View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6960_low_6 (Length: 453)
Name: NF6960_low_6
Description: NF6960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6960_low_6 |
 | |
|
| [»] scaffold0667 (2 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 390; Significance: 0; HSPs: 36)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 18 - 438
Target Start/End: Complemental strand, 9328745 - 9328327
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9328745 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
9328646 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9328645 |
tttttactatggttaaatcgtgtttccatttacctttgaaatctttgaggcctttaggttatttgagtgatggaaaaaaggttttgttgagggtggattt |
9328546 |
T |
|
| Q |
218 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9328545 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatgatgttatgttttctgttggaagtcttgta |
9328446 |
T |
|
| Q |
318 |
ccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttcttttgattatatgagttttttgagtttt |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9328445 |
ccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttcttttgat--tatgagttttttgagtttt |
9328348 |
T |
|
| Q |
418 |
tgctatgtataagttgatgtc |
438 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
9328347 |
tgctatgtataagttgatgtc |
9328327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 18 - 438
Target Start/End: Complemental strand, 9321125 - 9320708
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
9321125 |
gttttgggagggtgtctttgcatgactt---attacgaaactacaaaagttgatgtttgggtgatgaaagaatatggttctagagatagttggtgtaaac |
9321029 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
|||||||||||| ||||||||||| | |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9321028 |
tttttactatggttaaatcgtgttacgatttacctttgaaatctttgaggcctttaggttattcgagtgatggaaaaaaggttttgttgagggtagatgc |
9320929 |
T |
|
| Q |
218 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
|||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
9320928 |
tgagaagctgttttggtatgatttgaagagtgcacaagttagttatgttgaaggaattcctgatttccatggagttatgttttgtgttggaagtcttgtc |
9320829 |
T |
|
| Q |
318 |
ccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttcttttgattatatgagttttttgagtttt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
9320828 |
ccaccttccttccctgttgataattctaagaagaaggagaatcgtacaagcaagagcatgagaaggtacttgttttgattatactagttttttgagtttt |
9320729 |
T |
|
| Q |
418 |
tgctatgtataagttgatgtc |
438 |
Q |
| |
|
|||||||||| |||||||||| |
|
|
| T |
9320728 |
tgctatgtattagttgatgtc |
9320708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 10353249 - 10352882
Alignment:
| Q |
24 |
ggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaacttttta |
123 |
Q |
| |
|
|||||||||||||| |||| | || ||||| || |||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
10353249 |
ggagggtgtctttgtatgattgtggattataaagatactaaaattgatgtttgggtgatgaaagaatatggatgtagagagagttggtgtaaacttttta |
10353150 |
T |
|
| Q |
124 |
ctatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattttgagaa |
223 |
Q |
| |
|
|| ||| |||||| | |||| ||||||||||| |||||||||| | | ||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
10353149 |
ctgtggttaaatcttctttcgatttacctttgcaatctttgaggcttttaggttattcgagtgatagaaaaaaggttttgttgagggtagatgttgagaa |
10353050 |
T |
|
| Q |
224 |
gctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtaccacct |
323 |
Q |
| |
|
|| |||| ||||||||| |||| |||||||||||||||| ||| ||||| | |||| || | |||| ||| |||||||||||||||||||||| |
|
|
| T |
10353049 |
tctattttggtatgatttggagagtaaacaagttagttatgttcaagaaattcttaatttggatgacactatgatttgtgttggaagtcttgtaccacct |
10352950 |
T |
|
| Q |
324 |
tccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt |
391 |
Q |
| |
|
| |||||||||||||||| ||||||| ||||||||| ||||||| ||||| ||| |||||||||||| |
|
|
| T |
10352949 |
tacttccctgttgataatcgtaggaagcaggagaatcctacaagcgagagcgagaaaaggtacttctt |
10352882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 18 - 411
Target Start/End: Original strand, 9284186 - 9284581
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
||||| ||||| |||||| | |||| | |||||||| |||||||| ||||||| ||||||||||||||| ||||||| | ||||||||||||||||||| |
|
|
| T |
9284186 |
gttttaggaggttgtcttagtatgattgtgaattatcaaactactaaaattgacgtttgggtgatgaaagaatatggttctagagatagttggtgtaaaa |
9284285 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
|||||||| ||| |||||| | ||| ||||| ||||||||||||||| ||| ||||||||| |||||||| | |||||| | || |||||| |
|
|
| T |
9284286 |
tttttactttggttaaatcacggttcactttacgtttgaaatctttgaggcctttaggttattctagtgatggtagtaaggttctattagaaatagattg |
9284385 |
T |
|
| Q |
218 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
| |||||||| ||| ||||||||| | ||||| ||||||| ||||||||||||||||||| |||| || | | |||| ||| ||||| ||||||||| |
|
|
| T |
9284386 |
taagaagctggtttggtatgatttgaagagtgagcaagttatttatgttgaaggaattcctaatttggatgaagctatgatttgtgttgaaagtcttgtg |
9284485 |
T |
|
| Q |
318 |
ccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt--ttgattatatgagttttttg |
411 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
9284486 |
ccaccttccttccctgttgataattctagtaagaaggagaatcgtttaagcaagagcaagagaaggtacttctttattgattatctgagttttttg |
9284581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 20 - 399
Target Start/End: Original strand, 12012544 - 12012927
Alignment:
| Q |
20 |
tttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactt |
119 |
Q |
| |
|
|||||||||||||||||| |||| | ||||| || |||||||| | |||||||| | |||||||||| ||||||| | || ||||||||||||||||||| |
|
|
| T |
12012544 |
tttgggagggtgtctttgtatgattgtgaatcatcaaactactaagattgatgtattggtgatgaaagaatatggttgtaaagatagttggtgtaaactt |
12012643 |
T |
|
| Q |
120 |
tttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgtt------gagggtag |
213 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||||||| || |||||||||| | ||||||| || |||||| |||| ||||||||| | |||| |
|
|
| T |
12012644 |
tttactttggtggaatcgtgtttcgttttacctttgatatttttgagacctttgggttattcgaatgatggtaaaatggttttgtttttgttggaggtaa |
12012743 |
T |
|
| Q |
214 |
attttgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtct |
313 |
Q |
| |
|
|| | |||||||| ||| ||||||||| | |||| ||||||||||||||||||||||||||| ||||| || | | |||| ||| |||||||||||| |
|
|
| T |
12012744 |
atcataagaagctggtttggtatgatttgaagagt---caagttagttatgttgaaggaattcctaatttcgatgaagctatgatttgtgttggaagtct |
12012840 |
T |
|
| Q |
314 |
tgtaccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt-ttgattat |
399 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12012841 |
tgtaccaccctccttccctgttgataattctaggaagaaggggaatcattcaagcaagagcaagagaaggtacttcttattgattat |
12012927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 18 - 399
Target Start/End: Original strand, 11987486 - 11987865
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| || | |||| | |||||| |||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
11987486 |
gttttgggagggtgtctttgtttgactgtgaatcatcatacta---agattgatatttgggtgatgaaagaatatggatgtagagatagttggtgtaaac |
11987582 |
T |
|
| Q |
118 |
tttttactatggata-aatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagatt |
216 |
Q |
| |
|
|||| || || ||| ||||||||||| ||||||||||||||||||||| ||| | ||||||| ||||||||| ||||||||||||||| | || |
|
|
| T |
11987583 |
ttttcac-attgatggaatcgtgtttcgttttacctttgaaatctttgagccctttgggttattcgagtgatggtaaaaaggttttgttggatcttaatc |
11987681 |
T |
|
| Q |
217 |
ttgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgt |
316 |
Q |
| |
|
|||||||| ||| ||||||||| | ||||| |||| ||||||||||||| ||||||||| | ||| || | | |||| ||| ||||||||||||||| |
|
|
| T |
11987682 |
acaagaagctggtttggtatgatttgaagagtgaacaatttagttatgttgacggaattcctaaattcgatgaagctatgatttgtgttggaagtcttgt |
11987781 |
T |
|
| Q |
317 |
accaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt-ttgattat |
399 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
11987782 |
accaccctccttccctgttgataattctaggaagaaggggaatcattcaagcaagaccaagagaaggtacttcttattgattat |
11987865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 20 - 399
Target Start/End: Original strand, 12006116 - 12006496
Alignment:
| Q |
20 |
tttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactt |
119 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||| |||||||| | |||||||| |||||||||||| ||||||| | || ||||||||||||||||||| |
|
|
| T |
12006116 |
tttgggagggtgtctttgtttgattgtgaattatcaaactactaagattgatgtatgggtgatgaaagaatatggttgtaaagatagttggtgtaaactt |
12006215 |
T |
|
| Q |
120 |
tttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattttg |
219 |
Q |
| |
|
|||||| || |||||||||| ||||||| ||| |||||||| ||| ||||||||| |||||||||||||| ||||||| |||| || | |
|
|
| T |
12006216 |
tttactttgatgggatcgtgtttcgttttacctgtgatatctttgatccctttaggttattcaagtgatggaaaaaaacttttgtttgaggtaaatcata |
12006315 |
T |
|
| Q |
220 |
agaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacc |
319 |
Q |
| |
|
|||||||| ||| ||||||||| | ||||| | |||||| ||| |||| |||||||| ||||| || | | ||| ||| ||||||||||||||||| |
|
|
| T |
12006316 |
agaagctggtttggtatgatttgaagagtgaagaagttaattacattgagggaattccaaatttcgatgaagcgatgatttgtgttggaagtcttgtact |
12006415 |
T |
|
| Q |
320 |
accttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt-ttgattat |
399 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12006416 |
gccttccttccctgttgagaattgtacgaagaaggagaatcgtacaagcaagagcaagagaaggtacttcttattgattat |
12006496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 388
Target Start/End: Complemental strand, 9316159 - 9315795
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| |||||||| ||| ||||||||||||||||||| | ||||||| ||| ||||||||||| |
|
|
| T |
9316159 |
gttttgggagggtgtctttgtatgattttgaattatcaaactactaaaactgatgtttgggtgatgaaagactatggatctag------ttggtgtaaac |
9316066 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
|||||||| ||| ||| || |||||| |||| ||||||| | ||||| ||| ||||||||| ||||| |||| |||||| | ||| |||||| |
|
|
| T |
9316065 |
tttttactttggttaattcatgtttcactttatctttgaattttttgaagcctttaggttattctagtgacggaagtaaggttctattggaaatagattg |
9315966 |
T |
|
| Q |
218 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
| |||||||||||| || ||| || | ||||| |||||||| |||||||||||||||| || |||| || | | |||| ||| ||||| |||||||||| |
|
|
| T |
9315965 |
taagaagctgttttggtgtgacttgatgagtgaacaagttatttatgttgaaggaatttctaatttggatgaagctatgatttgtgttgaaagtcttgta |
9315866 |
T |
|
| Q |
318 |
ccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtactt |
388 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
9315865 |
ccaccttccttccctgttgattattgtaggaagaaggagaatcatacaagcaagaacaagagaaggtactt |
9315795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 71 - 399
Target Start/End: Original strand, 12018937 - 12019266
Alignment:
| Q |
71 |
tgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttactatggataaatcgtgtttccatttacctttgaaatctttgagacct |
170 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||| ||||||||| | || |||||| ||| |
|
|
| T |
12018937 |
tgtttgggtgatgaaagaatatggatgtagagatagttggtgtaaactttttactttgatggaatcgtgtttcgttttaccttttagatttttgagccct |
12019036 |
T |
|
| Q |
171 |
gtaggttatttgagtgatggaaaaaaggttttgttgagggtagattttgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaag |
270 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||| || | | | |||| ||| ||||||||| | |||| ||||||||||||||||||| |
|
|
| T |
12019037 |
ttaggttattcgagtgatggaaaaaaggttttgttggatgtaaatcataatatgctggtttggtatgatttgaagagtcagcaagttagttatgttgaag |
12019136 |
T |
|
| Q |
271 |
gaattcctgatttccatcatgttatgttttctgttggaagtcttgtaccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaa |
370 |
Q |
| |
|
|||||||| ||||| || | | ||| ||| ||||||||||||||||||||||||||| |||| |||| || | | |||||||||||||||||| || |
|
|
| T |
12019137 |
gaattcctaatttcgatgaagccatgatttgtgttggaagtcttgtaccaccttccttacctgctgatgataatcatacgaaggagaatcgtacaagaaa |
12019236 |
T |
|
| Q |
371 |
gagcaagagaaggtacttctt-ttgattat |
399 |
Q |
| |
|
||||||||||||||||||||| |||||||| |
|
|
| T |
12019237 |
gagcaagagaaggtacttcttattgattat |
12019266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 371
Target Start/End: Complemental strand, 10335990 - 10335649
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||| || || |||||||| |||||||| ||||||||||||||||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
10335990 |
gttttgggagggtgtctttgtttgcctgtgaattatcaaactactaaaattgatgtttgggtgatgaaagaatatggctgtagagatagttggtgtaaac |
10335891 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
||||||| ||| |||||||||||| |||| |||||| ||| ||||||||| |||||||||| |||||| | ||| | |||| |
|
|
| T |
10335890 |
attttactttggttaaatcgtgtttagattt------------tttgaggcctttaggttattgtagtgatggaagtaaggttctattggaaatcgattg |
10335803 |
T |
|
| Q |
218 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
| ||||| |||||| ||||||||| | ||||| |||| ||||||||||||||||||||||| |||| || | |||| ||| ||||||||||||||| |
|
|
| T |
10335802 |
taagaagttgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatttggatgacactatgatttgtgttggaagtcttgtt |
10335703 |
T |
|
| Q |
318 |
ccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaag |
371 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
10335702 |
tcaccttccttacctgttgataatcgtaggaagaagcagaatcgtacaagcaag |
10335649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 9061358 - 9061573
Alignment:
| Q |
221 |
gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacca |
320 |
Q |
| |
|
||||||||||| ||||||| | | ||||| |||||||||||||||||||||||||||| |||| || | | |||||||| |||||||||||| ||| || |
|
|
| T |
9061358 |
gaagctgttttggtatgatctcaagagtgaacaagttagttatgttgaaggaattcctaattttgatgaagctatgttttatgttggaagtctcgtatca |
9061457 |
T |
|
| Q |
321 |
ccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttcttttgattatatgag---ttttttgagtttt |
417 |
Q |
| |
|
|||| |||||||||||||| || | ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
9061458 |
cctttcttccctgttgata---cttgtaagaaggagaatcgtacaagcaagaccaagagaaggtact--tattgattatatgagtttttttttgagtttt |
9061552 |
T |
|
| Q |
418 |
tgctatgtataagttgatgtc |
438 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
9061553 |
tgctatgtataagttgatgtc |
9061573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 9065589 - 9065777
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||||||||| | ||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
9065589 |
gttttgggagggtgtctttgtatgattttgaattatgaaactactaatattgatggttgggtgatgaaagaatatggatctagagatagttggtgtaaac |
9065688 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttg |
206 |
Q |
| |
|
|||||||| ||| ||||| |||||||||| || ||||| | ||| ||| ||| ||||||||| ||||||||| |||||| ||||| |
|
|
| T |
9065689 |
tttttactttggtcaaatcttgtttccattcacatttgacagcttcgaggcctctaggttattccggtgatggaagtaaggttctgttg |
9065777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 9061137 - 9061274
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||| | ||||||| |||||||||||||||||||| |
|
|
| T |
9061137 |
gttttgggtgggtgtctttgcatgtctgtgaattatgaagctactaaaattgatgtttgggtgatgaaagactatggatctagagatagttggtgtaaac |
9061236 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttg |
155 |
Q |
| |
|
|||||||| ||| ||||||||||||| ||| ||||||| |
|
|
| T |
9061237 |
tttttactttggttaaatcgtgtttcaattcacctttg |
9061274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 221 - 409
Target Start/End: Complemental strand, 9291865 - 9291676
Alignment:
| Q |
221 |
gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacca |
320 |
Q |
| |
|
||||||||||| ||||||||| | ||||| |||| ||||||||||||||||||||||| |||| || | | |||| ||| ||||| ||||||| ||||| |
|
|
| T |
9291865 |
gaagctgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatttggatgaagctatgatttgtgttgaaagtcttctacca |
9291766 |
T |
|
| Q |
321 |
ccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt-ttgattatatgagttttt |
409 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||| | |||||| |||| | |||||||||| |||||||| ||||||||| |
|
|
| T |
9291765 |
ccttccttccctgttgataattgtaggaagaaggagaatcatacgaacaagagaaagaaacggtacttcttattgattatctgagttttt |
9291676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 8573501 - 8573689
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||| ||||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
8573501 |
gttttgggtgggtgtctttgtatgtctgtgaattatgaaaccactgaaattgatgtttgggtgatgaaagaatatggttctagagatagttggtgtaaac |
8573600 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttg |
206 |
Q |
| |
|
|||||||| | | ||||||||||||| | || ||| ||||||| ||| ||| ||||||||| |||||||||| |||||| ||||| |
|
|
| T |
8573601 |
tttttactttcgttaaatcgtgtttcactccacattttaaatcttcgaggcctttaggttattctagtgatggaagtaaggttctgttg |
8573689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 9292083 - 9291964
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
||||| |||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
9292083 |
gttttaggagagtgtctttgtatgactgtgaattatgaaactactaaaattgatgtttgggtgatgaaacaatatggttctagagatagttggtgtaaac |
9291984 |
T |
|
| Q |
118 |
tttttactatggataaatcg |
137 |
Q |
| |
|
|||||||| ||| ||||||| |
|
|
| T |
9291983 |
tttttactttggttaaatcg |
9291964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 16269235 - 16269110
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
||||||||||| |||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |
|
|
| T |
16269235 |
gttttgggaggatgtctttgtataactgtgaattatgaaactactaaaattgatgtttgggtgatgaaagagtatggatatagagatagttggtgcaaac |
16269136 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttc |
143 |
Q |
| |
|
||||||| ||| ||||||||||||| |
|
|
| T |
16269135 |
tttttaccttggttaaatcgtgtttc |
16269110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 221 - 373
Target Start/End: Original strand, 8573725 - 8573877
Alignment:
| Q |
221 |
gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacca |
320 |
Q |
| |
|
||||||||||| ||||||||| | ||||| |||||| ||||||||||||||||||||| ||| || | |||||||| ||||||||||||||||||| |
|
|
| T |
8573725 |
gaagctgttttggtatgatttgaagagtgaacaagtcagttatgttgaaggaattcctaattggaatgcagctatgttttgtgttggaagtcttgtacca |
8573824 |
T |
|
| Q |
321 |
ccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagag |
373 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| |||||||| ||||||||||||| |
|
|
| T |
8573825 |
cctttcttccctgttgataattgtaggaaggaggagaattgtacaagcaagag |
8573877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 10347931 - 10347743
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||| || ||| | ||||| || |||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
10347931 |
gttttgggagggtgtctttgtatcactgtcgattataaagatactaaaattgatgtttgggtcatgaaagaatatggatgtagagatagttggtgtaaac |
10347832 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttg |
206 |
Q |
| |
|
|||||||||||| | | ||||||||| ||||||||||||||| ||||| || || |||||| |||||||||| |||||| ||||| |
|
|
| T |
10347831 |
tttttactatggctgagtcgtgtttcgatttacctttgaaattgttgaggcccatatgttattctagtgatggaagtaaggttctgttg |
10347743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 7115638 - 7115906
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
7115638 |
gttttgggagggtgtctttgtatgattgtgaattatagaactactaaaacagatgtttgggtgatgaaacaatatggatctagagacagctggtgtaaac |
7115737 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttg---aaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtaga |
214 |
Q |
| |
|
||||||| ||| ||| ||||||||| ||||| ||||| | || || || ||| ||||||||| |||||||||| |||||| | ||| |||| |
|
|
| T |
7115738 |
tttttacattggttaattcgtgtttcgatttatctttgattacatggttcaggcctttaggttattctagtgatggaagcaaggttctattggaaataga |
7115837 |
T |
|
| Q |
215 |
ttttgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgattt |
283 |
Q |
| |
|
|| | ||||||| ||| ||||||||| | ||| | ||||||||||| |||||||||||||||| |||| |
|
|
| T |
7115838 |
ttgtaggaagctggtttggtatgatttgaagagcgaacaagttagttgtgttgaaggaattcctaattt |
7115906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 350
Target Start/End: Complemental strand, 9364774 - 9364442
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||| | |||| | |||||||| |||||||| ||||||||||||||||||||||| ||||||||| | |||||||||||||||| |
|
|
| T |
9364774 |
gttttgggagggtgtcttagtatgattgtgaattatcaaactactcaaattgatgtttgggtgatgaaagaatatggattaaaagatagttggtgtaaat |
9364675 |
T |
|
| Q |
118 |
tttttactatgg-ataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagatt |
216 |
Q |
| |
|
| |||||| ||| | || | ||||| |||||||||||| ||||| ||| ||||||||| |||||||||||| |||||||| ||| ||||| |
|
|
| T |
9364674 |
tgtttactttggtgggactcttttttcc-gacacctttgaaatcgttgaggcctttaggttattcgagtgatggaaagaaggttttattggaaatagatc |
9364576 |
T |
|
| Q |
217 |
ttgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgt |
316 |
Q |
| |
|
| |||||||||||| ||| ||| | | ||||| | | |||| | |||| |||||||||| || | || | | |||| ||| |||||| |||||||| |
|
|
| T |
9364575 |
gtaagaagctgttttggtacgatctcaagagtgaaaacgttactagtgttccaggaattcctaatatgaatgaagctatgatttgtgttggtagtcttgt |
9364476 |
T |
|
| Q |
317 |
accaccttccttccctgttgataattctaggaag |
350 |
Q |
| |
|
||||||||| || ||||||||||||| ||||||| |
|
|
| T |
9364475 |
accaccttctttacctgttgataattgtaggaag |
9364442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 9294920 - 9295031
Alignment:
| Q |
302 |
tgttggaagtcttgtaccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt--ttgattat |
399 |
Q |
| |
|
||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
9294920 |
tgttgaaagtctcgtagcaccttccttccctgttgataattctagtaagaaggagaatcgtttaagcaagagcaagagaaggtacttctttattgattat |
9295019 |
T |
|
| Q |
400 |
atgagttttttg |
411 |
Q |
| |
|
||||||||||| |
|
|
| T |
9295020 |
ctgagttttttg |
9295031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 7115959 - 7116038
Alignment:
| Q |
312 |
cttgtaccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttctt |
391 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7115959 |
cttgtaccaccttccttccctgttgataattgtaggaagaaggagaatcatacaagcaagagcaagagaaggtacttctt |
7116038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 373
Target Start/End: Complemental strand, 10341328 - 10341140
Alignment:
| Q |
185 |
tgatggaaaaaaggttttgttgagggtagattttgagaagctgtttttgtatgattttaggagtgcacaagttagttat---gttgaaggaattcctgat |
281 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||| ||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
10341328 |
tgatggaaaattggttttgttgagggtagatgttgag---ctgttttggtatgatttggagagtgaacaagttagttattatgttgaaggaattcctgat |
10341232 |
T |
|
| Q |
282 |
ttccatcatgttatgttttctgttggaagtcttgtaccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagag |
373 |
Q |
| |
|
|| || ||| |||| | | |||||||||| | |||||||||| |||||||||||| ||| ||||||||||||||||| | |||||||||| |
|
|
| T |
10341231 |
ttggatgatgctatgatgtgtgttggaagtatagtaccacctttcttccctgttgacaatcgtaggaagaaggagaatccttcaagcaagag |
10341140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 10372004 - 10371853
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
||||| |||||||||||||| |||||| || ||||| |||||||| | ||||| |||||||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
10372004 |
gttttaggagggtgtctttgtatgactgtggattataaaactactaacgttgatatttgggtgatgaaagaatatggttctagagatagttggtgtaaac |
10371905 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacc |
169 |
Q |
| |
|
|||||||| ||| |||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
10371904 |
tttttactttggttaaatcaagtttgggtttacctttggaatctttgagacc |
10371853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 233 - 387
Target Start/End: Complemental strand, 9274431 - 9274277
Alignment:
| Q |
233 |
gtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtaccaccttccttccct |
332 |
Q |
| |
|
||||||||| | ||||| ||||||||||| |||| ||||||||||| | ||| || ||| ||| ||||||||| |||||||||| ||||||||| |
|
|
| T |
9274431 |
gtatgatttgaagagtgaacaagttagttttgttaaaggaattcctaacttcaatggaactattatttgggttggaagttttgtaccaccctccttccct |
9274332 |
T |
|
| Q |
333 |
gttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtact |
387 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
9274331 |
gttgataattctaggaagaaggagaatcatacaagcaagagcaagaaaaggtact |
9274277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 221 - 373
Target Start/End: Complemental strand, 10347707 - 10347552
Alignment:
| Q |
221 |
gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctg---atttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
||||||||||| ||||||||| | ||||| |||| ||||||||||||||||||||||| || | || | |||||||| ||||||||||||||| |
|
|
| T |
10347707 |
gaagctgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctcctaatatgaatgaaactatgttttgtgttggaagtcttgtc |
10347608 |
T |
|
| Q |
318 |
ccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagag |
373 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |
|
|
| T |
10347607 |
ccaccttccttccctgttgataatcgtaggaagaaggagaatcatccaagcaagag |
10347552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 9274667 - 9274560
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||| || ||||||| |||| ||||||||||||||| ||||||| | || ||||||||||||||||| |
|
|
| T |
9274667 |
gttttggaagggtgtctttgtatgactttgaattatcgaaatactgaatttgaagtttgggtgatgaaagaatatggttctacagatagttggtgtaaac |
9274568 |
T |
|
| Q |
118 |
tttttact |
125 |
Q |
| |
|
|||||||| |
|
|
| T |
9274567 |
tttttact |
9274560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 373
Target Start/End: Complemental strand, 10371780 - 10371625
Alignment:
| Q |
221 |
gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacca |
320 |
Q |
| |
|
||||||||||| ||||||||| | ||||| ||||||||||||||||||||||| | || |||| || ||| |||| ||| |||||| |||||||||||| |
|
|
| T |
10371780 |
gaagctgttttggtatgatttgaagagtgaacaagttagttatgttgaaggaaattctaatttggatgatgctatggtttgtgttggtagtcttgtacca |
10371681 |
T |
|
| Q |
321 |
ccttcc---ttccctgttgataattctaggaagaaggagaatcgtacaagcaagag |
373 |
Q |
| |
|
|| || | || |||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
10371680 |
ccacccccttaccttgttgataatggtaggaagaaggagaatcatacaagcaagag |
10371625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 373
Target Start/End: Original strand, 9065788 - 9065962
Alignment:
| Q |
196 |
aggttttgttgagggtagattttgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttat |
295 |
Q |
| |
|
||||||||||| ||||||| | ||||||| |||| ||||||||| | ||||| |||||||| ||||||||||||| ||||| ||| || | | | |
|
|
| T |
9065788 |
aggttttgttggaggtagatcatcagaagctcttttggtatgatttgaagagtgaacaagttatttatgttgaaggagttcctaattggaatgacactgt |
9065887 |
T |
|
| Q |
296 |
gttttctgttggaagtcttgtaccaccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagag |
373 |
Q |
| |
|
| ||| ||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||| |||||| |
|
|
| T |
9065888 |
gatttgtgttgaaagtcttgtaccaacttccttccctgttgataattgtag---gaaggagaatcgaacaaccaagag |
9065962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 7612061 - 7611978
Alignment:
| Q |
42 |
actttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttact |
125 |
Q |
| |
|
||||||||||||||||||| | | |||||||||||||||||||| ||||||||| | |||||||||||||||| | |||||| |
|
|
| T |
7612061 |
actttgaattatgaaactattaagtttgatgtttgggtgatgaaagaatatggattaaaagatagttggtgtaaattgtttact |
7611978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 17566103 - 17566177
Alignment:
| Q |
42 |
actttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaa |
116 |
Q |
| |
|
|||||||||||| |||||||| | |||||||||||||||| ||| ||||||||| |||||||| |||||||||| |
|
|
| T |
17566103 |
actttgaattatcaaactactaatgttgatgtttgggtgattaaagaatatggatttagagataattggtgtaaa |
17566177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 8579532 - 8579590
Alignment:
| Q |
67 |
ttgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttact |
125 |
Q |
| |
|
|||| ||||||||||||||| ||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
8579532 |
ttgaggtttgggtgatgaaaaaatatggatttagagatagttggtgtaaattgtttact |
8579590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 16269012 - 16268954
Alignment:
| Q |
220 |
agaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcct |
278 |
Q |
| |
|
||||| |||||| ||||||||| | ||||| || ||||||||||||||||||||||||| |
|
|
| T |
16269012 |
agaagttgttttggtatgatttgaagagtgaacgagttagttatgttgaaggaattcct |
16268954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8576405 - 8576449
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactact |
62 |
Q |
| |
|
||||| |||||||||||||| |||| | ||||||||||||||||| |
|
|
| T |
8576405 |
gtttttggagggtgtctttgtatgagtgtgaattatgaaactact |
8576449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 340
Target Start/End: Original strand, 8579703 - 8579823
Alignment:
| Q |
220 |
agaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacc |
319 |
Q |
| |
|
|||||||||||| ||||||| | | |||| | |||||| || |||| ||||||||||| ||||| || | |||| ||| |||||||| ||| |||| |
|
|
| T |
8579703 |
agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatttcaatgaaactatgatttatgttggaacccttctacc |
8579802 |
T |
|
| Q |
320 |
accttccttccctgttgataa |
340 |
Q |
| |
|
||||||||| ||| ||||||| |
|
|
| T |
8579803 |
accttccttgcctattgataa |
8579823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 126; Significance: 8e-65; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 18 - 331
Target Start/End: Original strand, 29453300 - 29453613
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
||||||| |||||||||||| |||| | |||||||| ||||| | ||||||||||||||||||||||| ||||||||| ||||||||| |||||| ||| |
|
|
| T |
29453300 |
gttttggaagggtgtctttgtatgattgtgaattatcaaactgttaaaattgatgtttgggtgatgaaagaatatggatgtagagatagctggtgtgaac |
29453399 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
|||||||| ||| |||| |||||| ||||||||||||| ||||| | ||| ||| ||||| ||| ||||||| | |||| ||||| ||||||| |
|
|
| T |
29453400 |
tttttactttggcggaatcatgtttcattttacctttgaaaactttgtggcctttagcttattcgagcgatggaagtatggttctgttggaagtagattg |
29453499 |
T |
|
| Q |
218 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
|||||||||||||| ||||||| | | ||||| ||||||||||| |||||||||||||||| ||||| |||| | |||| ||| ||||||||||||||| |
|
|
| T |
29453500 |
tgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttgaaggaattcctaatttcgatcaagctatgatttgtgttggaagtcttgtg |
29453599 |
T |
|
| Q |
318 |
ccaccttccttccc |
331 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
29453600 |
ccaccttccttccc |
29453613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 332
Target Start/End: Original strand, 29467776 - 29468090
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
||||||||||||||||||| ||| | |||||||| |||||| | |||||||||||||| |||||||| ||||||||| ||||||||||||| |||||| |
|
|
| T |
29467776 |
gttttgggagggtgtctttagttgattgtgaattatcaaactagtaaaattgatgtttggttgatgaaagaatatggatgtagagatagttggcgtaaac |
29467875 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
|||||||| ||| || |||||||||| ||||| ||| |||||||||| ||| ||||||||| ||| ||||||| | |||| |||| ||||| |
|
|
| T |
29467876 |
tttttactttggttagatcgtgtttcactttacagttggaatctttgaggcctttaggttattcgagcgatggaagtatggttctgtttgaagtagacca |
29467975 |
T |
|
| Q |
218 |
tgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgta |
317 |
Q |
| |
|
||||||| |||||| ||||||| | | ||||| ||| |||| ||||||||||||||||||| |||| || | | |||| ||| |||||||||||||||| |
|
|
| T |
29467976 |
tgagaagttgttttggtatgatctcaagagtgaacatgttaattatgttgaaggaattcctaatttgaatgaagctatgatttgtgttggaagtcttgta |
29468075 |
T |
|
| Q |
318 |
ccaccttccttccct |
332 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
29468076 |
ccaccttccttccct |
29468090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 26 - 332
Target Start/End: Complemental strand, 29423403 - 29423097
Alignment:
| Q |
26 |
agggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttact |
125 |
Q |
| |
|
|||||| ||||| |||||| |||||||| ||||| | |||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
29423403 |
agggtgcctttgtatgactgtgaattatcaaactgttaaaattgatgtttggctgatgaaagaatatggatgtagagatagctggtgtaaactttttact |
29423304 |
T |
|
| Q |
126 |
atggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattttgagaagc |
225 |
Q |
| |
|
||| ||||||||||| |||||||||||| ||||||| | | ||| ||||| ||| |||||| | |||| ||||| |||||| |||||||| |
|
|
| T |
29423303 |
ttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaggtatggttctgttgcaagtagatcctgagaagc |
29423204 |
T |
|
| Q |
226 |
tgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtaccaccttc |
325 |
Q |
| |
|
|||||| ||||||| | | ||||| ||||||||||| |||| ||||||||||| ||||| |||| | ||| ||| |||||||||||||||| ||||||| |
|
|
| T |
29423203 |
tgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttc |
29423104 |
T |
|
| Q |
326 |
cttccct |
332 |
Q |
| |
|
||||||| |
|
|
| T |
29423103 |
cttccct |
29423097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 26 - 331
Target Start/End: Original strand, 29443325 - 29443630
Alignment:
| Q |
26 |
agggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttact |
125 |
Q |
| |
|
|||||||||||| |||| | |||||||| ||||| || ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
29443325 |
agggtgtctttgtatgattgtgaattatcaaactgctaaaattgatgtttgggtgatgaaagaatatggatgtagagatagctggtgtaaactttttact |
29443424 |
T |
|
| Q |
126 |
atggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattttgagaagc |
225 |
Q |
| |
|
||| | ||||||||||| ||||||||||| | ||||||| | ||||||||| ||| ||| ||| | |||| ||||| |||||| |||||||| |
|
|
| T |
29443425 |
ttggctgaatcgtgtttcagtttacctttgagagctttgaggattttaggttattcgagcgatagaagtatggttctgttgcaagtagatcgtgagaagc |
29443524 |
T |
|
| Q |
226 |
tgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtaccaccttc |
325 |
Q |
| |
|
|||||| ||||||| | | ||||| | |||||||||||||||||||||||| | |||||| || ||| ||||||||||||||||| |||||| |
|
|
| T |
29443525 |
tgttttggtatgatctcaagagtgaatgtgttagttatgttgaaggaattcctagggtggatcatgccatcatttgtgttggaagtcttgtacaaccttc |
29443624 |
T |
|
| Q |
326 |
cttccc |
331 |
Q |
| |
|
||||| |
|
|
| T |
29443625 |
tttccc |
29443630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 29468109 - 29468170
Alignment:
| Q |
372 |
agcaagagaaggtacttctt-ttgattatatgagttttttgagtttttgctatgtataagtt |
432 |
Q |
| |
|
|||||||||||||||||||| |||||| | ||||||||||||||||||| |||||||||||| |
|
|
| T |
29468109 |
agcaagagaaggtacttcttattgattgtctgagttttttgagtttttgttatgtataagtt |
29468170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 24 - 322
Target Start/End: Complemental strand, 26575001 - 26574700
Alignment:
| Q |
24 |
ggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaacttttta |
123 |
Q |
| |
|
|||||||||||||| |||||| || ||||| || |||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26575001 |
ggagggtgtctttgtatgactgtggattataaagatactaaaattgatgtttgggtgatgaaagaatatggatgtagagatagttggtgtaaacttttta |
26574902 |
T |
|
| Q |
124 |
ctatggataaatcgtgtttc---catttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattttga |
220 |
Q |
| |
|
|| ||| ||||||||||||| |||||||| || |||||||||| | | ||||||||| | ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26574901 |
ctgtggttaaatcgtgtttcgatgatttacctgtggaatctttgaggcttttaggttattccattgatggaaaaaaggttttgttgagggtagatgttgt |
26574802 |
T |
|
| Q |
221 |
gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacca |
320 |
Q |
| |
|
||| ||||||| ||||||||| |||| ||||||||| || || ||| | || |||||| || | | |||| ||| ||||||||||||||||||| |
|
|
| T |
26574801 |
gaatctgttttggtatgatttggagagtaatcaagttagtcattttcaagaagatcttgatttggatgacgctatgatttgtgttggaagtcttgtacca |
26574702 |
T |
|
| Q |
321 |
cc |
322 |
Q |
| |
|
|| |
|
|
| T |
26574701 |
cc |
26574700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 561340 - 561273
Alignment:
| Q |
46 |
tgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgt |
113 |
Q |
| |
|
||||| || |||||||| | ||||||||||||| |||||| ||||||||| |||||||||||||||| |
|
|
| T |
561340 |
tgaataataaaactactaaggttgatgtttgggtaatgaaagaatatggatttagagatagttggtgt |
561273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 37462638 - 37462447
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaa---ctactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgta |
114 |
Q |
| |
|
||||||||||| |||||||| |||||| |||||||| ||| ||||| || |||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
37462638 |
gttttgggaggctgtctttgtatgactgtgaattataaaaaaactactaaatttgatgtttgggtgatgaaagaatatggatctagagatagttggtgta |
37462539 |
T |
|
| Q |
115 |
aactttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttg |
206 |
Q |
| |
|
|||||| |||| ||||||||||||||||| || |||||||||||||||||| ||| || |||||| |||||||||| |||||||||||| |
|
|
| T |
37462538 |
aactttgtactgtggataaatcgtgtttcacttcacctttgaaatctttgaggcctttatgttattctagtgatggaagtaaggttttgttg |
37462447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 395
Target Start/End: Complemental strand, 37462410 - 37462234
Alignment:
| Q |
222 |
aagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatca---tgttatgttttctgttggaagtcttgtac |
318 |
Q |
| |
|
|||||||||| |||||||| | ||||| ||||||||||||| |||||||| ||||| |||| || || |||| ||| ||||| |||||||||| |
|
|
| T |
37462410 |
aagctgttttggtatgattggaagagtgaacaagttagttatattgaaggagttcctaatttgaatggagctgctatgatttgtgttgaaagtcttgtat |
37462311 |
T |
|
| Q |
319 |
caccttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttcttttga |
395 |
Q |
| |
|
||||| | |||||||||||||||| ||||||||||||| | | ||||||||||||||||||||||| ||||||||| |
|
|
| T |
37462310 |
cacctcctttccctgttgataattgtaggaagaaggaggacaggacaagcaagagcaagagaaggtatttcttttga |
37462234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 39427740 - 39427682
Alignment:
| Q |
67 |
ttgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttact |
125 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||||||||||| | |||||| |
|
|
| T |
39427740 |
ttgatgtttgggtgatgaaagaatatggatatagatatagttggtgtaaattgtttact |
39427682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 91; Significance: 6e-44; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 45243845 - 45243675
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||| ||||||||| |||| | |||||||| |||||| ||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||| |
|
|
| T |
45243845 |
gttttgggagagtgtctttgtatgattgtgaattatcaaactaatgaaattgatgtttgggtgatgaaagaatatggttctagagatatttggtgtaaac |
45243746 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgat |
188 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||| | |||| |||||||||| ||| || |||||| ||||||| |
|
|
| T |
45243745 |
tttttactttggttaaatcgtgtttcaattttcatttggaatctttgaggcctttatgttattcgagtgat |
45243675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 45230570 - 45230408
Alignment:
| Q |
29 |
gtgtctttgcatgactttgaattatgaaactactgaaattgatg---tttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttact |
125 |
Q |
| |
|
||||||||| |||| | |||||||| |||||| | ||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
45230570 |
gtgtctttgtatgattgtgaattatcaaactaataaaattgatgatgtttgggtgatgaaagaatatggttctagagatagttggtgtaaactttttact |
45230471 |
T |
|
| Q |
126 |
atggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgat |
188 |
Q |
| |
|
||| ||||||||| ||| |||| | |||| ||||||||||||| || |||||| ||||||| |
|
|
| T |
45230470 |
ttggttaaatcgtggttcaattttcatttggtatctttgagacctttatgttattcgagtgat |
45230408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 45238059 - 45237966
Alignment:
| Q |
55 |
aaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttactatggataaatcgtgtttccattt |
148 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | | | ||||||||||| |||| |
|
|
| T |
45238059 |
aaactactcaaattgatgtttgggtgatgaaagaatatggatctagagatagttggtgtaaactttttactttagttgaatcgtgtttcaattt |
45237966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 45230351 - 45230294
Alignment:
| Q |
221 |
gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcct |
278 |
Q |
| |
|
||||||||||| ||||||||| | ||||| |||||||| | ||||| ||||||||||| |
|
|
| T |
45230351 |
gaagctgttttggtatgatttcaagagtgaacaagttactcatgttcaaggaattcct |
45230294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0667 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0667
Description:
Target: scaffold0667; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 4615 - 4443
Alignment:
| Q |
20 |
tttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactt |
119 |
Q |
| |
|
||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
4615 |
tttgggaggatgtctttgtatgactgtgaattatgaaactactaaaattgatgtttgggtgatgaaacaatatggattaaaagatagttggtgtaaactt |
4516 |
T |
|
| Q |
120 |
tttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaa |
192 |
Q |
| |
|
||||||||| ||||||||| || || || ||||||||||| ||| ||| || |||||| |||||||||| |
|
|
| T |
4515 |
tttactatgatgaaatcgtgtgtcacttcacatttgaaatcttcgagtcctttatgttattctagtgatggaa |
4443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0667; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 220 - 432
Target Start/End: Complemental strand, 4394 - 4188
Alignment:
| Q |
220 |
agaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtcttgtacc |
319 |
Q |
| |
|
|||||||||||| ||||||||| | || || |||||||||||||| ||| ||||||||||||| || | || | ||| |||||||||||||||||| |
|
|
| T |
4394 |
agaagctgttttggtatgatttgaagactgaacaagttagttatg---aagaaattcctgatttcaatggagctaagatttgtgttggaagtcttgtacc |
4298 |
T |
|
| Q |
320 |
accttccttccctgttgataattctaggaagaaggagaatcgtacaagcaagagcaagagaaggtacttcttttgattatatgagttttttgagtttttg |
419 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||||| |||||||| | |||||||| ||||||||| |||||||| |
|
|
| T |
4297 |
accttcctttcctgttgataattctagtaagaaggagaatcatacatgcaagagcaagaaaaggtact--tattgattat-cgagttttttcagtttttg |
4201 |
T |
|
| Q |
420 |
ctatgtataagtt |
432 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
4200 |
ctgtgtataagtt |
4188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 342
Target Start/End: Original strand, 41966701 - 41967028
Alignment:
| Q |
18 |
gttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaac |
117 |
Q |
| |
|
|||||||||||||||||||| ||| | || ||||| |||||| || |||||||||||||||||||| ||||| ||| ||||||||| |||||||||| |
|
|
| T |
41966701 |
gttttgggagggtgtctttgtatggttgtggattatcaaactagcgatgttgatgtttgggtgatgaaagaatatcgatctagagatagctggtgtaaac |
41966800 |
T |
|
| Q |
118 |
tttttactatggataaatcgtgtttccatttacctttgaaatctttgagacctgtaggttatttgagtgatggaaaaaaggttttgttgagggtagattt |
217 |
Q |
| |
|
|||||||| ||| |||||| |||||| || | |||||||||| ||| | | |||||| || || ||||||| |||||| ||||| | | | |
|
|
| T |
41966801 |
tttttactttggttaaatcttgtttcacttcatctttgaaatccttgggggttttaggttgttctagcgatggaaggaaggttctgttgcaaggaattaa |
41966900 |
T |
|
| Q |
218 |
tga---gaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatcatgttatgttttctgttggaagtctt |
314 |
Q |
| |
|
||| ||| ||||||| ||||||||| | ||||| |||| ||| ||||||||||||||||||| |||| || | | ||||||| ||||||||||||| |
|
|
| T |
41966901 |
tgatttgaaactgttttggtatgatttgaagagtgaacaaattacttatgttgaaggaattcctaattttgatgaagccatgttttgtgttggaagtctt |
41967000 |
T |
|
| Q |
315 |
gtaccaccttccttccctgttgataatt |
342 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
41967001 |
gtaccaccttccttccctgttgttaatt |
41967028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 36224532 - 36224457
Alignment:
| Q |
50 |
ttatgaaactactgaaattgatgtttgggtgatgaaacaatatggatatagagatagttggtgtaaactttttact |
125 |
Q |
| |
|
||||| ||||| | || |||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
36224532 |
ttatggaactaataaatttgatgtttgggtgatgaaagaatatggatttagagatagttggtgtaaattgtttact |
36224457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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