View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6962_high_20 (Length: 304)

Name: NF6962_high_20
Description: NF6962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6962_high_20
NF6962_high_20
[»] chr2 (30 HSPs)
chr2 (1-304)||(387077-387380)
chr2 (1-253)||(39338740-39338992)
chr2 (5-253)||(10524051-10524302)
chr2 (1-221)||(7874278-7874496)
chr2 (1-226)||(14106398-14106623)
chr2 (1-209)||(14405197-14405403)
chr2 (24-201)||(5254263-5254438)
chr2 (93-196)||(4471935-4472035)
chr2 (86-208)||(10173539-10173659)
chr2 (124-201)||(1269490-1269567)
chr2 (102-196)||(22885111-22885202)
chr2 (126-201)||(16959989-16960064)
chr2 (62-209)||(37770580-37770723)
chr2 (124-197)||(2062900-2062973)
chr2 (124-196)||(13337286-13337358)
chr2 (124-196)||(15126407-15126479)
chr2 (1-171)||(17116754-17116923)
chr2 (133-196)||(36276178-36276240)
chr2 (124-186)||(7695985-7696047)
chr2 (159-196)||(4162052-4162089)
chr2 (76-187)||(16952334-16952443)
chr2 (76-187)||(17022999-17023108)
chr2 (76-187)||(17060305-17060414)
chr2 (149-209)||(23650384-23650444)
chr2 (156-196)||(27739987-27740027)
chr2 (148-196)||(33788653-33788701)
chr2 (122-193)||(18681080-18681151)
chr2 (1-43)||(7460839-7460881)
chr2 (94-187)||(17079190-17079281)
chr2 (124-190)||(34230219-34230285)
[»] chr3 (33 HSPs)
chr3 (1-221)||(19176489-19176710)
chr3 (1-211)||(43012372-43012581)
chr3 (3-252)||(2392383-2392632)
chr3 (1-221)||(40023448-40023666)
chr3 (1-253)||(20611737-20611988)
chr3 (1-221)||(9583929-9584147)
chr3 (1-226)||(23328226-23328449)
chr3 (1-226)||(45163835-45164061)
chr3 (1-196)||(17550969-17551158)
chr3 (20-252)||(34475648-34475880)
chr3 (64-226)||(45398778-45398939)
chr3 (1-177)||(47235729-47235904)
chr3 (20-212)||(31482880-31483071)
chr3 (3-252)||(2394147-2394379)
chr3 (1-161)||(53247947-53248107)
chr3 (148-201)||(14755286-14755339)
chr3 (124-201)||(47945713-47945790)
chr3 (6-140)||(21342603-21342735)
chr3 (75-196)||(33143899-33144018)
chr3 (124-193)||(37123397-37123466)
chr3 (124-193)||(39021273-39021342)
chr3 (124-220)||(1652883-1652979)
chr3 (157-201)||(14879442-14879486)
chr3 (139-209)||(14193939-14194009)
chr3 (139-196)||(30127274-30127332)
chr3 (139-196)||(5556582-5556639)
chr3 (159-196)||(20710740-20710777)
chr3 (9-43)||(30352322-30352356)
chr3 (139-196)||(2782081-2782138)
chr3 (124-193)||(30935387-30935456)
chr3 (126-190)||(823434-823498)
chr3 (160-196)||(24099360-24099396)
chr3 (140-196)||(31424248-31424304)
[»] chr7 (37 HSPs)
chr7 (1-253)||(38306215-38306467)
chr7 (1-250)||(3867073-3867322)
chr7 (4-254)||(5860166-5860416)
chr7 (1-253)||(47325760-47326012)
chr7 (1-246)||(33435070-33435315)
chr7 (1-253)||(41089623-41089875)
chr7 (4-253)||(3419533-3419783)
chr7 (1-216)||(34389954-34390167)
chr7 (24-226)||(35745721-35745926)
chr7 (1-226)||(37794971-37795195)
chr7 (70-226)||(6584891-6585046)
chr7 (8-253)||(10244136-10244381)
chr7 (4-186)||(44353442-44353623)
chr7 (65-184)||(48161964-48162083)
chr7 (9-252)||(25160770-25161011)
chr7 (25-250)||(8745110-8745332)
chr7 (5-81)||(31972013-31972089)
chr7 (125-196)||(9349761-9349832)
chr7 (139-209)||(1320793-1320863)
chr7 (139-193)||(24324810-24324864)
chr7 (139-209)||(42533264-42533334)
chr7 (139-196)||(6716748-6716805)
chr7 (139-196)||(13311851-13311908)
chr7 (86-208)||(3478352-3478471)
chr7 (124-193)||(12480901-12480970)
chr7 (156-196)||(38485568-38485608)
chr7 (139-209)||(16828948-16829018)
chr7 (139-209)||(16954652-16954722)
chr7 (118-196)||(23983207-23983285)
chr7 (171-253)||(44755581-44755663)
chr7 (124-209)||(46133274-46133360)
chr7 (159-196)||(46262151-46262188)
chr7 (1-43)||(6585045-6585087)
chr7 (162-196)||(17802851-17802885)
chr7 (139-196)||(11379139-11379196)
chr7 (159-196)||(27993568-27993605)
chr7 (159-196)||(35206725-35206762)
[»] chr4 (31 HSPs)
chr4 (1-253)||(8254981-8255233)
chr4 (1-253)||(8268399-8268651)
chr4 (27-253)||(30964395-30964621)
chr4 (1-226)||(31050537-31050761)
chr4 (1-215)||(2825776-2825988)
chr4 (4-253)||(4305679-4305927)
chr4 (1-180)||(35341215-35341391)
chr4 (1-191)||(30167439-30167628)
chr4 (92-209)||(25753171-25753285)
chr4 (62-196)||(38637171-38637301)
chr4 (124-209)||(22811157-22811242)
chr4 (143-196)||(40813797-40813850)
chr4 (124-209)||(53823418-53823503)
chr4 (124-196)||(38929839-38929911)
chr4 (1-43)||(8706019-8706061)
chr4 (152-194)||(39421038-39421080)
chr4 (137-196)||(36962626-36962684)
chr4 (138-196)||(39041285-39041343)
chr4 (127-196)||(46698784-46698854)
chr4 (139-196)||(6599957-6600014)
chr4 (124-193)||(16501746-16501815)
chr4 (139-196)||(21387216-21387273)
chr4 (124-209)||(35800488-35800573)
chr4 (124-209)||(49747526-49747611)
chr4 (124-196)||(28966879-28966951)
chr4 (123-201)||(2061734-2061812)
chr4 (162-196)||(53756768-53756802)
chr4 (139-188)||(2792286-2792335)
chr4 (127-196)||(24740103-24740172)
chr4 (164-196)||(37707392-37707424)
chr4 (124-184)||(41117964-41118024)
[»] chr1 (30 HSPs)
chr1 (1-253)||(41920407-41920663)
chr1 (1-253)||(5389296-5389548)
chr1 (1-252)||(24449805-24450056)
chr1 (18-246)||(24684370-24684598)
chr1 (2-216)||(5459153-5459366)
chr1 (1-253)||(31585634-31585887)
chr1 (5-253)||(46692698-46692946)
chr1 (22-253)||(30685800-30686031)
chr1 (1-226)||(7857635-7857858)
chr1 (1-221)||(27031716-27031934)
chr1 (1-221)||(24658916-24659133)
chr1 (5-221)||(46814347-46814561)
chr1 (129-252)||(20113523-20113647)
chr1 (124-196)||(19598648-19598720)
chr1 (148-209)||(6583237-6583298)
chr1 (124-189)||(27102210-27102275)
chr1 (124-209)||(32864558-32864643)
chr1 (139-209)||(17033585-17033655)
chr1 (148-209)||(9313310-9313371)
chr1 (148-196)||(38544759-38544807)
chr1 (124-209)||(34774870-34774955)
chr1 (139-196)||(15840924-15840981)
chr1 (147-196)||(22200020-22200069)
chr1 (133-193)||(2877652-2877711)
chr1 (156-196)||(4651792-4651832)
chr1 (4-79)||(6764259-6764334)
chr1 (147-186)||(22239699-22239738)
chr1 (124-193)||(16147570-16147639)
chr1 (124-192)||(10785456-10785524)
chr1 (156-196)||(30655572-30655612)
[»] chr8 (25 HSPs)
chr8 (1-253)||(24995269-24995522)
chr8 (18-253)||(36630791-36631026)
chr8 (1-253)||(31207237-31207488)
chr8 (1-253)||(9519453-9519706)
chr8 (5-253)||(37986737-37986985)
chr8 (5-253)||(32066174-32066422)
chr8 (1-253)||(34388881-34389132)
chr8 (1-226)||(15821255-15821478)
chr8 (4-186)||(20138448-20138629)
chr8 (1-211)||(12898150-12898358)
chr8 (29-226)||(16457364-16457559)
chr8 (4-196)||(41893280-41893469)
chr8 (64-177)||(38577728-38577840)
chr8 (75-253)||(10248504-10248680)
chr8 (124-191)||(32945700-32945767)
chr8 (124-253)||(17656999-17657128)
chr8 (127-196)||(15906698-15906767)
chr8 (64-121)||(35816181-35816238)
chr8 (124-196)||(30236125-30236197)
chr8 (7-107)||(22773598-22773699)
chr8 (151-209)||(10552267-10552325)
chr8 (124-196)||(12198066-12198138)
chr8 (124-196)||(12442494-12442566)
chr8 (145-196)||(33967338-33967389)
chr8 (159-196)||(40531244-40531281)
[»] chr5 (21 HSPs)
chr5 (1-216)||(34378090-34378304)
chr5 (5-253)||(698315-698563)
chr5 (1-215)||(29087474-29087686)
chr5 (5-253)||(18593197-18593445)
chr5 (76-163)||(7162267-7162353)
chr5 (124-209)||(13954231-13954316)
chr5 (2-83)||(7161892-7161973)
chr5 (124-196)||(7195236-7195308)
chr5 (148-209)||(7392052-7392113)
chr5 (125-201)||(22675322-22675398)
chr5 (71-208)||(14302377-14302511)
chr5 (124-193)||(21402834-21402903)
chr5 (148-221)||(33258903-33258976)
chr5 (124-196)||(27713081-27713153)
chr5 (148-196)||(39184208-39184256)
chr5 (124-208)||(25992007-25992091)
chr5 (124-208)||(26045961-26046045)
chr5 (124-178)||(8297498-8297552)
chr5 (160-193)||(12046270-12046303)
chr5 (127-196)||(23426356-23426425)
chr5 (28-119)||(18313544-18313636)
[»] chr6 (16 HSPs)
chr6 (5-253)||(3117447-3117695)
chr6 (130-250)||(16510304-16510425)
chr6 (124-209)||(32935336-32935421)
chr6 (75-194)||(20701754-20701870)
chr6 (75-196)||(26215970-26216088)
chr6 (5-59)||(10541980-10542034)
chr6 (150-223)||(26534742-26534815)
chr6 (148-207)||(9224042-9224101)
chr6 (142-193)||(34105428-34105479)
chr6 (139-196)||(34092807-34092864)
chr6 (170-253)||(3880626-3880710)
chr6 (125-209)||(21266112-21266196)
chr6 (125-192)||(13423482-13423549)
chr6 (150-221)||(12794101-12794173)
chr6 (1-53)||(14663231-14663283)
chr6 (156-196)||(34090375-34090415)
[»] scaffold0068 (1 HSPs)
scaffold0068 (9-252)||(35655-35897)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-166)||(5747-5912)
[»] scaffold0200 (1 HSPs)
scaffold0200 (124-209)||(19382-19467)
[»] scaffold0119 (1 HSPs)
scaffold0119 (124-201)||(42135-42212)
[»] scaffold0063 (1 HSPs)
scaffold0063 (124-209)||(58126-58211)
[»] scaffold0050 (1 HSPs)
scaffold0050 (142-209)||(36706-36773)
[»] scaffold1613 (1 HSPs)
scaffold1613 (148-196)||(1038-1086)
[»] scaffold0620 (2 HSPs)
scaffold0620 (142-196)||(3842-3896)
scaffold0620 (139-196)||(8141-8198)


Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 387380 - 387077
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  387380 ctcaaaataaaactcccagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgtgacctccg 387281  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||    
T  387280 atccaccaaaagagcacaaaaacaaaagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagacttta 387181  T
Q  201 gtaccaaattagcaggacacctctcggcccggtgtaccagagaaaaaccaaattagcatttgtagagcaaggacaagtttcttaaagagatggacctcat 300  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  387180 gtaccaaattagcagggcacccctcgccccggtgtaccagagaaaaaccaaattagcatttgtagagcaaggacaagtttcttaaagagatggacctcat 387081  T
Q  301 atct 304  Q
    ||||    
T  387080 atct 387077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 39338740 - 39338992
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||| ||||| |||||||||||||||| |||   ||||||||||||| || ||| || ||| |||||  || ||||||||||||||||    
T  39338740 ctcaaaataaaactcccagacctcaacacccaagctgagtcacaattcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctcc 39338839  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||||| ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||  |    
T  39338840 gatccaccgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactat 39338937  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||||||| |||| ||||  ||||||  |||| |||||||||||||    
T  39338938 agtaccaaattagcagggcacccctcgcccccggtacaccaaagaaaaaccaaat 39338992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 10524302 - 10524051
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatc 103  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||| || ||| || |||||||||  || |||||||||||||||||| |    
T  10524302 aaataaaactcccaaaccccaacacccaagctgagccacatatcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgaac 10524203  T
Q  104 caccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaat----tgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
     ||| ||||||||||| |   |||||||||||||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||||||||  |    
T  10524202 -accgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaatatattgactcccgatctcgaatcaaaagtgatcggcccaccagactat 10524106  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    || |||||||| ||||| |||||||||  ||| ||  ||||||||||||||||||    
T  10524105 agcaccaaattggcagggcacctctcgcccccagtagaccagagaaaaaccaaat 10524051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7874496 - 7874278
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  |||||||||||||||||||| | ||||| ||| ||| ||  |||||||| | || ||||| |||||| |||||||||    
T  7874496 ctcaaaataaaactccaagacttcaacacccaagctgagccacat-tcgaaaagctcctaaccaaatgaacaagtagtttccacaacctctcgacctccg 7874398  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||| |||    
T  7874397 atccaccgaatgagcacaaaa-caaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagacttta 7874299  T
Q  201 gtaccaaattagcaggacacc 221  Q
    | ||||||| |||||| ||||    
T  7874298 gaaccaaatcagcagggcacc 7874278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 14106398 - 14106623
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||  ||||  |||||||||||||||||||| | ||| | ||| | | || |||||| ||| || |||||| |||||| ||||||| |    
T  14106398 ctcaaaataaaactctcagacttcaacacccaagctgagccacat-tcgtaaagctcttaaccgaatgatcatacaacttccacaacctctcgacctctg 14106496  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaact-tgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    ||||||| ||||||||||||||||||| ||||||||||||   |||   |||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  14106497 atccaccgaaagagcacaaaaacaaaaacccaaaaaccaaaactgatctaaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagacttt 14106596  T
Q  200 agtaccaaattagcaggacacctctcg 226  Q
    || ||||||| |||||| |||| ||||    
T  14106597 aggaccaaatcagcagggcacccctcg 14106623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 14405403 - 14405197
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  |||||||||||  ||||||| |  |||  ||| ||| ||  ||||||| ||||| ||||| |||| | |||| || |    
T  14405403 ctcaaaataaaactcccagacttcaacacccaagtcgagccacatg-cgacaagctcctaaccaaatgaacgtgcagtttccacaaccactcgacttctg 14405305  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||| |||    
T  14405304 atccaccgaaagagcacaaaa-caaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 14405206  T
Q  201 gtaccaaat 209  Q
    | |||||||    
T  14405205 gaaccaaat 14405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 5254438 - 5254263
Alignment:
Q  24 caacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaac 123  Q
    |||||||||| ||||||||| | ||||| ||| ||  || |||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| |||||    
T  5254438 caacacccaaactgagccacat-tcgaaaagctccaaaccgaatgaacatgcagcttccacaacctctcgacctccgatccaccgaaaaagcac-aaaac 5254341  T
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||||||| |||||||||||||  ||||||   ||||||||||||  ||| ||||||||||||||||| |||| ||||    
T  5254340 aaaagcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagactttag 5254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 4472035 - 4471935
Alignment:
Q  93 gacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacc 192  Q
    |||||||| |||||||||||| ||| || |   |||||||||||| ||||||| |||||||| ||||||||||||| |||||||| | ||||||||||||    
T  4472035 gacctccggtccaccaaaagaacaccaata---aagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccacc 4471939  T
Q  193 agac 196  Q
    ||||    
T  4471938 agac 4471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 10173539 - 10173659
Alignment:
Q  86 acctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcg 185  Q
    ||||| ||||||||||| |||| ||||| ||| ||  ||||||||||||| | |||||||| |||| || | ||| ||||||| ||||||||||||||||    
T  10173539 acctctcgacctccgattcaccgaaagaacaccaa--caaaagcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcg 10173636  T
Q  186 gcccaccagacgttagtaccaaa 208  Q
    |||||| |||| |||| ||||||    
T  10173637 gcccactagactttaggaccaaa 10173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 1269567 - 1269490
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||| ||||||| | |||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  1269567 aaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttag 1269490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 22885111 - 22885202
Alignment:
Q  102 tccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||| ||||| ||| |||||||   ||||||| | |||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  22885111 tccaccgaaagaacaccaaaacaa---cccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 22885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 16960064 - 16959989
Alignment:
Q  126 aagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||||||||| | |||||||| ||||||| |||||| |||||| |||||||||| |||||||||||||||| ||||    
T  16960064 aagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttag 16959989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 37770580 - 37770723
Alignment:
Q  62 ctgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactc 161  Q
    ||||| || ||| |||||||||| ||||| ||||||||||| |||| |||||    ||  | |||||||||||| | || ||||   |||||||||||||    
T  37770580 ctgaaagatcattcagcttccaacacctctcgacctccgattcaccgaaaga----aaccataaaagcccaaaaccaaaattgatctaaagaattgactc 37770675  T
Q  162 ccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    | ||||  |||||||||||||||||||||||| || |||| |||||||    
T  37770676 ctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaat 37770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 2062973 - 2062900
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacg 197  Q
    |||||||||||| | |||||||| ||||||  ||||||||||||| ||||||||||  ||||||||||||||||    
T  2062973 aaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagacg 2062900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 13337358 - 13337286
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||| |||||| | |||||||||||||||| ||||| ||||| | ||||||||||||||||||||| |||||    
T  13337358 aaaagtccaaaacctaacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagac 13337286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 15126407 - 15126479
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||||| | ||| |||| |||||||  |||||||||||| ||||||||| |||||||||||||||||    
T  15126407 aaaagcccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagac 15126479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 17116754 - 17116923
Alignment:
Q  1 ctcaaaataaaa-ctcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctc 98  Q
    |||||||||||| |||  |||||||||||||||||||||||||| |  |||||||||||| || ||  || || | || | ||  |||||||||||||||    
T  17116754 ctcaaaataaaaactctcagaccccaacacccaagctgagccacattacgaagagcacctaaccgatggatcaagtagatatcacaaacctcgcgacctc 17116853  T
Q  99 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttga 171  Q
    | ||| | | ||| |||||||||   |||||| |||||||||| ||||||||| || |||||||| |||||||    
T  17116854 caatctatcgaaaaagcacaaaa--caaagcctaaaaaccaacatgagtcaaa-aactgactcccaatcttga 17116923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 36276178 - 36276240
Alignment:
Q  133 aaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||| || | |||||||||||    
T  36276178 aaaacaaacttgagtcaaaga-ttgactcccgatctcgaatcaaaagcgaacagcccaccagac 36276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 7696047 - 7695985
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcgg 186  Q
    |||||||||||| | |||||||| ||||||| ||||||||| | | |||||||||||||||||    
T  7696047 aaaagcccaaaacctaacttgagccaaagaactgactcccggtatcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 4162052 - 4162089
Alignment:
Q  159 ctcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagac 4162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 16952334 - 16952443
Alignment:
Q  76 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatca 175  Q
    ||||||||  ||||| | |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| ||||||    
T  16952334 agcttccaccacctctcaacctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatca 16952431  T
Q  176 aaagtgatcggc 187  Q
    |||  |||||||    
T  16952432 aaaaagatcggc 16952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 17022999 - 17023108
Alignment:
Q  76 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatca 175  Q
    ||||||||  ||||| | |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| ||||||    
T  17022999 agcttccaccacctctcaacctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatca 17023096  T
Q  176 aaagtgatcggc 187  Q
    |||  |||||||    
T  17023097 aaaaagatcggc 17023108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 17060305 - 17060414
Alignment:
Q  76 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatca 175  Q
    ||||||||  ||||| | |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| ||||||    
T  17060305 agcttccaccacctctcaacctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatca 17060402  T
Q  176 aaagtgatcggc 187  Q
    |||  |||||||    
T  17060403 aaaaagatcggc 17060414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 23650444 - 23650384
Alignment:
Q  149 aaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||| ||||||||||||| |||||||||| |||| |||||||||||  ||| |||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaat 23650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 27740027 - 27739987
Alignment:
Q  156 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  27740027 tgactctcgatcttgaatcaaaagcgatcggcccaccagac 27739987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 33788653 - 33788701
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| |||||||| |||| |||||||||| ||||||||||||||||    
T  33788653 caaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagac 33788701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 18681151 - 18681080
Alignment:
Q  122 acaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||||||||||| | |||||||  || |||| ||||||||||||| |||||||| |  ||||||||||||    
T  18681151 acaaaagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccacca 18681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7460881 - 7460839
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccac 43  Q
    |||||||||||||||| ||||  ||||||||||||||||||||    
T  7460881 ctcaaaataaaactcccagacttcaacacccaagctgagccac 7460839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 17079281 - 17079190
Alignment:
Q  94 acctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggc 187  Q
    |||||||||||||| ||||| ||| |||  ||| | |||||| | |||||||| ||||||| || |||||||||| |||||||||  |||||||    
T  17079281 acctccgatccaccgaaagaacaccaaa--aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 34230285 - 34230219
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 190  Q
    |||||||||||| | |||||||  ||||||| ||||||| ||||| |||| |||| |||||||||||    
T  34230285 aaaagcccaaaatcaaacttgatccaaagaactgactcctgatctcgaataaaaaatgatcggccca 34230219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 6e-71; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19176710 - 19176489
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaat--gaacatgcagcttccaaaacctcgcgacctc 98  Q
    ||||||||||||| || ||||||| |||||||||||||||||| |  ||||||||||||||| |||   || ||||||||||||| ||||| ||||||||    
T  19176710 ctcaaaataaaacacccagaccccgacacccaagctgagccacattacgaagagcacctgaccgaaaaggatcatgcagcttccacaaccttgcgacctc 19176611  T
Q  99 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 198  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |    
T  19176610 cgatccaccaaaagagcacaaat-caaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 19176512  T
Q  199 tagtaccaaattagcaggacacc 221  Q
    ||| |||||||||||||| ||||    
T  19176511 tagaaccaaattagcagggcacc 19176489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 43012581 - 43012372
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| || |||||| |||||| |||||||||||||| |    
T  43012581 ctcaaattaaaactcctagaccccaacacccaagctgagccacatttcgaagagcacctgaccgaacgatcatgcaacttccacaacctcgcgacctctg 43012482  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    || |||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| |||    
T  43012481 attcaccgaaagagcac-aaaacaaaagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagacttta 43012383  T
Q  201 gtaccaaatta 211  Q
    | |||||||||    
T  43012382 gaaccaaatta 43012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 252
Target Start/End: Original strand, 2392383 - 2392632
Alignment:
Q  3 caaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccga 101  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||  ||| || ||| || |||||||||  || ||||||||||||||||||    
T  2392383 caaaataaaactcctagaccccaacacccaagctgagccacattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccga 2392482  T
Q  102 tccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||||| ||||||||||| |   ||||||||||||||||||| || ||||||| ||||| || |||| ||||||||||||||||| ||||||| |  |||    
T  2392483 tccaccgaaagagcacaacac--aaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatag 2392580  T
Q  202 taccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 252  Q
    ||||||||||||||| |||| ||||  ||||||  ||||||| |||||||||    
T  2392581 taccaaattagcagggcacccctcgcccccggtacaccagagtaaaaccaaa 2392632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 40023448 - 40023666
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  |||||||| ||||||||||| | ||||| ||| ||| || |||||||||||||||||||| |||||| || |||| |    
T  40023448 ctcaaaataaaactcccagactacaacaccctagctgagccacat-tcgaaaagctcctaaccgaatgaacatgcagcttccacaacctcccgtcctctg 40023546  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||| ||||||||| |||    
T  40023547 atccaccgaaagagcacaaaa-caaaagcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagacttta 40023645  T
Q  201 gtaccaaattagcaggacacc 221  Q
      || |||| |||||| ||||    
T  40023646 aaacaaaatcagcagggcacc 40023666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 20611988 - 20611737
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||| |||||||||||||||||| ||||||||||||||| ||| | ||||||||||||| || ||| || ||| |||||  || ||||||||||||||||    
T  20611988 ctcagaataaaactcctagaccc-aacacccaagctgagtcacatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctcc 20611890  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||||| |||||||||||     ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| || ||  |    
T  20611889 gatccaccgaaagagcacaacgc--aaagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactat 20611792  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||| ||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  20611791 agtacgaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 20611737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 9583929 - 9584147
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||||||| |||||||| |||||||   ||||||||| |||||| ||| || | |||  |||| | |||||||| |||||||    
T  9583929 ctcaaaataaaactcccagaccccaaaacccaagcagagccacaattcgaagagcgcctgaccgaaggatcgtgcgacttc-acaacctcgcaacctccg 9584027  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||| ||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||  ||||||||| |||    
T  9584028 atccaccgaaagatcacaaaa-caaaagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagacttta 9584126  T
Q  201 gtaccaaattagcaggacacc 221  Q
    ||| |||||||||||| ||||    
T  9584127 gtatcaaattagcagggcacc 9584147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 23328226 - 23328449
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  |||||||||||||||||||| | ||||| ||| ||| || ||||||||| | |||||||| |||||| |||||||||    
T  23328226 ctcaaaataaaactcccagacttcaacacccaagctgagccacat-tcgaaaagctcctaaccgaatgaacaaggagcttccacaacctctcgacctccg 23328324  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||| |||| |  | ||||||||||| ||||||||||||||||| |||||| || |||    
T  23328325 atccaccgaaagagcacaaaa-caaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaacttta 23328423  T
Q  201 gtaccaaattagcaggacacctctcg 226  Q
    | ||||||| | |||| |||| ||||    
T  23328424 gaaccaaatcaacagggcacccctcg 23328449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 45164061 - 45163835
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctcc 99  Q
    |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| || ||| || ||||||||| ||  |||| ||| |||||||    
T  45164061 ctcaaaataaaactcctagaccccaacacccaagctaagccacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacttcgtgacctcc 45163962  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcc--caccagacg 197  Q
    |||||||| ||||||||||| |   ||||||||||||||||||| || |||| || ||||| | ||||| |||||||||||||||||||  ||| ||||     
T  45163961 gatccaccgaaagagcacaaca--caaagcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagact 45163864  T
Q  198 ttagtaccaaattagcaggacacctctcg 226  Q
     |||||||||||||||||| |||| ||||    
T  45163863 atagtaccaaattagcagggcacccctcg 45163835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 17551158 - 17550969
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||  |||||||||||||||| ||||||||| | ||||||||||||| ||      | |||||||||  || ||||||||||||||||    
T  17551158 ctcaaaataaaactctcagaccccaacacccaaactgagccacatttcgaagagcacctaacc-----atcatgcagctatcacaaacctcgcgacctcc 17551064  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||| || | ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  17551063 gatgcatcgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 17550969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 252
Target Start/End: Original strand, 34475648 - 34475880
Alignment:
Q  20 accccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccaccaaaagagcaca 118  Q
    ||||||||||| |||||||| ||| | ||||||||||||| || ||| || ||| |||||  || |||||||||||||||| ||||||| ||||||||||    
T  34475648 accccaacacctaagctgagtcacatttcgaagagcacctaaccgaaggatcatacagctatcacaaacctcgcgacctccaatccaccgaaagagcaca 34475747  T
Q  119 aaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggac 218  Q
    | |   |||||||||||| |||||| | || |||| |||||||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||| |    
T  34475748 acac--aaagcccaaaaatcaacttaattccaagatttgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggc 34475845  T
Q  219 acctctcg-gcccggtgtaccagagaaaaaccaaa 252  Q
    ||| ||||  ||||||  |||||||||||| ||||    
T  34475846 acccctcgcccccggtacaccagagaaaaatcaaa 34475880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 45398939 - 45398778
Alignment:
Q  64 gaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactccc 163  Q
    |||||||||||||||||||| |||||| |||||||||||||| | |||||||| |||| ||||||||||||||||||||| | |||||||  |||||| |    
T  45398939 gaatgaacatgcagcttccacaacctctcgacctccgatccatcgaaagagcataaaa-caaaagcccaaaaaccaacttaaatcaaagagctgactctc 45398841  T
Q  164 gatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg 226  Q
    ||||| ||||||||||||||||| ||||||||| |||   |||||| |||||| |||| ||||    
T  45398840 gatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccctcg 45398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 47235904 - 47235729
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctcc 99  Q
    |||||||||||||||  ||||||||||||||||||||| |||| | ||||||||||||| || ||| || ||||||||| ||  |||||||||||||||     
T  47235904 ctcaaaataaaactcgcagaccccaacacccaagctgaaccacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctct 47235805  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaa 177  Q
    |||||||| |||||||| ||| || ||||||||||||||||||| ||||||||||  ||||| |||||| ||||||||    
T  47235804 gatccaccgaaagagca-aaacac-aaagcccaaaaaccaacttaagtcaaagaaccgactctcgatctcgaatcaaa 47235729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 31483071 - 31482880
Alignment:
Q  20 accccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccaccaaaagagcaca 118  Q
    ||||||||||| |||||||||||| | ||||||||||||| || ||| || |||||||||  || |||||||||||||||| ||||||| ||||||||||    
T  31483071 accccaacacctaagctgagccacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccaatccaccgaaagagcaca 31482972  T
Q  119 aaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattag 212  Q
    | |   |||||||||||| |||||| | |  |||| |||| ||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||    
T  31482971 acac--aaagcccaaaaatcaacttaattttaagatttgattcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattag 31482880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 252
Target Start/End: Original strand, 2394147 - 2394379
Alignment:
Q  3 caaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccga 101  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||  ||| || ||| || |||||||||  || ||||||||||||||||||    
T  2394147 caaaataaaactcctagaccccaacacccaagctgagccacattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccga 2394246  T
Q  102 tccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||||| |                   ||||||||||||||| || ||||||| ||||| || |||| ||||||||||||||||| ||||||| |  |||    
T  2394247 tccaccga-------------------cccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatag 2394327  T
Q  202 taccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 252  Q
    ||||||||||||||| |||| ||||  ||||||  ||||||| |||||||||    
T  2394328 taccaaattagcagggcacccctcgcccccggtacaccagagtaaaaccaaa 2394379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 53248107 - 53247947
Alignment:
Q  1 ctcaaaataaaa-ctcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctc 98  Q
    |||||||||||| |||  |||||||||||||||| ||||||||| | ||||||||||| | || ||| || ||| || ||  || |||||||||||||||    
T  53248107 ctcaaaataaaaactctcagaccccaacacccaaactgagccacatttcgaagagcacataaccgaaggatcatacaactatcacaaacctcgcgacctc 53248008  T
Q  99 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactc 161  Q
    | ||||||| ||||||||| || ||||||  | |||||||||||||| |||||||||||||||    
T  53248007 caatccaccgaaagagcac-aacacaaaa-tctaaaaaccaacttgaatcaaagaattgactc 53247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 14755286 - 14755339
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14755286 caaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttag 14755339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 47945790 - 47945713
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||||||||||| | |||||||| |||| || ||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  47945790 aaaagcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttag 47945713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 21342735 - 21342603
Alignment:
Q  6 aataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatcca 105  Q
    ||||||||||  ||||  |||||||||||  ||||||| | ||||| |||  || || ||||||||| |||||||||| |||||| ||||||| ||||||    
T  21342735 aataaaactctcagacttcaacacccaagtcgagccacat-tcgaaaagcttctaaccgaatgaacaagcagcttccacaacctctcgacctctgatcca 21342637  T
Q  106 ccaaaagagcacaaaaacaaaagcccaaaaaccaa 140  Q
     | ||||||||| |||||||||||| |||||||||    
T  21342636 tcgaaagagcac-aaaacaaaagcctaaaaaccaa 21342603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 33143899 - 33144018
Alignment:
Q  75 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaa-cttgagtcaaagaattgactcccgatcttgaat 173  Q
    |||||||||  ||||||||||||| |||||||| |||||   || |||   |||||||||||| || |||||  ||||||| ||||||||||||| ||||    
T  33143899 cagcttccaccacctcgcgacctctgatccaccgaaagaaaccataaa---aagcccaaaaactaatcttgatccaaagaactgactcccgatctcgaat 33143995  T
Q  174 caaaagtgatcggcccaccagac 196  Q
    ||||||||||||  |||||||||    
T  33143996 caaaagtgatcgatccaccagac 33144018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 37123466 - 37123397
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||||||||| | || ||||  ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  37123466 aaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccacca 37123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 39021273 - 39021342
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||||||||| |  ||||||  ||||||| |||||||||| || ||||||||||||||||||||||||    
T  39021273 aaaagcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 1652883 - 1652979
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacac 220  Q
    |||||||||||| | |||||||  ||||||| | ||||| ||||| |||||||||||||||||||||| |||  | || ||||||| || |||||||    
T  1652883 aaaagcccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcagaaggacac 1652979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 14879486 - 14879442
Alignment:
Q  157 gactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  14879486 gactcccgatctcgaatcaaaagtgatcggcccaccagactttag 14879442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 14194009 - 14193939
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||| |||||||  ||||||| |||| ||||||||||||||||| || |||||| |||| |||||||    
T  14194009 aacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaat 14193939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 30127332 - 30127274
Alignment:
Q  139 aacttgagtcaa-agaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||||| |||| ||||||||||||| |||||||||| ||||||| ||||||||    
T  30127332 aacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagac 30127274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 5556639 - 5556582
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||  ||||||| ||||||||||||| |||||||||| ||||| ||||||||||    
T  5556639 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagac 5556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 20710740 - 20710777
Alignment:
Q  159 ctcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagac 20710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 30352322 - 30352356
Alignment:
Q  9 aaaactcctagaccccaacacccaagctgagccac 43  Q
    |||||||| ||||||||||||||||||||||||||    
T  30352322 aaaactccgagaccccaacacccaagctgagccac 30352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 2782081 - 2782138
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||| ||||||| || || ||||||||||  ||||||||||||||| ||||||||||    
T  2782081 aactttagtcaaaaaactggctcccgatctaaaatcaaaagtgatcgtcccaccagac 2782138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 30935387 - 30935456
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||| ||||| | |||||||  |||| || | |||||||||||||||||||||| |||| ||||||||    
T  30935387 aaaagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccacca 30935456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 823434 - 823498
Alignment:
Q  126 aagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccca 190  Q
    ||||||||||   ||||||| | ||| || |||||| |||||| |||||||||||||||||||||    
T  823434 aagcccaaaacaaaacttgaatgaaacaactgactctcgatctcgaatcaaaagtgatcggccca 823498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 24099360 - 24099396
Alignment:
Q  160 tcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| | |||||||||||||||||||||||||||    
T  24099360 tcccgatatcgaatcaaaagtgatcggcccaccagac 24099396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 31424304 - 31424248
Alignment:
Q  140 acttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||| |||||| | ||||||||||||| |||||||||| || ||||| |||||||    
T  31424304 acttgaatcaaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagac 31424248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 8e-64; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 38306467 - 38306215
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| | || ||| || |||||||||  || ||||||||||||||||    
T  38306467 ctcaaaataaaactcacagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaaggatcatgcagctatcacaaacctcgcgacctcc 38306368  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    || ||| | ||||||||||| |   |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||  |    
T  38306367 gaaccatcgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactat 38306270  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||||||| |||| ||||  ||| ||  ||||||||||||||||||    
T  38306269 agtaccaaattagcagggcacccctcgccccctgtacaccagagaaaaaccaaat 38306215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 3867322 - 3867073
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||| | | || ||||||||||||||||||||| ||||||||||||||||||  || || ||||||| ||||| |||||||||||||| |    
T  3867322 ctcaaaataaaacttccatactccaacacccaagctgagccacatatcgaagagcacctgaccaaaggatcatgcagtttccataacctcgcgacctctg 3867223  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    |||||||  |||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||| |  |||    
T  3867222 atccaccgcaagagcacaaag-caaaagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatatttta 3867124  T
Q  201 gtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaacca 250  Q
    |||||||||||||||| ||||  ||| || ||||  |||||||||||||||    
T  3867123 gtaccaaattagcaggccacccttcgccctcggtacaccagagaaaaacca 3867073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 5860166 - 5860416
Alignment:
Q  4 aaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgat 102  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||| || |||||||||  || ||||||||||||||||||     
T  5860166 aaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaactgaaggatcatgcagctatcacaaacctcgcgacctccgaa 5860265  T
Q  103 ccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagt 202  Q
    ||||| ||||||||||| |   |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| |||||||| |||  ||||    
T  5860266 ccaccgaaagagcacaacac--aaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagt 5860363  T
Q  203 accaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaatt 254  Q
    |||||||||||||| |||| ||||  ||||||  |  ||||||||||||||||    
T  5860364 accaaattagcagggcacccctcgcccccggtacagtagagaaaaaccaaatt 5860416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 47325760 - 47326012
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctcc 99  Q
    |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| || ||| || ||| ||||| ||  ||||||||||||||||    
T  47325760 ctcaaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctcc 47325859  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||| | ||||||||||  |   |||||||||||||||||||||||||||||  |||||||||||||  ||||||||| ||||||||||||||||  |    
T  47325860 gatccatcgaaagagcacagca--caaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactat 47325957  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||||| | |||| ||||  ||||||  ||||||||||||||||||    
T  47325958 agtaccaaattagcaaggcacccctcgcccccggtacaccagagaaaaaccaaat 47326012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 33435315 - 33435070
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    ||||||| |||||||  ||||| ||||| ||||||||||||||   |||||||||||||||| ||| || |||| ||||| || ||||||||||||||||    
T  33435315 ctcaaaagaaaactctcagacctcaacaaccaagctgagccacaattcgaagagcacctgaccgaaggatcatgtagctttcacaacctcgcgacctccg 33435216  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||| |||||||| ||||| |||| |||||||| ||||||| ||||||||||||| |||||||||||||||| | |||||||| |||    
T  33435215 atccaccgaaagagcac-aaaacaaatgcccacaaacgaacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagacttta 33435117  T
Q  201 gtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaa 246  Q
    ||||||||||| |||| |||| ||||  ||||||  |||||||||||    
T  33435116 gtaccaaattaacagggcacccctcgcccccggtacaccagagaaaa 33435070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 41089623 - 41089875
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| |||||| ||||||||   ||||| ||   ||||||||||||| |  |||  | ||||||||||||| ||||||||||||||||    
T  41089623 ctcaaaataaaactcccagaccctaacacccatcttgagctacacttcgaagagcacctcaacgaagaatcatgcagcttccacaacctcgcgacctccg 41089722  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||| ||||||||||||||||| ||||||||| |||    
T  41089723 atccaccgaaagatcacaaaa-caaaagctcaaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagacttta 41089821  T
Q  201 gtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||||  |||| ||||  |||| |  ||||||||||||||||||    
T  41089822 gtaccaaattagcagagcacccctcgcccccgatacaccagagaaaaaccaaat 41089875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 4 - 253
Target Start/End: Original strand, 3419533 - 3419783
Alignment:
Q  4 aaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgat 102  Q
    ||||||||||||| | ||||||||||||||| | ||||||   |||||| |||||| || ||| || || ||||||  || |||||| | |||||| |||    
T  3419533 aaaataaaactcccaaaccccaacacccaagttaagccacaattcgaagcgcacctaaccgaaggatcaagcagctatcacaaaccttgtgacctctgat 3419632  T
Q  103 ccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagt 202  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||| || |||||    
T  3419633 ccaccgaaagagcacagaaacaaa-gcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagt 3419731  T
Q  203 accaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||| |||| |||| ||||  |||||| |||||||||||||||||||    
T  3419732 accaaattaacagggcacccctcgcccccggtataccagagaaaaaccaaat 3419783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 34390167 - 34389954
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  ||||||||||| |||||||| | | ||| ||| ||| |  |||||||||||||||||||| |||||| |||||||||    
T  34390167 ctcaaaataaaactcccagactacaacacccaagttgagccacattt-gaaaagctcctaatcgaatgaacatgcagcttccacaacctctcgacctccg 34390069  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| |||||||||||||  |||||||||||||||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||| |||    
T  34390068 atccaccgaaagagcacaaaat-aaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 34389970  T
Q  201 gtaccaaattagcagg 216  Q
      ||||||| ||||||    
T  34389969 aaaccaaatcagcagg 34389954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 226
Target Start/End: Original strand, 35745721 - 35745926
Alignment:
Q  24 caacacccaagctgagccacc---tatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaa 120  Q
    ||||||||||||||||||||    ||||||| ||| ||| || |||||||||||||||||||| |||||| | |||||| ||||||| ||||||||||||    
T  35745721 caacacccaagctgagccactatatatcgaaaagctcctaaccgaatgaacatgcagcttccacaacctctccacctccaatccaccgaaagagcacaaa 35745820  T
Q  121 aacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacac 220  Q
    |||||||||||||||||||||||||| ||||||  ||||| ||||||| ||||||||||||||| ||||| ||||| |||| || ||||||| ||| |||    
T  35745821 aacaaaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcac 35745920  T
Q  221 ctctcg 226  Q
    | ||||    
T  35745921 ccctcg 35745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37795195 - 37794971
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||  | ||||||||||||||||||||||||   ||||||||||||| || ||| || |||||||||  || ||||||||||||||||    
T  37795195 ctcaaaataaaactctcaaaccccaacacccaagctgagccacagttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctcc 37795096  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    || ||||| ||||||||||| |   ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||| |||||||||| ||  |    
T  37795095 gaaccaccgaaagagcacaacac--aaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactat 37794998  T
Q  200 agtaccaaattagcaggacacctctcg 226  Q
    | ||||||||||||||| |||| ||||    
T  37794997 attaccaaattagcagggcacccctcg 37794971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 70 - 226
Target Start/End: Complemental strand, 6585046 - 6584891
Alignment:
Q  70 acatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatctt 169  Q
    |||||||| ||||| |||||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||  |||||||||||||     
T  6585046 acatgcaggttccacaacctctcaacctccgatccaccgaaagagcacaaaa-caaaagcccaaaaaccaacttaagccaaagagctgactcccgatctc 6584948  T
Q  170 gaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg 226  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||| |||| ||||    
T  6584947 gaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcg 6584891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 253
Target Start/End: Complemental strand, 10244381 - 10244136
Alignment:
Q  8 taaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccac 106  Q
    ||||| ||| |||||| |||||||||||||||||||   || |||||||||| || ||| || |||||| ||  || |||||||||||||||||| ||||    
T  10244381 taaaaatcccagacccaaacacccaagctgagccacaattcaaagagcacctaaccgaaggatcatgcaactatcacaaacctcgcgacctccgaaccac 10244282  T
Q  107 caaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtacca 206  Q
      ||||||||||| |   |||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||   ||| ||||    
T  10244281 tgaaagagcacaacac--aaaggccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcacca 10244184  T
Q  207 aattagcaggacacctctc-ggcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||| |||| |||   ||||||  ||||||||||||||||||    
T  10244183 aattagcagggcacccctctcccccggtacaccagagaaaaaccaaat 10244136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 44353442 - 44353623
Alignment:
Q  4 aaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgat 102  Q
    ||||||||||||| |||||||||||||||||| | | ||| | ||||||||||||| || ||| || |||||||||  || |||||||||||||||||||    
T  44353442 aaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgat 44353541  T
Q  103 ccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcgg 186  Q
    ||||| ||||||||||| |   ||||||||||||||||| | |||||||||| |||||||||||||  ||||||||||||||||    
T  44353542 ccaccgaaagagcacaacac--aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 48161964 - 48162083
Alignment:
Q  65 aatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccg 164  Q
    |||||||| ||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||| ||| | |||    
T  48161964 aatgaacaagcaacttccacaacctctcgacctctgatccaccaaaagagcacaaaaacaaaagtccaaaaatcaatttgagccaaagaactgatttccg 48162063  T
Q  165 atcttgaatcaaaagtgatc 184  Q
    |||| ||||||||| |||||    
T  48162064 atctcgaatcaaaaatgatc 48162083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 25161011 - 25160770
Alignment:
Q  9 aaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccacc 107  Q
    |||||||  ||||||||||| | ||| |||||||| | || |||||||||| |||||| || ||  |||||  || |||||| | ||||||| |||||||    
T  25161011 aaaactctcagaccccaacatctaagttgagccacatttccaagagcacctaactgaaggatcacacagctatcacaaaccttgagacctccaatccacc 25160912  T
Q  108 aaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaa 207  Q
     ||||||||||| |     ||||||||||||||||| | |  |||| |||||| ||||||| ||||||||||| ||||| |||||||||  ||| |||||    
T  25160911 gaaagagcacaacac----agcccaaaaaccaacttaatttcaagatttgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaa 25160816  T
Q  208 attagcaggacacctctcggcc-cggtgtaccagagaaaaaccaaa 252  Q
    ||||||||| |||| |||| || ||||  |||||||||||||||||    
T  25160815 attagcagggcacccctcgccctcggtacaccagagaaaaaccaaa 25160770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 250
Target Start/End: Complemental strand, 8745332 - 8745110
Alignment:
Q  25 aacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaaca 124  Q
    |||||| |||||||||||| |  |||| ||| |||  ||||| || ||||||||||||| |||||| |||||||||||||||| |||||   || |||      
T  8745332 aacaccaaagctgagccacatc-cgaaaagctcctatctgaaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaaaccataaa-- 8745236  T
Q  125 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctct 224  Q
     |||||||||| | |||||||  ||| ||| ||| ||||||||| ||||||||||||||||||||||||||  |||| ||||||| || ||| |||| ||    
T  8745235 -aagcccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccct 8745137  T
Q  225 cggcc-cggtgtaccagagaaaaacca 250  Q
    |  || ||||| |||||||||| ||||    
T  8745136 caccctcggtgcaccagagaaacacca 8745110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 31972013 - 31972089
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttc 81  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||||||| || ||| || |||||| ||||    
T  31972013 aaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaaggatcatgcaccttc 31972089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 9349832 - 9349761
Alignment:
Q  125 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||| | |||||||  |  |||||||||||||||||| |||||||||||||||||||||||||||    
T  9349832 aaagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccaccagac 9349761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 1320863 - 1320793
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||  |||||||    
T  1320863 aacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaat 1320793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 24324810 - 24324864
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  24324810 aacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccacca 24324864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 42533264 - 42533334
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||| || ||||| ||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||    
T  42533264 aacttaagccaaaggattgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaat 42533334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 6716748 - 6716805
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  6716748 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagac 6716805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 13311908 - 13311851
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac 13311851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 3478471 - 3478352
Alignment:
Q  86 acctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcg 185  Q
    ||||| ||| |||||||||||| ||||| ||| || |   ||||||||||   | |||||| ||||||| | ||||||||||| ||||||||||||||||    
T  3478471 acctctcgatctccgatccaccgaaagaacaccaaca---aagcccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaagtgatcg 3478375  T
Q  186 gcccaccagacgttagtaccaaa 208  Q
    |||||||| || |||| ||||||    
T  3478374 gcccaccaaactttaggaccaaa 3478352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 12480970 - 12480901
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    ||||||| |||| | |||||||  ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  12480970 aaaagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccacca 12480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 38485608 - 38485568
Alignment:
Q  156 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  38485608 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 38485568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 16828948 - 16829018
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||||||||||| |||||  |||||| ||| ||||||||||| ||| ||||||| |||| |||||||    
T  16828948 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaat 16829018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 16954722 - 16954652
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||||||||||| |||||  |||||| ||| ||||||||||||| | ||||||| |||| |||||||    
T  16954722 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaat 16954652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 23983285 - 23983207
Alignment:
Q  118 aaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||| |||| ||||||| | ||||||||  || ||||||||||||||||| |||||||||  ||||| ||||||||||    
T  23983285 aaaaaaaaaaacccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagac 23983207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 253
Target Start/End: Complemental strand, 44755663 - 44755581
Alignment:
Q  171 aatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcggcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||||||||||||||| |||| ||||||| || ||| |||| |||  | ||||  |||||||||| |||||||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcaccacggtacaccagagaaacaccaaat 44755581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 46133274 - 46133360
Alignment:
Q  124 aaaagcccaaaaaccaa-cttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||||||||||||| |||||  || |||| |||||||||||||  ||||||||| ||||||| |||||||| | || |||||||    
T  46133274 aaaagcccaaaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaat 46133360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 46262151 - 46262188
Alignment:
Q  159 ctcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||| |||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagac 46262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6585087 - 6585045
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccac 43  Q
    |||||||||||||||| ||||  ||||||||||||||||||||    
T  6585087 ctcaaaataaaactcccagacttcaacacccaagctgagccac 6585045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 17802851 - 17802885
Alignment:
Q  162 ccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| |||||||||||||||||||||||||||    
T  17802851 ccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 11379139 - 11379196
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||  ||||| | ||||||||||||| |||||||||| ||||||| ||||||||    
T  11379139 aacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagac 11379196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 27993568 - 27993605
Alignment:
Q  159 ctcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagac 27993605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 35206725 - 35206762
Alignment:
Q  159 ctcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||| | |||||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagac 35206762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 8e-64; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 8255233 - 8254981
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||| |||||  || || ||||||  || ||||||||||||||||    
T  8255233 ctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacctaactgatggatcaagcagctatcacaaacctcgcgacctcc 8255134  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||||| |||||||||||||   |||||||||||||||||||||||||||||| ||||| | ||||| | ||||||||||||||||||||||||| ||    
T  8255133 gatccaccgaaagagcacaaaac--aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagacttt 8255036  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  8255035 agtaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 8254981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 8268651 - 8268399
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||| |||||  || || ||||||  || ||||||||||||||||    
T  8268651 ctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacctaactgatggatcaagcagctatcacaaacctcgcgacctcc 8268552  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||||| |||||||||||||   |||||||||||||||||||||||||||||| ||||| | ||||| | ||||||||||||||||||||||||| ||    
T  8268551 gatccaccgaaagagcacaaaac--aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagacttt 8268454  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  8268453 agtaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 8268399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 30964621 - 30964395
Alignment:
Q  27 cacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccaccaaaagagcacaaaaacaa 125  Q
    ||||||||| | ||||| | ||||||||||||| || |||||| |||||||||  || |||||||||||||||||| ||||||||||||||||| | |||    
T  30964621 cacccaagcagggccacatttcgaagagcacctaaccgaatgatcatgcagctatcacaaacctcgcgacctccgaaccaccaaaagagcacaaca-caa 30964523  T
Q  126 aagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctc 225  Q
    || ||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||| ||||   |||||||||||||||||| |||| |||    
T  30964522 aa-cccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctc 30964424  T
Q  226 ggcc-cggtgtaccagagaaaaaccaaat 253  Q
    | || ||||  ||||||||||||||||||    
T  30964423 gccctcggtacaccagagaaaaaccaaat 30964395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31050537 - 31050761
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||  | ||||  ||||||||||||| ||||||  |||||| ||| ||| || |||||||||||||||||||| |||||| |||||||||    
T  31050537 ctcaaaataaaacagccagacttcaacacccaagcttagccaca-atcgaaaagctcctaaccgaatgaacatgcagcttccacaacctctcgacctccg 31050635  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||  ||||||||||||||||||||||||||||||||||  |  ||||||  | ||| ||||||| ||||||||||||||||||||||||||| |||    
T  31050636 atccactgaaagagcacaaaaacaaaagcccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagacttta 31050735  T
Q  201 gtaccaaattagcaggacacctctcg 226  Q
    | ||||||| || ||| |||| ||||    
T  31050736 gaaccaaatcagtagggcacccctcg 31050761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2825988 - 2825776
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| | ||  |||||||||| |||| |||||| ||||| ||| ||| || |||||||||||||||||||| ||||||  ||||||||    
T  2825988 ctcaaaataaaactcccaaacttcaacacccaaactgaaccacct-tcgaaaagctcctaaccgaatgaacatgcagcttccacaacctctagacctccg 2825890  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| |||||| ||||||  ||||||||||||||||  ||||| ||||||  ||| ||||||||| ||||||||| ||||||||||||| ||| |||    
T  2825889 atccaccgaaagagtacaaaat-aaaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggacttta 2825791  T
Q  201 gtaccaaattagcag 215  Q
    | ||||||| |||||    
T  2825790 gaaccaaatcagcag 2825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 253
Target Start/End: Complemental strand, 4305927 - 4305679
Alignment:
Q  4 aaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgat 102  Q
    ||||||||||||| | |||| || ||||||| |||||||| | ||||||||||||| || ||| || ||||||| |  || |||||| |||||||| |      
T  4305927 aaaataaaactcccaaacccaaatacccaagttgagccacat-tcgaagagcacctcaccgaaggatcatgcagttatcacaaaccttgcgacctctgga 4305829  T
Q  103 ccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagt 202  Q
    ||||||||||||||||| |   |||||| ||||||||||||||| ||||||| | ||||||||||| |||||||||||||||| ||||||||||  ||||    
T  4305828 ccaccaaaagagcacaacac--aaagcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagt 4305731  T
Q  203 accaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||| |||| || |  ||||||  ||||||||||||| ||||    
T  4305730 accaaattagcagggcaccgcttgcccccggtacaccagagaaaaacgaaat 4305679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 35341215 - 35341391
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| | ||  ||||||| || ||||||||| | ||||| ||| | | ||||||||||||||||||||||| |||||| ||| |||||    
T  35341215 ctcaaaataaaactcccaaacttcaacaccaaa-ctgagccacat-tcgaaaagctcataactgaatgaacatgcagcttccacaacctctcgaactccg 35341312  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagt 180  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||  ||||| ||||||| | |||||||||    
T  35341313 atccaccgaaagagcac-aaaacaaaaggccaaaaaccaacttgagccaaagagctgacttccgatctcggatcaaaagt 35341391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 30167439 - 30167628
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||| | ||||||||||||||| || ||||| | ||||||||| | | || ||| |  |||||||||  || ||||||||||||||||    
T  30167439 ctcaaaataaaactcccataccccaacacccaagttgggccacatttcgaagagcgcttaaccgaagggtcatgcagctatcataaacctcgcgacctcc 30167538  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 191  Q
    |  ||||| ||||||||||| |   ||| |||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| |||||    
T  30167539 ggaccaccgaaagagcacaacac--aaaccccaaaaatcaacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccac 30167628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 25753285 - 25753171
Alignment:
Q  92 cgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 191  Q
    |||||||||||||||| |||||  |||| ||  ||||||||||| | |||||||| ||||||| ||||||||||||| |||||||||||||||| |||||    
T  25753285 cgacctccgatccaccgaaagaa-acaataa--aaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccac 25753189  T
Q  192 cagacgttagtaccaaat 209  Q
    ||||| |||| |||||||    
T  25753188 cagactttaggaccaaat 25753171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 38637171 - 38637301
Alignment:
Q  62 ctgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactc 161  Q
    ||||| || ||| |||||||||  ||||| ||||||||||||||||||||||   || |||   |||||||||| || |||| || ||||||||||||||    
T  38637171 ctgaaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccataaa---aagcccaaaa-cctacttaagccaaagaattgactc 38637266  T
Q  162 ccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| |||||||||||||||||||| ||||||    
T  38637267 ccgatctcgaatcaaaagtgatcggcccgccagac 38637301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 22811157 - 22811242
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||| |||| | |||||||| ||||||| ||||||||||||| |||| |||| ||||||||||||||||| |||  |||||||    
T  22811157 aaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaat 22811242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 40813797 - 40813850
Alignment:
Q  143 tgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  40813797 tgagtcaaaaaattggctcccgatctcgaatcaaaagtgatcggcccaccagac 40813850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 53823418 - 53823503
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||| ||||||| | |||||||| ||||||| ||||||||||||| |||||||||||||| || ||||||||| |||  |||||||    
T  53823418 aaaaacccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaat 53823503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 38929911 - 38929839
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||||| | |||||||| ||||||| ||||||  ||||| ||||||||||||||||||||| |||||    
T  38929911 aaaagcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagac 38929839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8706019 - 8706061
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccac 43  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  8706019 ctcaaaataaaactcttagaccccaacacccaagctgagccac 8706061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 39421038 - 39421080
Alignment:
Q  152 gaattgactcccgatcttgaatcaaaagtgatcggcccaccag 194  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  39421038 gaattgactcccgatctcgaatcaaaagtgatcggcccaccag 39421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 36962626 - 36962684
Alignment:
Q  137 ccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||||||||| | |||||| ||||| ||||||||||| |||||||||||||||    
T  36962626 ccaacttgagtcaaagact-gactcctgatctcgaatcaaaagtaatcggcccaccagac 36962684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 39041285 - 39041343
Alignment:
Q  138 caacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||| |  || ||||||| ||||| |||||||||||||||||||||||||||    
T  39041285 caacttgagtctagaaactgactcctgatctcgaatcaaaagtgatcggcccaccagac 39041343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 46698784 - 46698854
Alignment:
Q  127 agcccaaaaaccaa-cttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||| || |||||  ||||||| ||||||||||||| ||||||||||  |||||||||||||||    
T  46698784 agcccaaaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagac 46698854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 6599957 - 6600014
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| ||||||||  ||||||||||||  ||||||||| ||||||||||||||||    
T  6599957 aacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagac 6600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 16501815 - 16501746
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||||||||| | |||| ||  ||||||  ||||||||||||| |||||||||| |||||||||||||    
T  16501815 aaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagcgatcggcccacca 16501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 21387216 - 21387273
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| || ||||| ||||| ||||||| ||||||||||||||||| |||||||||    
T  21387216 aacttgaatcgaagaactgacttccgatctcgaatcaaaagtgatcggtccaccagac 21387273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 35800573 - 35800488
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||||||| | |||| || |||||||| ||||| ||||||| |||||||||| ||||||  |||||||| | || |||||||    
T  35800573 aaaagcccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaat 35800488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 49747611 - 49747526
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||| ||||| | |||||||   |||||| |||||| ||||||  ||||||||||||||||| |||||||| |||| |||||||    
T  49747611 aaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaat 49747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 28966951 - 28966879
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||||| | |||||||| ||||||| |||||||| |||| |||||||||  ||||| || |||||||    
T  28966951 aaaagcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagac 28966879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 2061734 - 2061812
Alignment:
Q  123 caaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    ||||||||||||| | ||  |||  ||||||| |||||| | |||| ||||||||||||||| ||||||||||| ||||    
T  2061734 caaaagcccaaaatcaaaactgatccaaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagactttag 2061812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 53756802 - 53756768
Alignment:
Q  162 ccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| |||||||||||||||||||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagac 53756768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 2792286 - 2792335
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcc 188  Q
    ||||||||||||  || ||||| ||||||| |||||||||||||||||||    
T  2792286 aacttgagtcaagaaactgacttccgatctcgaatcaaaagtgatcggcc 2792335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 24740103 - 24740172
Alignment:
Q  127 agcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||| | || ||||  |||| || |||||||||||||||||| | ||| ||||||||||||||||    
T  24740103 agcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattataagcgatcggcccaccagac 24740172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 37707392 - 37707424
Alignment:
Q  164 gatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||| |||||||||||||||||||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccaccagac 37707424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 41117964 - 41118024
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatc 184  Q
    |||||||||||| | || ||||| ||||||| | ||| ||||||| |||||||||||||||    
T  41117964 aaaagcccaaaacctaatttgagccaaagaacttacttccgatctcgaatcaaaagtgatc 41118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 8e-64; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 41920663 - 41920407
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatg-----aacatgcagcttcca-aaacctcgcga 94  Q
    |||||||||||||||| |||||||||||||||||||||||||| |   ||||||||||| |||||| |     | |||||||||  || |||||||||||    
T  41920663 ctcaaaataaaactccaagaccccaacacccaagctgagccacatgatgaagagcacctaactgaaggttaggatcatgcagctatcacaaacctcgcga 41920564  T
Q  95 cctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccag 194  Q
    ||||||||||||| ||||||||||| |   ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  41920563 cctccgatccaccgaaagagcacaacac--aaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccag 41920466  T
Q  195 acgttagtaccaaattagcaggacacctctcggcccggtgtaccagagaaaaaccaaat 253  Q
    ||  |||||||||||||||||| |||| |||| ||| ||  ||||||||||||||||||    
T  41920465 actgtagtaccaaattagcagggcacccctcgccccagtacaccagagaaaaaccaaat 41920407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 5389296 - 5389548
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | || ||| || |||| ||||  || ||||||||||||||||    
T  5389296 ctcaaaataaaactcccagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaaggaccatgtagctaacacaaacctcgcgacctcc 5389395  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    || ||||| ||||||||||| |   ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||  |    
T  5389396 gaaccaccgaaagagcacaacac--aaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactat 5389493  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||| || |||| ||||  ||||||  |||||||||||| |||||    
T  5389494 agtaccaaattagctgggcacccctcgcccccggtacaccagagaaaaatcaaat 5389548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 24449805 - 24450056
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| || ||| || |||||| ||  || ||||||||||||||||    
T  24449805 ctcaaaataaaactcctagaccccaacacccaagctgagccgcatttcgaagagcacctaaccgaaggatcatgcaactatcacaaacctcgcgacctcc 24449904  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||||||||||||||||| |   ||| ||||||||||||||| || ||||||| ||||| |||||||  ||||||||||||||||||||||| ||  |    
T  24449905 gatccaccaaaagagcacaacac--aaatcccaaaaaccaacttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactat 24450002  T
Q  200 agtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 252  Q
    ||||||||| ||||||| |||| ||||  ||||||  |||||||||||||||||    
T  24450003 agtaccaaaatagcagggcacccctcgcccccggtacaccagagaaaaaccaaa 24450056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 24684370 - 24684598
Alignment:
Q  18 agaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcac 117  Q
    ||||||| ||| ||||| |||||||| | |||||||||||||||| ||| || |||||| |||||| ||||||||||||||||||||||| |||||||||    
T  24684370 agaccccgacatccaagttgagccacatttcgaagagcacctgaccgaaggatcatgcatcttccacaacctcgcgacctccgatccaccgaaagagcac 24684469  T
Q  118 aaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcagga 217  Q
     |||||||||||||||||||||||| ||||||||||| ||||  ||||||| |||| |||||||||||||||||||||| |||| | |||||||| |||     
T  24684470 -aaaacaaaagcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtaggg 24684568  T
Q  218 cacctctcg-gcccggtgtaccagagaaaa 246  Q
    |||| ||||  ||||||  |||||||||||    
T  24684569 cacccctcgcccccggtacaccagagaaaa 24684598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 5459366 - 5459153
Alignment:
Q  2 tcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccg 100  Q
    ||||||||||||| | |||||||||||||||||||||||||| | || |||||||||| |||||| || |||||||||  || ||||||||| |||||||    
T  5459366 tcaaaataaaacttccagaccccaacacccaagctgagccacatttcaaagagcacctaactgaaggatcatgcagctatcacaaacctcgcaacctccg 5459267  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    | ||||  ||||||||||| |   |||||||||||| |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||  ||    
T  5459266 aaccactgaaagagcacaacac--aaagcccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactata 5459169  T
Q  201 gtaccaaattagcagg 216  Q
    | ||||||||||||||    
T  5459168 gcaccaaattagcagg 5459153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 31585634 - 31585887
Alignment:
Q  1 ctcaaaataaaactcctagacccc-aacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctc 98  Q
    |||||||||||||||  ||||||| |||||||||||| |||||| | ||||||||||||| ||  || || ||| |||||  || |||||||||||||||    
T  31585634 ctcaaaataaaactctcagacccccaacacccaagcttagccacatttcgaagagcacctaaccaaaggatcatacagctatcacaaacctcgcgacctc 31585733  T
Q  99 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 198  Q
    ||| ||||| ||| ||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||      
T  31585734 cgacccaccgaaatagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacta 31585831  T
Q  199 tagtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||||||| |||| |||  || | ||  ||||||||||||||||||    
T  31585832 tagtaccaaattagcagggcacccctcaccctcagtacaccagagaaaaaccaaat 31585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 46692698 - 46692946
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatc 103  Q
    |||||||||| | |||||||||||||||||||||||||| | ||||||||||| | || | | ||  ||||||||  || |||||||||||||||||| |    
T  46692698 aaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacttaaccggaggataatgcagctatcacaaacctcgcgacctccgaac 46692797  T
Q  104 caccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagta 203  Q
    |||| ||||||||||| |   |||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||  ||  |    
T  46692798 caccgaaagagcacaacac--aaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatca 46692895  T
Q  204 ccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||| |||||||||  ||||||  |||||||||||| |||||    
T  46692896 ccaaattagcagggcacctctcgcccccggtacaccagagaaaaatcaaat 46692946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 253
Target Start/End: Original strand, 30685800 - 30686031
Alignment:
Q  22 cccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccaccaaaagagcacaaa 120  Q
    |||||||||||||||||||||| |||| | |||||||| ||  || || |||||||||  || |||||||||||||||||| ||||| |||||||||||     
T  30685800 cccaacacccaagctgagccacatatcaaggagcacctaaccaaaggatcatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaac 30685899  T
Q  121 aacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacac 220  Q
    |   ||||||||||| |||||||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||  |||||||||||||||||| |||    
T  30685900 ac--aaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcac 30685997  T
Q  221 ctctcggccc-ggtgtaccagagaaaaaccaaat 253  Q
    | |||| ||| |||  ||||||||||||||||||    
T  30685998 ccctcgccccaggtacaccagagaaaaaccaaat 30686031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 7857858 - 7857635
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  |||||||||| ||||||||| | || || ||| ||| || ||||| ||| |||||||||| |||||| ||||| |||    
T  7857858 ctcaaaataaaactcccagacttcaacacccaaactgagccacatttcaaa-agctcctaaccgaatggacaagcagcttccacaacctctcgaccaccg 7857760  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||||||| |||||| |||||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||||||| |||    
T  7857759 atccaccgaaagagcacaaaa-caaaaggccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 7857661  T
Q  201 gtaccaaattagcaggacacctctcg 226  Q
    | ||||||| |||||| |||| ||||    
T  7857660 gaaccaaatcagcagggcacccctcg 7857635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 27031716 - 27031934
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  ||||| |||| ||||||||| | ||||| ||| | | || |||||||||||||||||||| |||||| | |||||||    
T  27031716 ctcaaaataaaactcccagacttcaacatccaaactgagccacat-tcgaaaagctcttaaccgaatgaacatgcagcttccacaacctctcaacctccg 27031814  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||||||| ||||| ||| |||||||||||||| ||||||  |||||| |||||| |||||||||||||||||||||| |||| |||    
T  27031815 atccaccgaaagagcacaaaa-caaaatccctaaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagacttta 27031913  T
Q  201 gtaccaaattagcaggacacc 221  Q
    | ||||||| |||||| ||||    
T  27031914 gaaccaaatcagcagggcacc 27031934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 24659133 - 24658916
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||   ||| |||| |||||||||| | ||||| |||  || || |||||||||||  ||||||| |||||| |||||||||    
T  24659133 ctcaaaataaaactcccagactt-aactcccaggctgagccacat-tcgaaaagcttctaaccgaatgaacatgatgcttccacaacctctcgacctccg 24659036  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||||||| |||| |||||||||||||||| || ||||||  ||||||||||||| |||||||||||||| |||||||||||| |||    
T  24659035 atccaccgaaagagcacaaaaccaaa-gcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagacttta 24658937  T
Q  201 gtaccaaattagcaggacacc 221  Q
    | ||||||| |||||| ||||    
T  24658936 gaaccaaatcagcagggcacc 24658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 46814347 - 46814561
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatcc 104  Q
    |||||||||||| | ||  ||||||||| || ||||||| | ||||| ||| ||| |  |||||||| |||||||||   |||||| |||| ||||||||    
T  46814347 aaataaaactcccatacttcaacacccacgccgagccacat-tcgaaaagctcctaatcgaatgaacttgcagcttctgcaacctctcgacatccgatcc 46814445  T
Q  105 accaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtac 204  Q
    ||| ||||||||||||| |||||||| ||||||||||||||| |||| |  ||||||||||||| ||||||||||||||||||||||||||| |||| ||    
T  46814446 accgaaagagcacaaaa-caaaagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaac 46814544  T
Q  205 caaattagcaggacacc 221  Q
    ||||| |||||| ||||    
T  46814545 caaatcagcagggcacc 46814561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 20113523 - 20113647
Alignment:
Q  129 cccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg-g 227  Q
    ||||||||||||||| ||| |||||| ||| ||||||||||||||||||| |||||| |||| |||||  || ||||||||||||||| |||| ||||      
T  20113523 cccaaaaaccaacttaagttaaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgcc 20113622  T
Q  228 cccggtgtaccagagaaaaaccaaa 252  Q
    ||||||  ||| |||||||||||||    
T  20113623 cccggtacacccgagaaaaaccaaa 20113647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 19598720 - 19598648
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||| ||||||| | |||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||    
T  19598720 aaaaacccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagac 19598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 6583237 - 6583298
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||| |||||||    
T  6583237 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaat 6583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 27102275 - 27102210
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggccc 189  Q
    |||||||||||| | |||||||  ||||||| ||||||||||||| ||||||||||||||||||||    
T  27102275 aaaagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggccc 27102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 32864558 - 32864643
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||||||| | ||||||||||||||||  |||| ||||||| |||| ||||||||| |||||||||| | |||| |||||||    
T  32864558 aaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaat 32864643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 17033655 - 17033585
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||  ||||||| ||||||||||||| || ||||||||||||||||||||||||  ||| |||||||    
T  17033655 aacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaat 17033585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 9313310 - 9313371
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||| |||| |||| |||||||    
T  9313310 caaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaat 9313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 38544759 - 38544807
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  38544759 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagac 38544807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 34774955 - 34774870
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaat-tgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||||||||   |||||||| |||| ||  ||||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  34774955 aaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaat 34774870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 15840924 - 15840981
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| ||||  || ||||||||||||| ||||||||||||||| |||||||||||    
T  15840924 aacttgaatcaagaaactgactcccgatctcgaatcaaaagtgatcagcccaccagac 15840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 22200069 - 22200020
Alignment:
Q  147 tcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||| |||||||| |||||||||||||||||||||||| ||| |||||    
T  22200069 tcaaagcattgactctcgatcttgaatcaaaagtgatcggtccatcagac 22200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 2877711 - 2877652
Alignment:
Q  133 aaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    ||||||||||||||||||||| | | ||||| ||||||||||||| | |||||||||||||    
T  2877711 aaaaccaacttgagtcaaagactgg-ctcccaatcttgaatcaaatgcgatcggcccacca 2877652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 4651832 - 4651792
Alignment:
Q  156 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  4651832 tgactcccgatctcgaatcaaaagtgatcggccccccagac 4651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 6764259 - 6764334
Alignment:
Q  4 aaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct 79  Q
    ||||||||||||| ||||||||  | ||||| |||||||| | ||||||||||||| || ||| || |||||||||    
T  6764259 aaaataaaactcccagaccccagtatccaagttgagccacatttcgaagagcacctaaccgaaggaccatgcagct 6764334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 22239738 - 22239699
Alignment:
Q  147 tcaaagaattgactcccgatcttgaatcaaaagtgatcgg 186  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  22239738 tcaaagcattgactctcgatcttgaatcaaaagtgatcgg 22239699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 16147639 - 16147570
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    ||||| |||||| | |||||||  ||||||| ||||||||||| ||||||||||| | |||| |||||||    
T  16147639 aaaagtccaaaatcaaacttgacccaaagaactgactcccgatattgaatcaaaattcatcgtcccacca 16147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 10785456 - 10785524
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacc 192  Q
    |||||||||||| | |||||||| |||| || ||||||||||||| ||| ||||| | | |||||||||    
T  10785456 aaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcgaagcaaaattaaccggcccacc 10785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 30655612 - 30655572
Alignment:
Q  156 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||||| |||||||||| ||||||||||| ||||    
T  30655612 tgactcccgatctcgaatcaaaagcgatcggcccactagac 30655572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 5e-62; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 24995269 - 24995522
Alignment:
Q  1 ctcaaaataaaactcctagacccc-aacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctc 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||  | ||||||||||||| || ||| || |||||||||  || |||||||||||||||    
T  24995269 ctcaaaataaaactcctagacccccaacacccaagctgagccatatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctc 24995368  T
Q  99 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 198  Q
     || ||||  ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||      
T  24995369 tgacccactgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacta 24995466  T
Q  199 tagtaccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||||| |||||| ||||  ||| ||  ||||||||||||||||||    
T  24995467 tagtaccaaattagcaagacacccctcgcccccagtacaccagagaaaaaccaaat 24995522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 36631026 - 36630791
Alignment:
Q  18 agaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcac 117  Q
    ||||||| ||| ||||| |||||||| | |||||||||||||||| ||| || ||||||||| ||| ||||||||||||||||||||| | |||||||||    
T  36631026 agacccccacatccaagttgagccacatttcgaagagcacctgaccgaaggatcatgcagctcccacaacctcgcgacctccgatccatcgaaagagcac 36630927  T
Q  118 aaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcagga 217  Q
    |||| ||||||||||||||| |||| ||||||||||| |||| |||||||| |||| |||||||||||||||||||||| |||| ||||||||||||||     
T  36630926 aaaa-caaaagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcaggg 36630828  T
Q  218 cacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    |||| ||||  ||||||  |||| |||||||||||||    
T  36630827 cacccctcgcccccggtacaccaaagaaaaaccaaat 36630791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 31207237 - 31207488
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||| | || ||||||||||||||||||||| | ||||||||||||| || ||| |  ||| |||||  || ||||||||||||||||    
T  31207237 ctcaaaataaaactcccatactccaacacccaagctgagccacatttcgaagagcacctaaccgaagggtcattcagctatcacaaacctcgcgacctcc 31207336  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||||| ||| ||||||| |   ||| ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  |    
T  31207337 gatccaccgaaaaagcacaacac--aaatcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactat 31207434  T
Q  200 agtaccaaattagcaggacacctctcggccc-ggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||||||| |||| |||| ||| |||  ||||||||||||||||||    
T  31207435 agtaccaaattagcagggcacc-ctcgcccctggtacaccagagaaaaaccaaat 31207488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 9519706 - 9519453
Alignment:
Q  1 ctcaaaataaaactcctagacccc-aacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctc 98  Q
    |||||||||||||||  ||||||| ||||||||||||||||||  | ||||||||||||| || |||||| |||||||||  || |||| |||| |||||    
T  9519706 ctcaaaataaaactctcagacccccaacacccaagctgagccatatttcgaagagcacctaaccgaatgatcatgcagctatcacaaacttcgcaacctc 9519607  T
Q  99 cgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgt 198  Q
    ||| ||||| ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||      
T  9519606 cgacccaccgaaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagacta 9519509  T
Q  199 tagtaccaaattagcaggacacctctc-ggcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||||||| |||| |||   ||||||  ||||||||||||||||||    
T  9519508 tagtaccaaattagcagggcacccctcacccccggtacaccagagaaaaaccaaat 9519453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 37986737 - 37986985
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatc 103  Q
    |||||||||||| |||||  ||||||||||||||||||| | ||||||||||||| || ||| || || ||||||  || |||||||||||||||||| |    
T  37986737 aaataaaactcccagaccgaaacacccaagctgagccacatttcgaagagcacctaaccgaaggatcaggcagctatcacaaacctcgcgacctccgaac 37986836  T
Q  104 caccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagta 203  Q
    |||| ||||||||||| |   ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||  ||  |    
T  37986837 caccgaaagagcacaacac--aaagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataaca 37986934  T
Q  204 ccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  37986935 ccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 37986985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 32066174 - 32066422
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatc 103  Q
    |||||||||||  ||||||||||||||||||||| |||| | || ||||||| || || |||||| |||||||||  || ||||||||| ||||| || |    
T  32066174 aaataaaactctcagaccccaacacccaagctgaaccacatttcaaagagcatctaaccgaatgatcatgcagctatcacaaacctcgcaacctctgaac 32066273  T
Q  104 caccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagta 203  Q
    |||| ||||||||||| |   |||||||||||||||||| ||||||||||  ||||||||||| | |||||||||||||||||||||||||||  ||| |    
T  32066274 caccgaaagagcacaacac--aaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagca 32066371  T
Q  204 ccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||| |||| ||||  ||||||  || |||||||||||||||    
T  32066372 ccaaattagcagggcacccctcgcccccggtacactagagaaaaaccaaat 32066422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 34388881 - 34389132
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||  | |||||||||||||||||||||||| |   ||||| ||||| |||||| || ||   ||||  || ||||||| |||||| |    
T  34388881 ctcaaaataaaactctcataccccaacacccaagctgagccacatgatgaagaacacctaactgaaggatcact-agctatcacaaacctcacgacctac 34388979  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    |||||||| ||| ||||||| |   |||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||  |    
T  34388980 gatccaccgaaatagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactat 34389077  T
Q  200 agtaccaaattagcaggacacctctcggccc-ggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||||||| |||| |||| ||| |||  ||||||||||||||||||    
T  34389078 agtaccaaattagcagggcacccctcgcccctggtacaccagagaaaaaccaaat 34389132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 15821255 - 15821478
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    |||||||||||||||| ||||  ||||| || ||||||||||| | ||||| ||| ||| ||  |||||||| |  | ||||| |||||| ||||||| |    
T  15821255 ctcaaaataaaactcccagacttcaacatccgagctgagccacat-tcgaaaagctcctaaccaaatgaacaagttgtttccacaacctctcgacctctg 15821353  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||  ||||||||||||| ||||||||||||||||||| | |||||||||  ||||||||||||| ||||||||||||||| ||||||||||| |||    
T  15821354 atccactgaaagagcacaaaa-caaaagcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagacttta 15821452  T
Q  201 gtaccaaattagcaggacacctctcg 226  Q
    | ||||||| |||||| |||| ||||    
T  15821453 gaaccaaatcagcagggcacccctcg 15821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 186
Target Start/End: Complemental strand, 20138629 - 20138448
Alignment:
Q  4 aaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgat 102  Q
    ||||||||||||| |||||||||||||||||| | | ||| | ||||||||||||| || ||| || |||||||||  || |||||||||||||||||||    
T  20138629 aaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgat 20138530  T
Q  103 ccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcgg 186  Q
    ||||| ||||||||||| |   ||||||||||||||||| | |||||||||| |||||||||||||  ||||||||||||||||    
T  20138529 ccaccgaaagagcacaacac--aaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 12898150 - 12898358
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctcc 99  Q
    |||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||| || ||| || || |||||| ||  ||||||||||||||||    
T  12898150 ctcaaaataaaactctaagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaaggatca-gcagctatcacaaacctcgcgacctcc 12898248  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    || ||| | ||||||||||| |   ||||||| ||||||||||||||| | | || ||||||| ||||| |||||||||||||||||  ||||||||  |    
T  12898249 gaaccatcgaaagagcacaaca--caaagccccaaaaccaacttgagttagataactgactccggatctcgaatcaaaagtgatcgggtcaccagactat 12898346  T
Q  200 agtaccaaatta 211  Q
    | ||||||||||    
T  12898347 attaccaaatta 12898358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 16457364 - 16457559
Alignment:
Q  29 cccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaa 127  Q
    ||||||||||||||| | || |||||||||| ||   | || |||||||||  || ||||||| |||| ||||| ||||| ||||||||||| |   |||    
T  16457364 cccaagctgagccacatttcaaagagcacctaaccacaagatcatgcagctatcacaaacctcacgacatccgaaccaccgaaagagcacaacac--aaa 16457461  T
Q  128 gcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcg 226  Q
    ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| ||  ||||| ||||||||||||||||| ||||    
T  16457462 gcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcg 16457559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 41893280 - 41893469
Alignment:
Q  4 aaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgat 102  Q
    |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |||| |  ||| || |||||||||  || |||||| ||||||||  |     
T  41893280 aaaatagaactcccagacctcaacacccaagctgagccacatttcgaagagtacct-atagaaggatcatgcagctatcacaaaccttgcgacctcttaa 41893378  T
Q  103 ccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||||||||| |   ||||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||| | ||||||||||||    
T  41893379 ccaccaaaagagcacaacac--aaagcccaaaaac-aacttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagac 41893469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 38577728 - 38577840
Alignment:
Q  64 gaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactccc 163  Q
    |||||||||||||||||||| || ||| ||||||| |||||||| ||||||||| |||||||||| |||||||||||||| |  ||||||| | ||||||    
T  38577728 gaatgaacatgcagcttccacaaactctcgacctctgatccaccgaaagagcac-aaaacaaaagtccaaaaaccaacttaaaccaaagaactaactccc 38577826  T
Q  164 gatcttgaatcaaa 177  Q
    ||||| ||||||||    
T  38577827 gatctcgaatcaaa 38577840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 253
Target Start/End: Original strand, 10248504 - 10248680
Alignment:
Q  75 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatc 174  Q
    |||||||||  |||||||| |||||||||||||||||||   || | |   ||||  |||| | |||||||| ||||||| |||||||||||||||||||    
T  10248504 cagcttccaccacctcgcggcctccgatccaccaaaagaaaccatata---aagcaaaaaaccaaacttgagccaaagaactgactcccgatcttgaatc 10248600  T
Q  175 aaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctc-ggcccggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||| |||||| |  |||| || ||||||| |||||||| |||   ||||||  |||||||||| |||||||    
T  10248601 aaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacaccagagaaacaccaaat 10248680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 32945700 - 32945767
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccac 191  Q
    |||||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  32945700 aaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccac 32945767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 253
Target Start/End: Original strand, 17656999 - 17657128
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctc 223  Q
    ||||| |||||| | |||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||| || ||||  |||| |||| ||| |||| |    
T  17656999 aaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccc 17657098  T
Q  224 tcggcccggtgtaccagagaaaaaccaaat 253  Q
    ||  ||||||  | |||||||| |||||||    
T  17657099 tcatcccggtacatcagagaaacaccaaat 17657128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 15906767 - 15906698
Alignment:
Q  127 agcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||| | |||||||  ||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  15906767 agcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagac 15906698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 35816181 - 35816238
Alignment:
Q  64 gaatgaacatgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaa 121  Q
    |||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||    
T  35816181 gaatgaacatgcagcttccacaatctctcaacctccgatccaccaaaagagcacaaaa 35816238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 30236125 - 30236197
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||||| | |||||||  ||||||| ||||||||||||| |||||||||| ||||| ||||||||||    
T  30236125 aaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagac 30236197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 22773699 - 22773598
Alignment:
Q  7 ataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctccgatcca 105  Q
    |||||||||| |||||||||||||||| ||||||||| | ||||||||||||| || ||| || |||| || | ||  |||||||| ||||||| |||||    
T  22773699 ataaaactcccagaccccaacacccaaactgagccacatttcgaagagcacctaacagaaggatcatgtagatatcacaaacctcgtgacctccaatcca 22773600  T
Q  106 cc 107  Q
    ||    
T  22773599 cc 22773598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 10552325 - 10552267
Alignment:
Q  151 agaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||| | || |||||||    
T  10552325 agaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaat 10552267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 12198066 - 12198138
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||| ||||| | |||||||| ||||||| |||||||| || || ||| |||||||||||| |||||||||    
T  12198066 aaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12198138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 12442494 - 12442566
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||| ||||| | |||||||| ||||||| |||||||| || || ||| |||||||||||| |||||||||    
T  12442494 aaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagac 12442566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 33967389 - 33967338
Alignment:
Q  145 agtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| | ||| |||| ||||| |||||||||||||||||||||||||||    
T  33967389 agtcaaaaagttggctcctgatctcgaatcaaaagtgatcggcccaccagac 33967338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 40531281 - 40531244
Alignment:
Q  159 ctcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagac 40531244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 5e-53; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 34378304 - 34378090
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctcc 99  Q
    |||||||||||||||  | |||||||||||||||||||||||| |  ||||||||| || || ||| || ||  || ||  || ||||||||||||||||    
T  34378304 ctcaaaataaaactctcaaaccccaacacccaagctgagccacattacgaagagcatctaaccgaaggatcaaacaactatcacaaacctcgcgacctcc 34378205  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtt 199  Q
    | |||||| |||||||||||||   |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||    
T  34378204 ggtccaccgaaagagcacaaaac--aaagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttt 34378107  T
Q  200 agtaccaaattagcagg 216  Q
    |||||||||||||||||    
T  34378106 agtaccaaattagcagg 34378090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 698563 - 698315
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatc 103  Q
    |||||||||||  |||||||||||||||||||||||||| | || |||||||||| || ||| ||  ||||||||  || ||||||||| ||||| || |    
T  698563 aaataaaactctcagaccccaacacccaagctgagccacatttcaaagagcacctaaccgaaggattatgcagctatcacaaacctcgcaacctctgaac 698464  T
Q  104 caccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagta 203  Q
    |||  |||||| |||| |   ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |||||||||  ||| |    
T  698463 cacagaaagagtacaacac--aaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagca 698366  T
Q  204 ccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||| |||| ||||  ||||||  ||||||||||||||||||    
T  698365 ccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaat 698315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 29087686 - 29087474
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacctcgcgacctccg 100  Q
    ||||||||||| |||| ||||||||||| | ||| |||||||| || |||||||||||||||  || || |||| |||| ||| ||||||||||||||||    
T  29087686 ctcaaaataaagctcccagaccccaacatctaagttgagccacata-cgaagagcacctgaccaaaggatcatggagctaccataacctcgcgacctccg 29087588  T
Q  101 atccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgtta 200  Q
    ||||||| ||||||||||||| |||||||||| ||||||| |||| |||||||| ||||||| ||||| |||||||||| |||| | ||||||||| |||    
T  29087587 atccaccgaaagagcacaaaa-caaaagcccagaaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagacttta 29087489  T
Q  201 gtaccaaattagcag 215  Q
    | |||||| ||||||    
T  29087488 gaaccaaaatagcag 29087474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 18593445 - 18593197
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctccgatc 103  Q
    |||||||||||| ||||||||||||||||| |||||||| | ||||||| ||||| || ||| || |||||| || ||  ||| |||||||||||||| |    
T  18593445 aaataaaactcccagaccccaacacccaagttgagccacatttcgaagaacacctaaccgaaggatcatgcacctatcacaaatctcgcgacctccgaac 18593346  T
Q  104 caccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagta 203  Q
    |||| ||||||||||| |    ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||| | ||  ||| |    
T  18593345 caccgaaagagcacaaca--ctaagcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagca 18593248  T
Q  204 ccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
    ||||||||||||| || | ||||  ||||||  || |||||||||||||||    
T  18593247 ccaaattagcagggcatccctcgcccccggtacacgagagaaaaaccaaat 18593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 7162267 - 7162353
Alignment:
Q  76 agcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactccc 163  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  7162267 agcttccataacctcgcgacctccgatccatcgaaagagcacaaaa-caaaaacccaaaaaccaacttgagtcaaagaactgactccc 7162353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 13954231 - 13954316
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||||||| | |||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  13954231 aaaagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 13954316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 7161892 - 7161973
Alignment:
Q  2 tcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca 83  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||  || || |||||||||||||    
T  7161892 tcaaaataaaactcccagaccccaacacacaagctgagccacatatcgaagaacacctgaccaaaggatcatgcagcttcca 7161973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 7195236 - 7195308
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||||  | |||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  7195236 aaaagcccaaactctaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagac 7195308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 7392052 - 7392113
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||| |||| |||||||    
T  7392052 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaat 7392113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 22675322 - 22675398
Alignment:
Q  125 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    ||||||||||| | |||||||| ||||||| ||||||||||||| |||||||||  |||||| ||||||||| ||||    
T  22675322 aaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttag 22675398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 14302377 - 14302511
Alignment:
Q  71 catgcagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttg 170  Q
    |||||||||||||  ||||| |||||||||||||||| |||||   || |||   |||||||||| | ||||||   ||||||| |||||||| |||| |    
T  14302377 catgcagcttccaccacctctcgacctccgatccaccgaaagaaaccataaa---aagcccaaaaccaaacttgctccaaagaactgactcccaatctcg 14302473  T
Q  171 aatcaaaagtgatcggcccaccagacgttagtaccaaa 208  Q
    || ||||||||||| | ||||||||| |||| ||||||    
T  14302474 aaccaaaagtgatcagtccaccagactttaggaccaaa 14302511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 21402834 - 21402903
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||| ||||| | ||| |||||||||||| ||||||||||||| |||  |||||||||||||||||||    
T  21402834 aaaagctcaaaaccaaacctgagtcaaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 33258903 - 33258976
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacc 221  Q
    ||||||| | ||||| ||||| ||||||||||||||||||||||||||| |||| ||||||  || ||||||||    
T  33258903 caaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacc 33258976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 27713153 - 27713081
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||||| | |||||||| ||||||| ||| ||||||||| |||||||||  ||||||||||| ||||    
T  27713153 aaaagcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagac 27713081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 39184208 - 39184256
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  39184208 caaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 39184256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 25992091 - 25992007
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaa 208  Q
    |||||||||||| | | || |||  |||||| |||||| |||||| |||||||||| ||| |||||||||||| |||| ||||||    
T  25992091 aaaagcccaaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaa 25992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 26045961 - 26046045
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaa 208  Q
    ||||| |||||| | |||||||| ||||  | | ||||||||||| |||||||||||||||||  |||||||| |||| ||||||    
T  26045961 aaaagtccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaa 26046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 8297552 - 8297498
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaa 178  Q
    ||||| |||||| | |||||||| ||||||| ||||||||||||| |||||||||    
T  8297552 aaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 8297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 12046303 - 12046270
Alignment:
Q  160 tcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    ||||||||| ||||||||||||||||||||||||    
T  12046303 tcccgatctcgaatcaaaagtgatcggcccacca 12046270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 23426425 - 23426356
Alignment:
Q  127 agcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||| | || |||| || ||||| |||||||| |||| |||||||||||| |||| |||||||||    
T  23426425 agcccaaaaccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagac 23426356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 18313544 - 18313636
Alignment:
Q  28 acccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctccgatccaccaaaagagcacaa 119  Q
    |||||| || |||||| | ||||||||||||| |  |||||| ||||||||| ||  |||||||||||||| | ||||||| |||||| ||||    
T  18313544 acccaaactaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatccaccgaaagagtacaa 18313636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 3117695 - 3117447
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatc 103  Q
    |||||||||||| ||||||||||||||||| |||||||| | ||||||||||| | |  ||| || |||||| ||  || |||||||||||||||||| |    
T  3117695 aaataaaactcccagaccccaacacccaagttgagccacatttcgaagagcacataatcgaaggatcatgcaactatcacaaacctcgcgacctccgaac 3117596  T
Q  104 caccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagta 203  Q
    |||  ||||||||||| |   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||  |    
T  3117595 cacataaagagcacaacac--aaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatca 3117498  T
Q  204 ccaaattagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaat 253  Q
     |||||||||||| |||| ||||  |||||   ||||||||||||||||||    
T  3117497 acaaattagcagggcacccctcgcccccggaacaccagagaaaaaccaaat 3117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 16510304 - 16510425
Alignment:
Q  130 ccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcggcc 229  Q
    |||||||||||||||||| |||||| |||||| | |||| |||||||||||||||||||||| |||| |||| |||||||||||||| |||| || | ||    
T  16510304 ccaaaaaccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccc 16510403  T
Q  230 -cggtgtaccagagaaaaacca 250  Q
     ||||  |||||||||||||||    
T  16510404 tcggtacaccagagaaaaacca 16510425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 32935336 - 32935421
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||| |||||| | |||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||| | || |||||||    
T  32935336 aaaagtccaaaatcaaacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaat 32935421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 20701754 - 20701870
Alignment:
Q  75 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatc 174  Q
    |||||||||  ||||| |||||||||||||||| |||||   || |||   |||||||||| | ||||| || ||||||| | ||||||||||| |||||    
T  20701754 cagcttccactacctctcgacctccgatccaccgaaagaaaccataaa---aagcccaaaaccaaacttaagccaaagaactaactcccgatctcgaatc 20701850  T
Q  175 aaaagtgatcggcccaccag 194  Q
    ||||||||||||| ||||||    
T  20701851 aaaagtgatcggcacaccag 20701870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 26215970 - 26216088
Alignment:
Q  75 cagcttccaaaacctcgcgacctccgatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatc 174  Q
    |||||||||  ||| ||| | ||||| |||||||||||| ||| ||||   |||||||||| | ||  |||  | ||||| ||||||||||||| |||||    
T  26215970 cagcttccaccaccgcgcaatctccggtccaccaaaagaacaccaaaa---aagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatc 26216066  T
Q  175 aaaagtgatcggcccaccagac 196  Q
    ||||||||||||||||||||||    
T  26216067 aaaagtgatcggcccaccagac 26216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 10542034 - 10541980
Alignment:
Q  5 aaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacct 59  Q
    |||||||||| | |||||||||||||||||||||||||| | |||||||||||||    
T  10542034 aaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacct 10541980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 26534742 - 26534815
Alignment:
Q  150 aagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctc 223  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||| | || ||||||| || ||| ||||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaaggccacctc 26534815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 9224101 - 9224042
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaa 207  Q
    ||||||| ||||||||||||| |||||||||| |||| ||||||||||| |||| |||||    
T  9224101 caaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaa 9224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 34105479 - 34105428
Alignment:
Q  142 ttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacca 193  Q
    |||||||||  || ||||||||||||| ||||||||||||||||||||||||    
T  34105479 ttgagtcaagaaactgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 34092864 - 34092807
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| ||||||||| |||| || |||| |||||||||||||||||| ||||||||    
T  34092864 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagac 34092807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 3880626 - 3880710
Alignment:
Q  170 gaatcaaaagtgatcggcccaccagacgttagtaccaaattagcaggacacctctcggcc-cggtgtaccagagaaaaaccaaat 253  Q
    |||||||||||||||||||||||| || |||| ||||||| || ||| ||||||||  || ||||  |||||||||| |||||||    
T  3880626 gaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaat 3880710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 21266196 - 21266112
Alignment:
Q  125 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||||||| | |||||||  || | || | ||||||||||| |||||||||| |||||||||||||| | |||| |||||||    
T  21266196 aaagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaat 21266112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 13423549 - 13423482
Alignment:
Q  125 aaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccacc 192  Q
    |||||||| || | |||||||| |||||||  ||||| |||||| ||||||||||||||||| |||||    
T  13423549 aaagcccataaccaaacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 12794173 - 12794101
Alignment:
Q  150 aagaattgactcccgatcttgaatcaaaag-tgatcggcccaccagacgttagtaccaaattagcaggacacc 221  Q
    ||||| ||||||| ||||| |||||||||| |||||||||||| |||| |||| ||||||  || ||||||||    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacacc 12794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14663283 - 14663231
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaaga 53  Q
    |||||||||||||||| | ||||||||| |||||| ||||||| | |||||||    
T  14663283 ctcaaaataaaactcccaaaccccaacatccaagccgagccacatttcgaaga 14663231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 34090415 - 34090375
Alignment:
Q  156 tgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||||||||| ||||||||| |||||| ||||||||||    
T  34090415 tgactcccgatctcgaatcaaaattgatcgacccaccagac 34090375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 35655 - 35897
Alignment:
Q  9 aaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttcca-aaacctcgcgacctccgatccacc 107  Q
    |||||||| | |||||||||||||||||||||| | | ||||||||||||| || ||  || |||||||||  || ||| |||| |||||||||||||||    
T  35655 aaaactcccacaccccaacacccaagctgagcctcatttcgaagagcacctaaccgatggatcatgcagctatcacaaatctcgtgacctccgatccacc 35754  T
Q  108 aaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaa 207  Q
     ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||  ||  |||||    
T  35755 gaaagagcacaacat--aaagcccaaaaaccaacttaagtcaaagaat-gactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaa 35851  T
Q  208 attagcaggacacctctcg-gcccggtgtaccagagaaaaaccaaa 252  Q
    ||||||  | |||| ||||  ||||||  |||||||||||||||||    
T  35852 attagctaggcacccctcgcccccggtacaccagagaaaaaccaaa 35897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 5912 - 5747
Alignment:
Q  1 ctcaaaataaaactcctagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagct-tccaaaacctcgcgacctcc 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |  |||||||||||| || ||| || || | |||| ||  |||||| |||||||||    
T  5912 ctcaaaataaaactcccagatcccaacacccaagctgagccacattacgaagagcacctaaccgaaggatcaagtagctatcacaaaccttgcgacctcc 5813  T
Q  100 gatccaccaaaagagcacaaaaacaaaagcccaaaaaccaacttgagtcaaagaattgactcccgat 166  Q
    |||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  5812 gatctaccgaaagagcacaaaaac-aaagcccaaaaaccaacctgagtcaaagaactgactcccgat 5747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 19467 - 19382
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    |||||||||||| | |||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  19467 aaaagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 19382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 42135 - 42212
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttag 201  Q
    |||| ||||||| | |||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  42135 aaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttag 42212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 58211 - 58126
Alignment:
Q  124 aaaagcccaaaaaccaacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||||| |||| | |||||||  |||| |||||||| |||||||||||||||||||||||||||||||| || |||| |||||||    
T  58211 aaaagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaat 58126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 36773 - 36706
Alignment:
Q  142 ttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagacgttagtaccaaat 209  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||| |||| |||||| |||| |||||||    
T  36773 ttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaat 36706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 1038 - 1086
Alignment:
Q  148 caaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  1038 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagac 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 3896 - 3842
Alignment:
Q  142 ttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    |||||||||  || ||||||||||||| ||||||||| |||||||||||||||||    
T  3896 ttgagtcaagaaactgactcccgatctcgaatcaaaattgatcggcccaccagac 3842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 8198 - 8141
Alignment:
Q  139 aacttgagtcaaagaattgactcccgatcttgaatcaaaagtgatcggcccaccagac 196  Q
    ||||||| ||||||||| |||| || |||| |||||||||||||||||| ||||||||    
T  8198 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagac 8141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University