View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6961_high_3 (Length: 325)

Name: NF6961_high_3
Description: NF6961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6961_high_3
NF6961_high_3
[»] chr8 (38 HSPs)
chr8 (1-319)||(20559372-20559689)
chr8 (1-319)||(20570934-20571251)
chr8 (1-319)||(20552870-20553186)
chr8 (4-53)||(10377836-10377885)
chr8 (4-53)||(31013501-31013550)
chr8 (1-53)||(7677176-7677228)
chr8 (1-53)||(7883134-7883186)
chr8 (1-53)||(16928650-16928702)
chr8 (1-53)||(23230787-23230839)
chr8 (1-53)||(37971427-37971479)
chr8 (5-53)||(40618966-40619014)
chr8 (5-53)||(43833889-43833937)
chr8 (1-53)||(9637302-9637354)
chr8 (5-53)||(18890592-18890640)
chr8 (1-53)||(30568214-30568266)
chr8 (5-52)||(28086706-28086753)
chr8 (1-52)||(29939444-29939495)
chr8 (4-53)||(3673588-3673637)
chr8 (5-54)||(14916080-14916129)
chr8 (8-53)||(15344459-15344504)
chr8 (8-53)||(15433524-15433569)
chr8 (8-53)||(15524828-15524873)
chr8 (9-53)||(14585829-14585873)
chr8 (5-49)||(40211199-40211243)
chr8 (9-53)||(41896669-41896713)
chr8 (5-48)||(14913236-14913279)
chr8 (5-52)||(29617168-29617215)
chr8 (9-51)||(16247118-16247160)
chr8 (8-53)||(1236590-1236635)
chr8 (8-53)||(1239290-1239335)
chr8 (5-49)||(5333577-5333621)
chr8 (5-53)||(12184437-12184485)
chr8 (5-53)||(12428865-12428913)
chr8 (1-53)||(25190958-25191010)
chr8 (5-53)||(27110358-27110406)
chr8 (4-52)||(33214565-33214613)
chr8 (5-53)||(35283256-35283304)
chr8 (5-53)||(45445704-45445752)
[»] chr7 (34 HSPs)
chr7 (4-53)||(34899502-34899551)
chr7 (5-53)||(12141203-12141251)
chr7 (1-53)||(39171485-39171537)
chr7 (1-53)||(47590455-47590507)
chr7 (1-53)||(48061566-48061618)
chr7 (1-53)||(8001441-8001493)
chr7 (1-49)||(9450036-9450084)
chr7 (1-53)||(42978754-42978806)
chr7 (1-53)||(45349694-45349746)
chr7 (1-53)||(48316707-48316759)
chr7 (4-53)||(13796824-13796873)
chr7 (5-53)||(19404652-19404700)
chr7 (1-53)||(28044651-28044703)
chr7 (5-53)||(28407813-28407861)
chr7 (1-53)||(37837353-37837405)
chr7 (4-53)||(40993304-40993353)
chr7 (9-53)||(35133099-35133143)
chr7 (5-53)||(38798929-38798977)
chr7 (5-53)||(43369649-43369697)
chr7 (9-53)||(48930859-48930903)
chr7 (6-53)||(5348487-5348534)
chr7 (5-52)||(24069290-24069337)
chr7 (5-52)||(27341698-27341745)
chr7 (1-55)||(24770390-24770444)
chr7 (5-51)||(25287083-25287129)
chr7 (5-51)||(46700183-46700229)
chr7 (4-49)||(19297017-19297062)
chr7 (5-53)||(3398338-3398386)
chr7 (5-53)||(9977105-9977153)
chr7 (8-52)||(17773421-17773465)
chr7 (9-49)||(22743096-22743136)
chr7 (5-53)||(35665030-35665078)
chr7 (5-53)||(41553329-41553377)
chr7 (5-53)||(46822638-46822685)
[»] chr2 (38 HSPs)
chr2 (4-53)||(33585631-33585680)
chr2 (4-53)||(7646633-7646682)
chr2 (1-53)||(1421828-1421880)
chr2 (1-53)||(7677769-7677821)
chr2 (1-53)||(18763620-18763672)
chr2 (1-53)||(31788608-31788660)
chr2 (1-53)||(36692026-36692078)
chr2 (1-53)||(43397014-43397066)
chr2 (7-53)||(9169154-9169200)
chr2 (4-53)||(4100491-4100540)
chr2 (8-53)||(32448512-32448557)
chr2 (1-53)||(11985129-11985181)
chr2 (1-53)||(12554077-12554129)
chr2 (5-53)||(23933515-23933563)
chr2 (5-53)||(37876502-37876550)
chr2 (5-51)||(29279468-29279514)
chr2 (7-53)||(33760089-33760135)
chr2 (4-49)||(4778908-4778953)
chr2 (8-53)||(17249043-17249088)
chr2 (4-53)||(27097303-27097352)
chr2 (5-54)||(28533849-28533898)
chr2 (9-53)||(3309105-3309149)
chr2 (5-53)||(4904041-4904089)
chr2 (1-53)||(5427765-5427817)
chr2 (5-53)||(6358777-6358825)
chr2 (9-53)||(10237112-10237156)
chr2 (6-54)||(19597996-19598044)
chr2 (5-53)||(25508964-25509012)
chr2 (5-53)||(37994440-37994488)
chr2 (4-52)||(38445321-38445369)
chr2 (1-35)||(31210521-31210555)
chr2 (1-53)||(1415709-1415761)
chr2 (1-53)||(12677347-12677398)
chr2 (17-53)||(19062243-19062279)
chr2 (5-37)||(31128692-31128724)
chr2 (1-53)||(33923857-33923909)
chr2 (5-53)||(37416866-37416914)
chr2 (8-52)||(41327898-41327942)
[»] chr5 (24 HSPs)
chr5 (1-53)||(24229679-24229731)
chr5 (1-53)||(38597938-38597990)
chr5 (4-53)||(13007373-13007422)
chr5 (4-53)||(26825574-26825623)
chr5 (1-52)||(14082292-14082343)
chr5 (4-53)||(9113620-9113669)
chr5 (4-53)||(25980301-25980350)
chr5 (1-53)||(8096393-8096445)
chr5 (8-53)||(8088107-8088152)
chr5 (4-53)||(34945537-34945586)
chr5 (9-53)||(2979201-2979245)
chr5 (1-53)||(11976830-11976882)
chr5 (1-53)||(31391648-31391700)
chr5 (1-53)||(35850940-35850992)
chr5 (1-53)||(38007499-38007550)
chr5 (1-40)||(7930318-7930357)
chr5 (5-52)||(41630647-41630694)
chr5 (5-54)||(10722906-10722955)
chr5 (6-55)||(37986006-37986055)
chr5 (5-53)||(13422078-13422126)
chr5 (9-53)||(14211376-14211420)
chr5 (1-37)||(14726372-14726408)
chr5 (9-53)||(28540801-28540845)
chr5 (5-49)||(35920895-35920939)
[»] chr3 (55 HSPs)
chr3 (1-53)||(21533704-21533756)
chr3 (1-53)||(38860007-38860059)
chr3 (1-53)||(45568340-45568392)
chr3 (4-53)||(4711626-4711675)
chr3 (4-53)||(9998611-9998660)
chr3 (4-53)||(10108380-10108429)
chr3 (4-53)||(10229620-10229669)
chr3 (4-53)||(10233214-10233263)
chr3 (4-53)||(48650629-48650678)
chr3 (1-53)||(33580021-33580073)
chr3 (1-53)||(38545940-38545992)
chr3 (1-52)||(43017029-43017080)
chr3 (1-55)||(12050541-12050595)
chr3 (5-51)||(19619858-19619904)
chr3 (4-53)||(6954591-6954640)
chr3 (9-54)||(8914861-8914906)
chr3 (4-53)||(9797429-9797478)
chr3 (4-53)||(21431757-21431806)
chr3 (5-54)||(26739251-26739300)
chr3 (4-53)||(44959868-44959917)
chr3 (1-54)||(46304414-46304467)
chr3 (4-53)||(52923012-52923061)
chr3 (8-53)||(53807753-53807798)
chr3 (9-53)||(7546764-7546808)
chr3 (5-53)||(20987650-20987698)
chr3 (9-53)||(21289709-21289753)
chr3 (5-53)||(21313181-21313229)
chr3 (5-53)||(23799805-23799853)
chr3 (5-53)||(29922202-29922250)
chr3 (5-53)||(29971355-29971403)
chr3 (1-53)||(40487466-40487518)
chr3 (9-53)||(51303538-51303582)
chr3 (9-53)||(51923876-51923920)
chr3 (5-52)||(7792083-7792130)
chr3 (4-46)||(40556846-40556888)
chr3 (8-53)||(628818-628863)
chr3 (1-54)||(47896293-47896345)
chr3 (9-49)||(3085200-3085240)
chr3 (5-53)||(20464865-20464913)
chr3 (9-53)||(27706121-27706165)
chr3 (5-53)||(27856310-27856358)
chr3 (5-53)||(42460894-42460942)
chr3 (1-49)||(43488489-43488537)
chr3 (9-52)||(9173897-9173940)
chr3 (5-52)||(26275715-26275762)
chr3 (4-49)||(12149683-12149728)
chr3 (4-53)||(32701635-32701684)
chr3 (5-50)||(54149136-54149181)
chr3 (4-52)||(7448810-7448858)
chr3 (4-52)||(7456952-7457000)
chr3 (9-53)||(16235575-16235619)
chr3 (5-53)||(19339320-19339368)
chr3 (5-53)||(44805174-44805222)
chr3 (5-49)||(46220808-46220852)
chr3 (9-53)||(50194230-50194274)
[»] chr1 (37 HSPs)
chr1 (1-53)||(14872784-14872836)
chr1 (3-53)||(35484286-35484336)
chr1 (1-53)||(7836691-7836743)
chr1 (1-53)||(16989516-16989568)
chr1 (1-53)||(34878173-34878225)
chr1 (3-53)||(19596355-19596405)
chr1 (1-54)||(4413259-4413312)
chr1 (4-53)||(5983984-5984033)
chr1 (5-50)||(15492436-15492481)
chr1 (8-53)||(19061061-19061106)
chr1 (8-53)||(24583298-24583343)
chr1 (1-53)||(3228414-3228466)
chr1 (1-53)||(31984306-31984358)
chr1 (9-53)||(36775605-36775649)
chr1 (9-53)||(48750338-48750382)
chr1 (1-40)||(45415703-45415742)
chr1 (3-53)||(7337558-7337608)
chr1 (3-53)||(31919136-31919186)
chr1 (4-53)||(11462377-11462426)
chr1 (4-53)||(21947513-21947562)
chr1 (8-53)||(24583102-24583147)
chr1 (4-53)||(32395146-32395195)
chr1 (8-53)||(44543424-44543469)
chr1 (5-46)||(44915788-44915829)
chr1 (5-53)||(6217718-6217766)
chr1 (1-53)||(10776356-10776408)
chr1 (1-53)||(23291537-23291589)
chr1 (5-53)||(51373753-51373801)
chr1 (5-52)||(16161977-16162024)
chr1 (5-55)||(5856058-5856108)
chr1 (5-50)||(16263010-16263055)
chr1 (5-53)||(13144707-13144755)
chr1 (5-40)||(19052221-19052257)
chr1 (1-49)||(21687523-21687571)
chr1 (1-53)||(29738559-29738611)
chr1 (9-53)||(34412987-34413031)
chr1 (9-53)||(47133056-47133100)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-53)||(71765-71814)
[»] chr6 (30 HSPs)
chr6 (4-53)||(33053063-33053112)
chr6 (1-53)||(3913469-3913521)
chr6 (4-53)||(67896-67945)
chr6 (4-53)||(606350-606399)
chr6 (4-49)||(23128764-23128809)
chr6 (9-53)||(546182-546226)
chr6 (1-53)||(12170611-12170663)
chr6 (9-53)||(14801978-14802022)
chr6 (1-53)||(14846116-14846168)
chr6 (5-53)||(30608410-30608458)
chr6 (6-53)||(20225999-20226046)
chr6 (6-53)||(22119983-22120030)
chr6 (5-53)||(127816-127862)
chr6 (4-53)||(9341546-9341595)
chr6 (1-53)||(7515097-7515149)
chr6 (5-53)||(9380170-9380218)
chr6 (5-53)||(30776810-30776858)
chr6 (1-53)||(30894742-30894794)
chr6 (1-36)||(32327129-32327164)
chr6 (4-54)||(14174965-14175015)
chr6 (4-54)||(14179501-14179551)
chr6 (4-53)||(29319772-29319822)
chr6 (12-53)||(21426581-21426622)
chr6 (5-50)||(30493679-30493724)
chr6 (5-49)||(528249-528293)
chr6 (5-53)||(1523555-1523603)
chr6 (8-52)||(1704028-1704072)
chr6 (5-53)||(8102873-8102921)
chr6 (5-53)||(29255341-29255389)
chr6 (5-49)||(31296967-31297011)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-53)||(1486-1538)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-53)||(15634-15686)
[»] chr4 (38 HSPs)
chr4 (1-53)||(56040541-56040593)
chr4 (3-53)||(9178517-9178567)
chr4 (4-53)||(19853407-19853456)
chr4 (8-53)||(47320307-47320352)
chr4 (4-53)||(48257527-48257576)
chr4 (4-53)||(53811193-53811242)
chr4 (5-53)||(2520945-2520993)
chr4 (1-53)||(10496497-10496549)
chr4 (1-53)||(21686137-21686189)
chr4 (1-53)||(24098963-24099014)
chr4 (1-53)||(35348469-35348521)
chr4 (9-53)||(36194878-36194922)
chr4 (5-53)||(37465648-37465696)
chr4 (5-55)||(22305514-22305564)
chr4 (5-51)||(29120276-29120322)
chr4 (8-53)||(6155118-6155163)
chr4 (4-49)||(22611348-22611393)
chr4 (9-54)||(27652113-27652158)
chr4 (12-53)||(31891182-31891223)
chr4 (4-53)||(32766679-32766728)
chr4 (5-50)||(45418678-45418723)
chr4 (1-53)||(13634277-13634329)
chr4 (5-53)||(29960844-29960892)
chr4 (7-55)||(42032422-42032470)
chr4 (5-52)||(7008885-7008932)
chr4 (1-54)||(21662599-21662652)
chr4 (1-54)||(21671363-21671416)
chr4 (4-53)||(43510361-43510410)
chr4 (5-37)||(2069491-2069523)
chr4 (4-40)||(4142660-4142696)
chr4 (1-53)||(17949219-17949271)
chr4 (1-53)||(17953071-17953123)
chr4 (9-53)||(18935952-18935996)
chr4 (5-53)||(21554685-21554733)
chr4 (12-52)||(35395551-35395591)
chr4 (5-53)||(36184697-36184745)
chr4 (5-53)||(44596826-44596874)
chr4 (1-53)||(53444280-53444332)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-54)||(65936-65986)
[»] scaffold0088 (1 HSPs)
scaffold0088 (4-53)||(50921-50970)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-53)||(1868-1920)
[»] scaffold0064 (1 HSPs)
scaffold0064 (5-49)||(18981-19025)
[»] scaffold0219 (1 HSPs)
scaffold0219 (6-53)||(14766-14813)
[»] scaffold0136 (1 HSPs)
scaffold0136 (3-53)||(9937-9987)
[»] scaffold0634 (1 HSPs)
scaffold0634 (4-49)||(8657-8702)
[»] scaffold0017 (1 HSPs)
scaffold0017 (5-54)||(32641-32690)
[»] scaffold0049 (1 HSPs)
scaffold0049 (5-53)||(71195-71243)
[»] scaffold0009 (1 HSPs)
scaffold0009 (9-53)||(57983-58027)


Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 20559689 - 20559372
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttgaaagaattataccactattgtaaagccnnnnnnnnnnnnnnnnnntt 100  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| | |||  ||||||                  ||    
T  20559689 taggttttatcatattatttgtgggcattttgccgttgtatgctattaacttgaaagaattatacctccattaaaaagccaaaaaaaaattaaaaatatt 20559590  T
Q  101 atatatagaaataaccatgtgcaattaaatgcacaatacggccaaaggataaagtaaaatacaaaactaaagataaagaatactaaagaagtagttaatc 200  Q
    || ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20559589 atgtatagaaataaccatgtacaattaaatgcacaatacggccaaaagataaagtaaaatacaaaactaaagataaagaatactaaagaagtagctaatc 20559490  T
Q  201 aattttaaatgagacaacagaaataaatcacgttataagctaaataaattaatcaacattgcaaaacgcaaaagtttttatactaaggaagatagatgat 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  20559489 aattttaaatgagacaactgaaataaatcacgttataagctaaattaattaattaacatggcaaaacgcaaaagttttt-tactaagtaagatagatgat 20559391  T
Q  301 aaaataggatgatgtccat 319  Q
    |||||||||| || |||||    
T  20559390 aaaataggattatttccat 20559372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 20571251 - 20570934
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttgaaagaattataccactattgtaaagccnnnnnnnnnnnnnnnnnntt 100  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| | |||  ||||||                  ||    
T  20571251 taggttttatcatattatttgtgggcattttgccgttgtatgctattaacttgaaagaattatacctccattaaaaagccaaaaaaaaattaaaaatatt 20571152  T
Q  101 atatatagaaataaccatgtgcaattaaatgcacaatacggccaaaggataaagtaaaatacaaaactaaagataaagaatactaaagaagtagttaatc 200  Q
    || ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20571151 atgtatagaaataaccatgtacaattaaatgcacaatacggccaaaagataaagtaaaatacaaaactaaagataaagaatactaaagaagtagctaatc 20571052  T
Q  201 aattttaaatgagacaacagaaataaatcacgttataagctaaataaattaatcaacattgcaaaacgcaaaagtttttatactaaggaagatagatgat 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  20571051 aattttaaatgagacaactgaaataaatcacgttataagctaaattaattaattaacatggcaaaacgcaaaagttttt-tactaagtaagatagatgat 20570953  T
Q  301 aaaataggatgatgtccat 319  Q
    |||||||||| || |||||    
T  20570952 aaaataggattatttccat 20570934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 20553186 - 20552870
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttgaaagaattataccactattgtaaagccnnnnnnnnnnnnnnnnnntt 100  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||                  ||    
T  20553186 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgaaagaattatacctcaattataaagccaaaaaaaattaaaaata-tt 20553088  T
Q  101 atatatagaaataaccatgtgcaattaaatgcacaatacggccaaaggataaagtaaaatacaaaactaaagataaagaatactaaagaagtagttaatc 200  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  20553087 atgtatagaaataaccatgtacaattaaatgcacaatacggccaaaggataaagtaaaatacaaaactaaagatagagaacactaaagaagtagctaatc 20552988  T
Q  201 aattttaaatgagacaacagaaataaatcacgttataagctaaataaattaatcaacattgcaaaacgcaaaagtttttatactaaggaagatagatgat 300  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||| ||||||||||||    
T  20552987 aattttaaatgaaacaactgaaataaatcacgttataagctaaataaattaatcaacatggagaaacgcaaaagttttt-tactaagtaagatagatgat 20552889  T
Q  301 aaaataggatgatgtccat 319  Q
    |||||||||| || |||||    
T  20552888 aaaataggattatttccat 20552870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 10377836 - 10377885
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  10377836 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 10377885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 31013550 - 31013501
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  31013550 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 31013501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7677228 - 7677176
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  7677228 taggttttatcatattatttgtaagcattttgccgttgtatgttattaacttg 7677176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7883186 - 7883134
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  7883186 taggttttatcatattatttgtaggcattttgccgttgtatcctattaacttg 7883134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16928702 - 16928650
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  16928702 taggttttatcatattatttgtaggcattttgccattgtatgctattaacttg 16928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23230787 - 23230839
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  23230787 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 23230839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37971427 - 37971479
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  37971427 taggttttatcacattatttgtaggcattttgccgttgtatgctattaacttg 37971479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 40619014 - 40618966
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  40619014 ttttatcatattatgtgtatgcattttgccgttgtatgctattaacttg 40618966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 43833937 - 43833889
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  43833937 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 43833889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9637354 - 9637302
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| || |||||||| ||||||| ||||||||||||    
T  9637354 taggttttatcatattatttttaggcattttgtcgttgtatgctattaacttg 9637302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 18890640 - 18890592
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  18890640 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 18890592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30568266 - 30568214
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||| ||||||||| ||||||||||||| || ||||||||||||    
T  30568266 taggttttatcatgttatttgtaggcattttgccgttttatgctattaacttg 30568214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 28086753 - 28086706
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  28086753 ttttatcatattatttgtaggcattttgtcgttgtatgctattaactt 28086706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29939444 - 29939495
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||||||||||||||||||||||  ||||||||||||||| | |||||||||    
T  29939444 taggttttatcatattatttgtagtcattttgccgttgtatgatattaactt 29939495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 3673588 - 3673637
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||| ||||||||||||||| ||||||||||||||||  |||||||||||    
T  3673588 gtttaatcatattatttgtaggcattttgccgttgtatcctattaacttg 3673637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 14916129 - 14916080
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||| |||||| ||||||||| |||||| |||||||||||||    
T  14916129 ttttatcatattgtttgtaggcattttgcagttgtatgctattaacttga 14916080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 15344459 - 15344504
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||    
T  15344459 tatcatattatttgtaggcattttgtcgttgtatgctattaacttg 15344504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 15433524 - 15433569
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||    
T  15433524 tatcatattatttgtaggcattttgtcgttgtatgctattaacttg 15433569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 15524828 - 15524873
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||    
T  15524828 tatcatattatttgtaggcattttgtcgttgtatgctattaacttg 15524873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 14585829 - 14585873
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||    
T  14585829 atcatattatttgtaggcgttttgccgttgtatgctattaacttg 14585873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 40211243 - 40211199
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  40211243 ttttatcatattatttgtaagcattatgccgttgtatgctattaa 40211199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 41896669 - 41896713
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||    
T  41896669 atcatattatttgtaggcattttgtcgttgtatgctattaacttg 41896713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 14913236 - 14913279
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctatta 48  Q
    ||||||||||||||||||| | |||||||||||||| |||||||    
T  14913236 ttttatcatattatttgtaggtattttgccgttgtatgctatta 14913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 29617215 - 29617168
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||| ||||||||  |||||| |||||||||||    
T  29617215 ttttatcatattatttgtaggcattttgttgttgtatgctattaactt 29617168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 16247160 - 16247118
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaact 51  Q
    ||||||||||||| | |||||||||||||||| ||||||||||    
T  16247160 atcatattatttgaaggcattttgccgttgtatgctattaact 16247118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 1236635 - 1236590
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| ||||| || |||||||||||||||| ||||||||||||    
T  1236635 tatcatactatttttaggcattttgccgttgtatgctattaacttg 1236590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 1239335 - 1239290
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| |||||||| |||||||| ||||||| ||||||||||||    
T  1239335 tatcatactatttgtaggcattttgacgttgtatgctattaacttg 1239290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 5333577 - 5333621
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||| |||||||||||||||||||||||  |||||| ||||||||    
T  5333577 ttttgtcatattatttgtatgcattttgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 12184437 - 12184485
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| | ||||||| |||||| |||||| |||||    
T  12184437 ttttatcatattatttgtaggtattttgctgttgtatgctattgacttg 12184485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 12428865 - 12428913
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| | ||||||| |||||| |||||| |||||    
T  12428865 ttttatcatattatttgtaggtattttgctgttgtatgctattgacttg 12428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25191010 - 25190958
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||| |  || || ||||||||||||    
T  25191010 taggttttatcatattatttgtaggcatttttctattttatgctattaacttg 25190958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 27110406 - 27110358
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||  ||||||  ||||||| ||||||||||||    
T  27110406 ttttatcatattatttgtagacattttatcgttgtatgctattaacttg 27110358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 33214613 - 33214565
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||| ||  |||||||||||| || |||||||||||    
T  33214613 gttttatcatattatttttagacattttgccgttttatgctattaactt 33214565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 35283304 - 35283256
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||  |||||  ||||||| ||||||||||||    
T  35283304 ttttatcatattatttgtatatattttatcgttgtatgctattaacttg 35283256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 45445752 - 45445704
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||||  ||| || ||||||||||||    
T  45445752 ttttatcatattatttgtaggcattttgttgttttatgctattaacttg 45445704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 34899551 - 34899502
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34899551 gttttatcatattatttgtatgcattttgccgttgtatgctattaacttg 34899502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 12141251 - 12141203
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12141251 ttttatcatattatttgtatgcattttgccgttgtatgctattaacttg 12141203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39171537 - 39171485
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  39171537 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 39171485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47590455 - 47590507
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  47590455 taggttttatcatattatttgtaggcattttgccgttgtaagctattaacttg 47590507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48061566 - 48061618
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  48061566 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 48061618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8001493 - 8001441
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  8001493 taggttttatcatattatttataggcattttgccgttgtatgctattaacttg 8001441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9450084 - 9450036
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  9450084 taggttttatcatattatttgtaggcattttgccgttgtatgctattaa 9450036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42978754 - 42978806
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  42978754 taggttttatcatattatatgtaggcattttgccgttgtatgctattaacttg 42978806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45349746 - 45349694
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  45349746 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 45349694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48316759 - 48316707
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  48316759 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 48316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 13796873 - 13796824
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  13796873 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 13796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 19404700 - 19404652
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  19404700 ttttatcatattatttgtaggctttttgccgttgcacgctattaacttg 19404652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28044703 - 28044651
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| ||  ||||||||||||||| ||||||||||||    
T  28044703 taggttttatcatattatttttagacattttgccgttgtatgctattaacttg 28044651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 28407861 - 28407813
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  28407861 ttttatcatattatttgtagacattttgccgttgtatgctattaacttg 28407813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37837405 - 37837353
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| ||||| ||||||||||||| || ||||||||||||    
T  37837405 taggttttatcatattacttgtaggcattttgccgttttatgctattaacttg 37837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 40993304 - 40993353
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||| ||||||| | ||||||||||    
T  40993304 gttttatcatattatttgtaggcattttgtcgttgtatgttattaacttg 40993353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 35133099 - 35133143
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||| || |||||||||||||||| ||||||||||||    
T  35133099 atcatattatttctaggcattttgccgttgtatgctattaacttg 35133143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 38798929 - 38798977
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||||||||  || ||||||||||||    
T  38798929 ttttatcatattatttgtaggcattttgccgtcttatgctattaacttg 38798977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 43369697 - 43369649
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| || |||||||||||||||| | ||||||||||    
T  43369697 ttttatcatattatttataggcattttgccgttgtatgatattaacttg 43369649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 48930859 - 48930903
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||    
T  48930859 atcatattatttgttggcattttgccgttgtatgctattaacttg 48930903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 5348534 - 5348487
Alignment:
Q  6 tttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||| ||||||||||||| ||||||| |||||||| ||||||||||||    
T  5348534 tttaccatattatttgtaggcattttaccgttgtatgctattaacttg 5348487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 24069337 - 24069290
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||| |||||||  ||||||| |||||||||||    
T  24069337 ttttatcatattatttgtaggcattttatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 27341698 - 27341745
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||||| |||||||||||| ||||||||||||| || |||||||||||    
T  27341698 ttttataatattatttgtaggcattttgccgttatatgctattaactt 27341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24770390 - 24770444
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttgaa 55  Q
    ||||||||||||||||||| |||  |||||||||||| || | ||||||||||||    
T  24770390 taggttttatcatattattggtagacattttgccgttttatgttattaacttgaa 24770444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 25287129 - 25287083
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaact 51  Q
    |||||||||||||||||||  |||||||| |||||| ||||||||||    
T  25287129 ttttatcatattatttgtagccattttgctgttgtatgctattaact 25287083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 46700183 - 46700229
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaact 51  Q
    |||||||||||||||| || ||||||||||||| || ||||||||||    
T  46700183 ttttatcatattatttataggcattttgccgttatatgctattaact 46700229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 19297017 - 19297062
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||||||||||| ||||||||| ||| || ||||||||    
T  19297017 gttttatcatattatttgtaggcattttgctgttatatgctattaa 19297062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 3398338 - 3398386
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| || ||||||| |||||||| | ||||||||||    
T  3398338 ttttatcatattatttttaggcattttaccgttgtatgttattaacttg 3398386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 9977153 - 9977105
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| ||  ||||||| ||||||| ||||||||||||    
T  9977153 ttttatcatattatttttagacattttgtcgttgtatgctattaacttg 9977105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 17773465 - 17773421
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||||||||||||||| ||||||| | |||||| |||||||||||    
T  17773465 tatcatattatttgtaagcattttactgttgtatgctattaactt 17773421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 22743096 - 22743136
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||  |||||||||||||||| ||||||||    
T  22743096 atcatattatttgttggcattttgccgttgtatgctattaa 22743136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 35665078 - 35665030
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |  |||||||| ||||||| ||||||||||||    
T  35665078 ttttatcatattattttttggcattttgtcgttgtatgctattaacttg 35665030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 41553377 - 41553329
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||| |||| || | |||||||||||||| ||||||||||||    
T  41553377 ttttatcatatcatttatacgtattttgccgttgtatgctattaacttg 41553329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 46822685 - 46822638
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||| | ||||| ||||||||||||    
T  46822685 ttttatcatattatttgta-gcattttgtcattgtatgctattaacttg 46822638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 33585680 - 33585631
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33585680 gttttatcatattatttgtatgcattttgccgttgtatgctattaacttg 33585631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7646633 - 7646682
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  7646633 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 7646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1421828 - 1421880
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  1421828 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 1421880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7677821 - 7677769
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  7677821 taggttttatcatattatttttaggcattttgccgttgtatgctattaacttg 7677769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18763620 - 18763672
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  18763620 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 18763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31788608 - 31788660
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  31788608 taggttttaacatattatttgtaggcattttgccgttgtatgctattaacttg 31788660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36692026 - 36692078
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  36692026 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 36692078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43397066 - 43397014
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  43397066 taggttttatcatattatttgtacgcattttgccgttttatgctattaacttg 43397014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 9169200 - 9169154
Alignment:
Q  7 ttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9169200 ttatcatattatttgtaggcattttgccgttgtatgctattaacttg 9169154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 4100491 - 4100540
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  4100491 gttttatcatattatttgtaggcattttgccgttgtatgatattaacttg 4100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 32448557 - 32448512
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaacttg 32448512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11985181 - 11985129
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||| ||||||  |||||||||||    
T  11985181 taggttttatcatattatttgtaggcattttgctgttgtatcctattaacttg 11985129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12554129 - 12554077
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||| ||||||| | ||||||||||    
T  12554129 taggttttatcatattatttgtaggcattttgtcgttgtatgatattaacttg 12554077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 23933563 - 23933515
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  23933563 ttttatcatattatttgtaggaattttgccgttgtaagctattaacttg 23933515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 37876550 - 37876502
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  37876550 ttttatcatattatttgtaggcattttgccgtcgtatgctattaacttg 37876502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 29279514 - 29279468
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaact 51  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||||    
T  29279514 ttttatcatattatttgtaggcattttgccgttttatgctattaact 29279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 33760135 - 33760089
Alignment:
Q  7 ttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  33760135 ttatcatattatttgtaggcattttgctgttgtaagctattaacttg 33760089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4778908 - 4778953
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||    
T  4778908 gttttatcatattatttgtaggcattttgccgttgtatgttattaa 4778953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 17249088 - 17249043
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||    
T  17249088 tatcatattatttgtagacattttgccgttgtatgctattaacttg 17249043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 27097352 - 27097303
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| | ||||||||||||||  |||||||||||    
T  27097352 gttttatcatattatttgtaggaattttgccgttgtatactattaacttg 27097303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 28533898 - 28533849
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||||||||||| | |||||| ||||||| |||||||||||||    
T  28533898 ttttatcatattatttgtaggtattttgtcgttgtatgctattaacttga 28533849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 3309105 - 3309149
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||    
T  3309105 atcatattatttgtagtcattttgccgttgtatgctattaacttg 3309149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 4904089 - 4904041
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||  ||||||| ||||||| ||||||||||||    
T  4904089 ttttatcatattatttgtagacattttgtcgttgtatgctattaacttg 4904041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5427817 - 5427765
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| | |||||||  ||||||| ||||||||||||    
T  5427817 taggttttatcatattatttgcaagcattttatcgttgtatgctattaacttg 5427765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 6358825 - 6358777
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| | |||||| ||||||| ||||||||||||    
T  6358825 ttttatcatattatttgtacgtattttgtcgttgtatgctattaacttg 6358777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 10237156 - 10237112
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||    
T  10237156 atcatattatttgtaggcattttgtcgttgtatgctattaacttg 10237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 19597996 - 19598044
Alignment:
Q  6 tttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||||||||||  |||||| |||||||| |||||||||||||    
T  19597996 tttatcatattatttgtagacattttaccgttgtatgctattaacttga 19598044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 25509012 - 25508964
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| ||||||||||| |||||||||||||||| | ||||||||||    
T  25509012 ttttatcgtattatttgtaggcattttgccgttgtatgttattaacttg 25508964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37994440 - 37994488
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||||| ||| || ||||||||||||    
T  37994440 ttttatcatattatttgtaggcattttgctgttatatgctattaacttg 37994488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 38445321 - 38445369
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||||||||||||||||||| |||||||||| ||||| | |||||||||    
T  38445321 gttttatcatattatttgtaggcattttgccattgtatgttattaactt 38445369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 31210555 - 31210521
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccg 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  31210555 taggttttatcatattatttgtaggcattttgccg 31210521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1415709 - 1415761
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||| |||||||||| ||||||| |||||  | ||||||||||||    
T  1415709 taggttttatcagattatttgtaggcattttaccgtttaatgctattaacttg 1415761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12677398 - 12677347
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||| ||||||| ||||| || ||||||||||||    
T  12677398 taggttttatcatattatt-gtaggcatttttccgttttatgctattaacttg 12677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 19062279 - 19062243
Alignment:
Q  17 atttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  19062279 atttgtaggcattttgccgttgtatgctattaacttg 19062243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 31128724 - 31128692
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgtt 37  Q
    ||||||||||||||||||| |||||||||||||    
T  31128724 ttttatcatattatttgtaggcattttgccgtt 31128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33923857 - 33923909
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| | || ||||| |||| || ||||||||||||    
T  33923857 taggttttatcatattatttgcaggcgttttgtcgttttatgctattaacttg 33923909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37416866 - 37416914
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||  ||||||||||||||| | | ||||||||    
T  37416866 ttttatcatattatttgtagacattttgccgttgtatgttgttaacttg 37416914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 41327898 - 41327942
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||||||||||||||| |||||||| | ||||| |||||||||||    
T  41327898 tatcatattatttgtaggcattttggcattgtatgctattaactt 41327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24229731 - 24229679
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  24229731 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 24229679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38597938 - 38597990
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  38597938 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 38597990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 13007373 - 13007422
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  13007373 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 13007422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 26825574 - 26825623
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  26825574 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 26825623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14082343 - 14082292
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  14082343 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaactt 14082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9113669 - 9113620
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  9113669 gttttatcatattatttgtaggcatttttccgttgtatgctattaacttg 9113620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 25980301 - 25980350
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  25980301 gttttatcatattatttgtaggcattttgccgttatatgctattaacttg 25980350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8096445 - 8096393
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||| || || ||||||||||||    
T  8096445 taggttttatcatattatttgtaggcattttgccattttatgctattaacttg 8096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 8088152 - 8088107
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||||    
T  8088152 tatcatattatttgtaggcattttgcctttgtatgctattaacttg 8088107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34945537 - 34945586
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| || |||||||| ||||||| ||||||||||||    
T  34945537 gttttatcatattatttataggcattttgtcgttgtatgctattaacttg 34945586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 2979245 - 2979201
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  2979245 atcatattatttgtaggcattgtgccgttgtatgctattaacttg 2979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11976882 - 11976830
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||| ||||| || | ||||||||||    
T  11976882 taggttttatcatattatttgtaggcattttcccgttttatgttattaacttg 11976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31391700 - 31391648
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||| |||| ||||||| | |||||| ||||||||||||    
T  31391700 taggttttatcatattatatgtaggcatttttctgttgtatgctattaacttg 31391648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35850940 - 35850992
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| | ||| ||||||||| || ||||||||||||    
T  35850940 taggttttatcatattatttgcaggcactttgccgttttatgctattaacttg 35850992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38007499 - 38007550
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||| || || ||||||||||||    
T  38007499 taggttttatcatattatttgtaggcattttgcc-ttttatgctattaacttg 38007550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7930318 - 7930357
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgta 40  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  7930318 taggttttatcatattatttgtaggcattttgtcgttgta 7930357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 41630647 - 41630694
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||||||||||||||||||  ||||||| ||||||| |||||||||||    
T  41630647 ttttatcatattatttgtagacattttgtcgttgtatgctattaactt 41630694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 10722906 - 10722955
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||||||||||| ||||||| ||| |||| | |||||||||||    
T  10722906 ttttatcatattatttgtaggcatttttccgctgtatgttattaacttga 10722955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 37986055 - 37986006
Alignment:
Q  6 tttatcatattatttgtatgcattttgccgttgtacgctattaacttgaa 55  Q
    ||||||| ||||||||||  ||||||| ||||||| ||||||||||||||    
T  37986055 tttatcacattatttgtagacattttgtcgttgtatgctattaacttgaa 37986006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 13422078 - 13422126
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||| |||| ||||||| ||||| || ||||||||||||    
T  13422078 ttttatcatattatatgtaggcatttttccgttttatgctattaacttg 13422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 14211376 - 14211420
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| ||||||| | |||||| ||||||||||||    
T  14211376 atcatattatttgtaggcatttttctgttgtatgctattaacttg 14211420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14726408 - 14726372
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgtt 37  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  14726408 taggttttatcatattatttgtaggcattttgtcgtt 14726372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 28540845 - 28540801
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||  |||||| |||||||| ||||||||||||    
T  28540845 atcatattatttgtagacatttttccgttgtatgctattaacttg 28540801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 35920939 - 35920895
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||||||| |||||||| | ||||| ||||||||    
T  35920939 ttttatcatattatttgtaggcattttgtcattgtatgctattaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21533756 - 21533704
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  21533756 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 21533704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38860059 - 38860007
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  38860059 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 38860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45568392 - 45568340
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  45568392 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 45568340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 4711626 - 4711675
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  4711626 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 4711675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 9998611 - 9998660
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9998611 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 9998660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 10108380 - 10108429
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  10108380 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 10108429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 10229620 - 10229669
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  10229620 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 10229669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 10233214 - 10233263
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  10233214 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 10233263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 48650678 - 48650629
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  48650678 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 48650629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33580021 - 33580073
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  33580021 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 33580073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38545940 - 38545992
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  38545940 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 38545992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43017029 - 43017080
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  43017029 taggtgttatcatattatttgtaggcattttgccgttgtatgctattaactt 43017080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12050595 - 12050541
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttgaa 55  Q
    ||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||    
T  12050595 taggttttatcatattatttgtaagcattttgtcgttgtatgttattaacttgaa 12050541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 19619858 - 19619904
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaact 51  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  19619858 ttttatcatattatttgtaggcattttgccgttgtatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 6954640 - 6954591
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  6954640 gttttatcaaattatttgtaggcattttgccgttgtatgctattaacttg 6954591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 8914861 - 8914906
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  8914861 atcatattatttgtaggcattttgccgttgtatgctattaacttga 8914906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9797478 - 9797429
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  9797478 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 9797429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 21431757 - 21431806
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  21431757 gttttatcatattatttgtaggcattttgccgttgtatgatattaacttg 21431806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 26739300 - 26739251
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  26739300 ttttatcatattatttgtaagcattttggcgttgtatgctattaacttga 26739251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 44959917 - 44959868
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  44959917 gttttatcatattatttgtaggcattttgccattgtatgctattaacttg 44959868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46304467 - 46304414
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||||||||| |||| |||| ||||||||||| |||||||||||||    
T  46304467 taggttttatcatattatatgtaggcatgttgccgttgtatgctattaacttga 46304414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 52923061 - 52923012
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  52923061 gttttatcatattatttgtaggcattttaccgttgtatgctattaacttg 52923012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 53807798 - 53807753
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  53807798 tatcatattatttgtaggcattttgccgttgtatgctattaacttg 53807753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 7546764 - 7546808
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  7546764 atcatattatttgtaggcattttgccgttgtatgctattaacttg 7546808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 20987698 - 20987650
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  20987698 ttttatcatattatttgtaggcattttgcagttgtatgctattaacttg 20987650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 21289753 - 21289709
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  21289753 atcatattatttgtaggcattttgccgttgtatgctattaacttg 21289709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 21313181 - 21313229
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  21313181 ttttatcatattatttgtagccattttgccgttgtatgctattaacttg 21313229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 23799853 - 23799805
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  23799853 ttttatcatattatttgtaggcattttgccgttgtatgttattaacttg 23799805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 29922202 - 29922250
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  29922202 ttttatcatattgtttgtaggcattttgccgttgtatgctattaacttg 29922250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 29971355 - 29971403
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  29971355 ttttatcatattgtttgtaggcattttgccgttgtatgctattaacttg 29971403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40487466 - 40487518
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || | ||||||||||    
T  40487466 taggttttatcatattatttgtaggcattttgccgttatatgttattaacttg 40487518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 51303582 - 51303538
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  51303582 atcatattatttgtaggcattttgccgttgtatgctattaacttg 51303538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 51923876 - 51923920
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  51923876 atcatattatttgtaggcattttgccgttgtatgctattaacttg 51923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 7792130 - 7792083
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  7792130 ttttatcatattatttgtaggcattttgccattgtaagctattaactt 7792083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 40556846 - 40556888
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctat 46  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  40556846 gttttatcatattatttgtaggcattttgccgttgtatgctat 40556888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 628863 - 628818
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||    
T  628863 tatcatattatttgtaggcattttgccgttgtattctattaacttg 628818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47896293 - 47896345
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||    
T  47896293 taggttttatcttattatttgta-gcattttgtcgttgtatgctattaacttga 47896345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 3085240 - 3085200
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  3085240 atcatattatttgtaggcattttgccgttgtaggctattaa 3085200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 20464913 - 20464865
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||| ||||||||| ||| ||| ||||||||||||    
T  20464913 ttttatcatattatttgtgtgcattttgtcgtcgtatgctattaacttg 20464865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 27706165 - 27706121
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||    
T  27706165 atcatattatttgtaggcattttgtcgttgtatgctattaacttg 27706121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 27856310 - 27856358
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||| |||||| | ||||||||||||    
T  27856310 ttttatcatattatttgtaggcatttttccgttgcatgctattaacttg 27856358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 42460894 - 42460942
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||||  |||||| ||||||||||||    
T  42460894 ttttatcatattatttgtaggcattttgttgttgtatgctattaacttg 42460942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43488537 - 43488489
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||||||||||| || || ||||||||||||| ||||||||    
T  43488537 taggttttatcatattatttttaggctttttgccgttgtatgctattaa 43488489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9173897 - 9173940
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||| |||||||||||||||| | |||||||||    
T  9173897 atcatattatttgtaggcattttgccgttgtatgttattaactt 9173940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 26275762 - 26275715
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||| |||||||| | ||||| |||||||||||    
T  26275762 ttttatcatattatttgtaggcattttgtcattgtatgctattaactt 26275715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 12149728 - 12149683
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||||| | ||| |||||||||||||||| ||||||||    
T  12149728 gttttatcatattaatcgtaggcattttgccgttgtatgctattaa 12149683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 32701635 - 32701684
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| ||||||| |||| |||||||||||||||| ||||| ||||||    
T  32701635 gttttatgatattatctgtaggcattttgccgttgtatgctatgaacttg 32701684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 54149136 - 54149181
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaac 50  Q
    ||||||||||||||||||| ||||| || ||||||| |||||||||    
T  54149136 ttttatcatattatttgtaggcattatgtcgttgtatgctattaac 54149181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 7448858 - 7448810
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||| |||||||||||||||  |||||||||| |||| |||||||||||    
T  7448858 gtttcatcatattatttgtagacattttgccgctgtatgctattaactt 7448810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 7457000 - 7456952
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    |||| |||||||||||||||  |||||||||| |||| |||||||||||    
T  7457000 gtttcatcatattatttgtagacattttgccgctgtatgctattaactt 7456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 16235575 - 16235619
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||| ||||| |||||||| ||||||| ||||||||||||    
T  16235575 atcatattacttgtaggcattttgtcgttgtatgctattaacttg 16235619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19339320 - 19339368
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||| |||| |||||||| ||||||| | ||||||||||    
T  19339320 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 19339368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44805174 - 44805222
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||| |||||| |||||||| | ||||| ||||||||||||    
T  44805174 ttttatcatattgtttgtaggcattttgtcattgtatgctattaacttg 44805222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 46220808 - 46220852
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||||||| ||||||| |||||||| || |||||    
T  46220808 ttttatcatattatttgtaggcattttaccgttgtatgccattaa 46220852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 50194274 - 50194230
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||| |||||| ||||||||||||| || ||||||||||||    
T  50194274 atcatattttttgtaggcattttgccgttatatgctattaacttg 50194230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14872784 - 14872836
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  14872784 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 14872836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 35484336 - 35484286
Alignment:
Q  3 ggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  35484336 ggttttatcatattatttgtaagcattttgccgttgtatgctattaacttg 35484286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7836743 - 7836691
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  7836743 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 7836691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16989516 - 16989568
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  16989516 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 16989568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34878225 - 34878173
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  34878225 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 34878173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 19596405 - 19596355
Alignment:
Q  3 ggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  19596405 ggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 19596355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4413259 - 4413312
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||| ||||    
T  4413259 taggttttatcatattatttgtaggcattttgctgttgtatgctattaaattga 4413312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 5983984 - 5984033
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  5983984 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 5984033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15492436 - 15492481
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaac 50  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||    
T  15492436 ttttatcatattatttgtatgcattttaccgttgtatgctattaac 15492481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 19061061 - 19061106
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  19061061 tatcatattatttgtaggcattttgccgttgtatgctattaacttg 19061106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 24583298 - 24583343
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaacttg 24583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3228414 - 3228466
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || | ||||||||||    
T  3228414 taggttttatcatattatttgtaggcattttgccgttatatgttattaacttg 3228466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31984306 - 31984358
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| || |||||||| ||||||| ||||||||||||    
T  31984306 taggttttatcatattatttttaagcattttgtcgttgtatgctattaacttg 31984358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 36775649 - 36775605
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  36775649 atcatattatttgtaggcattttgccgttgtatgctattaacttg 36775605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 48750338 - 48750382
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  48750338 atcatattatttgtaggcattttgccgttgtatgctattaacttg 48750382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45415703 - 45415742
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgta 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  45415703 taggttttatcatattatttgtaggcattttgccgttgta 45415742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 7337608 - 7337558
Alignment:
Q  3 ggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| ||||||||| |||| | ||||||||||||    
T  7337608 ggttttatcatattatttgtaggcattttgctgttgcatgctattaacttg 7337558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 31919136 - 31919186
Alignment:
Q  3 ggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||||  ||||||| ||||||| ||||||||||||    
T  31919136 ggttttatcatattatttgtagacattttgtcgttgtatgctattaacttg 31919186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 11462426 - 11462377
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| | |||||| ||||||| ||||||||||||    
T  11462426 gttttatcatattatttgtaggaattttgtcgttgtatgctattaacttg 11462377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 21947562 - 21947513
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  21947562 gttttatcatattatttgtaggcattttgccgttgtattttattaacttg 21947513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 24583102 - 24583147
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||    
T  24583102 tatcatattatttgtaggcattttgccgttgtatgatattaacttg 24583147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 32395146 - 32395195
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| || ||||||||||| |||| ||||||||||||    
T  32395146 gttttatcatattatttataggcattttgccgctgtatgctattaacttg 32395195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 44543424 - 44543469
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| ||||||||||||| || ||||||||||||    
T  44543424 tatcatattatttgtaggcattttgccgttttatgctattaacttg 44543469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 44915788 - 44915829
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctat 46  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  44915788 ttttatcatattatttgtaggcattttgccgttgtatgctat 44915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 6217766 - 6217718
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| | ||||| |||||||| ||||||||||||    
T  6217766 ttttatcatattatttgtaggtattttaccgttgtatgctattaacttg 6217718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10776408 - 10776356
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||| ||||||||| ||||||||| ||||||  |||||||||||    
T  10776408 taggttttatcattttatttgtaggcattttgctgttgtattctattaacttg 10776356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23291589 - 23291537
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| | | ||||||||||| || ||||||||||||    
T  23291589 taggttttatcatattatttggaggtattttgccgttttatgctattaacttg 23291537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 51373801 - 51373753
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||| ||| ||| ||||||||||||    
T  51373801 ttttatcatattatttgtaggcattttgtcgtcgtatgctattaacttg 51373753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 16161977 - 16162024
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||| |||||||||||| | | |||||||||||    
T  16161977 ttttatcatattatttgtaggcattttgccgtggaatgctattaactt 16162024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 5856058 - 5856108
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttgaa 55  Q
    ||||| |||||||||||||   |||||||||||||| ||||||||||||||    
T  5856058 ttttaccatattatttgtagaaattttgccgttgtatgctattaacttgaa 5856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 16263010 - 16263055
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaac 50  Q
    ||||||||| ||||| ||||||||||||||||| || |||||||||    
T  16263010 ttttatcatgttattcgtatgcattttgccgttttatgctattaac 16263055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 13144755 - 13144707
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||| |||||||| |||||||||| || || ||||||||||||    
T  13144755 ttttatcataatatttgtaggcattttgccattttatgctattaacttg 13144707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 19052257 - 19052221
Alignment:
Q  5 ttttatcatattatttgtatgca-ttttgccgttgta 40  Q
    ||||||||||||||||||||||| |||||||||||||    
T  19052257 ttttatcatattatttgtatgcatttttgccgttgta 19052221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21687523 - 21687571
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||||||||||| |||||||  |||| || ||||||||    
T  21687523 taggttttatcatattatttgtaggcattttctcgttttatgctattaa 21687571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29738611 - 29738559
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||| |||||||||||||| |  |||||| ||||||||| ||||||||||||    
T  29738611 taggtgttatcatattatttattggcatttggccgttgtatgctattaacttg 29738559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 34413031 - 34412987
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| ||||||||| |||||| | ||||||||||    
T  34413031 atcatattatttgtaggcattttgcggttgtatgttattaacttg 34412987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 47133056 - 47133100
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||| |||||| ||||||||||||| || ||||||||||||    
T  47133056 atcatattttttgtaggcattttgccgttatatgctattaacttg 47133100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 71814 - 71765
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  71814 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 71765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 33053112 - 33053063
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  33053112 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 33053063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3913521 - 3913469
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  3913521 taggttttatcatattatttgtaggcattttgccattgtatgctattaacttg 3913469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 67945 - 67896
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  67945 gttttatcatattatttataggcattttgccgttgtatgctattaacttg 67896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 606350 - 606399
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  606350 gttttatcatattatttgtaggcattttgccattgtatgctattaacttg 606399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 23128764 - 23128809
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||    
T  23128764 gttttatcatattatttgtaggcattttgccgttgtatgctattaa 23128809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 546182 - 546226
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  546182 atcatattatttgtaggcattttgccgttgtatgctattaacttg 546226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12170611 - 12170663
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  12170611 taggtttgatcatattatttgtaggcattttgctgttgtatgctattaacttg 12170663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 14801978 - 14802022
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  14801978 atcatattatttgtaggcattttgccgttgtatgctattaacttg 14802022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14846168 - 14846116
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||| ||| || ||||||||||||    
T  14846168 taggttttatcatattatttgtaggcattttgctgttttatgctattaacttg 14846116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 30608458 - 30608410
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  30608458 ttttatcatattatttgtaggcattttaccgttgtatgctattaacttg 30608410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 20225999 - 20226046
Alignment:
Q  6 tttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  20225999 tttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 20226046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 22119983 - 22120030
Alignment:
Q  6 tttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  22119983 tttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 22120030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 127816 - 127862
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  127816 ttttatcatattatttgtaggcattttgccgttgt--gctattaacttg 127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9341595 - 9341546
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||| |||||| |||||||| ||||||| ||||||||||||    
T  9341595 gttttatcatattgtttgtaggcattttgtcgttgtatgctattaacttg 9341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7515149 - 7515097
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||| | | |||| ||||||||||||    
T  7515149 taggttttatcatattatttgtaggcatttttctgctgtatgctattaacttg 7515097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 9380170 - 9380218
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||||||||||| |||||||  |||||| ||||    
T  9380170 ttttatcatattatttgtatgcattttgtcgttgtattctattatcttg 9380218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 30776810 - 30776858
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||||||| | | ||||||||||||    
T  30776810 ttttatcatattatttgtaggcattttgccgtggaatgctattaacttg 30776858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30894742 - 30894794
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||||||  |||||||| |||||| ||||| ||||||    
T  30894742 taggttttatcatattatttgtagtcattttgctgttgtatgctatcaacttg 30894794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 32327164 - 32327129
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgt 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  32327164 taggttttatcatattatttgtaggcattttgccgt 32327129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 14175015 - 14174965
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||||||||||| ||||||| ||||| || ||| |||||||||    
T  14175015 gttttatcatattatttgtaggcatttttccgttttatgctgttaacttga 14174965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 14179551 - 14179501
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||||||||||| ||||||| ||||| || ||| |||||||||    
T  14179551 gttttatcatattatttgtaggcatttttccgttttatgctgttaacttga 14179501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 29319822 - 29319772
Alignment:
Q  4 gttttatcatattattt-gtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| ||| ||||||| |||||||| ||||||||||||    
T  29319822 gttttatcatattattttgtaagcattttaccgttgtatgctattaacttg 29319772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 21426622 - 21426581
Alignment:
Q  12 atattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||  ||||||||||||||| ||||||||||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttg 21426581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 30493679 - 30493724
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaac 50  Q
    ||||||||| || |||||| |||||||||||||||| |||||||||    
T  30493679 ttttatcatgttgtttgtaggcattttgccgttgtatgctattaac 30493724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 528293 - 528249
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||||||| | |||||| ||||||| ||||||||    
T  528293 ttttatcatattatttgtaggtattttgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 1523555 - 1523603
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||| ||| | | ||||||||||||    
T  1523555 ttttatcatattatttgtaggcattttgtcgtggaatgctattaacttg 1523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 1704072 - 1704028
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||| ||  ||||||| |||||||||||||||||||    
T  1704072 tatcatattatttatagacattttgtcgttgtacgctattaactt 1704028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 8102873 - 8102921
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||||||| | | | ||||||||||    
T  8102873 ttttatcatattatttgtaggcattttgccgtggaatgttattaacttg 8102921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 29255389 - 29255341
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| ||||||  | |||||| ||||||||||||    
T  29255389 ttttatcatattatttgtaggcatttcactgttgtatgctattaacttg 29255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 31296967 - 31297011
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||| |||||| |||||||| ||||||| ||||||||    
T  31296967 ttttatcatattgtttgtaggcattttgtcgttgtatgctattaa 31297011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1486 - 1538
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  1486 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttg 1538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15634 - 15686
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  15634 taggttttatcatattatttgtaggcattttgccgttatatgctattaacttg 15686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 56040593 - 56040541
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  56040593 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 56040541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 9178517 - 9178567
Alignment:
Q  3 ggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  9178517 ggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 9178567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19853456 - 19853407
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  19853456 gttttatcatattatttctaggcattttgccgttgtatgctattaacttg 19853407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 47320352 - 47320307
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  47320352 tatcatattatttgtaggcattttgccgttgtatgctattaacttg 47320307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 48257576 - 48257527
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  48257576 gttttatcatattatttgtaggtattttgccgttgtatgctattaacttg 48257527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 53811193 - 53811242
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  53811193 gttttatcatattatttgtaggcattttggcgttgtatgctattaacttg 53811242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 2520945 - 2520993
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  2520945 ttttatcgtattatttgtaggcattttgccgttgtatgctattaacttg 2520993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10496497 - 10496549
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||| || ||| ||||||||||||    
T  10496497 taggttttatcatattatttgtaggcattttgctgtcgtatgctattaacttg 10496549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21686189 - 21686137
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||||| |||| | ||||||||||    
T  21686189 taggttttatcatattatttgtaggcattttgccgctgtatgttattaacttg 21686137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24099014 - 24098963
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||||    
T  24099014 taggttttatcatattatttgtaggcattttgccgttg-atgctattaacttg 24098963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35348469 - 35348521
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| |||||||||| || || ||||||||||||    
T  35348469 taggttttatcatattatttgtaggcattttgccattttatgctattaacttg 35348521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 36194878 - 36194922
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  36194878 atcatattatttgtaggcattttgccgttgtatgctattaacttg 36194922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37465648 - 37465696
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  37465648 ttttatcatattatttgtaagcattttgtcgttgtatgctattaacttg 37465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 22305564 - 22305514
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttgaa 55  Q
    ||||||||||||||||||| | |||||| ||||||| ||||||||||||||    
T  22305564 ttttatcatattatttgtaggtattttgtcgttgtatgctattaacttgaa 22305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 29120322 - 29120276
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaact 51  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  29120322 ttttatcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 6155163 - 6155118
Alignment:
Q  8 tatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||    
T  6155163 tatcatattatttgtaggcattttgtcgttgtatgctattaacttg 6155118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 22611348 - 22611393
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||    
T  22611348 gttttatcatattatttgtaggcattttgccgttgtatggtattaa 22611393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 27652113 - 27652158
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||    
T  27652113 atcatattatttgtagacattttgccgttgtatgctattaacttga 27652158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 31891223 - 31891182
Alignment:
Q  12 atattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  31891223 atattatttgtaggcattttgccgttgtatgctattaacttg 31891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 32766679 - 32766728
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| ||||| || ||||||| ||||||||||||    
T  32766679 gttttatcatattatttgtaggcattatgtcgttgtatgctattaacttg 32766728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 45418678 - 45418723
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaac 50  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||    
T  45418678 ttttatcatattatttgtaggcattttgtcgttgtatgctattaac 45418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13634277 - 13634329
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||| |||||||||||   |||||||||||||| ||||||||||||    
T  13634277 taggttttatcttattatttgtagttattttgccgttgtatgctattaacttg 13634329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 29960892 - 29960844
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||| |||||||| |||||||||||||||| ||| ||||||||    
T  29960892 ttttatcatactatttgtaggcattttgccgttgtatgcttttaacttg 29960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 42032470 - 42032422
Alignment:
Q  7 ttatcatattatttgtatgcattttgccgttgtacgctattaacttgaa 55  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  42032470 ttatcatattattggtagccattttgccgttgtatgctattaacttgaa 42032422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 7008932 - 7008885
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||||    
T  7008932 ttttatcatattatttgtggacattttgccgttgtatgctattaactt 7008885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21662599 - 21662652
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||||||||||||||  || ||||  |||||| |||||||||||||    
T  21662599 taggttttatcatattatttgtagacactttggtgttgtatgctattaacttga 21662652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21671363 - 21671416
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||||||||||||||  || ||||  |||||| |||||||||||||    
T  21671363 taggttttatcatattatttgtagacactttggtgttgtatgctattaacttga 21671416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 43510361 - 43510410
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||| ||||||| |  |||||||||    
T  43510361 gttttatcatattatttgtaggcattttgtcgttgtatgtcattaacttg 43510410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 2069523 - 2069491
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgtt 37  Q
    ||||||||||||||||||||||||||| |||||    
T  2069523 ttttatcatattatttgtatgcattttaccgtt 2069491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 4142696 - 4142660
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgta 40  Q
    ||||||||||||||||||||  |||||||||||||||    
T  4142696 gttttatcatattatttgtagacattttgccgttgta 4142660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17949271 - 17949219
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||| |||||||||||||   ||||| | ||||||||||    
T  17949271 taggttttatcatattatatgtatgcattttgttcttgtatgttattaacttg 17949219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17953123 - 17953071
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||| |||||||||||||   ||||| | ||||||||||    
T  17953123 taggttttatcatattatatgtatgcattttgttcttgtatgttattaacttg 17953071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 18935952 - 18935996
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||| |||||||||  ||||||| ||||||||||    
T  18935952 atcatattatttgtaggcattttgctattgtacgttattaacttg 18935996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 21554733 - 21554685
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||| ||||||||||| |||||||||| ||||  ||||||||||||    
T  21554733 ttttatcttattatttgtaggcattttgcccttgtttgctattaacttg 21554685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 35395591 - 35395551
Alignment:
Q  12 atattatttgtatgcattttgccgttgtacgctattaactt 52  Q
    ||||||||||||||||||||| ||| ||| |||||||||||    
T  35395591 atattatttgtatgcattttgtcgtcgtatgctattaactt 35395551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36184697 - 36184745
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||| ||||| || |||||||| ||||||| ||||||||||||    
T  36184697 ttttatcatactatttctaggcattttgtcgttgtatgctattaacttg 36184745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44596826 - 44596874
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||   ||||| |||||||| ||||||||||||    
T  44596826 ttttatcatattatttgtagctattttaccgttgtatgctattaacttg 44596874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53444280 - 53444332
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||||||   ||||| ||||| || ||||||||||||    
T  53444280 taggttttatcatattatttgtagatatttttccgttttatgctattaacttg 53444332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 65986 - 65936
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  65986 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttga 65936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 50921 - 50970
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  50921 gttttatcatattatttgtaggcattttgccattgtatgctattaacttg 50970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1920 - 1868
Alignment:
Q  1 taggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||| ||||||||| |||||| | ||||||||||    
T  1920 taggttttatcatattatttgtaggcattttgctgttgtatgttattaacttg 1868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 19025 - 18981
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    ||||||||||||||||||||||||||||||||||||  |||||||    
T  19025 ttttatcatattatttgtatgcattttgccgttgtatactattaa 18981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 14813 - 14766
Alignment:
Q  6 tttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||||||||||  || || ||||||||||||    
T  14813 tttatcatattatttgtatgcattttgctattatatgctattaacttg 14766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 9987 - 9937
Alignment:
Q  3 ggttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    ||||||||||||||||||||| ||||||| ||||| || |||||| |||||    
T  9987 ggttttatcatattatttgtaggcatttttccgttttatgctattgacttg 9937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8657 - 8702
Alignment:
Q  4 gttttatcatattatttgtatgcattttgccgttgtacgctattaa 49  Q
    |||||||||||||| | ||| |||||||||||||||| ||||||||    
T  8657 gttttatcatattaatcgtaggcattttgccgttgtatgctattaa 8702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 32690 - 32641
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttga 54  Q
    ||||||||||||||||||| |||||||| || ||||  ||||||||||||    
T  32690 ttttatcatattatttgtaggcattttgtcgctgtatactattaacttga 32641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 71243 - 71195
Alignment:
Q  5 ttttatcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||| |||||||||||| ||||||||  |||||| ||||||||||||    
T  71243 ttttattatattatttgtaggcattttgttgttgtatgctattaacttg 71195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 58027 - 57983
Alignment:
Q  9 atcatattatttgtatgcattttgccgttgtacgctattaacttg 53  Q
    |||||||| |||||| ||||||||||||| || ||||||||||||    
T  58027 atcatattttttgtaggcattttgccgttatatgctattaacttg 57983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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