View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6962_low_12 (Length: 461)

Name: NF6962_low_12
Description: NF6962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6962_low_12
NF6962_low_12
[»] chr3 (7 HSPs)
chr3 (14-461)||(14694119-14694566)
chr3 (14-461)||(13307768-13308215)
chr3 (14-461)||(10149642-10150089)
chr3 (57-461)||(10781031-10781435)
chr3 (14-217)||(7402879-7403082)
chr3 (45-163)||(15201461-15201579)
chr3 (45-163)||(15240664-15240782)
[»] chr7 (6 HSPs)
chr7 (15-461)||(18134429-18134875)
chr7 (14-461)||(14343549-14343996)
chr7 (14-461)||(18172526-18172973)
chr7 (35-461)||(15763869-15764295)
chr7 (41-461)||(11977840-11978260)
chr7 (51-154)||(18452888-18452991)
[»] chr1 (3 HSPs)
chr1 (14-461)||(41381216-41381663)
chr1 (18-461)||(22806734-22807177)
chr1 (42-461)||(21166069-21166488)
[»] chr8 (5 HSPs)
chr8 (14-460)||(17423747-17424193)
chr8 (35-461)||(22349678-22350104)
chr8 (92-461)||(22066615-22066984)
chr8 (65-424)||(15913028-15913387)
chr8 (45-149)||(24972109-24972213)
[»] scaffold0130 (1 HSPs)
scaffold0130 (14-461)||(37456-37903)
[»] chr2 (5 HSPs)
chr2 (14-461)||(23201519-23201966)
chr2 (14-461)||(23675360-23675807)
chr2 (14-461)||(22637172-22637619)
chr2 (42-461)||(24910750-24911169)
chr2 (54-393)||(23815826-23816166)
[»] chr4 (3 HSPs)
chr4 (30-461)||(13290276-13290707)
chr4 (30-461)||(14773476-14773907)
chr4 (54-424)||(18564735-18565105)
[»] scaffold0040 (1 HSPs)
scaffold0040 (14-461)||(28525-28972)
[»] chr5 (2 HSPs)
chr5 (30-461)||(21509844-21510275)
chr5 (227-461)||(26271951-26272184)
[»] chr6 (4 HSPs)
chr6 (14-461)||(19036070-19036516)
chr6 (14-461)||(23433952-23434400)
chr6 (35-461)||(1552080-1552506)
chr6 (349-461)||(16211840-16211952)
[»] scaffold0108 (1 HSPs)
scaffold0108 (18-461)||(25062-25505)
[»] scaffold0005 (1 HSPs)
scaffold0005 (30-461)||(65823-66254)
[»] scaffold0026 (1 HSPs)
scaffold0026 (30-461)||(139871-140302)
[»] scaffold0001 (1 HSPs)
scaffold0001 (30-457)||(127628-128058)
[»] scaffold0022 (1 HSPs)
scaffold0022 (78-457)||(16254-16633)
[»] scaffold0064 (1 HSPs)
scaffold0064 (18-461)||(38490-38933)
[»] scaffold0023 (2 HSPs)
scaffold0023 (64-459)||(64188-64583)
scaffold0023 (64-459)||(73366-73761)
[»] scaffold0656 (1 HSPs)
scaffold0656 (35-461)||(3896-4322)
[»] scaffold0282 (1 HSPs)
scaffold0282 (18-461)||(6435-6878)
[»] scaffold0080 (1 HSPs)
scaffold0080 (111-461)||(4428-4778)
[»] scaffold0241 (1 HSPs)
scaffold0241 (30-310)||(10479-10759)
[»] scaffold0019 (1 HSPs)
scaffold0019 (35-461)||(159979-160406)
[»] scaffold0423 (1 HSPs)
scaffold0423 (30-461)||(3957-4388)
[»] scaffold0053 (1 HSPs)
scaffold0053 (35-459)||(43193-43617)
[»] scaffold0013 (4 HSPs)
scaffold0013 (35-461)||(147686-148112)
scaffold0013 (35-461)||(146646-147073)
scaffold0013 (35-458)||(82638-83062)
scaffold0013 (35-458)||(120310-120734)
[»] scaffold0016 (1 HSPs)
scaffold0016 (41-461)||(180225-180643)
[»] scaffold0362 (2 HSPs)
scaffold0362 (36-257)||(13498-13719)
scaffold0362 (284-461)||(13324-13501)
[»] scaffold0319 (3 HSPs)
scaffold0319 (18-198)||(10774-10954)
scaffold0319 (18-148)||(8807-8937)
scaffold0319 (402-461)||(8741-8800)
[»] scaffold0029 (1 HSPs)
scaffold0029 (54-414)||(68600-68960)
[»] scaffold0046 (2 HSPs)
scaffold0046 (275-461)||(32605-32791)
scaffold0046 (35-114)||(32786-32865)
[»] scaffold1611 (1 HSPs)
scaffold1611 (54-283)||(706-935)
[»] scaffold0008 (1 HSPs)
scaffold0008 (71-424)||(134533-134886)
[»] scaffold0507 (1 HSPs)
scaffold0507 (56-130)||(11790-11864)
[»] scaffold0577 (1 HSPs)
scaffold0577 (36-121)||(6580-6665)
[»] scaffold0740 (1 HSPs)
scaffold0740 (401-460)||(402-461)
[»] scaffold1388 (1 HSPs)
scaffold1388 (55-117)||(493-555)
[»] scaffold0183 (1 HSPs)
scaffold0183 (57-152)||(15507-15602)
[»] scaffold0401 (1 HSPs)
scaffold0401 (204-292)||(1671-1759)


Alignment Details
Target: chr3 (Bit Score: 380; Significance: 0; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 14694119 - 14694566
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  14694119 gacatcaggcttgcttgttgctttagccttttctccgaatttcagtcttccttcatcgagagctttctgcatagaatccctgaaacgagtacaacgggat 14694218  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14694219 aagttatggcccaaaaaaccatgaaattttcaaaaaccccttttcttcctctgatccagagggggaattttcatattatctggcactaaaattatgccat 14694318  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    |||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14694319 cagcaactaaaagatcgaatatttcttcacacttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgtttttccc 14694418  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14694419 gtttgatggccttaataatttacaagtgtaaggcggcccatcttttaattccgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 14694518  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  14694519 tctggctcactttccccagtttcgatataagcaactttttctttctta 14694566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 13307768 - 13308215
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||    
T  13307768 gacatcaggcttatttgttgctttagccttttctccgaatttcaatcttccttcatcgagagctttctgcacagaatccctaaaacgagtgcaacgggat 13307867  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| || | |||||||||||| |||| ||||||||||||||    
T  13307868 aagttatggcccaaaaaaccatgaaatttacaaaaaccccttttctttctctgatctagaggagggagtttcatattatccggcactaaaattatgccat 13307967  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  13307968 cagcaactaaaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctgcgtttttccc 13308067  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||||||||| |||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| ||||||| ||||||||| ||||||||||||||    
T  13308068 atttgatggcctcaataatttgcaagtgtaaggcggcccatcttttaattctgcgagatttatttcgttatcttctacagaatcggaaccccaatcgaat 13308167  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  13308168 tctggctcactatccctagtatcgatataagcaactttctctttctta 13308215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 14 - 461
Target Start/End: Complemental strand, 10150089 - 10149642
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||| |||    
T  10150089 gacatcaggcttagttgttactttagccttttctccgaatttcagtcttccttcatcaagagccttctgcacagaatccctgaaacgagtgcaacgggat 10149990  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||||||||||| ||||||||||||||    
T  10149989 aagttatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccat 10149890  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  10149889 cagcaactagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcattttttggttcttctacgtttttccc 10149790  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     |||||||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||||||||  | ||||||||||||    
T  10149789 atttgatggccttaacaatttacaagtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcttctacagaatctgatccccaatcgaat 10149690  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||| | ||| |||||||||||||||||||||||||||    
T  10149689 tctggctcactatctctagtatcgatataagcaactttctctttctta 10149642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 57 - 461
Target Start/End: Complemental strand, 10781435 - 10781031
Alignment:
Q  57 agccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctcttt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10781435 agccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgggataagttatggcccaaaaaaccatgaaatttacaaaaacctcttt 10781336  T
Q  157 tcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatacatc 256  Q
    |||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  10781335 tcttcctctggtcaagaggaggaattttcatattatctggcactaaaattatgccatcagcaactaaaagatcaaatatttcttcgcttttagatacatc 10781236  T
Q  257 aaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatct 356  Q
    ||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| |||    
T  10781235 aaacgtataagtttttgagggatatttataatttttgggctcttctacgttttttccgtttgatggccttaacaatttgcaagtgtaaggcggcccttct 10781136  T
Q  357 tttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaactttctctt 456  Q
    ||||| |  |||||||||| |||||| || || || |||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||    
T  10781135 tttaactccgcgagatttatttcgctgtcctcaacggaatcgaaaccccaatcgaattctggctcactatccccagtttcgatgtaaccaactttttctt 10781036  T
Q  457 tctta 461  Q
    |||||    
T  10781035 tctta 10781031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 7402879 - 7403082
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  7402879 gacatcaggtttgcttgttgctttaaccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtacaacgggat 7402978  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  7402979 aagttatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgatccagagggggaattttcatattatctggcaccaaaattatgccat 7403078  T
Q  214 cagc 217  Q
    ||||    
T  7403079 cagc 7403082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 15201579 - 15201461
Alignment:
Q  45 tctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttac 144  Q
    ||||| || ||||||||||||||||| || ||||| ||||| ||||||||||||     ||||||||||  ||||||||| |||  |||||| ||||| |    
T  15201579 tctccaaacttcagccttccttcatctagtgctttttgcactgaatccctgaaaaccacacaacgagatgtgttatggccaaaattaccatggaatttgc 15201480  T
Q  145 aaaaacctcttttcttcct 163  Q
    || | |||||||| |||||    
T  15201479 aatatcctctttttttcct 15201461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 15240782 - 15240664
Alignment:
Q  45 tctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttac 144  Q
    ||||| || ||||||||||||||||| || ||||| ||||| ||||||||||||     |||| |||||  ||||||||| |||  |||||| ||||| |    
T  15240782 tctccaaacttcagccttccttcatctagtgctttttgcactgaatccctgaaaaccacacaaagagatgtgttatggccaaaattaccatggaatttgc 15240683  T
Q  145 aaaaacctcttttcttcct 163  Q
    || | |||||||| |||||    
T  15240682 aatatcctctttttttcct 15240664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 15 - 461
Target Start/End: Original strand, 18134429 - 18134875
Alignment:
Q  15 acatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagata 114  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  18134429 acatcaggcttgcttgttgctttagccttttccccaaatttcagccttccttcatcgagagctttctgcacagaatccctgaaatgagtacaacgggata 18134528  T
Q  115 agttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatc 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  18134529 agttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggtattttcatattatctggcactaaaattacgccatc 18134628  T
Q  215 agcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccg 314  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  18134629 agcaactaaaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttggactcttctacgttttttccg 18134728  T
Q  315 tttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaatt 414  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |    
T  18134729 tttgatggccttaacaatttacaagtgtaaggcggcccatcttttaatttcgcgagatttacttcgctatcctcgacggaatcgaaaccccaatcgaact 18134828  T
Q  415 ctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||    
T  18134829 ctggctcactatccccagcttcgatataagcaactttttctttctta 18134875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 14343549 - 14343996
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  14343549 gacatcaggcttgtttgttgctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtacaacgggat 14343648  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  14343649 aagttatggcccaaaaaaccatgaaatttgcaaaaaccctttttcttcctctgatccagagggggaactttcatattatctggcactaaaattatgccat 14343748  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  14343749 cagcaactaaaagatcaaatatttcttcacatttagacacatcaaaagtataagttttggggggatatttatcatttttgggctcttctacgttttttcc 14343848  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
    ||||||||||||||| | |||||||||||||||  |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  14343849 gtttgatggccttaacattttacaagtgtaaggtggcccatcttttaattccgcgagatttatttcgctatcttcgacagaatcgaaaccccaatcgaat 14343948  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  14343949 tctggttcactatccccagtttcgatataagcaactttttctttctta 14343996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 18172526 - 18172973
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||    
T  18172526 gacatcaggcttagttgttgctttagccttttctccgaatttcagccttccttcatcgagagccttctgcacagaatccctgaaacaagtgcaacgggat 18172625  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||||||||||| ||||||||||||||    
T  18172626 aagttatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccat 18172725  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    ||| |||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||    
T  18172726 cagaaactagaagatcaaatatttcttcacatttagacacatcaaaagtataagttttcgggggatacttatcatttttgggttcttctacgttttttcc 18172825  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||||||||| |||||||| |||||||||||| |||||||||| |||| ||| ||||||| |||| ||||||| ||||||||  ||||||||||||||    
T  18172826 atttgatggcctcaataatttgcaagtgtaaggcggcccatctttcaattctgcaagatttatttcgttatcttctacagaatctgaaccccaatcgaat 18172925  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  18172926 tctggctcactatcctcagtatcgatataagcaactttctctttctta 18172973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 35 - 461
Target Start/End: Complemental strand, 15764295 - 15763869
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  15764295 tttagacttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgtgtgcaacgggataagttatgtcccaaaaaacca 15764196  T
Q  135 tgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaata 234  Q
    || ||||||||||||||||| ||||||||||| |||||||  |||| |||||| || ||||||| || |||||||||||||| |||||  |||||||| |    
T  15764195 tggaatttacaaaaacctctcttcttcctctgttccagagaaggaagtttcatgttgtctggcactagaattatgccatcagtaactagaagatcaaaaa 15764096  T
Q  235 tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataattt 334  Q
    | |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| || |||||||  ||||| || ||  ||||||||| ||| ||    
T  15764095 tctcttcacatttagatacatcaaaactatatgtttttgggggatacttatcatttttaggttcttctatattttttccattcaatggccttagtaactt 15763996  T
Q  335 acaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtt 434  Q
    |||||| |||||| | ||||||||||||| |||||||||||||||| |||| || ||||||||  | ||||||||||||||||| |||||||| |||||     
T  15763995 acaagtataaggcggtccatcttttaattctgcgagatttacttcgttatcctcaacagaatctgatccccaatcgaattctggctcactatctccagta 15763896  T
Q  435 tcgatataagcaactttctctttctta 461  Q
    ||||||||||||| ||| |||||||||    
T  15763895 tcgatataagcaattttttctttctta 15763869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 41 - 461
Target Start/End: Original strand, 11977840 - 11978260
Alignment:
Q  41 cttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaat 140  Q
    ||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  11977840 cttttctccaaatttcagccttcccttatcgagagccttctgcacagaatccctgaaacgagtacaacgggataagttatgtcccaaaaaaccatggaat 11977939  T
Q  141 ttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttctt 240  Q
    |||||||||||||| || ||||| || || ||||| |||| |||||| |||  ||||| || |||||||||||||| |||||  |||||||| || ||||    
T  11977940 ttacaaaaacctctctttttcctttgttctagaggaggaagtttcatgttacttggcactagaattatgccatcagtaactagaagatcaaaaatctctt 11978039  T
Q  241 cacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagt 340  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |  ||||| || ||||||| ||||| ||| ||||||||    
T  11978040 cacatttagatacatcaaaagtatatgttttcgggggatatttatcatttttaggttcttccagattttttccatttgatgaccttagtaacttacaagt 11978139  T
Q  341 gtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgata 440  Q
     |||| | ||||||||||||||| ||| ||||||| |||| |||| || ||||| ||  | ||||||||||||||||| |||||||| | ||| ||||||    
T  11978140 ataagccggcccatcttttaattctgcaagatttatttcgttatcatcaacagactcagatccccaatcgaattctggatcactatctcgagtatcgata 11978239  T
Q  441 taagcaactttctctttctta 461  Q
    |||||||| || |||||||||    
T  11978240 taagcaaccttttctttctta 11978260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 18452991 - 18452888
Alignment:
Q  51 aatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaac 150  Q
    ||||||| ||| |||||||| || ||||||||||| || ||||| ||| |   ||||||||||  ||||||||| || |||||||||||||||||||| |    
T  18452991 aatttcaacctgccttcatcaagtgctttctgcactgagtccctaaaaagtacacaacgagatgtgttatggcctaagaaaccatgaaatttacaaaatc 18452892  T
Q  151 ctct 154  Q
    ||||    
T  18452891 ctct 18452888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 336; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 41381216 - 41381663
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||    
T  41381216 gacattagacttgcttgctgctttagccttttctccgaatttcagccttccttcatcgagagctttctacacagaatcccttaaacgagtacaacgggat 41381315  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  41381316 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctggtccagagggggaattttcatattatctggcactaaaattatgccat 41381415  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
     ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41381416 tagcaactaaaagatcaaatatttcttcgcatttagatacatcaaaagtataagtttttgggggatatttatcgtttttgggctcttctacatttttccc 41381515  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
    ||||||| |||||||||||||  ||||||||||| |||| |||||||| |  |||||||||||||||||||| || || |||| ||||||||||||||||    
T  41381516 gtttgattgccttaataatttgaaagtgtaaggcggcccctcttttaactccgcgagatttacttcgctatcctcaacggaattgaaaccccaatcgaat 41381615  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  41381616 tctggctcactatccccagtttcgatgtaagcaactttatctttctta 41381663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 461
Target Start/End: Original strand, 22806734 - 22807177
Alignment:
Q  18 tcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagt 117  Q
    ||||||||| | |||  ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  22806734 tcaggcttggtagttattttagccttttctccaaatttcagtctgccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagt 22806833  T
Q  118 tatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagc 217  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||| |||||| || ||||||| ||||||||||||||||||    
T  22806834 tatgtcccaaaaaaccatgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagc 22806933  T
Q  218 aactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgttt 317  Q
    |||||  ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |  |||||||||||||| || |||    
T  22806934 aactagaagatcaaatatttcttcacatttggatacatcgaaagtataagttttcgggggatatttatcatttttagattcttctacgttttttccattt 22807033  T
Q  318 gatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctg 417  Q
    |||||||||||||| |||||||| |||||  |||||||||| |||| ||| ||||||| |||| ||||||| ||||||||| | ||||||||||||| ||    
T  22807034 gatggccttaataacttacaagtataaggtggcccatctttcaattctgcaagatttatttcgttatcttcaacagaatcggatccccaatcgaattttg 22807133  T
Q  418 gttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    | |||||||| ||||| |||| |||||| ||||| |||||||||    
T  22807134 gctcactatctccagtatcgacataagcgactttttctttctta 22807177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 42 - 461
Target Start/End: Original strand, 21166069 - 21166488
Alignment:
Q  42 ttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatt 141  Q
    |||||||| || |||| |||||| ||||||||||| || || |||||||||||||||||||||||| ||||||| ||||| || |||| |||||||||||    
T  21166069 ttttctccaaacttcaaccttccctcatcgagagccttatgtacagaatccctgaaacgagtacaaagagataaattatgccctaaaacaccatgaaatt 21166168  T
Q  142 tacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttc 241  Q
    | || || ||||| || |||||  | || | ||| || | ||||||||| ||||||| || ||||||||||||||  ||||| ||||| || || |||||    
T  21166169 tgcagaatcctctctttttccttcgttcaaaaggaggcagtttcatattctctggcactagaattatgccatcagtgactaaaagatcgaagatctcttc 21166268  T
Q  242 acatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtg 341  Q
    ||||||||| |||||||| ||||| ||||| || |||||||| |||||||| || |||||   |||||| || |||||||||||||||||||| || ||     
T  21166269 acatttagaaacatcaaaggtatatgttttcggaggatatttgtcatttttaggttcttcatggtttttgccatttgatggccttaataatttgcaggta 21166368  T
Q  342 taaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatat 441  Q
    |||||  ||||||||||||||| ||||||||||| |||  |||||||||||| |||  | ||||||||||||||||| ||||| || || || || | ||    
T  21166369 taaggtggcccatcttttaattctgcgagatttatttcattatcttcgacagtatctgacccccaatcgaattctggatcactgtctccggtatccacat 21166468  T
Q  442 aagcaactttctctttctta 461  Q
    | ||||||||||| ||||||    
T  21166469 aggcaactttctccttctta 21166488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 331; Significance: 0; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 14 - 460
Target Start/End: Original strand, 17423747 - 17424193
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  17423747 gacatcaggcttgtttgttgctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtacaacgggat 17423846  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| || | ||||||||||||||||| ||||||||||||||    
T  17423847 aagttatggcccaaaaaaccatgaaatttacaaaaaccccttttcttcctcagatctagaggagggagtttcatattatctggcactaaaattatgccat 17423946  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17423947 cagcaactaaaagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttgtcatttttgggctcttctacgtttttccc 17424046  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
    |||||||||||| |||||||| ||| |||||||| ||| ||| ||||||| ||||||||||| ||||||||| || ||||||| |  |||||||||||||    
T  17424047 gtttgatggcctcaataatttgcaaatgtaaggcggcctatcctttaattctgcgagatttatttcgctatcctctacagaattgtgaccccaatcgaat 17424146  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctt 460  Q
    | |||||||||||||||||| ||||||||||||||||| ||||||||    
T  17424147 tttggttcactatccccagtatcgatataagcaactttttctttctt 17424193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 35 - 461
Target Start/End: Original strand, 22349678 - 22350104
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  22349678 tttagccttttctcctaattttagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaacca 22349777  T
Q  135 tgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaata 234  Q
    |||||||||||||||||||| ||||||||||| |  ||||| |||| |||||| || ||||||| |||||||||||||||||||||||  ||||||||||    
T  22349778 tgaaatttacaaaaacctctcttcttcctctgttttagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactaggagatcaaata 22349877  T
Q  235 tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataattt 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||||||| ||    
T  22349878 tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttggactcttctacgttttttccattttatggccttaataactt 22349977  T
Q  335 acaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtt 434  Q
    |||||| |||||| ||||||||||||||| ||| |||||||  ||| ||||||| ||||||||  | ||||||||||||||||| |||||||| |||||     
T  22349978 acaagtataaggcggcccatcttttaattctgcaagatttatctcgttatcttcaacagaatctgatccccaatcgaattctggctcactatctccagta 22350077  T
Q  435 tcgatataagcaactttctctttctta 461  Q
    ||||||||||||||||| |||||||||    
T  22350078 tcgatataagcaactttttctttctta 22350104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 92 - 461
Target Start/End: Complemental strand, 22066984 - 22066615
Alignment:
Q  92 cctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatatta 191  Q
    |||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || |||||||| || ||||| |||| |||||| |||    
T  22066984 cctgaaacgagtacaacgggataagttatgtcctaaaaaaccatggaatttacaaaaacctctctttttcctctgctctagaggaggaagtttcatgtta 22066885  T
Q  192 tctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttt 291  Q
      ||||| || |||||||||||||| |||||  |||||||| || ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  22066884 cttggcactagaattatgccatcagtaactagaagatcaaaaatctcttcacatttagatacatcaaaagtatatgttatcgggggatatttatcatttt 22066785  T
Q  292 tgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgac 391  Q
    | || |||||||  ||||| || ||||||||||||| ||| |||||||| |||||  ||||||||||||||| ||||||||||| |||| |||| || ||    
T  22066784 taggttcttctagattttttccatttgatggccttagtaacttacaagtataaggtggcccatcttttaattctgcgagatttatttcgttatcatcaac 22066685  T
Q  392 agaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||| |   | ||||||||||||||||| |||||||| ||||| || |||||||||||  | |||||||||    
T  22066684 agatttagatccccaatcgaattctggatcactatctccagtatctatataagcaaccatttctttctta 22066615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 65 - 424
Target Start/End: Complemental strand, 15913387 - 15913028
Alignment:
Q  65 ttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctc 164  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||| || |||||||| || |||||||||||||||||||| ||||| || |||||     
T  15913387 ttcatcgagagctttctacacagaatcctttaaacgagtacaacgagacaaattatggcctaagaaaccatgaaatttacaaaatcctctctttttcctt 15913288  T
Q  165 tgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtat 264  Q
    || || | ||| || |  || | ||| |  || | ||| ||||||||||||||||| || |||||||| ||||| || || ||||| ||||||||  |||    
T  15913287 tgctctaaaggaggcaactttagatttttaggaactaatattatgccatcagcaaccaaaagatcaaagatttcctcgcacttagaaacatcaaagatat 15913188  T
Q  265 aagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattt 364  Q
    | ||||| || || ||||| ||||| || || |||||    ||||| || || ||||||||||| | |||||| |  ||| |  |||||||||||||||     
T  15913187 atgttttaggagggtatttgtcattctttggttcttcaggattttttccattcgatggccttaacagtttacatgcataaagaggcccatcttttaattc 15913088  T
Q  365 tgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcact 424  Q
    ||||||||| |  ||  |||||||||||| |||  | ||| |||||||||| || |||||    
T  15913087 tgcgagattaatctcattatcttcgacagtatctgatccctaatcgaattcaggatcact 15913028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 24972109 - 24972213
Alignment:
Q  45 tctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttac 144  Q
    |||||||||||||||||||||||||| || ||||| ||||| |||||| |||||  |  |||| ||||   ||||||||  ||| |||||||||||||||    
T  24972109 tctccgaatttcagccttccttcatcaagtgctttttgcactgaatccttgaaagaaacacaatgagaagtgttatggcataaataaccatgaaatttac 24972208  T
Q  145 aaaaa 149  Q
    |||||    
T  24972209 aaaaa 24972213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 14 - 461
Target Start/End: Complemental strand, 37903 - 37456
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||    
T  37903 gacatcaggcttagttgttgctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacataatccctgaaacaagtgcaacgagat 37804  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||||||||||| ||||||||||||||    
T  37803 aagttatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccat 37704  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    ||| |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37703 cagaaactagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgtttttccc 37604  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||||||||| |||||||| |||||||||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||  ||||  ||||||||||||||    
T  37603 atttgatggcctcaataatttgcaagtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcttctactaaatctgaaccccaatcgaat 37504  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||||||| | ||||||||||||| |||||||||||||    
T  37503 tctggctcactatccccaatatcgatataagcaagtttctctttctta 37456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 23201519 - 23201966
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  23201519 gacatcaggcttagttgttgctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggat 23201618  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||| || |||| ||||||||||||||    
T  23201619 aagttatggcccaaaaaaccatgaaattttcaaaaaccccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgccat 23201718  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    ||| |||||  |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  23201719 cagaaactagaagatcaaatatttcttcacatttagacacataaaaagtataagtttttaggggatatttatcatttttgggttcttctacgtttttccc 23201818  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||||||||| || ||||| |||||||||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||||||||  ||||||||||||||    
T  23201819 atttgatggcctcaacaatttgcaagtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcttctacagaatctgaaccccaatcgaat 23201918  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  23201919 tctggctcactatccccagtatcgatataagcaactttctctttctta 23201966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 23675360 - 23675807
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  23675360 gacatcaggcttagttgttgctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggat 23675459  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||| || |||| ||||||||||||||    
T  23675460 aagttatggcccaaaaaaccatgaaattttcaaaaaccccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgccat 23675559  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    ||| |||||  |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  23675560 cagaaactagaagatcaaatatttcttcacatttagacacataaaaagtataagtttttaggggatatttatcatttttgggttcttctacgtttttccc 23675659  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||||||||| || ||||| |||||||||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||||||||  ||||||||||||||    
T  23675660 atttgatggcctcaacaatttgcaagtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcttctacagaatctgaaccccaatcgaat 23675759  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  23675760 tctggctcactatccccagtatcgatataagcaactttctctttctta 23675807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 14 - 461
Target Start/End: Complemental strand, 22637619 - 22637172
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||| ||||  |||||| |||||| ||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||  ||    
T  22637619 gacatcaagcttagttgttgttttagcttttactctgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacggaat 22637520  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||| || | ||||||||| || |||| ||||||||||||||    
T  22637519 aagttatggcccaaaaaaccatgaaatttgcaaaaatcccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgccat 22637420  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    ||| |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22637419 cagaaactagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgtttttccc 22637320  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||||||||| |||||||| |||||||||||| ||||||||||||||| | | ||||||| |||| ||||||| ||||||||  ||||||||||||||    
T  22637319 atttgatggcctcaataatttgcaagtgtaaggcggcccatcttttaattctacaagatttatttcgttatcttctacagaatctgaaccccaatcgaat 22637220  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||| | |||||||||||||| |||||||||||||||||||||||||||    
T  22637219 tctagctcactatccccagtatcgatataagcaactttctctttctta 22637172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 42 - 461
Target Start/End: Complemental strand, 24911169 - 24910750
Alignment:
Q  42 ttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatt 141  Q
    |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||    
T  24911169 ttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgtgataagttatgtcccaaaaaaccatgatatt 24911070  T
Q  142 tacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttc 241  Q
    ||||||||| ||| ||||||||||| |||||||| |||| |||||| || ||||||| || ||||||||||||||  ||||  |||||||| || |||||    
T  24911069 tacaaaaacatctcttcttcctctgttccagaggaggaagtttcatgttgtctggcactagaattatgccatcagtcactagaagatcaaaaatctcttc 24910970  T
Q  242 acatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtg 341  Q
    ||||||||||||||| ||||| || ||||| ||| |||| ||||||||||| || || ||||  ||||| || ||||||||||||| ||| ||||||||     
T  24910969 acatttagatacatcgaaagtgtatgttttcgggtgatacttatcatttttaggttcctctatattttttccatttgatggccttagtaacttacaagta 24910870  T
Q  342 taaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatat 441  Q
    |||||| |||||||||||||||  |||||||||| |||| |||| || ||||||||  | ||||||||||||||||| |||||||| ||||| |||| ||    
T  24910869 taaggcggcccatcttttaattccgcgagatttatttcgttatcctcaacagaatctgatccccaatcgaattctggctcactatctccagtatcgacat 24910770  T
Q  442 aagcaactttctctttctta 461  Q
    |||||||||| |||||||||    
T  24910769 aagcaactttttctttctta 24910750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 54 - 393
Target Start/End: Complemental strand, 23816166 - 23815826
Alignment:
Q  54 ttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctc 153  Q
    |||| |||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||    
T  23816166 ttcaaccttccctcatcgagagccttatgcacagaatccctgaaacaagtacaacgagataagttatggcctaaaaacccatggaatttacaaaatcctc 23816067  T
Q  154 ttttcttcctctgatccagagggggaattttcat-attatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagata 252  Q
    | || ||||| || || | | | || | ||||||  || | ||||| |||||||||||||||||  ||||| ||||| || || |||||||||||||| |    
T  23816066 tctttttcctttgttctaaatgaggtaatttcatgtttttttggcattaaaattatgccatcagtgactaagagatcgaagatctcttcacatttagaaa 23815967  T
Q  253 catcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagccc 352  Q
    |||| |||||||| |||||  | |||||||| || ||||| || |||||    ||||| || || |||||||||| |||||| ||||  || ||| | ||    
T  23815966 catcgaaagtatatgttttaagaggatatttgtcgtttttaggttcttcaggattttttccattcgatggccttagtaatttgcaagcatagggcggtcc 23815867  T
Q  353 atcttttaattttgcgagatttacttcgctatcttcgacag 393  Q
    ||||||||||| | | ||||| |||||  ||||||||||||    
T  23815866 atcttttaattctacaagattaacttcattatcttcgacag 23815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 296; Significance: 1e-166; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 30 - 461
Target Start/End: Original strand, 13290276 - 13290707
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa 129  Q
    |||| ||||||||||||||| ||||||||  |||||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  13290276 gttgttttagccttttctccaaatttcagtgttccttcatcgagagccttctacacagaatccctgaaacgagtgcaacgggataagttatggcccaaaa 13290375  T
Q  130 aaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatc 229  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||||||||||| ||||||||||||||||| |||||  |||||    
T  13290376 aaccatgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaactagaagatc 13290475  T
Q  230 aaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaat 329  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||    
T  13290476 aaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgtttttcccatttgatggcctcaat 13290575  T
Q  330 aatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccc 429  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||| |||| |||| ||  |||||||  |||||||||||||||||||||||||||| |    
T  13290576 aatttacaagtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcctctccagaatctgaaccccaatcgaattctggttcactatctc 13290675  T
Q  430 cagtttcgatataagcaactttctctttctta 461  Q
    |||| |||||||||||||||||||||||||||    
T  13290676 cagtatcgatataagcaactttctctttctta 13290707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 30 - 461
Target Start/End: Original strand, 14773476 - 14773907
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa 129  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  14773476 gttgttttagccttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaa 14773575  T
Q  130 aaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatc 229  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||| |||| |||||| || ||||||| |||||||||||||||||||||||  |||||    
T  14773576 aaccatgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactagaagatc 14773675  T
Q  230 aaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaat 329  Q
    |||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||||  |||||||||||||| || |||||||||||||||    
T  14773676 aaatatttcttcacatttggatacatcgaaagtataaattttcgggggatatttatcatttttggattcttctacgttttttccatttgatggccttaat 14773775  T
Q  330 aatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccc 429  Q
    || |||||||| |||||  ||||||| || |||| ||| ||||||| |||| ||||||| ||||||||| | ||||||||||||||||| |||||||| |    
T  14773776 aagttacaagtataaggtggcccatccttcaattctgcaagatttatttcgttatcttcaacagaatcggatccccaatcgaattctggctcactatctc 14773875  T
Q  430 cagtttcgatataagcaactttctctttctta 461  Q
    |||| |||| |||||| ||||| |||||||||    
T  14773876 cagtatcgacataagcgactttttctttctta 14773907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 54 - 424
Target Start/End: Original strand, 18564735 - 18565105
Alignment:
Q  54 ttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctc 153  Q
    |||| |||||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||  ||||||||||| ||||    
T  18564735 ttcaaccttccctcattgagagacttctgcacagaatccctgaaacgagtacaacgagataagttatgtcctaaaaacccatagaatttacaaaatcctc 18564834  T
Q  154 ttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatac 253  Q
    | || ||||| || || | ||| || | |||||| || | ||||| |||||||||||||| ||  ||| | | ||| || || |||||||||||||| ||    
T  18564835 tctttttcctttgttctaaaggaggcaatttcatgttctttggcactaaaattatgccatgagtgactcaaaaatcgaagatctcttcacatttagaaac 18564934  T
Q  254 atcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagccca 353  Q
    ||| |||||||| ||||| || |||||||| |||||||| || |||||    ||||| || || |||||||||| |||||| || |  ||  || | |||    
T  18564935 atcgaaagtatatgttttaggaggatatttgtcatttttaggttcttcaggattttttccattcgatggccttagtaatttgcaggcatagagcggtcca 18565034  T
Q  354 tcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcact 424  Q
    |||||||||| ||| ||||||| |||  |||||||||||| |||  | ||||||||||||||||| |||||    
T  18565035 tcttttaattctgcaagatttatttcattatcttcgacagtatctgacccccaatcgaattctgggtcact 18565105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 14 - 461
Target Start/End: Complemental strand, 28972 - 28525
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||   |||||||||||||||||||| ||||  |||    
T  28972 gacatcaggcttaattgttgctttagccttttctccgaatttcagtcttccttcatcgagagccttcaagacagaatccctgaaacgagtgcaacaggat 28873  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    || |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||| || | ||| ||||||||||||| ||| ||||||||||    
T  28872 aaattatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcttctgatctagaggagggagttttatattatctggcactaagattatgccat 28773  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    |||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28772 cagcaactagaagatcaaatatctcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgtttttccc 28673  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||||||||  ||||||||||||||    
T  28672 atttgatggcctcaataatttacaagtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcttctacagaatctgaaccccaatcgaat 28573  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  28572 tctggctcactatctccagtatcgatataagcaactttctctttctta 28525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 292; Significance: 1e-164; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 30 - 461
Target Start/End: Complemental strand, 21510275 - 21509844
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa 129  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  21510275 gttgctttagccttttctccgaattttagtcttccttcatcgagagccttctgcatagaatccctgaaacgagtgcaacgggataagttatggcccaaaa 21510176  T
Q  130 aaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatc 229  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||| || | |||||| || ||||||| |||||||||||||||||| ||||  |||||    
T  21510175 aaccatgaaatttacaaaaacctctcttcttcctctgttctagaggagggagtttcatgttttctggcactaaaattatgccatcagctactagaagatc 21510076  T
Q  230 aaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaat 329  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21510075 aaatatttcttcacatttagatacatcaaaggtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccatttgatggccttaat 21509976  T
Q  330 aatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccc 429  Q
    ||||||||||||||| || ||||||||||||||| ||| |||||||  ||| ||||||| ||||||||  ||||||||||||||||||| || ||||| |    
T  21509975 aatttacaagtgtaaagcggcccatcttttaattctgcaagatttatctcgttatcttcaacagaatctgaaccccaatcgaattctggctcgctatctc 21509876  T
Q  430 cagtttcgatataagcaactttctctttctta 461  Q
    |||| ||||||||||||||||| |||||||||    
T  21509875 cagtatcgatataagcaactttttctttctta 21509844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 227 - 461
Target Start/End: Original strand, 26271951 - 26272184
Alignment:
Q  227 atcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggcctt 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||     
T  26271951 atcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatc-tttttgggctcttctacgtttttcccatttgatggcctc 26272049  T
Q  327 aataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactat 426  Q
    || |||||||||||||||||| |||||||||||| || ||| |||||||  ||| |||| || | ||||||  ||||||||||||||||||| || ||||    
T  26272050 aacaatttacaagtgtaaggcggcccatcttttagttctgcaagatttatctcgttatcctcaatagaatctgaaccccaatcgaattctggctcgctat 26272149  T
Q  427 ccccagtttcgatataagcaactttctctttctta 461  Q
    | ||||| ||||||||||||||||| |||||||||    
T  26272150 ctccagtatcgatataagcaactttttctttctta 26272184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 19036070 - 19036516
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  19036070 gacatcaggtttagttgttgctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggat 19036169  T
Q  114 aagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccat 213  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||  |||| || | ||||||||| ||||||| ||||||||||||||    
T  19036170 aagttatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgttctggaggagggagtttcatattttctggcactaaaattatgccat 19036269  T
Q  214 cagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttccc 313  Q
    |||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19036270 cagcaactagaagatcaaatatttcttcacatttagacacattaaaagtataagtttttgggggatatttatcatttttgggttcttctacatttttccc 19036369  T
Q  314 gtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaat 413  Q
     ||||| |||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||||||||  | ||||||||||||    
T  19036370 atttga-ggccttaacaatttacaagtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcttctacagaatctgatccccaatcgaat 19036468  T
Q  414 tctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||| |||||||| ||||| || |||||||||| |||||||||||||    
T  19036469 tctggctcactatctccagtatctatataagcaaatttctctttctta 19036516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 14 - 461
Target Start/End: Complemental strand, 23434400 - 23433952
Alignment:
Q  14 gacatcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagat 113  Q
    ||||||||||||  |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  23434400 gacatcaggcttagttgttgctttagccttctctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggat 23434301  T
Q  114 aagttatggcccaaaaaa--ccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgcc 211  Q
    |||||||| |||||||||  ||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||| || |||| ||||||||||||    
T  23434300 aagttatgtcccaaaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgcc 23434201  T
Q  212 atcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttc 311  Q
    ||||  |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23434200 atcataaactagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgtttttc 23434101  T
Q  312 ccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcga 411  Q
    || ||||||||||| |||||||| |||||| ||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||| ||||  ||||||||||||    
T  23434100 ccatttgatggcctcaataatttgcaagtgaaaggcggcccatcttttaattctgcaagatttatttcgttatcttctacataatctgaaccccaatcga 23434001  T
Q  412 attctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    ||||||| ||||||| |||||| || ||||||||||||||||||||||||    
T  23434000 attctggctcactat-cccagtatcaatataagcaactttctctttctta 23433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 35 - 461
Target Start/End: Original strand, 1552080 - 1552506
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  1552080 tttagacttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgtgtgcaacgggataagttatgtcccaaaaaacca 1552179  T
Q  135 tgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaata 234  Q
    || ||||||||||||||||| ||||||||||| |||||||  |||| |||||| || ||||||| || |||||||||||||| |||||  |||||||| |    
T  1552180 tggaatttacaaaaacctctcttcttcctctgttccagagaaggaagtttcatgttgtctggcactagaattatgccatcagtaactagaagatcaaaaa 1552279  T
Q  235 tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataattt 334  Q
    | |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| || |||||||  ||||| || ||  ||||||||| ||| ||    
T  1552280 tctcttcacatttagatacatcaaaactatatgtttttgggggatacttatcatttttaggttcttctatattttttccattcaatggccttagtaactt 1552379  T
Q  335 acaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtt 434  Q
    |||||| |||||| | ||||||||||||| |||||||||||||||| |||| || ||||||||  | ||||||||||||||||| |||||||| |||||     
T  1552380 acaagtataaggcggtccatcttttaattctgcgagatttacttcgttatcctcaacagaatctgatccccaatcgaattctggctcactatctccagta 1552479  T
Q  435 tcgatataagcaactttctctttctta 461  Q
    ||||||||||||| ||| |||||||||    
T  1552480 tcgatataagcaattttttctttctta 1552506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 461
Target Start/End: Complemental strand, 16211952 - 16211840
Alignment:
Q  349 gcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaac 448  Q
    ||||||| ||||||| ||||||||||| |||| | ||||| ||||||||  | ||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  16211952 gcccatcctttaattctgcgagatttatttcgttttcttcaacagaatctgatccccaatcgaattctggctcactatctccagtatcgatataagcaac 16211853  T
Q  449 tttctctttctta 461  Q
    ||| |||||||||    
T  16211852 tttttctttctta 16211840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 18 - 461
Target Start/End: Complemental strand, 25505 - 25062
Alignment:
Q  18 tcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagt 117  Q
    ||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||  |||| |||||||    
T  25505 tcaggcttagttgttgctttagccttttctccgaatttcaatcttccttcatcgagagccttctgcacagaatccctgaaactagtgtaacgggataagt 25406  T
Q  118 tatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagc 217  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| || | ||||||||||||||||| ||| |||||||||||||     
T  25405 tatggcctaaaaaaccatgaaatttacaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaagattatgccatcaga 25306  T
Q  218 aactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgttt 317  Q
    |||||  ||||||||||||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||     
T  25305 aactagaagatcaaatatttcttcgcatttagacacttcaaaagtttaagtttttgggggatatttatcgtttttgggttcctctacgtttttcccgttc 25206  T
Q  318 gatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctg 417  Q
    |||||||| |||| |||||||||||||||  |||||||||| ||||  || ||||||| |||| ||||||| ||||||||  | ||||||||||||||||    
T  25205 gatggcctcaatactttacaagtgtaaggtggcccatctttcaattccgcaagatttatttcgttatcttctacagaatctgatccccaatcgaattctg 25106  T
Q  418 gttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    | |||||||| | ||| ||||||||||| |||||||||||||||    
T  25105 gctcactatctctagtatcgatataagcgactttctctttctta 25062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 30 - 461
Target Start/End: Complemental strand, 66254 - 65823
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa 129  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  66254 gttgttttagccttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaa 66155  T
Q  130 aaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatc 229  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||| |||| |||||| || ||||||| |||||||||||||||||||||||  |||||    
T  66154 aaccatgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactagaagatc 66055  T
Q  230 aaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaat 329  Q
    |||||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||| |  |||||||||||||| || |||||||||||||||    
T  66054 aaatatttcttcacatttggatacatcgaaagtataaattttcgggggatatttatcatttttagattcttctacgttttttccatttgatggccttaat 65955  T
Q  330 aatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccc 429  Q
    || |||||||| |||||  ||||||| || |||| ||| ||||||| |||| ||||||| ||||||||| | ||||||||||||||||| |||||||| |    
T  65954 aaattacaagtataaggtggcccatcattcaattctgcaagatttatttcgttatcttcaacagaatcggatccccaatcgaattctggctcactatctc 65855  T
Q  430 cagtttcgatataagcaactttctctttctta 461  Q
    |||| |||| |||||| ||||| |||||||||    
T  65854 cagtatcgacataagcgactttttctttctta 65823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 30 - 461
Target Start/End: Original strand, 139871 - 140302
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa 129  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||| || |||||||| |||||||    
T  139871 gttgttttagccttttctccgaatttcagtcttccttcgtcgagagccttctgcacagaatccctgaaacgagtgcaacgggaaaagttatgtcccaaaa 139970  T
Q  130 aaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatc 229  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||| |||| |||||| || ||||||| |||||||||||||||||| ||||  |||||    
T  139971 aaccatgaaatttacaaaaacctctcttcttcctctattccagaggaggaagtttcatgttgtctggcactaaaattatgccatcagcgactagaagatc 140070  T
Q  230 aaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaat 329  Q
    ||| ||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| |    
T  140071 aaaaatttcttcacatttagatacatcgaaagtgtacgttttcgggggatatttatcatttttggattcttctacgtttttcccatttgatggccttagt 140170  T
Q  330 aatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccc 429  Q
    |  |||||||| |||||| ||||||| ||||||| ||| ||||||| |||| ||||||| ||||||||  | ||||||||||||||||| |||||||| |    
T  140171 agcttacaagtataaggcggcccatcctttaattctgcaagatttatttcgttatcttcaacagaatctgatccccaatcgaattctggctcactatctc 140270  T
Q  430 cagtttcgatataagcaactttctctttctta 461  Q
    |||| ||||||||||||| ||| |||||||||    
T  140271 cagtatcgatataagcaattttttctttctta 140302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 30 - 457
Target Start/End: Original strand, 127628 - 128058
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaac----gagataagttatggccc 125  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||||| |||||||| ||||    | |||||||||||||||    
T  127628 gttgttttagccttttctccgaatttcaatcttccttcatcgagagccttctgcacataatcccttaaacgagtgcaacatacgggataagttatggccc 127727  T
Q  126 aaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaaca 225  Q
    ||||||||||||||||| ||||||||||| ||||||||||| || ||||| || | |||||| || ||||||| |||||||||||||||||||||||  |    
T  127728 aaaaaaccatgaaatttgcaaaaacctctcttcttcctctgttctagaggagggagtttcatgttttctggcactaaaattatgccatcagcaactagaa 127827  T
Q  226 gatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggcct 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  127828 gatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggata-ttatcatttttggactcttctacgtttttcccatttgatggcct 127926  T
Q  326 taataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcacta 425  Q
    |||| | ||||||||||||||| ||||||||||||||| ||| |||||||  ||  ||||||| ||| ||||  | ||||||||||||||||| ||||||    
T  127927 taatgacttacaagtgtaaggcggcccatcttttaattctgcaagatttatctcattatcttcaacaaaatctgatccccaatcgaattctggctcacta 128026  T
Q  426 tccccagtttcgatataagcaactttctcttt 457  Q
    || ||||| ||||||||||||||||| |||||    
T  128027 tctccagtatcgatataagcaactttttcttt 128058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 78 - 457
Target Start/End: Complemental strand, 16633 - 16254
Alignment:
Q  78 ttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggg 177  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |    
T  16633 ttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgatctagaggag 16534  T
Q  178 gaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttggggg 277  Q
    | | |||||||||||| | || ||||||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16533 ggagtttcatattatcagacactaaaattatgccatcagaaactagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttggggg 16434  T
Q  278 atatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttact 377  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||      
T  16433 atatttatcatgtttgggttcttctacgtttttcccatttgatggcctcaataatttacaagtgtaaggcggcccatcttttaattctgcaagatttata 16334  T
Q  378 tcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaactttctcttt 457  Q
    ||| |||| || ||||||||  |||||||| |||||||||| |||| ||| ||||| |||||||||||||||||||||||    
T  16333 tcgttatcatctacagaatctgaaccccaaacgaattctggctcacaatcaccagtatcgatataagcaactttctcttt 16254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 461
Target Start/End: Original strand, 38490 - 38933
Alignment:
Q  18 tcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagt 117  Q
    ||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  38490 tcaggcttagttgttgctttagccttttctccgaatttcaatcttccttcatcgagagtcttctgcacagaatccctgaaacgagtgcaacgggataagt 38589  T
Q  118 tatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagc 217  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||||||||| ||||| || | ||||||||||||||||| |||||||||||||||||     
T  38590 tatggcctaaaaaaccatgaaatttacaaaaaaaccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcaga 38689  T
Q  218 aactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgttt 317  Q
    |||||  ||||||||||||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||||| || |||||||||||||  ||     
T  38690 aactagaagatcaaatatttcttcgcatttagacacgtcaaaagtgtaagtttttgggggatatttatcgtttttgggttcctctacgtttttccaattc 38789  T
Q  318 gatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctg 417  Q
    |||||||| |||| |||||||||||||||  |||||||||| | ||  || ||||||| |||| | ||||| ||| ||||  | ||||||||||||||||    
T  38790 gatggcctcaatactttacaagtgtaaggtggcccatctttcagttccgcaagatttatttcgttgtcttctacataatctgatccccaatcgaattctg 38889  T
Q  418 gttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    | |||||||| ||||| ||||||||||| |||||||||||||||    
T  38890 gctcactatctccagtatcgatataagcgactttctctttctta 38933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 236; Significance: 1e-130; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 64 - 459
Target Start/End: Complemental strand, 64583 - 64188
Alignment:
Q  64 cttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcct 163  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  64583 cttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttacaaaaacctctcttcttcct 64484  T
Q  164 ctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagta 263  Q
    ||| |  ||||| |||| |||||| || ||||||| ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  64483 ctgttatagaggaggaagtttcatgttttctggcactaaaattatgccatcagaaactagaagatcaaatatttcttcacatttagatacatcaaaagta 64384  T
Q  264 taagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaatt 363  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||  |||||||||||||||| |||||||| |||| | |||||||||||||||    
T  64383 taagtttttgggggatatttatcatttttgaactcttctacgttttttccacttgatggccttaataacttacaagtataagccggcccatcttttaatt 64284  T
Q  364 ttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaactttctctttct 459  Q
     ||| |||||||  ||| ||||||   |||| ||  | ||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||    
T  64283 ctgcaagatttatctcgttatcttaagcagagtctgatccccaatcgaattctggctcactatctccagtatcgatataagcaactttttctttct 64188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 64 - 459
Target Start/End: Complemental strand, 73761 - 73366
Alignment:
Q  64 cttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcct 163  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  73761 cttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttacaaaaacctctcttcttcct 73662  T
Q  164 ctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagta 263  Q
    ||| |  ||||| |||| |||||| || ||||||| ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  73661 ctgttatagaggaggaagtttcatgttttctggcactaaaattatgccatcagaaactagaagatcaaatatttcttcacatttagatacatcaaaagta 73562  T
Q  264 taagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaatt 363  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||  |||||||||||||||| |||||||| |||| | |||||||||||||||    
T  73561 taagtttttgggggatatttatcatttttgaactcttctacgttttttccacttgatggccttaataacttacaagtataagccggcccatcttttaatt 73462  T
Q  364 ttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaactttctctttct 459  Q
     ||| |||||||  ||| ||||||   |||| ||  | ||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||    
T  73461 ctgcaagatttatctcgttatcttaagcagagtctgatccccaatcgaattctggctcactatctccagtatcgatataagcaactttttctttct 73366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 223; Significance: 1e-122; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 35 - 461
Target Start/End: Complemental strand, 4322 - 3896
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  4322 tttagacttttctccaaatttcagtcttccttcatcgagagccttttgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaaaacca 4223  T
Q  135 tgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaata 234  Q
    ||||||||||||||| |||| ||||||||||| |||||||| |||| |||||| || ||| ||| || |||||||||||||| |||||  |||||||| |    
T  4222 tgaaatttacaaaaatctctcttcttcctctgttccagaggaggaagtttcatgttgtctagcactagaattatgccatcagtaactagaagatcaaaaa 4123  T
Q  235 tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataattt 334  Q
    | ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| || |||||||  |||||||| || |||||||||| ||| ||    
T  4122 tctcttcacatttagatacatcaaaagtatatgttttcgggggatacttatcatttttaggttcttctaaatttttcccattcgatggccttagtaactt 4023  T
Q  335 acaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtt 434  Q
    |||||| |||||| | ||||||||||||| ||||||||||| |||| |||| || ||||||||  | | ||||||||||||||| |||||||| | |||     
T  4022 acaagtataaggcggtccatcttttaattctgcgagatttatttcgttatcatcaacagaatctgatcaccaatcgaattctggctcactatctctagta 3923  T
Q  435 tcgatataagcaactttctctttctta 461  Q
    ||||||||||||||||| |||||||||    
T  3922 tcgatataagcaactttttctttctta 3896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 461
Target Start/End: Original strand, 6435 - 6878
Alignment:
Q  18 tcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagt 117  Q
    ||||||||| | |||| ||||||||||||||| ||||||||  | |||||||||||||| |||| || ||||||||| |||||||| ||||| |||||||    
T  6435 tcaggcttggtagttgttttagccttttctccaaatttcagtttgccttcatcgagagccttctccaaagaatccctaaaacgagtgcaacgggataagt 6534  T
Q  118 tatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagc 217  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||| |||||| || ||||||| |||||| |||||||||||    
T  6535 tatgtcccaaaaaaccatgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatcttttctggcactaaaatcatgccatcagc 6634  T
Q  218 aactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgttt 317  Q
    |||||  ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||| |  |||||||||||||| || |||    
T  6635 aactagaagatcaaatatttcttcacatttggatacatcgaaagtataagttttcgggggatatttatcaattttagattcttctacgttttttccattt 6734  T
Q  318 gatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctg 417  Q
    ||| |||||||||| |||||||| |||||  |||||||||| |||| ||| ||||||| |||| ||||||| ||||||| | | ||||||| ||||||||    
T  6735 gatagccttaataacttacaagtataaggtggcccatctttcaattctgcaagatttatttcgttatcttcaacagaattggatccccaattgaattctg 6834  T
Q  418 gttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    | |||||||| ||| | |||| |||||| ||||| |||||||||    
T  6835 gctcactatctccaatgtcgacataagcgactttttctttctta 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 111 - 461
Target Start/End: Complemental strand, 4778 - 4428
Alignment:
Q  111 gataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgc 210  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| || | ||||||||| || |||| ||| ||| |||    
T  4778 gataagttatggcccaaaaaaccatgaaatttacaaaaaccccttttcttcctctgttctagaggagggagtttcatattttccggcactaacattttgc 4679  T
Q  211 catcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgttttt 310  Q
    |||| | |||||  ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  4678 catcggtaactagaagatcaaatatctcttcacacttagatacatcaaaagtataagtttttgggggatatttaacatttttggattcttctacgttttt 4579  T
Q  311 cccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcg 410  Q
     || |||||||||||||| |||||||| ||||||||| ||||||||||||||| ||| ||||||| |||| ||||||| ||||||||  | |||||||||    
T  4578 tccatttgatggccttaacaatttacaggtgtaaggcggcccatcttttaattctgcaagatttatttcgttatcttccacagaatctgatccccaatcg 4479  T
Q  411 aattctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  4478 aattctggctcactatctccagtatcgatataagcaactttctctttctta 4428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 30 - 310
Target Start/End: Complemental strand, 10759 - 10479
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa 129  Q
    |||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  10759 gttgttttagccttttctccgaattttagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaa 10660  T
Q  130 aaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatc 229  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||| |||| |||||| || ||||||| |||||||||||||||||||||||  |||||    
T  10659 aaccatgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactagaagatc 10560  T
Q  230 aaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgttttt 310  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  10559 aaatatttcttcacacttagatacatcaaaagtataagtttttgggggatatttatcatttttggactcttctacattttt 10479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 35 - 461
Target Start/End: Original strand, 159979 - 160406
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa-aacc 133  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| || ||||| ||||| ||||||||||| ||||||| ||||    
T  159979 tttagacttttctccaaatttcagtcttccttcatcgagagccttctgcacaaaatccctaaatcgagtgcaacgggataagttatgtcccaaaaaaacc 160078  T
Q  134 atgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaat 233  Q
    ||| ||||||||||||||||| ||||||||||| |||||||| |||| ||||||  | | ||||| || |||||||||||||| |||||  ||||||||     
T  160079 atggaatttacaaaaacctctcttcttcctctgttccagaggaggaagtttcatgctgtttggcactagaattatgccatcagtaactagaagatcaaaa 160178  T
Q  234 atttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatt 333  Q
    || |||||||||||||||||| ||||||| || ||||| |||||||||||||||||||| || |||| ||  |||||||| || |||||||||| ||| |    
T  160179 atctcttcacatttagatacagcaaaagtgtatgttttcgggggatatttatcatttttaggttcttttatatttttcccattcgatggccttagtaact 160278  T
Q  334 tacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagt 433  Q
    ||||||| |||||| ||||||||||||||| ||||||||||| |||| |||| || ||||||||  | ||||||| ||||||||| |||||||| |||||    
T  160279 tacaagtataaggcggcccatcttttaattctgcgagatttatttcgttatcatcaacagaatctgatccccaattgaattctggctcactatctccagt 160378  T
Q  434 ttcgatataagcaactttctctttctta 461  Q
     ||||||||||||||||| |||||||||    
T  160379 atcgatataagcaactttttctttctta 160406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 30 - 461
Target Start/End: Complemental strand, 4388 - 3957
Alignment:
Q  30 gttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaa 129  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||| | |||| ||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  4388 gttgttttagacttttctccaaatttcagccttccttcatcgagatccttctacacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaa 4289  T
Q  130 aaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatc 229  Q
    ||||||| ||||||||||||||||| ||||||||||| || ||||| |||| |||||| ||   ||||| || |||||||||||||| |||||  |||||    
T  4288 aaccatggaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttgcttggcactagaattatgccatcagtaactagaagatc 4189  T
Q  230 aaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaat 329  Q
    ||| || ||||| |||||||||||||||||||| || ||||| ||||||||| ||||||| || || |||||||  ||||| || |||||||||| || |    
T  4188 aaaaatctcttcgcatttagatacatcaaaagtgtatgttttcgggggatatgtatcattcttaggttcttctatattttttccatttgatggccgtagt 4089  T
Q  330 aatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccc 429  Q
    || |||||||| |||||| | ||||||||||||| ||||||||||| |||| |||| || ||| ||||  | ||||||||||||||||| |||||||| |    
T  4088 aacttacaagtataaggcggtccatcttttaattctgcgagatttatttcgttatcatcaacataatcagatccccaatcgaattctggctcactatctc 3989  T
Q  430 cagtttcgatataagcaactttctctttctta 461  Q
     ||| ||||||||||||||||| | |||||||    
T  3988 tagtatcgatataagcaactttttgtttctta 3957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 35 - 459
Target Start/End: Original strand, 43193 - 43617
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| |||||||| |||||||| |||||| ||||||||||| ||||||||||||| | |||||||||||||| | ||||||||||| || || ||||||    
T  43193 tttagtcttttctctgaatttcatccttccctcatcgagagccttctgcacagaattcttgaaacgagtacaatgggataagttatgtcctaagaaacca 43292  T
Q  135 tgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaata 234  Q
    || ||||||||||||||||| || |||||||| || ||||| |||| |||||| |||  ||||| || |||||||||||||| |||||  |||||||| |    
T  43293 tggaatttacaaaaacctctctttttcctctgctctagaggaggaagtttcatgttacttggcactagaattatgccatcagtaactagaagatcaaaaa 43392  T
Q  235 tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataattt 334  Q
    | ||||| |||||||||| ||||||||| || |||||||| |||||||||||||| || |  |||||    || || || ||||||||||||| ||| ||    
T  43393 tctcttcgcatttagataaatcaaaagtgtatgtttttggaggatatttatcattctttgcttcttcaggattctttccatttgatggccttagtaactt 43492  T
Q  335 acaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtt 434  Q
    |||||| || ||| ||||||||||| ||| ||| |||||||  ||| |||| ||||||| |||  | ||||||||||||||||| || || || |||||     
T  43493 acaagtatagggcggcccatcttttgattctgcaagatttatctcgttatcatcgacagtatcagatccccaatcgaattctgggtcgctgtctccagta 43592  T
Q  435 tcgatataagcaactttctctttct 459  Q
     ||||||||||||| || |||||||    
T  43593 acgatataagcaaccttttctttct 43617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 147; Significance: 2e-77; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 35 - 461
Target Start/End: Complemental strand, 148112 - 147686
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| |||||||||||| |||| |||||| | || |||||| ||||||||||| |||||||||||||||||||| |||||||||||  | || ||||||    
T  148112 tttagtcttttctccgaacttcaaccttcccttattgagagccttctgcacagagtccctgaaacgagtacaacgggataagttatgctctaagaaacca 148013  T
Q  135 tgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaata 234  Q
    || ||||| ||||||||||| || ||||| || |||| ||| || | ||||||||| | |||||  | |||||||||||||| |||||  |||||||| |    
T  148012 tggaattttcaaaaacctctctttttcctttgttccaaaggagggagtttcatattttttggcaccagaattatgccatcagtaactagaagatcaaaga 147913  T
Q  235 tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataattt 334  Q
    | ||||| |||||||| ||||| ||||| || ||||| || |||||||| ||||| || || ||||||  |||||| || ||||||||||||| ||| ||    
T  147912 tctcttcgcatttagaaacatcgaaagtgtatgttttaggaggatatttgtcattctttggttcttctgggttttttccatttgatggccttattaactt 147813  T
Q  335 acaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtt 434  Q
     || || || ||  ||||||||||||||| |||||||||||  ||| ||||||||| || |||| ||||| ||||||||||||| ||||| || |||||     
T  147812 tcaggtatatggtggcccatcttttaattctgcgagatttatctcgttatcttcgagagtatcggaaccctaatcgaattctgggtcactgtctccagta 147713  T
Q  435 tcgatataagcaactttctctttctta 461  Q
    || || |||||||||||||||||||||    
T  147712 tcaatgtaagcaactttctctttctta 147686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 35 - 461
Target Start/End: Complemental strand, 147073 - 146646
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| |||||||||||| |||| |||||| |||| |||||| ||||||||||| |||||||||||||||||||| |||| |||||| || || ||||||    
T  147073 tttagtcttttctccgaacttcaaccttccctcattgagagccttctgcacagagtccctgaaacgagtacaacgggatacgttatgccctaagaaacca 146974  T
Q  135 tgaaatttacaaaaacctct-tttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaat 233  Q
    |||||||||||||||||||| ||| ||||| || |||| ||| || |   ||||||| | |||||  | |||||||||||||| |||||  ||||||||     
T  146973 tgaaatttacaaaaacctctcttttttcctttgttccaaaggagggagaatcatattttttggcaccagaattatgccatcagtaactagaagatcaaag 146874  T
Q  234 atttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatt 333  Q
    || ||||| |||||||| ||||||||||| || ||||| || |||||||| ||||| || || |||||   ||| || || ||||||||||||| ||| |    
T  146873 atctcttcgcatttagaaacatcaaaagtgtatgttttaggaggatatttgtcattctttggttcttcagggttctttccatttgatggccttagtaact 146774  T
Q  334 tacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagt 433  Q
     ||| || || ||  ||||||||||||||| |||||||||||  ||| ||||||||| || |||| |||||||||| |||| ||| ||| | || |||||    
T  146773 aacaggtatatggtggcccatcttttaattctgcgagatttatctcgttatcttcgagagtatcggaaccccaatcaaattatgggtcattgtctccagt 146674  T
Q  434 ttcgatataagcaactttctctttctta 461  Q
     || || |||||||||||||||||||||    
T  146673 atcaatgtaagcaactttctctttctta 146646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 35 - 458
Target Start/End: Complemental strand, 83062 - 82638
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| |||||||||||| |||| |||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||| |||||| || || ||||||    
T  83062 tttagtcttttctccgaacttcaaccttccctcattgagagccttctgcacagagtccctgaaacgagtacaacgagatacgttatgccctaagaaacca 82963  T
Q  135 tgaaatttacaaaaacctct-tttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaat 233  Q
    || ||||||||||||||||| ||| ||||| || || | ||| || |   ||||||| | | |||  | |||||||||||||| |||||  |||| |||     
T  82962 tggaatttacaaaaacctctcttttttcctttgctctaaaggagggagaatcatatttttttgcaccagaattatgccatcagtaactagaagatgaaag 82863  T
Q  234 atttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatt 333  Q
    || ||||| |||||||| ||||| || || || ||||| || |||||||| ||||| || || |||||   ||| || || ||||||||||||| ||| |    
T  82862 atctcttcgcatttagaaacatctaaggtgtatgttttaggaggatatttgtcattctttggttcttcagggttctttccatttgatggccttagtaact 82763  T
Q  334 tacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagt 433  Q
    |||| || || ||  ||||||||||||||| |||||||||||  ||| |||||| || || ||||||||||||||| |||||||| ||| | || |||||    
T  82762 tacaggtatatggtggcccatcttttaattctgcgagatttatctcgttatctttgagagtatcgaaaccccaatcaaattctgggtcattgtctccagt 82663  T
Q  434 ttcgatataagcaactttctctttc 458  Q
     || || ||||||||||||||||||    
T  82662 atcaatgtaagcaactttctctttc 82638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 35 - 458
Target Start/End: Complemental strand, 120734 - 120310
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaacca 134  Q
    ||||| |||||||||||| |||| |||||| | || |||||| ||||||||||| ||||||||||||||||||||||||| |||||| || || ||||||    
T  120734 tttagtcttttctccgaacttcaaccttcccttattgagagccttctgcacagagtccctgaaacgagtacaacgagatacgttatgccctaagaaacca 120635  T
Q  135 tgaaatttacaaaaacctct-tttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaat 233  Q
    || ||||||||||||||||| ||| ||||| || || | ||| || |   ||||||| | | |||  | |||||||||||||| |||||  |||| |||     
T  120634 tggaatttacaaaaacctctcttttttcctttgctctaaaggagggagaatcatatttttttgcaccagaattatgccatcagtaactagaagatgaaag 120535  T
Q  234 atttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatt 333  Q
    || ||||| |||||||| ||||| || || || ||||| || |||||||| ||||| || || |||||   ||| || || ||||||||||||| ||| |    
T  120534 atctcttcgcatttagaaacatctaaggtgtatgttttaggaggatatttgtcattctttggttcttcagggttctttccatttgatggccttagtaact 120435  T
Q  334 tacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagt 433  Q
    |||| || || ||  ||||||||||||||| |||||||||||  ||| |||||| || || ||||||||||||||| |||||||| ||| | || |||||    
T  120434 tacaggtatatggtggcccatcttttaattctgcgagatttatctcgttatctttgagagtatcgaaaccccaatcaaattctgggtcattgtctccagt 120335  T
Q  434 ttcgatataagcaactttctctttc 458  Q
     || || ||||||||||||||||||    
T  120334 atcaatgtaagcaactttctctttc 120310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 41 - 461
Target Start/End: Original strand, 180225 - 180643
Alignment:
Q  41 cttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaat 140  Q
    |||||||||||| |||| |||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||    
T  180225 cttttctccgaacttcaaccttccctcatcgagagccctctgcacagaatccctgaaacgagtacaacgggataagttatgccctaagaaaccatgaaat 180324  T
Q  141 ttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttctt 240  Q
    |||||||||||||| ||  |||  || |||| ||| || | ||||||| | | |||||  | ||||||| |||||| |||||  |||||||| || ||||    
T  180325 ttacaaaaacctctctt--tccgttgttccaaaggagggagtttcataatttttggcaccagaattatgtcatcagtaactagaagatcaaagatctctt 180422  T
Q  241 cacatttagatacatcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagt 340  Q
    | |||||||| ||||| ||||| || ||||| || |||||||| ||||| || || ||||||  |||||| || ||||||||||||||||| || || ||    
T  180423 cgcatttagaaacatcgaaagtgtatgttttaggaggatatttgtcattctttggttcttctgggttttttccatttgatggccttaataacttgcaggt 180522  T
Q  341 gtaaggcagcccatcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgata 440  Q
     || ||  ||||||||||||||| |||||||||||  ||| |||||||||||| |||| ||||||||||||||| ||  ||||| || ||||| || |      
T  180523 atatggtggcccatcttttaattctgcgagatttatctcgttatcttcgacagtatcggaaccccaatcgaattatgcgtcactgtcaccagtatctacg 180622  T
Q  441 taagcaactttctctttctta 461  Q
    |||||||||||||| ||||||    
T  180623 taagcaactttctccttctta 180643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 126; Significance: 8e-65; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 36 - 257
Target Start/End: Complemental strand, 13719 - 13498
Alignment:
Q  36 ttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccat 135  Q
    |||| ||||||||| |||||||||||||| ||||||||||| ||||||||  ||||||| ||||||||||| || ||||||||||| |||||||||||||    
T  13719 ttagacttttctccaaatttcagccttccctcatcgagagccttctgcaccaaatccctaaaacgagtacatcgggataagttatgtcccaaaaaaccat 13620  T
Q  136 gaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatat 235  Q
    ||||||||||||||||||| || |||||||| || |||||||||| |||||| |||  ||||| ||||||||||||||| | |||||  |||||||| ||    
T  13619 gaaatttacaaaaacctctctttttcctctgctctagagggggaagtttcatgttacttggcactaaaattatgccatcggtaactagaagatcaaaaat 13520  T
Q  236 ttcttcacatttagatacatca 257  Q
    ||||||||||||||||||||||    
T  13519 ttcttcacatttagatacatca 13498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 461
Target Start/End: Complemental strand, 13501 - 13324
Alignment:
Q  284 atcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagatttacttcgcta 383  Q
    |||||||||||| |||||||| ||||| || ||||||||||||| ||| |||||||| |||||| |||||||||| ||||  |||||||||| || | ||    
T  13501 atcatttttgggttcttctacattttttccatttgatggccttagtaacttacaagtataaggcggcccatctttcaattcggcgagatttattttgtta 13402  T
Q  384 tcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    || || || |  ||| | |||||||| |||||||| |||||||| ||||  |||||||||||||| || |||||||||    
T  13401 tcatcaaccgcctcggatccccaatcaaattctggatcactatctccagcgtcgatataagcaaccttttctttctta 13324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 121; Significance: 8e-62; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 10954 - 10774
Alignment:
Q  18 tcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagt 117  Q
    ||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||  |||| |||||||    
T  10954 tcaggcttagttgttgctttagccttttctccgaatttcaatcttccttcatcgagagccttctgcacagaatccctgaaacaagtgtaacgggataagt 10855  T
Q  118 tatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatccagagggggaattttcatattatctggca 198  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| || | |||||||||||||||||    
T  10854 tatggcctaaaaaaccatgaaatttacaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggca 10774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 8937 - 8807
Alignment:
Q  18 tcaggcttgcttgttgctttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagt 117  Q
    ||||||||  ||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||    
T  8937 tcaggcttagttgttgctttagccttttctccgaatttcaatctttcttcatcgagagccttctgcatagaatccctgaaacgagtgcaacgggataagt 8838  T
Q  118 tatggcccaaaaaaccatgaaatttacaaaa 148  Q
    |||||||||||||||||||||||||||||||    
T  8837 tatggcccaaaaaaccatgaaatttacaaaa 8807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 8800 - 8741
Alignment:
Q  402 ccccaatcgaattctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||    
T  8800 ccccaatcgaattccggctcactatctccagtatcgatataagcaactttctctttctta 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 54 - 414
Target Start/End: Original strand, 68600 - 68960
Alignment:
Q  54 ttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctc 153  Q
    |||| |||||||||||||||||| ||||  | ||| ||||| |||||| ||||||||||||||||||| |  || ||||||||||||||||| || ||||    
T  68600 ttcaaccttccttcatcgagagccttctatatagattccctaaaacgattacaacgagataagttatgccttaagaaaccatgaaatttacagaatcctc 68699  T
Q  154 ttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatac 253  Q
    | || ||||  || || |  || || | ||||||||| | |||||  | ||||||||||||||  ||||| ||||| || || |||||||||||||| ||    
T  68700 tctttttccattgttcaaacggaggtagtttcatattttttggcaccagaattatgccatcagtgactaaaagatcgaagatctcttcacatttagaaac 68799  T
Q  254 atcaaaagtataagtttttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagccca 353  Q
    ||| |||||||| ||||| || | |||||| |||||||| || |||||   |||||| || |||||||||||||||||||| ||  | |||||  |||||    
T  68800 atcgaaagtatatgttttaggagaatatttgtcatttttaggttcttcagggttttttccatttgatggccttaataatttgcagttataaggtggccca 68899  T
Q  354 tcttttaattttgcgagatttacttcgctatcttcgacagaatcgaaaccccaatcgaatt 414  Q
    |||||||| | ||||||||||| |||  |||||||||||| |||  | |||||||||||||    
T  68900 tcttttaactctgcgagatttatttcattatcttcgacagtatctgacccccaatcgaatt 68960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 275 - 461
Target Start/End: Complemental strand, 32791 - 32605
Alignment:
Q  275 gggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgagattt 374  Q
    ||||||||||||||| || || |||||||  ||||| || ||||||||||||| ||| |||||||| |||||| ||||||||||||||| | ||||||||    
T  32791 gggatatttatcattcttaggttcttctatattttttccatttgatggccttagtaacttacaagtataaggcggcccatcttttaattctacgagattt 32692  T
Q  375 acttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcactatccccagtttcgatataagcaactttctctttctta 461  Q
    | |||| |||| || ||||||||  | ||| ||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||    
T  32691 atttcgttatcatcaacagaatcagatccctaatcgaattctggctcactatctccagtatcgatataagcaactttttctttctta 32605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 32865 - 32786
Alignment:
Q  35 tttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagata 114  Q
    ||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  32865 tttagacttttctccaaatttcagccttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggata 32786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1611 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold1611
Description:

Target: scaffold1611; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 54 - 283
Target Start/End: Original strand, 706 - 935
Alignment:
Q  54 ttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctc 153  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||    
T  706 ttcagccttccctcatcaagagctttctgcacataatccctgaaaggagtacaacgagataagttatggcctaaaaacccatggaatttacaaaatcctc 805  T
Q  154 ttttcttcctctgatccagagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatac 253  Q
    | || ||||| || || | ||| ||   |||||| || | |||| ||||| ||| ||||||||  ||||| ||||| || || |||||||||||||| ||    
T  806 tctttttcctttgctctaaaggaggcggtttcatgttgtttggccgtaaagttacgccatcagtgactaaaagatcgaagatctcttcacatttagaaac 905  T
Q  254 atcaaaagtataagtttttgggggatattt 283  Q
    ||| | || ||| ||||| || ||||||||    
T  906 atcgagagaatatgttttaggaggatattt 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 71 - 424
Target Start/End: Original strand, 134533 - 134886
Alignment:
Q  71 gagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttcttcctctgatcc 170  Q
    |||||| |||| || ||| ||| |||| |||||||||||||||||||||||    ||||| |||||  |||||||||| ||||| || ||||| || ||     
T  134533 gagagccttctacatagattccgtgaaccgagtacaacgagataagttatgttttaaaaacccatggtatttacaaaatcctctctttttcctttgttct 134632  T
Q  171 agagggggaattttcatattatctggcagtaaaattatgccatcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagttt 270  Q
    | ||| || | |||||| || | |||||  ||||||||| | | ||  ||||  ||||| || || |||||||||||||| ||||| |||||||| ||||    
T  134633 aaaggaggcaatttcatgttctttggcacaaaaattatgtcgttagtgactaggagatcgaagatctcttcacatttagaaacatcgaaagtatatgttt 134732  T
Q  271 ttgggggatatttatcatttttgggctcttctacgtttttcccgtttgatggccttaataatttacaagtgtaaggcagcccatcttttaattttgcgag 370  Q
    | || |||||||| ||||||||  | |||||    || || ||||| |||||||||| |||||| || |  |||||  ||||||||||||||| ||| ||    
T  134733 taggaggatatttgtcatttttaagttcttcaggattctttccgttcgatggccttagtaatttgcaggcataaggtggcccatcttttaattctgcaag 134832  T
Q  371 atttacttcgctatcttcgacagaatcgaaaccccaatcgaattctggttcact 424  Q
    ||||| |||  ||||||| |||| |||  | ||||||||||||||||| |||||    
T  134833 atttatttcattatcttcaacagtatctgatccccaatcgaattctgggtcact 134886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 11790 - 11864
Alignment:
Q  56 cagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaa 130  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11790 cagccttccctcatcgagagccttctgcacagaatccctgaaacgagtacaacgagataagttatggcctaaaaa 11864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 6580 - 6665
Alignment:
Q  36 ttagccttttctccgaatttcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatg 121  Q
    ||||||||||||||||| |||| |||||| ||||||||||| ||||||||||| |||||||||||||||||| | | |||||||||    
T  6580 ttagccttttctccgaacttcaaccttccctcatcgagagccttctgcacagagtccctgaaacgagtacaatggggtaagttatg 6665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 461 - 402
Alignment:
Q  401 accccaatcgaattctggttcactatccccagtttcgatataagcaactttctctttctt 460  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  461 accccaatcgaattctggttcactatccccagtatcgatataagcaactttttctttctt 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1388 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1388
Description:

Target: scaffold1388; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 493 - 555
Alignment:
Q  55 tcagccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagt 117  Q
    |||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  493 tcagccttccctcatcaagagccttctgcacataatccctgaaacgagtacaacgagataagt 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 15507 - 15602
Alignment:
Q  57 agccttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgagataagttatggcccaaaaaaccatgaaatttacaaaaacct 152  Q
    |||||||| ||||| || ||||| ||||| ||||||||||||  |  |||||||||    |||||||| ||| |||||||||||||||||||||||    
T  15507 agccttccatcatcaagcgctttttgcactgaatccctgaaagaaacacaacgagaagtattatggcctaaagaaccatgaaatttacaaaaacct 15602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 1759 - 1671
Alignment:
Q  204 attatgccatcagcaactaacagatcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcattttt 292  Q
    |||||||| ||||||||||| ||||| || ||||| |||||||| |  |||||||| ||||| ||||| |  | |||||||||||||||    
T  1759 attatgccttcagcaactaaaagatcgaagatttcatcacatttggtaacatcaaatgtatatgttttagatgcatatttatcattttt 1671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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