View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6962_high_37 (Length: 212)
Name: NF6962_high_37
Description: NF6962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6962_high_37 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 35327561 - 35327731
Alignment:
| Q |
17 |
gtgaacctggaggcacatagcagcatcgagtgtgttgcgaatgcaggttaagtataagcgtaatgttgtgctaccctgaaatcaaaaacacatgaattga |
116 |
Q |
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| T |
35327561 |
gtgaacctggaggcacatagcagcatcgagtgtgttgcgaatgcaggttaagtataagcgtaatgttgtgctaccctgaaatcaaaaacacatgaattga |
35327660 |
T |
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| Q |
117 |
gaagatgaagatggaaaattgcgatgatgaagaacaagattcagtgtgtatcgtaccattgctttgggtctgaatct |
193 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35327661 |
gaagatga------aaaattgcgatgatgaagaacaagattcagtgtgtatcgtaccattgctttgggtctgaatct |
35327731 |
T |
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