgctcactcatcactttataatgagcttttgtatcctcttcatagatcctacaactacttaccaattcagaaaagttccttatcttttgataac 4026  T
Q  223 caat 226  Q
    ||||    
T  4025 caat 4022  T

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Target: scaffold0046 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 70491 - 70706
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgaccctta 122  Q
    |||||| | ||||| |||||||  ||||||||||||||  || ||||| ||||||| |||||||||||| || || ||||| || ||    || ||||||    
T  70491 aggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgactctgttgtccctta 70590  T
Q  123 tttcttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacc 222  Q
      |||   ||| |||||||| ||||||||||| || |||||||| ||||| ||||||||||| || ||||| || || ||| | || ||||||||||| |    
T  70591 cctctgcgctcactcatcactttataatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaatttcttatcttctgataac 70690  T
Q  223 caatggctctcttgat 238  Q
    |||| || ||||||||    
T  70691 caatagccctcttgat 70706  T

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Target: scaffold0026 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 52058 - 52237
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||  || ||||| ||||||| |||||||||||| ||  | ||||| |||||   ||| ||||||  |||   ||| |||||||| |||    
T  52058 cctctcatcattcagcctctgtttacctttgtcagcaggagcactatacagtttcggacggctctgctgtcccttacctctgcgctcactcatcacttta 52157  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaat 226  Q
    |||||||||||||||||||| |||||||| |||||||| || ||||| || || | | |||| ||||| ||||| |||||    
T  52158 taatgagcctttgtatcctcttcataaatcctacagctgcttaccaattcagaaatattccttatcttttgataaccaat 52237  T

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Target: scaffold1299 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 1657 - 1555
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| |||| ||| |||||||| ||||| ||||| || |||||||| || ||| | |||||||||||||| |||||||| ||||    
T  1657 ctcatcaccttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttctgatcttctgatagccaatggccctct 1558  T
Q  235 tga 237  Q
    |||    
T  1557 tga 1555  T

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Target: scaffold0348 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 241
Target Start/End: Complemental strand, 17381 - 17187
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||| ||||||||| || |||| |||||| |||||||| || || || || ||   ||| ||||||  ||||  ||| ||||||||||||    
T  17381 cctctcatcattcagtctttgttttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttacctcttcgctcactcatcacctta 17282  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| ||||| ||||||||||| || || || | | | ||||| || ||||| || || ||||  || ||||| |||||||||||||||||    
T  17281 taatgagcttttgtgtcctcctcatagatcctgcaacgatttaccaaatcagagaagattctaatctgttgctaccctatggctctcttgatgtc 17187  T

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Target: scaffold0235 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 8271 - 8165
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||  | ||||||||||| ||||| |||| ||| ||||| || |||||  |  |||||||||||||||||||||||||||    
T  8271 ctcatcaccttgtaatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagtttttgatcttctgatacccaatggctctct 8172  T
Q  235 tgatgtc 241  Q
    |||||||    
T  8171 tgatgtc 8165  T

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Target: scaffold0235; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 18485 - 18379
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||  | ||||||||||| ||||| |||| ||| ||||| || |||||  |  |||||||||||||||||||||||||||    
T  18485 ctcatcaccttgtaatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagtttttgatcttctgatacccaatggctctct 18386  T
Q  235 tgatgtc 241  Q
    |||||||    
T  18385 tgatgtc 18379  T

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Target: scaffold0067 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 48989 - 48883
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| ||||  ||||||||||| || || || | ||| ||||| || |||||||| || |||| ||||||||| ||||||||||    
T  48989 ctcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaattctaatctgctgataccctatggctctct 48890  T
Q  235 tgatgtc 241  Q
    |||||||    
T  48889 tgatgtc 48883  T

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Target: scaffold0067; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 58023 - 57917
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| ||||  ||||||||||| || || || | ||| ||||| || |||||||| || |||| ||||||||| ||||||||||    
T  58023 ctcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaattctaatctgctgataccctatggctctct 57924  T
Q  235 tgatgtc 241  Q
    |||||||    
T  57923 tgatgtc 57917  T

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Target: scaffold0067; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 30119 - 30222
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || |||||||||||||| |||||||| || ||||| || |||||  | || || |||||||| |||||||||||||    
T  30119 ctcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagctgcttaccaaatcagagaagtttcttattttctgataaccaatggctctct 30218  T
Q  235 tgat 238  Q
    ||||    
T  30219 tgat 30222  T

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Target: scaffold0067; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 64411 - 64305
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| ||||  ||||||||||| || || || | ||| ||||| || |||||||| || ||||  |||||||| ||||||||||    
T  64411 ctcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaattctaatctgttgataccctatggctctct 64312  T
Q  235 tgatgtc 241  Q
    |||||||    
T  64311 tgatgtc 64305  T

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Target: scaffold0476 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 354 - 251
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| |||| ||| ||||| || ||||| ||||| || |||||||| || ||| | |||||||||||||| |||||||| ||||    
T  354 ctcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctgcttaccaactcagaaaaagttctgatcttctgatagccaatggccctct 255  T
Q  235 tgat 238  Q
    ||||    
T  254 tgat 251  T

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Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 238
Target Start/End: Original strand, 203788 - 203979
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||| ||| || || || |||| |||||| |||||||| ||||| || || ||   ||| ||||||  ||||  ||| ||||||||||||    
T  203788 cctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacctcttcgctcactcatcacctta 203887  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||||||| || || ||||||||||| || || || | ||| ||||| || |||||||| || ||||  || ||||| ||||||||||||||    
T  203888 taatgagctttggtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattctaatctgttggtaccctatggctctcttgat 203979  T

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Target: scaffold1032 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 624 - 518
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || ||||| |||||| |||| || |||||||| ||||| || |||||  | || || |||||||| |||||||||||||    
T  624 ctcatcaccttgtaatgagctttggtatcttcctcagaaatcctgcagctacttaccaaatcagagaagtttcttattttctgataaccaatggctctct 525  T
Q  235 tgatgtc 241  Q
    |||||||    
T  524 tgatgtc 518  T

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Target: scaffold0664 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 7533 - 7619
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatac 221  Q
    ||||||||||| |||||||| || || ||||||||||| ||||| |||||||| ||||| || |||||  |||||||||||||||||    
T  7533 ctcatcaccttgtaatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcctgatcttctgatac 7619  T

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Target: scaffold0664; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 1 - 58
Alignment:
Q  184 tactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||| ||||| || |||||  |||||||||||||||||||||||||||||||||||||    
T  1 tacttaccaattcagagaagttcctgatcttctgatacccaatggctctcttgatgtc 58  T

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Target: scaffold0585 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 772 - 615
Alignment:
Q  32 tctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttc 131  Q
    ||||| |||||||  |||||||||||||| ||| | ||| ||||||| ||||||||||||||| || ||||| || ||   ||| ||||||  |||   |    
T  772 tctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctctacac 673  T
Q  132 tcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcac 190  Q
    || |||||||||||||  ||||| ||||||||||| |||||||| |||||||| |||||    
T  672 tcactcatcaccttat-gtgagcttttgtatcctcttcataaatcctacagctgctcac 615  T

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Target: scaffold0518 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 2238 - 2432
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||| ||||| || ||||||| || ||| |||||||| || || || || ||   ||| ||||||  ||||  ||| ||||||||||||    
T  2238 cctctcatcattcaacctttgctttcctttgtcagtaggggcactgtacggtttaggacgactctgctgtcccttacctcttcgctcactcatcacctta 2337  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgtc 241  Q
    |||||||| ||||| ||||||||||| ||  | || | ||| || || || |||||||| || ||||  |||||||| ||||||||||| |||||    
T  2338 taatgagcttttgtgtcctcctcatagatcttgcaacgacttactaaatcagagaaaattctaatctgttgataccctatggctctcttcatgtc 2432  T

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Target: scaffold0420 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 9109 - 9215
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||| ||||||||  || || ||||||||||| ||| | |||||||| ||||| || |||||  |  |||||||||| ||||||||||||||||    
T  9109 ctcatcacctaataatgagatttcgtgtcctcctcatagattatgcagctacttaccaattcagagaagtttttgatcttctggtacccaatggctctct 9208  T
Q  235 tgatgtc 241  Q
    |||||||    
T  9209 tgatgtc 9215  T

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Target: scaffold0261 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 238
Target Start/End: Complemental strand, 12310 - 12120
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttat 147  Q
    ||||||||||||| ||| || || || |||| ||||||||||||||| |||||||| || |||  ||  |||||   |||    || ||||||||||| |    
T  12310 ctctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcactcatcaccttgt 12211  T
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||| | || ||||||||||||||||| |||||||| || ||||| || | |||  | || || |||||||| |||||||||||||||||    
T  12210 aatgatctttcgtatcctcctcataaatcctacagctgcttaccaaatcagtgaagtttcttattttctgataaccaatggctctcttgat 12120  T

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Target: scaffold0261; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 238
Target Start/End: Complemental strand, 20490 - 20300
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcaccttat 147  Q
    ||||||||||||| ||| || || || |||| ||||||||||||||| |||||||| || |||  ||  |||||   |||    || ||||||||||| |    
T  20490 ctctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcactcatcaccttgt 20391  T
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||| | || ||||||||||||||||| |||||||| || ||||| || | |||  | || || |||||||| |||||||||||||||||    
T  20390 aatgatctttcgtatcctcctcataaatcctacagctgcttaccaaatcagtgaagtttcttattttctgataaccaatggctctcttgat 20300  T

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Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 692 - 586
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||  | |||||||||||||| || |||||||| ||||| || |||||| | ||  | |||||||| |||||||||||||    
T  692 ctcatcaccttgtaatgagctttgttgtcctcctcataaatcctgcagctacttaccaaatcagagaaatttctttttttctgataaccaatggctctct 593  T
Q  235 tgatgtc 241  Q
    |||||||    
T  592 tgatgtc 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 6299 - 6405
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || || |||||||||||||| |||||||| ||  |||| ||  ||||  |||| || |||||||| |||||||||||||    
T  6299 ctcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagctgcttcccaattcaaagaagttccttattttctgatagccaatggctctct 6398  T
Q  235 tgatgtc 241  Q
    |||||||    
T  6399 tgatgtc 6405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 40909 - 40856
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    |||||||||||| || || || || ||||||||||| |||||||||||||||||    
T  40909 cttataatgagctttggtgtcatcgtcataaattctgcagctactcaccaactc 40856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 34832 - 34935
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||||| |||||||||||||| || |||||||| ||||| || |||||  | || || |||| ||| |||||||| ||||    
T  34832 ctcatcaccttgtaatgagcttttgtgtcctcctcataaatcctgcagctacttaccaaatcagagaagtttcttattttctaataaccaatggcactct 34931  T
Q  235 tgat 238  Q
    ||||    
T  34932 tgat 34935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 4262 - 4160
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||  || ||||||||||||||||| |||||||| || ||||| || |||||  | || || |||||||| |||||||||||||    
T  4262 ctcatcaccttgtaatgagt-ttcgtatcctcctcataaatcctacagctgcttaccaaatcagagaagtttcttattttctgataaccaatggctctct 4164  T
Q  235 tgat 238  Q
    ||||    
T  4163 tgat 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 3789 - 3659
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||||||||||||| || |||| |||||||||||| |||||||| || || |    ||| ||  | || || ||||| ||||| ||||||    
T  3789 cctctcatcattcaatctttgtttccccttgtcagcaggagcactatagggcttaggacgaccttgctggcctctgttcctcttctcactcataacctta 3690  T
Q  147 taatgagcctttgtatcctcctcataaattc 177  Q
    ||||| || || |||||||||||||| ||||    
T  3689 taatgtgctttggtatcctcctcatagattc 3659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 8730 - 8818
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    ||||||||||| |||||||||||||||||||| || |||||||||| ||| || || |  | ||||||||| || ||||| ||||||||    
T  8730 taatgagccttagtatcctcctcataaattctgcaactactcaccagctcagaaaagacacggatcttctggtaaccaattgctctctt 8818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 23100 - 23004
Alignment:
Q  142 ccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||| |||||||| || ||||| |||||||| ||| | ||||||||||||||||| || ||  | | |||||| |||||||||||||| ||||||||    
T  23100 ccttgtaatgagctttagtatcttcctcatagattttgcagctactcaccaactcagaaaagttacggatcttttgatacccaatggccctcttgat 23004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 9248 - 9195
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    |||||||||||||||||||||||| || || | |||||||||||| || |||||    
T  9248 cctctcatcattcaatctttgtttacccttatcagcaggagcactataaggctt 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 23194 - 23142
Alignment:
Q  48 ctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    ||||||||||||||||| ||||| || || | ||||||||||||||| |||||    
T  23194 ctctcatcattcaatctctgtttacccttatcagcaggagcactgtaaggctt 23142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 252109 - 252217
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||||||||| |||||||| || || || |||||||| || || ||||| || ||||| || |||||||| || ||||||||||||| ||| ||    
T  252109 tctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaattcagagaaaattctaatcttctgatacctaatagc 252208  T
Q  230 tctcttgat 238  Q
    ||| |||||    
T  252209 tcttttgat 252217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 229655 - 229611
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagcta 185  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  229655 accttgtaatgagccttggtatcctcctcataaattctgcagcta 229611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 2214 - 2305
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaat 226  Q
    |||||||| ||||||||||| ||||||||||| ||||| ||||||||||| || || || || || ||| | || ||||||||||| |||||    
T  2214 ctcatcactttataatgagcttttgtatcctcttcatagattctacagctgcttactaattcagaaaaatttcttatcttctgataaccaat 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 5932 - 6035
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||| ||| || |||||||| ||||| || || |||||||| ||||| || |||||| |||| ||||| ||||| ||||| || ||||    
T  5932 ctcatcaccttgtaataagctttcgtatcctcttcatatatcctgcagctacttaccaattcagagaaattccttatcttttgatagccaatagccctct 6031  T
Q  235 tgat 238  Q
    ||||    
T  6032 tgat 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 66333 - 66270
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||  |||| ||||| |||||||    
T  66333 accttgtaatgagccttggtatcttcctcataaattctacagctgttcacgaactcggagaaaa 66270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 63348 - 63245
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || |||||||| |||||||| ||||||||||| ||||| || || ||  | || ||||||| ||| ||||| || ||||    
T  63348 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacagctacttaccaattcagaaaagtttcttatcttctcataaccaatagccctct 63249  T
Q  235 tgat 238  Q
    ||||    
T  63248 tgat 63245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 238
Target Start/End: Original strand, 263633 - 263824
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    |||||||||||||| ||| || || || |||| |||||| |||||||| |||||  | || ||   ||| ||||||  ||||  ||| ||||||||||||    
T  263633 cctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaagacgactctgctgtcccttacctcttcgctcactcatcacctta 263732  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||||| | || || ||||||||||| || || || | ||| ||||| || |||||||| || ||||  || ||||| ||||||||||||||    
T  263733 taatgaactttggtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattctaatctgttggtaccctatggctctcttgat 263824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 681 - 575
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||  || || |||||||||||||| ||||||||  | ||||| |  |||||  |||| ||  ||||||| |||||||||||||    
T  681 ctcatcaccttgtaatgagatttcgtgtcctcctcataaatcctacagctggttaccaatttagagaagttccttattctctgatagccaatggctctct 582  T
Q  235 tgatgtc 241  Q
    |||||||    
T  581 tgatgtc 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 351 - 245
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||  | |||||||||||||| || || || || ||||| || |||||  |  | ||||||||||| |||||||||||||    
T  351 ctcatcaccttgtaatgagctttcctgtcctcctcataaatcctgcaactgcttaccaaatcagagaagtttttaatcttctgataaccaatggctctct 252  T
Q  235 tgatgtc 241  Q
    |||||||    
T  251 tgatgtc 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 15911 - 15996
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaat 226  Q
    ||||| ||||||||||| |||||||||||||| ||||| || || ||||||||||| || ||| | | ||||||||| || |||||    
T  15911 accttgtaatgagccttagtatcctcctcatagattctgcaactgctcaccaactcagaaaaattacggatcttctggtaaccaat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 15816 - 15870
Alignment:
Q  46 gcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    ||||||||||||| | |||||||||||| || | ||||||||||||||| |||||    
T  15816 gcctctcatcattaactctttgtttgcccttatcagcaggagcactgtaaggctt 15870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 36617 - 36560
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||||||||| |||||||||||||||||||| || ||  |||||||||| |||||||    
T  36617 taatgagccttggtatcctcctcataaattctgcaactgttcaccaactcggagaaaa 36560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 496427 - 496480
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    ||||||||||||||||||||||||||| || | | ||||||||||||| |||||    
T  496427 cctctcatcattcaatctttgtttgcccttatcaacaggagcactgtaaggctt 496480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 442064 - 442117
Alignment:
Q  52 catcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggc 105  Q
    ||||||||||||||||||| || || | ||||||||||||||| ||||| ||||    
T  442064 catcattcaatctttgtttacccttatcagcaggagcactgtaaggcttagggc 442117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 167969 - 167933
Alignment:
Q  159 gtatcctcctcataaattctacagctactcaccaact 195  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  167969 gtatcatcctcataaatcctacagctactcaccaact 167933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 4811 - 4763
Alignment:
Q  144 ttataatgagcctttgtatcctcctcataaattctacagctactcacca 192  Q
    |||||||| || || ||||| ||||||||||||||||||||||||||||    
T  4811 ttataatgggctttggtatcatcctcataaattctacagctactcacca 4763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 67 - 167
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgatgt 240  Q
    |||||||| |||||  | |||||||| |||||||| |||| ||| || ||||| || || ||| | || ||||||||||| || ||||||||||||||||    
T  67 accttatagtgagctctcgtatcctcttcataaatcctactgctgcttaccaattcagaaaaatttctaatcttctgataacctatggctctcttgatgt 166  T
Q  241 c 241  Q
    |    
T  167 c 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 11771 - 11859
Alignment:
Q  148 aatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttg 236  Q
    |||||||||| |||||||||||||||||||| || || ||||||| ||| || || |  | ||||||||| || ||||| |||||||||    
T  11771 aatgagccttggtatcctcctcataaattctgcaactgctcaccagctcagaaaagacacggatcttctggtaaccaatcgctctcttg 11859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 14591 - 14682
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||||||||| |||||||||| ||| ||||| || || ||||||| ||| ||||| |  | ||||||||| || ||||| |||||||||||    
T  14591 taatgagccttagtatcctcctaatatattctgcaactgctcaccagctcagagaacacacagatcttctggtaaccaattgctctcttgat 14682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 48237 - 48325
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctctt 235  Q
    ||||||| ||| |||||||||||||||||||| || || ||||||||||| || || |  | ||||||||| || ||||| ||||||||    
T  48237 taatgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaagacacggatcttctggtaaccaattgctctctt 48325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 55268 - 55219
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    ||||||| ||| |||||||||||||||||||| || || |||||||||||    
T  55268 taatgagtcttggtatcctcctcataaattctgcaactgctcaccaactc 55219  T

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Target: scaffold1914 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 1035 - 936
Alignment:
Q  139 tcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    |||||||||||||||| || || ||||||||||| || || |||| ||||||||| |  |||||||| |||||||  || || || ||||| ||||||||    
T  1035 tcaccttataatgagctttggtgtcctcctcatagatcctgcagcgactcaccaaattagagaaaattctgatctgttggtatcctatggccctcttgat 936  T

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Target: scaffold1433 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 202
Target Start/End: Complemental strand, 1208 - 1053
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||  || ||||| || |||| ||||||||||||||| |||||||| || ||    || |||||   |||   ||| |||||||||||     
T  1208 cctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctctacgctcactcatcaccttg 1109  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaa 202  Q
    |||||||| || |||||||| ||||| || |||||||| || ||||| || |||||    
T  1108 taatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaa 1053  T

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Target: scaffold0621 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 520 - 615
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||||||||||||| |||||||||||||| || || || || ||||||| ||| || || |  | ||||||||| || ||||| |||||||||||    
T  520 cttataatgagccttggtatcctcctcatatatcctgcaactgctcaccagctcagaaaagacacggatcttctggtaaccaatcgctctcttgat 615  T

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Target: scaffold0621; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 4937 - 5032
Alignment:
Q  143 cttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||||||||||||| |||||||||||||| || || || || ||||||| ||| || || |  | ||||||||| || ||||| |||||||||||    
T  4937 cttataatgagccttggtatcctcctcatatatcctgcaactgctcaccagctcagaaaagacacggatcttctggtaaccaatcgctctcttgat 5032  T

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Target: scaffold0490 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 3360 - 3463
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || |||||||| ||||| || || ||| |||| ||||| || || ||  |||| ||||| ||||| ||||| || ||||    
T  3360 ctcatcaccttataatgagctttcgtatcctcttcatatatcctgcaggtacttaccaattcagaaaagttccttatcttttgataaccaatagccctct 3459  T
Q  235 tgat 238  Q
    ||||    
T  3460 tgat 3463  T

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Target: scaffold0423 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 1429 - 1350
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaat 226  Q
    ||||||| ||| ||||||||||||||||| || || || ||||||| ||| |||||||  ||||||||||| || |||||    
T  1429 taatgagtcttggtatcctcctcataaatcctgcaactgctcaccagctcggagaaaactctgatcttctggtaaccaat 1350  T

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Target: scaffold0404 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 202
Target Start/End: Original strand, 8151 - 8306
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgggcggctactctgacccttatttcttttctcgctcatcacctta 146  Q
    ||||||||||||||  || ||||| || |||| ||||||||||||||| |||||||| || ||    || |||||   |||   ||| |||||||||||     
T  8151 cctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctctacgctcactcatcaccttg 8250  T
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaa 202  Q
    |||||||| || |||||||| ||||| || |||||||| || ||||| || |||||    
T  8251 taatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaa 8306  T

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Target: scaffold0108 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 50600 - 50703
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| || ||||| || ||||| || |||||||| || |||||||| || ||  | || ||||||||||| ||||| || ||||    
T  50600 ctcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagtttcttatcttctgataaccaatagccctct 50699  T
Q  235 tgat 238  Q
    ||||    
T  50700 tgat 50703  T

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Target: scaffold0102 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 43193 - 43296
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    ||||||||||| |||||||| ||||||||||| ||||| ||  ||||||| || ||||| || |||||  | || || |||||||| ||||| || ||||    
T  43193 ctcatcaccttgtaatgagcttttgtatcctcatcatagatcttacagctgcttaccaaatcagagaagtttcttattttctgataaccaatagccctct 43292  T
Q  235 tgat 238  Q
    ||||    
T  43293 tgat 43296  T

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Target: scaffold0102; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 50142 - 50051
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||||||||| ||||||||||| ||||| || || || ||||||||||| |||||||  | |||||| || || ||||| || ||||||||    
T  50142 taatgagccttggtatcctcctcgtaaatcctgcaactgctcaccaactcggagaaaactcggatcttttggtaaccaattgccctcttgat 50051  T

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Target: scaffold0102; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 43081 - 43161
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggcttcgg 103  Q
    |||||| | ||||| |||||||  ||||||||||||||| || ||||| || |||| |||||| ||||| || ||||||||    
T  43081 aggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcgg 43161  T

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Target: scaffold0080 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 32380 - 32443
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaa 204  Q
    ||||| ||||||||||| |||||||||||||||||||| || ||  |||||||||  |||||||    
T  32380 accttgtaatgagccttggtatcctcctcataaattctgcaactgttcaccaacttggagaaaa 32443  T

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Target: scaffold0239 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 9596 - 9491
Alignment:
Q  135 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctct 234  Q
    |||||||||||||||||||| || || ||||||||||| || || || | ||| ||||| | ||||||||| || ||||  || ||| | ||||||||||    
T  9596 ctcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaaat-cgagaaaattctaatctgttggtacactatggctctct 9498  T
Q  235 tgatgtc 241  Q
    |||||||    
T  9497 tgatgtc 9491  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 17667 - 17705
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagcta 185  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  17667 taatgagccttggtatcctcctcataaattctgcagcta 17705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 25 - 78
Alignment:
Q  47 cctctcatcattcaatctttgtttgcctttgttagcaggagcactgtagggctt 100  Q
    ||||||||||||||||||||| || || || | ||||||||||||||| |||||    
T  25 cctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctt 78  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 621 - 670
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcaccaactc 196  Q
    ||||||||||| ||||| || |||||||||||||||||  ||||||||||    
T  621 taatgagccttggtatcttcgtcataaattctacagctgttcaccaactc 670  T

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Target: scaffold0505 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 2252 - 2349
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggctctcttgat 238  Q
    ||||| |||||||| || |||||||||||||| ||||| || ||||||||||| || || |||   | |||||||| ||| |||||| ||| ||||||    
T  2252 accttgtaatgagctttcgtatcctcctcatagattctgcaactactcaccaattcagaaaaatgacggatcttctaatatccaatgcctcgcttgat 2349  T

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Target: scaffold0357 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 17774 - 17729
Alignment:
Q  147 taatgagcctttgtatcctcctcataaattctacagctactcacca 192  Q
    ||||||| ||| |||||||||||||||||||| || ||||||||||    
T  17774 taatgagtcttagtatcctcctcataaattctgcaactactcacca 17729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 17729 - 17834
Alignment:
Q  130 tctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgagaaaatcctgatcttctgatacccaatggc 229  Q
    |||| ||||| | |||||||||||| || || || || ||||||||||| || ||  | |||||||| ||||| |  ||||||| |||||||||||| ||    
T  17729 tctcactcattatcttataatgagctttggtgtcttcttcataaattctgcaactgtttaccaactcagagaagactctgatctgctgatacccaatagc 17828  T
Q  230 tctctt 235  Q
    ||||||    
T  17829 tctctt 17834  T

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Target: scaffold1881 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 283 - 231
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||||    
T  283 accttgtaatgagccttggtatcctcttcatagattctacaactattcaccaa 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 895 - 843
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||| | |||||||| ||||| |||||||||||| |||||||    
T  895 accttgtaatgagccctggtatcctcatcatagattctacagctattcaccaa 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 5499 - 5551
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||||| |||||||| ||||| ||||| |||||| |||||||    
T  5499 accttgtaatgagccttagtatcctcatcatagattctgcagctattcaccaa 5551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 541 - 601
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaactccgaga 201  Q
    ||||| ||||||||||| || |||||||||||||| || || || ||||||||||| ||||    
T  541 accttgtaatgagccttagtgtcctcctcataaatcctgcaactgctcaccaactcagaga 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 11159 - 11107
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||||| |||||||||| ||| |||||||| ||| |||||||    
T  11159 accttgtaatgagccttggtatcctcctaatagattctacaactattcaccaa 11107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 14844 - 14792
Alignment:
Q  141 accttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 193  Q
    ||||| ||||||||||| |||||||||| ||| |||||||| ||| |||||||    
T  14844 accttgtaatgagccttggtatcctcctaatagattctacaactattcaccaa 14792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 43340 - 43272
Alignment:
Q  23 aggagcgtttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagcaggagcact 91  Q
    |||||| | ||||| |||||||  ||||||||||||||  || ||||| |||||||||| |||||||||    
T  43340 aggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgttagaaggagcact 43272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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