View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6965_low_24 (Length: 254)

Name: NF6965_low_24
Description: NF6965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6965_low_24
NF6965_low_24
[»] chr8 (50 HSPs)
chr8 (98-180)||(5813569-5813651)
chr8 (84-178)||(15816115-15816209)
chr8 (84-174)||(22651959-22652049)
chr8 (84-174)||(29510290-29510380)
chr8 (84-174)||(2572042-2572132)
chr8 (87-172)||(13436953-13437038)
chr8 (98-174)||(20873052-20873128)
chr8 (98-170)||(22595981-22596053)
chr8 (101-177)||(25192350-25192426)
chr8 (106-177)||(41838131-41838202)
chr8 (98-180)||(36450754-36450836)
chr8 (88-157)||(25566841-25566910)
chr8 (99-171)||(22197743-22197815)
chr8 (97-171)||(8342960-8343032)
chr8 (98-169)||(24613509-24613579)
chr8 (94-173)||(30271287-30271366)
chr8 (97-171)||(8343302-8343376)
chr8 (99-164)||(4298887-4298952)
chr8 (135-180)||(22204616-22204661)
chr8 (84-165)||(29447096-29447177)
chr8 (104-171)||(18407705-18407772)
chr8 (84-158)||(28745497-28745571)
chr8 (98-187)||(30077387-30077477)
chr8 (99-169)||(31556985-31557054)
chr8 (84-171)||(4673411-4673498)
chr8 (92-174)||(24857992-24858076)
chr8 (119-177)||(27101495-27101553)
chr8 (104-170)||(41831946-41832012)
chr8 (98-171)||(4786338-4786411)
chr8 (98-171)||(13844596-13844669)
chr8 (84-157)||(21465412-21465485)
chr8 (98-150)||(4948659-4948711)
chr8 (98-174)||(18170482-18170558)
chr8 (98-174)||(18634050-18634126)
chr8 (129-177)||(24196628-24196676)
chr8 (88-156)||(35519797-35519865)
chr8 (88-171)||(24362192-24362275)
chr8 (116-171)||(39954297-39954352)
chr8 (84-174)||(7442828-7442918)
chr8 (88-162)||(11927076-11927150)
chr8 (84-174)||(25172684-25172774)
chr8 (99-176)||(20679396-20679473)
chr8 (98-171)||(24669419-24669492)
chr8 (98-174)||(926788-926864)
chr8 (127-187)||(6065686-6065746)
chr8 (85-177)||(14692440-14692531)
chr8 (144-180)||(15023291-15023327)
chr8 (84-120)||(27067286-27067322)
chr8 (141-189)||(30892492-30892540)
chr8 (98-174)||(34897068-34897144)
[»] chr5 (51 HSPs)
chr5 (84-189)||(39698509-39698614)
chr5 (84-174)||(36642748-36642838)
chr5 (84-174)||(21522733-21522823)
chr5 (84-174)||(21533299-21533389)
chr5 (84-174)||(19579684-19579774)
chr5 (103-174)||(14674252-14674323)
chr5 (98-168)||(33178014-33178084)
chr5 (98-174)||(21191056-21191132)
chr5 (88-172)||(21351895-21351979)
chr5 (98-177)||(6247602-6247681)
chr5 (92-187)||(10298539-10298634)
chr5 (84-171)||(21542016-21542103)
chr5 (92-171)||(31084309-31084388)
chr5 (99-189)||(42893328-42893418)
chr5 (94-174)||(13287395-13287475)
chr5 (88-174)||(19552535-19552619)
chr5 (84-174)||(37328830-37328920)
chr5 (88-190)||(7677676-7677774)
chr5 (84-171)||(11685925-11686011)
chr5 (89-168)||(41633724-41633803)
chr5 (86-191)||(17088250-17088356)
chr5 (84-172)||(3966488-3966576)
chr5 (88-176)||(12641655-12641743)
chr5 (98-170)||(21576745-21576817)
chr5 (98-173)||(8420011-8420086)
chr5 (98-174)||(15382460-15382538)
chr5 (116-174)||(22013397-22013455)
chr5 (98-162)||(15883982-15884047)
chr5 (102-170)||(24906305-24906373)
chr5 (84-171)||(41995457-41995542)
chr5 (92-180)||(43001777-43001865)
chr5 (102-165)||(7218271-7218334)
chr5 (98-180)||(43564860-43564940)
chr5 (92-157)||(5894827-5894892)
chr5 (100-173)||(17177025-17177098)
chr5 (84-165)||(21814253-21814334)
chr5 (84-165)||(30135305-30135389)
chr5 (98-174)||(16203795-16203871)
chr5 (94-190)||(39205847-39205943)
chr5 (98-172)||(14422889-14422961)
chr5 (139-174)||(15410489-15410524)
chr5 (94-189)||(16374338-16374433)
chr5 (116-171)||(27144449-27144504)
chr5 (106-174)||(4105240-4105310)
chr5 (84-170)||(18592060-18592146)
chr5 (94-171)||(2436908-2436985)
chr5 (105-174)||(6326304-6326373)
chr5 (117-174)||(6770526-6770583)
chr5 (95-176)||(30183530-30183611)
chr5 (102-158)||(12159951-12160007)
chr5 (98-166)||(28588674-28588742)
[»] chr6 (61 HSPs)
chr6 (84-172)||(16766682-16766770)
chr6 (84-174)||(9107356-9107446)
chr6 (98-180)||(17841589-17841671)
chr6 (84-174)||(8365505-8365595)
chr6 (92-174)||(12696307-12696389)
chr6 (94-172)||(10770670-10770748)
chr6 (99-172)||(7938101-7938174)
chr6 (98-174)||(426514-426590)
chr6 (85-177)||(9522871-9522963)
chr6 (98-174)||(28152082-28152157)
chr6 (98-174)||(34595117-34595193)
chr6 (84-171)||(5970094-5970181)
chr6 (100-171)||(16833294-16833365)
chr6 (98-171)||(3209367-3209441)
chr6 (98-168)||(7977830-7977900)
chr6 (94-174)||(7930288-7930368)
chr6 (98-174)||(8776973-8777049)
chr6 (84-172)||(21395294-21395381)
chr6 (95-174)||(3398602-3398680)
chr6 (98-172)||(5732510-5732584)
chr6 (84-165)||(8713971-8714053)
chr6 (84-170)||(33340371-33340457)
chr6 (84-170)||(35125641-35125727)
chr6 (98-167)||(853859-853928)
chr6 (98-166)||(4877933-4878002)
chr6 (98-191)||(7265593-7265686)
chr6 (99-189)||(27904037-27904129)
chr6 (98-170)||(7801156-7801228)
chr6 (98-165)||(32978899-32978967)
chr6 (94-156)||(9911524-9911587)
chr6 (127-190)||(19147432-19147495)
chr6 (103-170)||(31959146-31959213)
chr6 (116-174)||(9658862-9658920)
chr6 (94-174)||(9027161-9027241)
chr6 (98-174)||(23771562-23771637)
chr6 (98-149)||(403864-403915)
chr6 (98-177)||(6898281-6898360)
chr6 (116-171)||(10842518-10842573)
chr6 (94-180)||(17302533-17302620)
chr6 (87-170)||(26562676-26562759)
chr6 (104-170)||(1681745-1681811)
chr6 (84-174)||(17435182-17435272)
chr6 (89-171)||(18252742-18252824)
chr6 (104-161)||(1191706-1191763)
chr6 (98-147)||(1700362-1700411)
chr6 (84-165)||(16488576-16488657)
chr6 (99-171)||(24645466-24645539)
chr6 (98-166)||(33001289-33001357)
chr6 (99-174)||(15489733-15489808)
chr6 (98-157)||(28715295-28715354)
chr6 (84-174)||(10294090-10294180)
chr6 (129-171)||(12868706-12868748)
chr6 (98-168)||(19040341-19040411)
chr6 (99-180)||(31429004-31429085)
chr6 (88-174)||(34073337-34073423)
chr6 (98-171)||(5626696-5626769)
chr6 (94-171)||(7086781-7086858)
chr6 (105-174)||(17341671-17341740)
chr6 (88-165)||(18367828-18367905)
chr6 (88-164)||(8931592-8931668)
chr6 (127-179)||(20371139-20371191)
[»] chr3 (59 HSPs)
chr3 (98-174)||(10335286-10335362)
chr3 (98-180)||(10318035-10318116)
chr3 (98-171)||(33359747-33359820)
chr3 (94-189)||(27505214-27505309)
chr3 (84-170)||(4987277-4987363)
chr3 (84-165)||(14209105-14209186)
chr3 (98-174)||(55401058-55401134)
chr3 (84-171)||(14829676-14829762)
chr3 (94-171)||(14747547-14747625)
chr3 (84-174)||(15796280-15796370)
chr3 (96-174)||(28917984-28918062)
chr3 (84-191)||(34910277-34910390)
chr3 (88-157)||(1509539-1509608)
chr3 (99-172)||(10268487-10268560)
chr3 (98-171)||(16000016-16000089)
chr3 (98-174)||(8587021-8587097)
chr3 (84-171)||(34185109-34185196)
chr3 (98-179)||(51206353-51206432)
chr3 (98-179)||(10954930-10955011)
chr3 (98-171)||(21479104-21479177)
chr3 (92-189)||(25948881-25948978)
chr3 (94-171)||(39756222-39756299)
chr3 (101-177)||(26508090-26508166)
chr3 (84-171)||(41961636-41961723)
chr3 (84-174)||(14216875-14216965)
chr3 (84-174)||(14223004-14223094)
chr3 (84-174)||(14832082-14832172)
chr3 (88-174)||(28812499-28812584)
chr3 (86-160)||(55212960-55213033)
chr3 (92-165)||(49651780-49651853)
chr3 (98-174)||(26492205-26492281)
chr3 (100-171)||(20503451-20503522)
chr3 (93-174)||(3164020-3164101)
chr3 (91-180)||(22774063-22774152)
chr3 (84-171)||(3610619-3610707)
chr3 (98-174)||(8383240-8383316)
chr3 (104-172)||(35994744-35994811)
chr3 (127-171)||(40052318-40052362)
chr3 (84-174)||(750604-750695)
chr3 (135-174)||(3865593-3865632)
chr3 (105-168)||(11610510-11610573)
chr3 (98-189)||(18426917-18427008)
chr3 (118-189)||(23870579-23870650)
chr3 (98-172)||(25775493-25775568)
chr3 (88-171)||(28678289-28678372)
chr3 (84-166)||(8039821-8039903)
chr3 (84-174)||(16788995-16789085)
chr3 (96-170)||(21256984-21257058)
chr3 (104-188)||(5339077-5339161)
chr3 (116-172)||(14979166-14979222)
chr3 (84-171)||(25064895-25064980)
chr3 (95-174)||(4990964-4991043)
chr3 (91-170)||(9800027-9800106)
chr3 (103-174)||(35312037-35312108)
chr3 (98-159)||(7928448-7928509)
chr3 (136-173)||(32400743-32400780)
chr3 (103-171)||(1514603-1514671)
chr3 (104-164)||(34307786-34307846)
chr3 (98-174)||(49505154-49505230)
[»] chr7 (51 HSPs)
chr7 (84-172)||(24339627-24339715)
chr7 (92-174)||(13770674-13770756)
chr7 (94-174)||(43027465-43027545)
chr7 (88-171)||(9408324-9408407)
chr7 (99-174)||(11061077-11061152)
chr7 (98-172)||(15680794-15680868)
chr7 (92-172)||(5409830-5409910)
chr7 (84-169)||(11272572-11272659)
chr7 (88-170)||(7438693-7438775)
chr7 (98-172)||(25481887-25481961)
chr7 (94-174)||(18215182-18215262)
chr7 (88-171)||(21560484-21560572)
chr7 (94-174)||(27945024-27945104)
chr7 (84-167)||(2334238-2334322)
chr7 (98-191)||(19213771-19213862)
chr7 (98-171)||(7197297-7197370)
chr7 (88-153)||(26033451-26033516)
chr7 (98-174)||(24105661-24105737)
chr7 (84-172)||(32308105-32308193)
chr7 (84-171)||(6630898-6630985)
chr7 (92-157)||(9778500-9778565)
chr7 (87-187)||(11665429-11665536)
chr7 (89-149)||(18039006-18039067)
chr7 (111-176)||(23191877-23191942)
chr7 (97-157)||(19992001-19992061)
chr7 (84-172)||(21930614-21930701)
chr7 (95-174)||(10042920-10042999)
chr7 (98-174)||(21864789-21864867)
chr7 (98-189)||(28155538-28155629)
chr7 (92-170)||(32094014-32094093)
chr7 (99-170)||(33994199-33994270)
chr7 (92-174)||(1433437-1433519)
chr7 (97-159)||(3991322-3991384)
chr7 (84-158)||(11831431-11831505)
chr7 (116-170)||(41020483-41020537)
chr7 (84-165)||(25822647-25822728)
chr7 (98-186)||(9482905-9482993)
chr7 (128-188)||(20545266-20545326)
chr7 (98-174)||(26733287-26733363)
chr7 (87-157)||(8160416-8160486)
chr7 (94-171)||(5235972-5236049)
chr7 (141-174)||(12010023-12010056)
chr7 (107-171)||(13557750-13557817)
chr7 (97-170)||(35861951-35862024)
chr7 (101-189)||(2948651-2948739)
chr7 (92-188)||(5548646-5548741)
chr7 (94-174)||(18013070-18013150)
chr7 (98-170)||(20549778-20549850)
chr7 (127-171)||(21826259-21826303)
chr7 (93-169)||(22602705-22602781)
chr7 (102-170)||(40287361-40287428)
[»] chr1 (64 HSPs)
chr1 (84-171)||(47989484-47989570)
chr1 (98-180)||(46348383-46348465)
chr1 (102-174)||(48040465-48040538)
chr1 (94-189)||(1704988-1705083)
chr1 (99-189)||(1815225-1815315)
chr1 (98-171)||(22881616-22881689)
chr1 (88-180)||(18556446-18556538)
chr1 (98-174)||(22515887-22515963)
chr1 (93-167)||(113289-113363)
chr1 (92-174)||(1486703-1486785)
chr1 (84-174)||(5376486-5376576)
chr1 (84-174)||(6612157-6612247)
chr1 (98-191)||(31672895-31672989)
chr1 (98-173)||(9103624-9103698)
chr1 (84-174)||(40917734-40917822)
chr1 (103-174)||(48450592-48450663)
chr1 (84-171)||(5944267-5944356)
chr1 (84-171)||(31694696-31694785)
chr1 (94-171)||(24577182-24577259)
chr1 (98-179)||(38078661-38078742)
chr1 (87-190)||(17778513-17778616)
chr1 (98-166)||(19058856-19058924)
chr1 (98-174)||(42359449-42359525)
chr1 (98-189)||(39953146-39953237)
chr1 (105-171)||(14359529-14359594)
chr1 (98-173)||(37598816-37598890)
chr1 (116-174)||(398783-398841)
chr1 (106-170)||(13011223-13011288)
chr1 (98-171)||(35702588-35702661)
chr1 (98-171)||(41877470-41877543)
chr1 (98-174)||(5927340-5927416)
chr1 (84-172)||(28273074-28273162)
chr1 (99-171)||(36878447-36878519)
chr1 (98-165)||(51410016-51410084)
chr1 (100-171)||(13997869-13997940)
chr1 (103-174)||(31015026-31015097)
chr1 (91-174)||(38503303-38503386)
chr1 (87-157)||(6332671-6332740)
chr1 (84-138)||(15449218-15449272)
chr1 (100-174)||(21378561-21378635)
chr1 (100-173)||(32434718-32434792)
chr1 (117-174)||(2896140-2896197)
chr1 (84-177)||(21032187-21032279)
chr1 (94-174)||(6427333-6427413)
chr1 (84-172)||(9629886-9629974)
chr1 (99-159)||(40258934-40258994)
chr1 (84-167)||(17754301-17754384)
chr1 (102-174)||(18471281-18471355)
chr1 (104-171)||(30359374-30359441)
chr1 (84-147)||(44482240-44482303)
chr1 (94-132)||(2218264-2218302)
chr1 (88-170)||(10572579-10572661)
chr1 (116-174)||(12443478-12443536)
chr1 (128-174)||(15641060-15641106)
chr1 (98-148)||(18337338-18337388)
chr1 (95-157)||(25272482-25272544)
chr1 (84-162)||(25361881-25361959)
chr1 (88-165)||(9828036-9828113)
chr1 (95-172)||(15323148-15323225)
chr1 (135-180)||(29144395-29144440)
chr1 (116-177)||(34257928-34257989)
chr1 (98-173)||(24334705-24334781)
chr1 (85-157)||(34371714-34371785)
chr1 (98-174)||(52903232-52903308)
[»] scaffold0003 (2 HSPs)
scaffold0003 (84-174)||(241577-241667)
scaffold0003 (135-180)||(348077-348122)
[»] scaffold0223 (1 HSPs)
scaffold0223 (90-174)||(20155-20239)
[»] chr2 (52 HSPs)
chr2 (96-174)||(20539672-20539750)
chr2 (102-174)||(6940238-6940310)
chr2 (92-174)||(14996217-14996300)
chr2 (190-245)||(27520028-27520083)
chr2 (92-174)||(24894372-24894454)
chr2 (84-174)||(30717516-30717606)
chr2 (98-180)||(37558954-37559036)
chr2 (84-173)||(37419727-37419816)
chr2 (98-174)||(18421946-18422022)
chr2 (98-174)||(19536397-19536474)
chr2 (98-171)||(38117159-38117232)
chr2 (84-172)||(11223849-11223937)
chr2 (98-174)||(30404850-30404926)
chr2 (84-174)||(15657847-15657937)
chr2 (105-179)||(21374706-21374780)
chr2 (98-171)||(21624252-21624326)
chr2 (89-174)||(23058433-23058519)
chr2 (84-174)||(34784968-34785058)
chr2 (98-174)||(2438719-2438793)
chr2 (91-168)||(12668416-12668493)
chr2 (99-172)||(18841014-18841087)
chr2 (98-171)||(20473308-20473381)
chr2 (93-166)||(33153415-33153488)
chr2 (98-174)||(15972856-15972932)
chr2 (98-174)||(30335400-30335476)
chr2 (99-174)||(21091706-21091781)
chr2 (84-171)||(26769497-26769584)
chr2 (84-174)||(34337167-34337252)
chr2 (101-174)||(23718009-23718082)
chr2 (101-174)||(24105681-24105754)
chr2 (95-171)||(36756341-36756417)
chr2 (98-157)||(18255980-18256039)
chr2 (116-174)||(16069272-16069330)
chr2 (98-172)||(31018575-31018649)
chr2 (135-172)||(27460011-27460048)
chr2 (88-168)||(4882686-4882766)
chr2 (141-189)||(27084230-27084278)
chr2 (99-179)||(42832277-42832357)
chr2 (95-158)||(974746-974809)
chr2 (116-171)||(31808063-31808118)
chr2 (116-171)||(37986765-37986820)
chr2 (105-180)||(39323241-39323316)
chr2 (104-174)||(12940941-12941011)
chr2 (98-172)||(20242727-20242801)
chr2 (116-174)||(21616745-21616803)
chr2 (116-170)||(21782836-21782890)
chr2 (146-196)||(24009258-24009307)
chr2 (135-189)||(34221534-34221588)
chr2 (141-191)||(34994019-34994069)
chr2 (98-160)||(5040729-5040793)
chr2 (84-177)||(27286278-27286371)
chr2 (84-168)||(18420420-18420504)
[»] chr4 (50 HSPs)
chr4 (96-180)||(30298923-30299008)
chr4 (96-180)||(30327791-30327876)
chr4 (88-187)||(4383338-4383436)
chr4 (88-189)||(22234880-22234982)
chr4 (98-174)||(23292986-23293062)
chr4 (106-177)||(11651142-11651213)
chr4 (95-177)||(16303263-16303345)
chr4 (98-171)||(21945489-21945562)
chr4 (95-172)||(27706174-27706251)
chr4 (92-180)||(12895110-12895197)
chr4 (91-171)||(19482654-19482734)
chr4 (98-173)||(49431009-49431085)
chr4 (92-171)||(3947760-3947839)
chr4 (99-174)||(35157986-35158061)
chr4 (90-167)||(28084511-28084589)
chr4 (84-171)||(50280867-50280955)
chr4 (98-171)||(2361975-2362048)
chr4 (94-171)||(11596348-11596425)
chr4 (98-174)||(12797338-12797413)
chr4 (100-191)||(29205406-29205501)
chr4 (98-176)||(34306804-34306881)
chr4 (87-157)||(51701258-51701328)
chr4 (88-165)||(24613691-24613768)
chr4 (98-170)||(42640513-42640588)
chr4 (98-166)||(12895274-12895342)
chr4 (88-174)||(30982868-30982951)
chr4 (100-179)||(6485613-6485692)
chr4 (98-189)||(28964248-28964338)
chr4 (99-164)||(715608-715674)
chr4 (99-164)||(752934-753000)
chr4 (93-163)||(13134444-13134514)
chr4 (84-174)||(30838193-30838283)
chr4 (97-170)||(31800477-31800550)
chr4 (106-171)||(40481623-40481687)
chr4 (84-171)||(12708132-12708220)
chr4 (84-171)||(14126096-14126184)
chr4 (84-157)||(19500844-19500919)
chr4 (135-171)||(24543967-24544003)
chr4 (98-162)||(54580023-54580087)
chr4 (84-171)||(847937-848024)
chr4 (98-157)||(4157150-4157208)
chr4 (91-174)||(11931263-11931346)
chr4 (104-177)||(20633465-20633535)
chr4 (98-165)||(38847012-38847079)
chr4 (84-191)||(46083977-46084083)
chr4 (84-174)||(5414158-5414248)
chr4 (98-172)||(16073380-16073453)
chr4 (98-171)||(15029751-15029824)
chr4 (85-159)||(19312329-19312407)
chr4 (87-171)||(35723373-35723458)
[»] scaffold0053 (1 HSPs)
scaffold0053 (98-174)||(8781-8857)
[»] scaffold0004 (2 HSPs)
scaffold0004 (105-192)||(92772-92859)
scaffold0004 (99-170)||(123612-123686)
[»] scaffold0103 (1 HSPs)
scaffold0103 (106-180)||(51788-51862)
[»] scaffold0019 (1 HSPs)
scaffold0019 (84-171)||(71709-71798)
[»] scaffold0171 (2 HSPs)
scaffold0171 (92-171)||(23406-23485)
scaffold0171 (84-170)||(23497-23584)
[»] scaffold0136 (1 HSPs)
scaffold0136 (84-171)||(3835-3922)
[»] scaffold0652 (1 HSPs)
scaffold0652 (98-174)||(462-538)
[»] scaffold0027 (1 HSPs)
scaffold0027 (98-174)||(46665-46741)
[»] scaffold0450 (1 HSPs)
scaffold0450 (84-191)||(8621-8728)
[»] scaffold0722 (1 HSPs)
scaffold0722 (98-176)||(7032-7110)
[»] scaffold0361 (1 HSPs)
scaffold0361 (107-188)||(14498-14580)
[»] scaffold0086 (1 HSPs)
scaffold0086 (91-180)||(2900-2994)
[»] scaffold0018 (2 HSPs)
scaffold0018 (93-174)||(178813-178895)
scaffold0018 (105-177)||(192256-192328)
[»] scaffold0011 (1 HSPs)
scaffold0011 (99-173)||(17750-17824)
[»] scaffold0306 (1 HSPs)
scaffold0306 (98-174)||(13383-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (98-174)||(21868-21944)
[»] scaffold0044 (1 HSPs)
scaffold0044 (84-167)||(53170-53253)
[»] scaffold0025 (1 HSPs)
scaffold0025 (95-173)||(23753-23832)
[»] scaffold0227 (1 HSPs)
scaffold0227 (106-191)||(7319-7405)
[»] scaffold0021 (1 HSPs)
scaffold0021 (101-174)||(130465-130538)
[»] scaffold0057 (1 HSPs)
scaffold0057 (84-164)||(24018-24097)
[»] scaffold0793 (1 HSPs)
scaffold0793 (99-164)||(4884-4950)
[»] scaffold0122 (1 HSPs)
scaffold0122 (94-172)||(8651-8729)
[»] scaffold0008 (1 HSPs)
scaffold0008 (88-174)||(263362-263448)
[»] scaffold0246 (1 HSPs)
scaffold0246 (106-171)||(19562-19626)
[»] scaffold1528 (1 HSPs)
scaffold1528 (84-167)||(1025-1108)
[»] scaffold0066 (1 HSPs)
scaffold0066 (110-165)||(33375-33430)
[»] scaffold0126 (1 HSPs)
scaffold0126 (84-174)||(19128-19217)
[»] scaffold0050 (1 HSPs)
scaffold0050 (98-171)||(70264-70337)
[»] scaffold0007 (1 HSPs)
scaffold0007 (141-174)||(225311-225344)


Alignment Details
Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 5813651 - 5813569
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgtatccgt 5813569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 15816115 - 15816209
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatcc 178  Q
    |||||||||| ||||||||||||||||| || |||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  15816115 gtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtatcc 15816209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 22652049 - 22651959
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||||||||||||||| ||| | | || ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  22652049 gtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 22651959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 29510290 - 29510380
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||| ||||||||||||||| ||| ||| || | ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  29510290 gtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 29510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 2572042 - 2572132
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||| ||||||| |||||| || |||||    
T  2572042 gtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgt 2572132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 13436953 - 13437038
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||||||||||||||||||||  ||||  | || ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  13436953 cgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 13437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 20873128 - 20873052
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| ||||||||| || |||||||||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgt 20873052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 22596053 - 22595981
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||| ||||||||| ||||||| || ||||| | ||||||||||||||||||||||||||||||||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 25192350 - 25192426
Alignment:
Q  101 caccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||||||||| || ||| ||| || ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatc 25192426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 41838131 - 41838202
Alignment:
Q  106 acacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||||||| || |||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatc 41838202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 36450754 - 36450836
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||| ||||||||| ||||||| || | ||||| ||||| |||||||||| ||||||||||||||||||||||| |||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtccgt 36450836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 25566910 - 25566841
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    |||||| |||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||||||||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 22197743 - 22197815
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||| |||||||||| |||||||||| ||||||| ||||| |||||||||||||||| ||||||| ||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtc 22197815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 8343032 - 8342960
Alignment:
Q  97 acgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||| |||||  |||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg--gtgtcagtgtc 8342960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 24613579 - 24613509
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtg 169  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| ||||||||||||||||||| |||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 30271287 - 30271366
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    |||||||||| | |||||||| |||||||  | ||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 8343376 - 8343302
Alignment:
Q  97 acgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||| |||||||||| |||||||||| ||||||| ||||| |||||||||||| |||||| ||||| |||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtc 8343302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 4298887 - 4298952
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgt 164  Q
    |||||||||||||||| ||||| |||| ||||||| ||||| ||||||||| ||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgt 4298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 22204661 - 22204616
Alignment:
Q  135 ttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  22204661 ttttttaaattattagttgtgtcggcgtgtcagtgtccgtatccgt 22204616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 29447096 - 29447177
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||||||||||| |||||||||||||||| ||||| | || ||||||| ||| | |||||||||| ||||||| ||||||    
T  29447096 gtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 18407772 - 18407705
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||| ||||||| || ||||||| |||||| ||||||||||||||||||| |||| |||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgtc 18407705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 28745571 - 28745497
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcg 158  Q
    ||||||||||||||||||| ||||| ||||| ||||| | || ||||||| ||||| ||||||||||| ||||||    
T  28745571 gtccgacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtcg 28745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 30077387 - 30077477
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc-gtatccgttcttcat 187  Q
    |||||| |||||||||| ||||||| || |||||||  |||| ||||||||||||| || |||||||| |||||| |||||||| ||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtccagtatccgtgcttcat 30077477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 31557054 - 31556985
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtg 169  Q
    |||||||| ||||||| ||||||| || ||||||| ||||| ||||||||| |||||||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtga-tttttcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 4673411 - 4673498
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||| | ||| ||||| || ||||||| ||||||| || | | ||| ||||| ||||||||| |||||||||||||||||||||    
T  4673411 gtccgacatcaacaagacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtc 4673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 24858076 - 24857992
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt---aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| ||||||||||||| ||||| || ||||||| ||||||   ||||||||| |||||||||||||||  |||||||    
T  24858076 ccgacacgacaacgacacttgtatt-acactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgt 24857992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 27101553 - 27101495
Alignment:
Q  119 cactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||||| ||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtccatatc 27101495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 41831946 - 41832012
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||| ||||||| || ||||||| ||||| ||||||||| |||||||||| |||| ||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 4786338 - 4786411
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||| | || ||||||| || ||||||| ||| |||||||||||   |||||||||||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 13844596 - 13844669
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||| | || ||||||| || ||||||| ||| | ||||||||||| ||||||||||||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 21465485 - 21465412
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||| ||||||||||| ||||||||| |||||   || ||| ||| ||||| |||||||||||||||||    
T  21465485 gtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 4948711 - 4948659
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattag 150  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| ||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 18170482 - 18170558
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| ||||| ||||| | || ||||| | ||||| ||||| |||  |||||||||||||||||||||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18170558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 18634050 - 18634126
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| ||||| ||||| | || ||||| | ||||| ||||| |||  |||||||||||||||||||||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 24196628 - 24196676
Alignment:
Q  129 tgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||| ||||| |||||||||| |||||||||||||| |||||||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccgtatc 24196676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 35519797 - 35519865
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgt 156  Q
    |||||||||||||||| ||||| |  ||||| || ||| ||||||| ||||| ||||||||||||||||    
T  35519797 gacaccgacacgacactgacacatacatttatacaaaattatgtgattttttcaaattattagctgtgt 35519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 24362192 - 24362275
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||||  ||||| | || ||||||| || ||||||| | | | ||||||||||| ||||||||||||| |||||    
T  24362192 gacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtc 24362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 39954297 - 39954352
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| ||||||| ||| | ||||||||||| ||||||||||||| |||||    
T  39954297 ttacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 7442918 - 7442828
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| || || ||||| ||||||||| ||||||| || ||||| | ||| | ||||||||||| |||| ||| ||| |||||||||    
T  7442918 gtccgacactgatacaacaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgtccgt 7442828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 11927076 - 11927150
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgt 162  Q
    |||||| ||||||||||||||| | || ||||||| || ||||||| ||| | ||||||||| | ||||||||||    
T  11927076 gacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 25172684 - 25172774
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||  |||||||||||||||| | || ||||| |||||||||| | ||| | ||||||||||| ||||| || | ||||| |||||    
T  25172684 gtccgacattgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtatccgt 25172774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 20679396 - 20679473
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtat 176  Q
    ||||||||||||| || ||||||| || ||||||| ||| | ||||||||||  |||||| | |||||||||| ||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgtat 20679473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 24669492 - 24669419
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| ||||||| || ||||| | ||  | ||||||||| | ||||| |||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtc 24669419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 926788 - 926864
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||| || ||||||| ||  ||| || ||| | ||||||||||  |||| |||||||||||||||||    
T  926788 cgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgt 926864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 6065686 - 6065746
Alignment:
Q  127 tatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcat 187  Q
    ||||||| |||||  |||||||| |||| |||| ||| |||||||||||||||| ||||||    
T  6065686 tatgtgattttttagaattattaactgtatcggtgtgccagtgtccgtatccgtgcttcat 6065746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 14692531 - 14692440
Alignment:
Q  85 tccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||| |||| || |||||||| | || ||||||| || ||||| | ||| | ||||||||| ||||||| | |||||||||||||||||    
T  14692531 tccgacacagacatgataccgacacctatagttacactgaattatgtca-tttctcaaattattatctgtgtcagagtgtcagtgtccgtatc 14692440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 15023291 - 15023327
Alignment:
Q  144 ttattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||| |||||||| |||||||||||||||||||    
T  15023291 ttattagcagtgtcggcatgtcagtgtccgtatccgt 15023327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 27067286 - 27067322
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttaca 120  Q
    |||||||||||||||||||| |||||||||| |||||    
T  27067286 gtccgacaccgacacgacactgacacttgtaattaca 27067322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 30892492 - 30892540
Alignment:
Q  141 aaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||||||||| | ||||| ||||||||||| |||||||| ||||||||    
T  30892492 aaattattagcggcgtcggtgtgtcagtgtctgtatccgtacttcatag 30892540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 34897144 - 34897068
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||| |||||| | || ||||||| || ||||||| ||| | ||||||||||| |||||| |||||| ||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 39698614 - 39698509
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttct 183  Q
    |||||||||||||||||||| |||||||||| ||||||| || ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||    
T  39698614 gtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtgct 39698515  T
Q  184 tcatag 189  Q
    ||||||    
T  39698514 tcatag 39698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 36642748 - 36642838
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  36642748 gtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgt 36642838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 21522823 - 21522733
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  21522823 gtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgt 21522733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 21533389 - 21533299
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  21533389 gtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgt 21533299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 19579774 - 19579684
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||||||||||||||||| || ||||||| ||||||| ||| | |||||||||||||||||||||| |||||||||||    
T  19579774 gtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgt 19579684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 14674323 - 14674252
Alignment:
Q  103 ccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 14674252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 33178084 - 33178014
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 21191056 - 21191132
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||| |||||||||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgt 21191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 21351895 - 21351979
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||| |||||||||||||||| ||||||| || |||||||||||||  ||||||||| |||||||| ||||||||||||    
T  21351895 gacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 6247681 - 6247602
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| |||||||||| ||||||||||||||||||| ||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatc 6247602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 10298634 - 10298539
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcat 187  Q
    |||| |||||||||||||||||| ||||| |  | ||||||||||||| |||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  10298634 ccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccgcatccgtgcttcat 10298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 21542103 - 21542016
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||| |  ||||||||||||||| ||||||||| ||||| ||||    
T  21542103 gtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtc 21542016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 31084388 - 31084309
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||| ||||||||||| ||||| | || ||||||| ||||| |||||||||||||||||||||||||||||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 42893418 - 42893328
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    |||||||||||||||| |||||||  | ||||||| ||||| ||||||||||||||||||| ||||| |||||| ||||||| ||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtccatatccgtgcttcatag 42893328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 13287395 - 13287475
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||||| |||||||| ||||| |||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgt 13287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 19552535 - 19552619
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||| |||||||| |||  ||||| || ||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  19552535 gacaccgacacgacatcgacacttatat--acacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 19552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 37328830 - 37328920
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||||||||| |||| ||||||| || | ||||| ||||  |||||||| |||||||||| || |||||||||||    
T  37328830 gtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgt 37328920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 7677774 - 7677676
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcat 187  Q
    |||||||||||||||||||||||| || || |||| || ||||||| ||||| ||||||||||||||||||    ||| |||||||| ||||| ||||||    
T  7677774 gacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg----gtccgtgtccgtttccgtgcttcat 7677679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 11686011 - 11685925
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||| ||||||||||||| | || |||||||||| |||| |||||| | ||||||||||| |||||||| ||||||||||    
T  11686011 gtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 41633803 - 41633724
Alignment:
Q  89 acaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    ||||||| |||||||||||| ||||| ||||||| || ||||| | ||||| ||||||||||||||||||| ||||||||    
T  41633803 acaccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagt 41633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 17088356 - 17088250
Alignment:
Q  86 ccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgtatccgttctt 184  Q
    |||||||||||||||||  |||||||||| | |||||||| ||||||| |||||| |||||||||| |||||| | |||||  |||| ||||| || |||    
T  17088356 ccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtcagtgtgtccctgtcagtatcagtgctt 17088257  T
Q  185 catagat 191  Q
    |||||||    
T  17088256 catagat 17088250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 3966576 - 3966488
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||| |||||||||||||||| | || ||||||| || | ||||| ||| | ||||||||||| |||||||| |||||||||||    
T  3966576 gtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 12641743 - 12641655
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtat 176  Q
    |||||| ||||||||| ||||| || | ||| |||||| ||||||| ||||||||||||||| || ||||| ||||||| |||||||||    
T  12641743 gacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtcattgtccgtat 12641655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 21576745 - 21576817
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||| ||||||||||| ||||||| || ||||||| ||||| |||||||||||||||| ||||| |||||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgt 21576817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 8420086 - 8420011
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    ||||||||||||||||| ||||| | || ||||| | ||||| |||||||||||| ||||||||||||| ||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccg 8420011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 15382538 - 15382460
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||| ||| || ||| ||| ||||||  |||||||||||||||||||||||||| |||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgt 15382460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 22013455 - 22013397
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| ||||| | ||||  ||||||||||||||||||||||||||||||||||    
T  22013455 ttacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 22013397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 15884047 - 15883982
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtga-cttttttaaattattagctgtgtcggcgt 162  Q
    ||||||||||||||||| ||||||| || |||||||  |||||||||||||| |||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtcggcgt 15883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 24906305 - 24906373
Alignment:
Q  102 accgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||||| ||||||| || ||||| | ||||| ||||||||| |||||| |||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 41995542 - 41995457
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||| ||| |||||||||||  | ||||| | || ||||||| |||||  ||||||||| ||||||||||||||||||||    
T  41995542 gtccgacaccgatacggcaccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 43001865 - 43001777
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||  |||| ||||||||| ||||||| || ||||| | ||||| ||||||||||| |||||| | ||||||||||||| |||||    
T  43001865 ccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccgt 43001777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 7218271 - 7218334
Alignment:
Q  102 accgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    ||||||||||||| ||||||| || ||||||| || ||||||||||||||| ||||| ||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgtgtc 7218334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 43564940 - 43564860
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||||||||| || |||||||||| ||||||| ||||  |||||||  | ||||||||||||||||||| ||| |||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattat--gatgtgtcggcgtgtcagtgttcgtgtccgt 43564860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 5894827 - 5894892
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||||||||||||||||| ||| | |||| ||| ||| ||||| |||||||||| ||||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtc 5894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 17177025 - 17177098
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    ||||||||||||||| ||||| | || | | ||| ||||| |||||||||||||||| ||||| ||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccg 17177098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 21814334 - 21814253
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||||||||||||||||||||||| | || |||||||  | | ||||| ||| | |||  ||||||||||||||||||||    
T  21814334 gtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 21814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 30135389 - 30135305
Alignment:
Q  84 gtccgacacc--gacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtc 165  Q
    ||||||||||  |||| |||||||||||||||| ||||| | |  ||||||| |||||| |||||||||| ||||||||||||||    
T  30135389 gtccgacaccaggacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtc 30135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 16203795 - 16203871
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| | || |||||||||| |||| || ||| | ||||||||||| |||||||| ||| |||||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgt 16203871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 39205943 - 39205847
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcataga 190  Q
    ||||||||||| |||| | || ||||||  || ||| ||| ||| | ||||||||||| |||||| |||||| ||||| |||||||| |||||||||    
T  39205943 gacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccgtgcttcataga 39205847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 14422961 - 14422889
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||| ||| |||| || ||||||| || |||||||  ||||||||||||||||||| |||| ||||||||||||    
T  14422961 cgacatcgaaacttataattacactgaattatgtga--tttttaaattattagctgtatcggtgtgtcagtgtcc 14422889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 15410489 - 15410524
Alignment:
Q  139 ttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15410489 ttaaattattagcggtgtcggcgtgtcagtgtccgt 15410524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 16374338 - 16374433
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    |||||||||||||||| |||| ||||||| |  ||||| | |||||| |||||||| |  ||||| ||||| |||||| |||||| | ||||||||    
T  16374338 gacacgacaccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtcgacgtgttagtgtctgtatccatgcttcatag 16374433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 27144504 - 27144449
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| ||||||| ||  | ||||||||||| |||||||||||||||||||    
T  27144504 ttacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtc 27144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 4105310 - 4105240
Alignment:
Q  106 acacttgtatttacactaaaatatgtga-ctttttt-aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||| || ||||||| ||||||| |||||||||| | ||||||||||||||| |||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgt 4105240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 18592146 - 18592060
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||||||||||||| ||| | || ||||| | || ||||| | ||| ||||| ||||||| |||||||| | |||||||    
T  18592146 gtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgt 18592060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 2436985 - 2436908
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||||| | || | |||   || ||||||| ||||  ||||||||||| |||||||||||||||||||    
T  2436985 gacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 6326304 - 6326373
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| ||||||| || ||||| | ||| | |||||| ||||  |||||||||||||||||||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgt 6326373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 6770583 - 6770526
Alignment:
Q  117 tacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| || ||||||| ||| |||||||||||| |||||| | ||||||||||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgt 6770526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 30183611 - 30183530
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtat 176  Q
    |||||||||||||||||||| ||| ||  ||  ||||||  |||| |||||||||| ||||||||| | |||||||| ||||    
T  30183611 acacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggcatatcagtgtctgtat 30183530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 12160007 - 12159951
Alignment:
Q  102 accgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcg 158  Q
    ||||||| ||||| ||||| |||| ||||||  |||||||||||||||| |||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtcg 12159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 28588674 - 28588742
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtca 166  Q
    |||||||||||| | || ||||||| || ||||||| ||| | ||||||||| | ||||||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 16766770 - 16766682
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  16766770 gtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 9107356 - 9107446
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||||||||||||||| ||||||| || | ||||| ||||| |||||||||||||||||||||||| |||||||||    
T  9107356 gtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgt 9107446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 17841589 - 17841671
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||| |||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 17841671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 8365505 - 8365595
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| |||||||||||||||||||||||| ||||||  || |||||||  |||| |||||||||| |||||||||||||||||||||||    
T  8365505 gtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgt 8365595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 12696389 - 12696307
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| |||||||||| ||||||| || ||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 12696307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 10770670 - 10770748
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||| ||||| |||||||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtcc 10770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 7938174 - 7938101
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||||| || |||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 426514 - 426590
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||| | || ||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 426590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 9522963 - 9522871
Alignment:
Q  85 tccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||||||||| ||||||||||||||| ||||||| || ||||||| ||||||||||||||||  ||   ||||||||| ||||||||||    
T  9522963 tccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattagacgtacaggcgtgtcaatgtccgtatc 9522871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 28152157 - 28152082
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagctttgtcggcgtgtcagtgtccgt 28152082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 34595193 - 34595117
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| |||||||||| ||||||||||||||| |||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgt 34595117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 5970094 - 5970181
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||||||| ||| ||||| ||||||| || ||||||| ||||| ||||||||| |||||||| |||||| |||||    
T  5970094 gtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 16833365 - 16833294
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||| ||||||| || ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 3209441 - 3209367
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| | |||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtc 3209367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 7977830 - 7977900
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    ||||||||||||||||| ||||||| || ||||| | ||||| ||||||||||||||||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 7930368 - 7930288
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||| | || ||||||| ||||||| ||||| |||||||||  ||||||||| |||||||||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 8776973 - 8777049
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| ||||||||| ||||||| || | ||||| ||||| |||||||||| |||||||||||||||||||||||    
T  8776973 cgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 8777049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 21395294 - 21395381
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||| | ||| | ||||||||||| |||| |||||||| ||||||    
T  21395294 gtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtcc 21395381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 3398680 - 3398602
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| |||| || ||||||| || ||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  3398680 acacgacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgtgtcagtgtccgt 3398602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 5732510 - 5732584
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||||| | || |||||||||||||||||| ||| | ||||||||| | ||||||||||||||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtcc 5732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 8714053 - 8713971
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtc 165  Q
    ||||||||||||||||||||| ||| ||||| ||||||| || ||||||| |||||| ||||||||| |||||||| ||||||    
T  8714053 gtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcgacgtgtc 8713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 33340371 - 33340457
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||| |||||||  ||||||| || ||||| |||||||||||| ||||||||||||| | | ||||||||||||| ||||    
T  33340371 gtccgacaccggcacgacaatgacacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgt 33340457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 35125727 - 35125641
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||| |||||||  ||||||| || ||||| |||||||||||| ||||||||||||| | | ||||||||||||| ||||    
T  35125727 gtccgacaccggcacgacaatgacacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcggcgtgtctgtgt 35125641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 853859 - 853928
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcag 167  Q
    ||||||||||||||||| || |||| || ||||||| ||||| |||||||||| ||||||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcag 853928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 4878002 - 4877933
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtca 166  Q
    ||||||||||||||||| ||| ||| || |||||||||||||| ||||||||||||||||||| ||||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtca 4877933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 7265593 - 7265686
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatagat 191  Q
    |||||||||||| | || ||||||| || ||||||| ||| | ||||||||||| |||| |||||||||||||||| || ||| ||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgaatacgtgcttcatagat 7265686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 27904037 - 27904129
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgactttt--ttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    |||||||||| ||||| ||||||| || ||||||  ||||  |||||||||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtgtcaatgtccgtatccgtgctttatag 27904129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 7801156 - 7801228
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||||||||| |||| || || ||||||| ||||| |||||||||| ||||||||||||| |||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 32978899 - 32978967
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtc 165  Q
    ||||||||||||||||| ||||||| || ||||||  |||||| |||||||||||||||||||||||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgtgtc 32978967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 9911524 - 9911587
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgactt-ttttaaattattagctgtgt 156  Q
    ||||||||||||||||||||| ||||||| || ||||||| || ||||||||||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 19147432 - 19147495
Alignment:
Q  127 tatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcataga 190  Q
    ||||||| ||| | ||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  19147432 tatgtgattttctcaaattattagctgtgtccgtgtgtcagtgtccgtatccgtgcttcataga 19147495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 31959213 - 31959146
Alignment:
Q  103 ccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||| |||||||  | ||||||| ||||| ||||||||||||||| ||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 9658920 - 9658862
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  9658920 ttacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgt 9658862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 9027241 - 9027161
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||| | || ||||||  || ||||||| | | | ||||||||||| ||||||||||||||||||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgt 9027161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 23771637 - 23771562
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| ||||| ||||||| || ||| | | ||||||||||||||| ||||||||||||||| ||||||||    
T  23771637 cgacaccgacatttgtaattacactgaagtatataa-ttttttaaattattaactgtgtcggcgtgtccgtgtccgt 23771562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattatta 149  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| |||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 6898281 - 6898360
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||||||||||||||| ||||||| || ||||| | || || ||||||||||  ||||| |||||||||||||| ||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtccatatc 6898360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 10842573 - 10842518
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| ||||||| ||||| ||||||||||| ||||||||||||| |||||    
T  10842573 ttacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 17302620 - 17302533
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||||  |||||||||| ||||| | || ||||||| |||||| |||||||||| |||||| |||||||||||| ||| |||||    
T  17302620 gacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgtccgt 17302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 26562759 - 26562676
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||||||| |||||| | || ||||||| || ||||||| ||| | ||||| ||||| ||||||||||||| ||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 1681811 - 1681745
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||| ||||||| || || |||| ||||| |||||||||| ||||||||||||| |||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 17435272 - 17435182
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||| |||||  ||||  ||||||||| ||||||| || ||||| | ||||| |||||||||||| ||||| ||| |||||||||||    
T  17435272 gtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgt 17435182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 18252742 - 18252824
Alignment:
Q  89 acaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||| ||||||| |||||||| |||| |||||||||| ||||| | ||||||||||||||| | || |||| ||||| |||||    
T  18252742 acacagacacgataccgacacctgtaattacactaaattatgtcatttttttaaattattatcggtatcggagtgtctgtgtc 18252824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 1191706 - 1191763
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcg 161  Q
    ||||||||||| ||||||| || | ||||| ||||| |||||||||||||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 1700411 - 1700362
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattat 147  Q
    |||||||||||||| || ||||||| |||||||||| |||||||||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 16488576 - 16488657
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||||||||||||||||||||||| | || |||||||  | | ||||| ||| | |||  ||||||||||||||||||||    
T  16488576 gtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 16488657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 24645539 - 24645466
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||  || ||| || ||||||| |||||| |||||||||||||||||| | ||||||||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtcgacatgtcagtgtc 24645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 33001289 - 33001357
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtca 166  Q
    |||||||||||| | || ||||| | || ||||||| ||||| ||||||||||| ||||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 15489733 - 15489808
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||| ||||| | || | ||| | ||||| |||||||||| ||||||| ||||| |||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgt 15489808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 28715354 - 28715295
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||||||||||| ||||||| || ||||| | ||||| ||||||||||| |||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 10294180 - 10294090
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| ||||||||||||||| | || ||||| | ||||||| || | | | ||||||||||| || ||||| ||||||| |||||    
T  10294180 gtccgacaccaacacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgt 10294090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 12868706 - 12868748
Alignment:
Q  129 tgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||    
T  12868706 tgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 12868748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 19040411 - 19040341
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    |||||| ||||| | || ||||||| || ||||||| ||| | ||||||||||| ||||||||||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 31429004 - 31429085
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgactttt-ttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||| ||| ||||| ||||||| || ||||||| |||| ||||||||||||||| || |||||||||||||| || |||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgattttttttaaattattagctgggt-ggcgtgtcagtgtcagtgtccgt 31429085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 34073337 - 34073423
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||| | | || ||||||| || |||| || ||| | |||||||||||  ||| ||| |||||||||||||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgt 34073423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 5626696 - 5626769
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||| | |||||||||| || || |||| ||| | |||  ||||| ||||||||||||||||||||    
T  5626696 cgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtc 5626769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 7086858 - 7086781
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||| |||||||||| | || |||||||||| ||||||| ||| | ||||||||||| ||| || |||||| |||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtc 7086781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 17341671 - 17341740
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| || ||||||| || ||||||| ||| | ||||||||| | ||||||||||||||||| ||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgt 17341740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 18367905 - 18367828
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||||||||||||||||||| | || |||||||  | | ||||| ||| | |||  ||||||||||||||||||||    
T  18367905 gacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 8931592 - 8931668
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgt 164  Q
    ||||||||||||||| |||||| | || ||| ||| || ||||| | ||| | ||||| ||||||||||||||||||    
T  8931592 gacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 20371139 - 20371191
Alignment:
Q  127 tatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccg 179  Q
    ||||||| ||| | ||||||||||| |||||||||||||| ||||||| ||||    
T  20371139 tatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtccg 20371191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 10335286 - 10335362
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgt 10335362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 10318035 - 10318116
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  10318035 cgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 10318116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 33359820 - 33359747
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  33359820 cgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtc 33359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 27505309 - 27505214
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||||||||||||||||||| ||||||| || ||||||| ||||  |||||||||||||||||||| |||| || ||||||||||| ||||||||    
T  27505309 gacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggcttgtccgtatccgtatccgtgcttcatag 27505214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 4987277 - 4987363
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||| ||||||||||| |||| ||||||||| ||||||| || ||||||| ||||| ||||||||||||||||||||||||||||||    
T  4987277 gtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 14209186 - 14209105
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||||||||||||||||| |||||||||| ||||||| || ||||||| ||||| |||||||||| ||||||||||||||    
T  14209186 gtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 55401134 - 55401058
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| |||||||||| ||||||||||| |||||||||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgt 55401058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 14829762 - 14829676
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||| |||||||||||||||||||||||||| ||||  | || ||||||| ||||| |||||||||||||||||||||||||||||||    
T  14829762 gtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 14747625 - 14747547
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| ||| |||||| |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 15796280 - 15796370
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| |||||||||||||| ||||| ||||||| || ||| ||| ||||| ||||||||| |||||||||||||||| |||||||    
T  15796280 gtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgt 15796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 28918062 - 28917984
Alignment:
Q  96 cacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||||| ||||||||||||||| |||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgt 28917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 34910390 - 34910277
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc------agtgtccgtatc 177  Q
    |||||||||||| ||||||||||| |||||| ||||||| || ||||||| ||||| |||||||||| ||||||||||||||       |||||||||||    
T  34910390 gtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcgtgtctggtgtccgtatc 34910291  T
Q  178 cgttcttcatagat 191  Q
    ||| ||||||||||    
T  34910290 cgtgcttcatagat 34910277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 1509608 - 1509539
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||||    
T  1509608 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 10268487 - 10268560
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||| |||||||||| |||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 16000016 - 16000089
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| ||||||| || ||||| | |||||||||||||||| ||||||||||||||||||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtc 16000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 8587021 - 8587097
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| |||||| ||| |||||||||||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgt 8587097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 34185109 - 34185196
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||  ||||||||||||||||||||| ||||||| || | ||||| ||||| ||||||||||| |||||||||||||| ||||    
T  34185109 gtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 51206353 - 51206432
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccg 179  Q
    ||||||||||||||||||||||||| || ||||||| ||||| |||||||||||||||||   ||||| |||||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc--agtgtccgtgtccgtatccg 51206432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 10955011 - 10954930
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccg 179  Q
    ||||||||||||||||  ||||||| || ||||||| ||||| |||||||||| ||||||||||||||||||| ||| ||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccg 10954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 21479177 - 21479104
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||| ||| ||||||| || | ||||| ||||| |||||||||||||||||||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 25948881 - 25948978
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||||||||||| |||||| || ||||||| || ||||||| ||||| ||||||||||| || ||||| ||||||||||||| || || ||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtctgtgcttcatag 25948978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 39756299 - 39756222
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||||||| ||| | |||| ||||||| |||||||||||||||  | ||||||||||||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc 39756222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 26508166 - 26508090
Alignment:
Q  101 caccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||||||||| ||||||| || ||||||| ||||| ||||||||||||||||| |||||||||| || |||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatc 26508090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 41961636 - 41961723
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||| |||||||||||||||||||||||| ||||||  ||  ||||||  |||| |||||||||| |||| |||||||||||||||    
T  41961636 gtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtc 41961723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 14216965 - 14216875
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||  ||||||||| |||||||||| ||||||| || ||| |||  |||| |||||||||| ||||||| |||||||||||||||    
T  14216965 gtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgt 14216875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 14223094 - 14223004
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||  ||||||||| |||||||||| ||||||| || ||| |||  |||| |||||||||| ||||||| |||||||||||||||    
T  14223094 gtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgt 14223004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 14832172 - 14832082
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| ||||||||||||| |||||||||| ||||| | |  ||||||| ||||| |||||||||||||| |||||||||| || |||||    
T  14832172 gtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgt 14832082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 28812584 - 28812499
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| ||||||||||||||||||||  |||||| || ||||||| || || |||||||||| |||||||||||||| ||||||||    
T  28812584 gacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt 28812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 55213033 - 55212960
Alignment:
Q  86 ccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggc 160  Q
    ||||||||||||| ||||||||||||||| || ||||||| ||||||| ||||| ||||||||| ||||||||||    
T  55213033 ccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggc 55212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 49651780 - 49651853
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    ||||||||||||||||||||||| ||||| | || ||||||| ||||| ||||||||||| |||||||| ||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 26492205 - 26492281
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||| ||||||| || | | ||| ||||| |||||||||||| |||||||||||||||||||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgt 26492281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 20503522 - 20503451
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||| ||||||| || ||||| | ||||| |||||||| | ||||||||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 3164020 - 3164101
Alignment:
Q  93 cgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| | ||||||||  ||||||| || ||||||| ||||| |||||||||||||||||| |||| || |||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgt 3164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 22774063 - 22774152
Alignment:
Q  91 accgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||| ||||||||||||| || ||||||| |||||||||||||| |  |||||||||  |||||| |||||| ||||| || |||||    
T  22774063 accgacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtctgtgtccgt 22774152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 3610707 - 3610619
Alignment:
Q  84 gtccgacaccgacacg-acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||| ||| ||| ||||||| ||| ||||||| |  ||||| | ||||||||||||||| |||||| ||||||||||||||    
T  3610707 gtccgacaccgatacggacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtc 3610619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 8383316 - 8383240
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||| || ||||||| || ||| ||| ||| | ||||||||||| |||||||||||||| |||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgt 8383240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 35994744 - 35994811
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||| ||||| |||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtcc 35994811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 40052362 - 40052318
Alignment:
Q  127 tatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||    
T  40052362 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 750604 - 750695
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc-agtgtccgt 174  Q
    |||||| |||||||||||||||||||||||| || ||   || |||||||  |||| |||||||||| ||||||| |||||| |||||||||    
T  750604 gtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgt 750695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 174
Target Start/End: Original strand, 3865593 - 3865632
Alignment:
Q  135 ttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  3865593 tttttcaaattattagctgtgtcggcgtgtcagtgtccgt 3865632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 11610573 - 11610510
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    ||||||||||  |||||| || ||||||| ||||||||||||||||| |||| |||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagt 11610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 18427008 - 18426917
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    |||||||||||  | || ||||||  || ||||||| ||||| ||||||||||  ||||||||||||| ||||||||||| || ||||||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgtatctgtgcttcatag 18426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 23870579 - 23870650
Alignment:
Q  118 acactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||| || ||| ||| ||||| ||||||||||| |||||| |||||| |||||||||||||| ||||||||    
T  23870579 acactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccgtgcttcatag 23870650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 25775568 - 25775493
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgact-tttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||||||||| ||||||| || ||||||| | |||| |||||||||  ||||| |||||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 28678372 - 28678289
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||| ||||||||||||||| |  | ||| |||||| ||||||| ||| ||||||||||||| | |||||| ||||||||||    
T  28678372 gacaccaacacgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgtc 28678289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 8039821 - 8039903
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtca 166  Q
    |||||||||||||||||||||||||| | || ||||||| || ||| | | ||| | ||||||||||| |||| |||||||||    
T  8039821 gtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 16789085 - 16788995
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||||||| |||||| || ||||||| || ||| ||| ||||||||||||||| || | |||| || ||||| |||||    
T  16789085 gtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattattaactatatcggtgtatcagtatccgt 16788995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 21256984 - 21257058
Alignment:
Q  96 cacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||| ||||||||||||| ||| ||| || ||||||| ||||| |||||||||||||||||  |||||| ||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcatcgtgtcggtgt 21257058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 5339161 - 5339077
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcata 188  Q
    |||||||||| |||||| |||| ||||||| ||| | ||||||||| |  |||||||||||| || ||||||| ||| |||||||    
T  5339161 cgacacttgtttttacattaaattatgtgattttctcaaattattaacaatgtcggcgtgtctgtatccgtattcgtgcttcata 5339077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 14979222 - 14979166
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||| || ||||||| ||||| ||||||||||||||||||||||| || |||||    
T  14979222 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtcc 14979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 25064980 - 25064895
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| |||||| ||| |||| |  | |||||||||| ||||||| ||||| |||| |||||| |||||||||||||| ||||    
T  25064980 gtccgacaccaacacgataccaacacat--aattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtc 25064895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 4990964 - 4991043
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| |||||||||||| ||||||| || ||||| | ||| | ||| ||||||| ||||||| |||||||| |||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgt 4991043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 9800106 - 9800027
Alignment:
Q  91 accgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||||||||||||  | ||||||  || ||||| | ||| | ||||||||||  ||||||||||||||||||    
T  9800106 accgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgt 9800027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 35312108 - 35312037
Alignment:
Q  103 ccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| ||||||| || ||||| || ||||||||||||||  ||||||| | | |||||||||||    
T  35312108 ccgacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgt 35312037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 7928509 - 7928448
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcgg 159  Q
    |||||||||||| | || ||||||| || ||||||| ||||| ||||||||||| |||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 32400743 - 32400780
Alignment:
Q  136 tttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  32400743 ttttcaaattattagctgtgtcgccgtgtcagtgtccg 32400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 1514671 - 1514603
Alignment:
Q  103 ccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||| || |||||||||| |||| |  | ||| ||||||||||| ||||||||||||| |||||    
T  1514671 ccgacacttataattacactaaattatgcgtttctttcaaattattagcggtgtcggcgtgtccgtgtc 1514603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 34307786 - 34307846
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgt 164  Q
    |||||||| || ||||||| |||||||||| ||| | ||||||||||| ||||| ||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 49505154 - 49505230
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| ||||| | || |||||||||| ||||||| ||| | ||||||||||| || || ||||||| ||||||||    
T  49505154 cgacactgacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtccgt 49505230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 24339715 - 24339627
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||||||||| |||||    
T  24339715 gtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtcc 24339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 13770756 - 13770674
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| ||||||||||| ||||||| || ||||| | |||||||||||||||||||||||||||| |||||||||||    
T  13770756 ccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgt 13770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 43027465 - 43027545
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||||||| |||| |||||||||||||||    
T  43027465 gacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgt 43027545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 9408324 - 9408407
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||| ||||| |||||||||  |||||||| |||||||||||    
T  9408324 gacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 11061077 - 11061152
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||| ||| |||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgt 11061152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 15680868 - 15680794
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||||||| || |||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtcc 15680794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 5409830 - 5409910
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||||||||||||||| || |||| || ||||||| ||||| |||||||||||||| || ||||||||||||||    
T  5409830 ccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 11272572 - 11272659
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaa--atatgtgacttttttaaattattagctgtgtcggcgtgtcagtg 169  Q
    ||||||||||||||||||||||||||||||| ||||||| ||  |||||||| ||||| ||||||| || ||||||||||| ||||||    
T  11272572 gtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgtctcagtg 11272659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 7438775 - 7438693
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||| |||||||||||||||| ||||| | || ||||||| ||||| ||||||||| |||||||||| |||||||||    
T  7438775 gacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 25481961 - 25481887
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||| ||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||||||||| |||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 18215182 - 18215262
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||||  ||||||  | ||||||| ||||| ||||||||||||| |||||||||| |||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgt 18215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 21560572 - 21560484
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-----aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||| |||||||||||||||||| ||||||| || ||||||| ||||||     |||||||||||||| ||||||||||||||||    
T  21560572 gacaccgatacgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagtgtc 21560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 27945104 - 27945024
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||||| ||||||| || ||||| | ||| | ||||||||||  ||||||||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgt 27945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 2334322 - 2334238
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggcgtgtcag 167  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||  ||||||||| || ||||| ||||||||    
T  2334322 gtccgacac-gacacgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtgtcag 2334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 19213862 - 19213771
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatagat 191  Q
    |||||||||||||||||||||||||  | ||||||| ||||| ||||||||||| |||||   ||||| ||||||| |||||| ||||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagcagtgtc--agtgtccgtgtccgcatccgtgcttcatagat 19213771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 7197297 - 7197370
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| ||||| | || ||  ||| |||||||||||||||||||||||||||||||| ||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtc 7197370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 26033451 - 26033516
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctg 153  Q
    ||||||||||||| ||||||||||||| ||||||| || ||||||| ||||| |||||||||||||    
T  26033451 gacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 24105737 - 24105661
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||| |||||||||||| ||||||| ||  |||  | ||||| ||||||||||||||||||||||||||||||||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 24105661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 32308193 - 32308105
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||| ||||||||||||||| ||||| |  | ||||||| || ||||||| ||| | ||||||||||| ||||||||||||||||||||    
T  32308193 gtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 6630898 - 6630985
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| |||||||| |||||| | || ||||||| || || |||||||| | ||||||||||  |||||||||||||||||||    
T  6630898 gtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 9778565 - 9778500
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||||||||||||||||| ||| ||| || ||||||| ||||| ||||||| |||||||||    
T  9778565 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 11665429 - 11665536
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgt-------cagtgtccgtatccg 179  Q
    ||||||||||| |||| |||||||| || ||| ||| || ||||||| ||||| |||||||||| |||||| ||||||       |||||||||||||||    
T  11665429 cgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtcaatatccagtgtccgtatccg 11665528  T
Q  180 ttcttcat 187  Q
    ||||||||    
T  11665529 ttcttcat 11665536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 18039067 - 18039006
Alignment:
Q  89 acaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattatta 149  Q
    |||||||||||||||||||||||||| ||||||| || ||||||| |||||| |||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 23191942 - 23191877
Alignment:
Q  111 tgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtat 176  Q
    |||| ||||||| |||||||||| ||| | ||||||||||| |||||||||| |||||||||||||    
T  23191942 tgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgtat 23191877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 19992061 - 19992001
Alignment:
Q  97 acgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||||||||| || ||||||| |||||||||| ||| | |||||||||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 21930701 - 21930614
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||| |||| ||||||||| ||||||||||| ||| | | || ||| | | ||||||||||||||||||| ||||||||||||||||||    
T  21930701 gtccaacactgacacgacatcgacacttgtaattaaaatgaattatctaa-ttttttaaattattagctgagtcggcgtgtcagtgtcc 21930614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 10042999 - 10042920
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||| || |||| ||||| ||||||| ||| | ||||||||||  |||||||||||| |||||||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgt 10042920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 21864867 - 21864789
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||| ||||||||||| |||||||||| ||| ||| ||||||  ||||||||||||||||| | ||||| ||||||||    
T  21864867 cgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgt 21864789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 28155629 - 28155538
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||||||||||||||| ||||||  || ||||| | ||| | ||||||||||| ||||||||||||  | ||| |||||||| ||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgttcgagtcagtatccgtgcttcatag 28155538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 32094014 - 32094093
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||||||||| ||||| ||||||| || ||||||| |||||| |||||||||| ||||| ||| ||| |||||    
T  32094014 ccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgt 32094093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 33994270 - 33994199
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||||||| || |||| || |||||||| |||| |||||| ||| || ||||||||||||||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgt 33994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 1433519 - 1433437
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||| | || |||||| |||  |||||| ||| | ||||||||| | |||||||||||||| |||||||    
T  1433519 ccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgt 1433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 3991384 - 3991322
Alignment:
Q  97 acgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcgg 159  Q
    |||||||||||||||||| ||| ||| || ||||||| ||||| |||||||||| ||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 11831505 - 11831431
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcg 158  Q
    |||||||||||| |||||||  | ||||||| |||||||||| ||| ||| ||||| |||||||||| |||||||    
T  11831505 gtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattattagttgtgtcg 11831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 41020537 - 41020483
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||| |||||||||||    
T  41020537 ttacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 25822728 - 25822647
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||| ||||| |||||||||||||||||| ||||||| || | ||    ||||| |||||||||| ||||||||||||||    
T  25822728 gtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 9482993 - 9482905
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttca 186  Q
    |||||||||||| | || ||||||| || | ||||| ||| | ||||||| |||  |||||| |||||||||||||||||||| |||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgtatccgtgcttca 9482905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 20545266 - 20545326
Alignment:
Q  128 atgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcata 188  Q
    |||||| ||||| ||||||||||| |||| |||||||| || ||||||||||| |||||||    
T  20545266 atgtgattttttcaaattattagcggtgttggcgtgtccgtatccgtatccgtgcttcata 20545326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 26733363 - 26733287
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| | || ||| ||| || ||||||| ||| | ||||||||||| |||||| |||||||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgt 26733287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 8160486 - 8160416
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    |||||||||||||| ||| |||| | || |||||||||| ||||| | ||| ||||||||||||| |||||    
T  8160486 cgacaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 5236049 - 5235972
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||| |  | || |||||||||| ||| | | ||| ||||||||||||| |||||| ||||||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtc 5235972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 12010023 - 12010056
Alignment:
Q  141 aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||||||||||||    
T  12010023 aaattattagctgtgtcagcgtgtcagtgtccgt 12010056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 13557750 - 13557817
Alignment:
Q  107 cacttgtatttacactaaaatatgtgactttt---ttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||| ||||||| || ||||||| ||||   |||||||||||| | ||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtc 13557817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 35862024 - 35861951
Alignment:
Q  97 acgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||| |||||||  | ||||| | || ||||||| ||||| |||||||||| ||||||||||||| |||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 2948739 - 2948651
Alignment:
Q  101 caccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||||||| | || |||||||||| || |||| ||| | ||||||| ||| |||||||||||||||| ||  ||||| | ||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagtatctatatccatgcttcatag 2948651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 5548741 - 5548646
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcata 188  Q
    |||||||||||| ||||| | || ||||||| || ||| ||| ||| | ||||||| ||| |||||||| | | ||||||||||||||| |||||||    
T  5548741 ccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat-ttagtgtccgtatccgtgcttcata 5548646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 18013070 - 18013150
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| ||||| | || ||||||| || ||||| | ||||||||||||||||  ||||| |  |||||||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgt 18013150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 20549850 - 20549778
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||| | || ||||||| || || |||| ||| | ||||||||||| ||||||| ||||||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 21826303 - 21826259
Alignment:
Q  127 tatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||| ||||||||||||||||  |||||||||||| ||||||    
T  21826303 tatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtc 21826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 22602705 - 22602781
Alignment:
Q  93 cgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtg 169  Q
    ||||||||||||||||| | || ||||||| || ||||||| ||| | |||| |||  | |||||||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 40287361 - 40287428
Alignment:
Q  102 accgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||||| ||||||| || ||| ||| ||||| |||||||| | |||||||||||||| ||||    
T  40287361 accgacacttgtaattacactgaa-tatatgattttttcaaattattcgttgtgtcggcgtgtccgtgt 40287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 47989570 - 47989484
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||  ||||||||||||||||||||    
T  47989570 gtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 46348383 - 46348465
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||||||||||| |||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 46348465  T

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Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 48040465 - 48040538
Alignment:
Q  102 accgacacttgtatttacactaaaatatgtga-cttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgt 48040538  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 1704988 - 1705083
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||||||||||||||||||| |||| || || ||||||| ||||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgcttcatag 1705083  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 1815315 - 1815225
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    |||||||||||||||| ||||||| || ||||||| ||||| |||| ||||  ||||||||||||||||||||||||||||| ||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatccgtgcttcatag 1815225  T

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Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 22881616 - 22881689
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 18556446 - 18556538
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||| ||||||||| | ||||||| ||||| |||| |||||||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  18556446 gacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 18556538  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 22515887 - 22515963
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||||| ||||||| ||||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgt 22515963  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 113363 - 113289
Alignment:
Q  93 cgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcag 167  Q
    |||||||||||| ||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

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Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 1486703 - 1486785
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||| || ||||||| || ||||||| ||||| ||||||||||||||||| |||||||||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgt 1486785  T

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Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 5376486 - 5376576
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||| ||||||||||||||||||| || ||||||| || ||||| | ||| ||||||||||||| |||||||||||| |||||||||    
T  5376486 gtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgt 5376576  T

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Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 6612157 - 6612247
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||| |||||||||||||||||||||| ||||||| || ||||| | ||||| ||||||||| |||| ||||||||||| |||||||    
T  6612157 gtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgt 6612247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 31672895 - 31672989
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt-ccgtatccgttcttcatagat 191  Q
    ||||||||| ||||||| ||||||| || || |||| ||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcccgtatccgtgcttcatagat 31672989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 9103698 - 9103624
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    ||||||||||||||||||| | |||||| ||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  9103698 cgacaccgacacttgtattaa-actaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

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Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 40917822 - 40917734
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||| |||||||||||||||||| ||||||| ||||||| || |  |||| ||||| |||||||||||||||||||||||||||| |||||    
T  40917822 gtccaacaccgacacgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgt 40917734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 48450592 - 48450663
Alignment:
Q  103 ccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| |||||||||| ||||| | ||||| |||||||||||||||| |||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgt 48450663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 5944356 - 5944267
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||| || ||||||||||||||||||| || ||||||| || ||||||| ||||||  ||||||||||||||| |||||||||||||||    
T  5944356 gtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtc 5944267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 31694696 - 31694785
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||||||||||||||||| ||| ||| || ||||||| ||||||  |||||||||||| ||||| ||| ||||||||    
T  31694696 gtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc 31694785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||||| |||||| ||||||| |||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 38078661 - 38078742
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccg 179  Q
    ||||||||||||||||| ||||| | || ||||||| ||||| |||||||||||||||||| ||||||||||| ||| ||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccg 38078742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 17778616 - 17778513
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcgg----cgtgtcagtgtccgtatccgttc 182  Q
    |||||||||||||||||||||||||||| |||||||    ||||||| ||||| ||||||||||||||||| |    |||||| |||||||||||||| |    
T  17778616 cgacaccgacacgacaccgacacttgtaattacact---gtatgtgattttttcaaattattagctgtgtctgtctccgtgtc-gtgtccgtatccgtgc 17778521  T
Q  183 ttcataga 190  Q
    ||||||||    
T  17778520 ttcataga 17778513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 19058856 - 19058924
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtca 166  Q
    ||||||||||||||||| ||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 42359449 - 42359525
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || | ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgt 42359525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 39953146 - 39953237
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    |||||||||||| |  | |||||||||| ||||||| ||| | ||||||||||| |||||||||| || |||||| ||||||||||||||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgtttccgtgtccatatccgttcttcatag 39953237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 14359529 - 14359594
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtc 14359594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 37598890 - 37598816
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    |||||||||||||| || ||||||| || | ||||| ||||| |||||||||| ||||||||||||||||||||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 398783 - 398841
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| || ||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  398783 ttacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgt 398841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 13011223 - 13011288
Alignment:
Q  106 acacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||| ||||||| || ||||||| |||||| |||||||||||||||||||| |||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgt 13011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 35702588 - 35702661
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||| |||||||||| ||||||| || ||| |||  |||| |||||||||||||||||||| ||||||||||    
T  35702588 cgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtgtc 35702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 41877470 - 41877543
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| |||||||||| ||||| | ||| | ||||||||||| ||||||||||  |||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtc 41877543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 5927340 - 5927416
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| |||||||||| ||||| |||| ||| ||| ||||| ||||||||||| ||||  ||||||||||||||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgt 5927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 28273074 - 28273162
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||| ||| | |||||||||||||||| ||||||| || ||| ||| ||||| |||| ||||| |||||| || |||||||||||    
T  28273074 gtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtcc 28273162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 36878519 - 36878447
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||| | || ||||||| || ||||||| ||| | ||||||||||| |||||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 51410084 - 51410016
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtc 165  Q
    ||||||||||||||||| ||||||| || ||||||| |||||| |||||||||| ||||||||| ||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtc 51410016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 13997940 - 13997869
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| | || ||||||| || ||||||| |||||||||| |||| | |||||||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 31015097 - 31015026
Alignment:
Q  103 ccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| ||||||| || ||||||| ||| | |||||||||||||||| |||| ||||||| ||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgt 31015026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 38503386 - 38503303
Alignment:
Q  91 accgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| ||||||||||| | || ||||||| |||||| ||| ||| | ||||||||||| ||||||| |||| |||||||||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgt 38503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 6332740 - 6332671
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||| |||||||||||| ||||||| ||||||| || ||||||| ||||| |||||||||| ||||||    
T  6332740 cgacaccaacacgacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 15449218 - 15449272
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttt 138  Q
    |||||||||||| ||||||| |||||||||| |||||||||| ||||||| ||||    
T  15449218 gtccgacaccgatacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 21378635 - 21378561
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||| ||||||| || ||||| | ||||| || |||||||||||||||| |||||  |||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgt 21378561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 32434718 - 32434792
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcgg-cgtgtcagtgtccg 173  Q
    |||| |||||||||| ||||| | || ||||||||||||| |||||||||| ||||||||  |||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccg 32434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 2896140 - 2896197
Alignment:
Q  117 tacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| || ||||||| ||| | ||||||||||| ||||||||||||||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 2896197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 21032279 - 21032187
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||||| |||||||||||||| ||||| ||| | | || || || | |||||| |||||||| ||||||| | |||||||||||||||||    
T  21032279 gtccgacacccacacgacaccgacatttgtaattatatttaattaagt-aatttttttaattattaactgtgtcagtgtgtcagtgtccgtatc 21032187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 6427413 - 6427333
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| |||| | || ||||| | || ||||||| ||| | ||||||||||| |||| |||||||||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgt 6427333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 9629886 - 9629974
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||| ||||||||||||||||||| || | ||||| || ||| ||| ||| | ||||||||||| ||||||  ||||| ||||||    
T  9629886 gtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtcc 9629974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 40258934 - 40258994
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcgg 159  Q
    |||||||||||||||| ||||||| || ||||||| ||||| |||||||||  ||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 17754384 - 17754301
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcag 167  Q
    |||| |||||||||| |||| ||||| | || ||||||| || ||||| | ||||| ||||||||||| ||||||| |||||||    
T  17754384 gtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcag 17754301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 18471355 - 18471281
Alignment:
Q  102 accgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||| ||| ||| || ||||||| ||||||  |||||||||||||||||| || |||| |||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgt 18471281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 30359441 - 30359374
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||| | |||||||||| ||||||| ||||| ||||||| || |||| ||| |||||||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtc 30359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 44482303 - 44482240
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattat 147  Q
    |||||||||||||||||||||||||| | || ||||||| || ||||||| ||| | |||||||    
T  44482303 gtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 2218302 - 2218264
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtg 132  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  2218302 gacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 10572579 - 10572661
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||| |||| |||||||||| | || ||||||  || ||||||| ||| | ||||||||||  ||||||||||||||||||    
T  10572579 gacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 12443478 - 12443536
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| || ||||||| ||| | ||||||||||||||||||||||||| || |||||    
T  12443478 ttacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgt 12443536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 15641060 - 15641106
Alignment:
Q  128 atgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||    
T  15641060 atgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 18337388 - 18337338
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattatt 148  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| ||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 25272544 - 25272482
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||||||||||| || |||||||||| ||||||| ||| | ||||| ||| |||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtc 25272482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 25361959 - 25361881
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgt 162  Q
    |||||||||||||||||||| ||||| | || ||||||| || ||||||| ||| | ||||||| ||  ||||||||||    
T  25361959 gtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 9828113 - 9828036
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    ||||| |||||||||||||||| |  | ||||||| || ||||||| ||| | ||||||||||  |||||||||||||    
T  9828113 gacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 15323225 - 15323148
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||| || |||||||  | |||||||||| ||||||| ||||| ||||||||| |||| ||| | |||||||||||    
T  15323225 acacgatacagacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtcc 15323148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 29144395 - 29144440
Alignment:
Q  135 ttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||| |||||||||||||||||||||| |||||||| || |||||    
T  29144395 tttttcaaattattagctgtgtcggcgtatcagtgtcagtgtccgt 29144440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 34257928 - 34257989
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||||| ||||||| ||| ||||||||||| | |||||| ||||||| | ||||||||    
T  34257928 ttacactaaattatgtgattttattaaattattaacggtgtcgacgtgtcaatatccgtatc 34257989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 24334705 - 24334781
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    ||||||||||||||||| ||||||| || ||||    |||||| |||| |||||||||||||| ||||| |||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggtgtgtccgtgtccg 24334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 34371785 - 34371714
Alignment:
Q  85 tccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||| ||||||||||||||| | || ||||||| || ||||||| |||| | |||||||||| |||||    
T  34371785 tccgacaccaacacgacaccgacacatataattacactgaattatgtga-ttttctcaattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 52903308 - 52903232
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||| | || ||||||| || ||| ||| ||| ||||||||||| | || ||||||||| |||||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgt 52903232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 241667 - 241577
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| ||||||||||||||||  || |||||||||| ||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  241667 gtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 348122 - 348077
Alignment:
Q  135 ttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||||| ||||||| || || ||||||||||||||||||||    
T  348122 ttttttaaatttttagctgggttggtgtgtcagtgtccgtatccgt 348077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 20239 - 20155
Alignment:
Q  90 caccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||| |||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 20155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 20539672 - 20539750
Alignment:
Q  96 cacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||||| |||||||||| ||| ||| ||||| |||||||||||||||||| |||||||||||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgt 20539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 6940310 - 6940238
Alignment:
Q  102 accgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||| ||||||| || ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgt 6940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 14996217 - 14996300
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| |||||||||||||||| |||||||||| ||| ||| |||||| |||||||||||||||||||| |||||||||||||    
T  14996217 ccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgt 14996300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 27520028 - 27520083
Alignment:
Q  190 atggtaccttactgctcacggaagtgcttcatgaagaggtttgtcgcacacaggtt 245  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27520028 atggtaccttattgctcacggaagtgcttcatgaagaggtttgtcgcacacaggtt 27520083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 24894454 - 24894372
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||| |||||| || || |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24894454 ccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgt 24894372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 30717516 - 30717606
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||| |||||||||| ||||||||||| ||||||| || ||||||| ||||| |||||||||||| ||||||  |||||||||||||    
T  30717516 gtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgt 30717606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 37559036 - 37558954
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||||||||||| ||||| | || ||||||| ||||  |||||||||||||||||||||||||||||||||| |||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 37558954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 37419816 - 37419727
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    |||||||||||||||||||||| |||||||| ||||||| || | ||||| ||||| |||||||| ||  ||||||||||||||||||||    
T  37419816 gtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 18422022 - 18421946
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || |||||||  ||||||||||||||  |||||||||||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgt 18421946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 19536397 - 19536474
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || ||||||| |||||| |||||||||| ||||||||||||||| |||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgt 19536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 38117159 - 38117232
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||| ||||||||| ||||||  || ||||||| ||||| |||||||||||||||||||||||||||||||    
T  38117159 cgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 11223849 - 11223937
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||| ||| |||||||||||||||| ||||||| || ||||| | ||||| ||| ||||||||||||| ||||||| ||||||    
T  11223849 gtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtcc 11223937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 30404850 - 30404926
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||| |||||||||||| ||||||| || ||||||| ||||| ||||||||| | ||||||||||||||||||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgt 30404926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 15657937 - 15657847
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||| | |||||||||||||| ||||| ||||||| || ||||||| ||||  |||||||||| || |||||||||| |||||||||    
T  15657937 gtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgt 15657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 21374706 - 21374780
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccg 179  Q
    |||||||||| ||||||| || ||||| | ||||| |||||||||||||||||||||||| ||||||||| ||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccg 21374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 21624326 - 21624252
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaa-ttattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| ||||||| || ||||  | ||||||||| ||||||||||||||||||||||||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtc 21624252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 23058433 - 23058519
Alignment:
Q  89 acaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||||||||| |||||||  | ||||||| |||||| |||||||||  ||||| ||||||||| |||||||    
T  23058433 acaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgt 23058519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 34784968 - 34785058
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| ||||||||||||||||||| | || |||||||||| ||||||| ||| | |||  ||||| |||||||| ||||||||||||||    
T  34784968 gtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgt 34785058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 2438719 - 2438793
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| ||||||||||||||||| ||  ||||||||||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagc--gtcagtgtccgt 2438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 12668416 - 12668493
Alignment:
Q  91 accgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    ||||||||||||||||||||| || ||||||| || ||||| | ||||| |||||||||| | |||||||||||||||    
T  12668416 accgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 18841014 - 18841087
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||||||||| ||||||| || ||||| | ||||| |||||||||| |||||| ||||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtcc 18841087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 20473381 - 20473308
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||| ||||||||||| ||||||| || ||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtc 20473308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 33153488 - 33153415
Alignment:
Q  93 cgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtca 166  Q
    ||||||||||| |||||||||| ||||||| || ||||||| |||||||||| ||||| ||| |||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgtca 33153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 15972932 - 15972856
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || | ||| | ||||| |||||||||  |||||||||||||||||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgt 15972856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 30335476 - 30335400
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| ||||| |||||||||| ||||| | ||||| |||||||||| ||||||||||||  |||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgt 30335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 21091781 - 21091706
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||| |||||||||| ||||||| || ||||| | ||| ||||||||||||| ||||||| ||||||||||||||    
T  21091781 gacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 26769584 - 26769497
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||| ||||||| |||||||||||||||| |||||| | |  ||||||  |||| |||||||||| |||||||||||||| |||||    
T  26769584 gtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtc 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 34337167 - 34337252
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||| |||||||||||||||| |||     || ||||||| ||||| ||||||| | |||||||||||||||| |||||||    
T  34337167 gtccgacaccgacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgt 34337252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 23718082 - 23718009
Alignment:
Q  101 caccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| | || ||||||| || ||||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgt 23718009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 24105754 - 24105681
Alignment:
Q  101 caccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| | || ||||||| || ||||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgt 24105681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 36756341 - 36756417
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| || ||||||| || ||||| | || || |||||||||| ||||||| ||||||||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtc 36756417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 18255980 - 18256039
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    |||||||||||||| || ||||| |||| ||||||| ||||||||||||||| |||||||    
T  18255980 cgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtc 18256039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 16069272 - 16069330
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| || ||| ||| ||||||||||||||| | ||||||||||||||||||||||    
T  16069272 ttacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgt 16069330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 31018649 - 31018575
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||||| | || ||||||||||  |||||| ||| | ||||||||||| |||| |||||||||||||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtcc 31018575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 27460048 - 27460011
Alignment:
Q  135 ttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  27460048 tttttcaaattattagctgtgtcggcgtgtcagtgtcc 27460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 4882686 - 4882766
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    ||||||||||||||| ||||||||||| ||||||| || ||| | | ||||| |||| |||||| || ||| |||||||||    
T  4882686 gacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagt 4882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 27084278 - 27084230
Alignment:
Q  141 aaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  27084278 aaattattagcagtgtcggagtgtccgtgtccgtatccgtgcttcatag 27084230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 42832277 - 42832357
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccg 179  Q
    ||||||||||||| || ||||||| |||||||| | ||| | ||||||||||| ||||||| ||||| | |||||| ||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctgagtccgtgtccg 42832357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 974809 - 974746
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcg 158  Q
    |||||||||||||||||||| ||||||| ||  ||||||  |||| |||||||||| |||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 31808118 - 31808063
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||| |||||||||||    
T  31808118 ttacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 37986820 - 37986765
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||| |||||| | | ||||| ||||||||| |||||||||||||||||||||    
T  37986820 ttacactcaaatatatcattttttcaaattattatctgtgtcggcgtgtcagtgtc 37986765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 39323316 - 39323241
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    |||||||||| ||||||| || ||||| | ||| | ||||||||||| |||||| ||| ||||||||||| |||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtccgt 39323241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 12940941 - 12941011
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||| ||||| ||||||| || ||| ||| ||||| |||||||||| ||||||  |||||||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgt 12941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 20242727 - 20242801
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||||| | || ||||||| || ||||||| ||| | |||  ||||| |||||||||||||||||||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtcc 20242801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 21616803 - 21616745
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| || ||||||| ||| | ||||||||||| ||||||||||||| ||||||||    
T  21616803 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgt 21616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 21782836 - 21782890
Alignment:
Q  116 ttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||| || ||||||| ||| | ||||||||||| ||||||||||||||||||    
T  21782836 ttacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 24009307 - 24009258
Alignment:
Q  146 attagctgtgtcggcgtgtcagtgtccgtatccgttcttcatagatggtac 196  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||| ||||    
T  24009307 attagctgtgtcgccgtgtc-gtgtccgtatccgtgcttcatagattgtac 24009258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 34221534 - 34221588
Alignment:
Q  135 ttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    ||||| |||||||||||||||||||| | ||||| ||||| ||||| ||||||||    
T  34221534 tttttcaaattattagctgtgtcggcatatcagtatccgtgtccgtgcttcatag 34221588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 34994019 - 34994069
Alignment:
Q  141 aaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatagat 191  Q
    ||||||||||| |||| ||||| ||||||||||| ||||| ||||||||||    
T  34994019 aaattattagcggtgttggcgtatcagtgtccgtgtccgtgcttcatagat 34994069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 5040793 - 5040729
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggc 160  Q
    ||||||||||||||||| ||||| | || ||||||| ||||||  |||||||||||||| |||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgtatcggc 5040729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 27286278 - 27286371
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||| ||||| ||||  ||||| | || ||||||| || |||||||  || | |||||||||||  ||||||||| ||||||||||||||    
T  27286278 gtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgtatc 27286371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 18420420 - 18420504
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagt 168  Q
    ||||||||  ||||| |||||||||||| || || || | || ||||||| ||| | ||||||||||| |||| |||||||||||    
T  18420420 gtccgacatggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 30299008 - 30298923
Alignment:
Q  96 cacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||||||||||||| ||||||| || ||||| | |||||| |||||||||||||||||||||||||||||||||| |||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 30298923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 30327876 - 30327791
Alignment:
Q  96 cacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||||||||||||| ||||||| || ||||| | |||||| |||||||||||||||||||||||||||||||||| |||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 30327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 4383436 - 4383338
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcat 187  Q
    |||||||||||||||| |||| ||||| ||||||| || ||||||| ||||| |||||||||| ||| ||| ||||||||||||||||||||| ||||||    
T  4383436 gacaccgacacgacactgacatttgtaattacactgaattatgtga-tttttcaaattattagttgtatcgacgtgtcagtgtccgtatccgtgcttcat 4383338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 22234880 - 22234982
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttca 186  Q
    |||||||||||||||||||||| |  | ||||||| || ||||||| |||||| ||||| ||||| ||||||||||||| |||||||||||||| |||||    
T  22234880 gacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgtatccgtgcttca 22234979  T
Q  187 tag 189  Q
    |||    
T  22234980 tag 22234982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 23292986 - 23293062
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||| ||| || ||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 23293062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 11651142 - 11651213
Alignment:
Q  106 acacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||||||| || |||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatc 11651213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 16303263 - 16303345
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||||||||||||||| |||||||||| ||| | | ||||| ||| ||||| || ||||||||||||||||||||||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatc 16303345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 21945562 - 21945489
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||||||||| ||||||| || ||||| | ||||| |||||||||||||||||||| ||||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtc 21945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 27706174 - 27706251
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||  ||||||||| |||||||||| ||||||| |||||||||||||||  ||||||| |||||||||||||    
T  27706174 acacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtcc 27706251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 12895110 - 12895197
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||||||||||||||||| ||||  | || ||||||| ||||| |||||||||||||| |||||||||| |||||||| |||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtccgt 12895197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 19482734 - 19482654
Alignment:
Q  91 accgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||| ||||||||| ||||||  || |||||||  |||| |||||||||| ||||||||||||||||||||    
T  19482734 accgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 19482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 49431085 - 49431009
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    |||||||||||||| || ||||||| || ||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccg 49431009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 3947760 - 3947839
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||| |||||||||| ||||||| || |||| || ||||| |||||||||||||||||||| |||| |||||    
T  3947760 ccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtc 3947839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 35157986 - 35158061
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||| || |||||||||| ||||||| ||||  |||||||||| || ||||||||||||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgt 35158061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 28084589 - 28084511
Alignment:
Q  90 caccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcag 167  Q
    |||||||||||||| |||||||||| ||||| | || ||||||| |||||| ||||| |||||||||||||||||||||    
T  28084589 caccgacacgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcag 28084511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 50280955 - 50280867
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacac--taaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||| |||||||||||| |||||||| ||||||  | || ||||||| ||||| ||||||||||||||||||||||||| |||||    
T  50280955 gtccgacac-gacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtccgtgtc 50280867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 2361975 - 2362048
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||| || |||||||||| ||||| | ||||| ||||||||||||||||||| |||||| ||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtc 2362048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 11596348 - 11596425
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||||| ||||||||| ||||||| || ||||||| ||||| |||||||||||| ||| ||||| ||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 12797338 - 12797413
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || ||||||| ||||| |||||||||| | || ||||||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgt 12797413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 29205501 - 29205406
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcgg----cgtgtcagtgtccgtatccgttcttcatagat 191  Q
    ||||||||||||||| ||||||| || ||||||| ||||| ||||||||||| |||| ||    ||||||  ||||||||||||| ||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttggtgtccgtgtccatgtccgtatccgtgcttcatagat 29205406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 34306804 - 34306881
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtat 176  Q
    ||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||| ||||||||||| |||||||| ||||    
T  34306804 cgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtctgtat 34306881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 51701328 - 51701258
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    |||||||||||||||||  ||||||||| ||||||| || ||||| | ||||| |||||||||||||||||    
T  51701328 cgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 24613691 - 24613768
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||||||| |||||||||||||||| ||||| | || ||||||| ||| | |||||||||| ||||||| ||||||    
T  24613691 gacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 42640588 - 42640513
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgactttttt---aaattattagctgtgtcggcgtgtcagtgt 170  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||   ||||||| ||||||||||||||||| ||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgtccgtgt 42640513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 12895274 - 12895342
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtca 166  Q
    |||||||||||||| || |||||| ||| ||||||| ||||| |||||||||  |||||||||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 30982868 - 30982951
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||||||||||| || ||||||| |||||||||| ||| | |||| |||||| ||   |||||||| ||||||||    
T  30982868 gacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgt 30982951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 6485613 - 6485692
Alignment:
Q  100 acaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccg 179  Q
    ||||||||||||||| |||||||||| ||||||| ||||| |||||||||  | |||| ||||||  |||||||| ||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattttgtctgcgtgtaggtgtccgtgtccg 6485692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 28964248 - 28964338
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatag 189  Q
    |||||| |||||||||| ||||||| || ||||||| ||||| |||||||||||| ||||   ||  |||||||||||||||| ||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcaatgt-ccagtgtccgtatccgtgcttcatag 28964338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 715608 - 715674
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgactttt-ttaaattattagctgtgtcggcgtgt 164  Q
    |||||| ||||||||| ||||||| || ||||||| |||| ||||||||||||||||||||| ||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 715674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 752934 - 753000
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgactttt-ttaaattattagctgtgtcggcgtgt 164  Q
    |||||| ||||||||| ||||||| || ||||||| |||| ||||||||||||||||||||| ||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 753000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 13134514 - 13134444
Alignment:
Q  93 cgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtg 163  Q
    |||||||||| |||||| | || |||||||||| ||||||| ||| ||||||||| ||| |||||||||||    
T  13134514 cgacacgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 30838283 - 30838193
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||||||||| |||| || |||||||||| ||| | | ||| | ||||||||||| || ||| ||| |||||||||||    
T  30838283 gtccgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgt 30838193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 31800477 - 31800550
Alignment:
Q  97 acgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||| ||||||||||||| ||||| |||| ||| | | ||||| ||||||||||||||||||| ||||| ||||    
T  31800477 acgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgt 31800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 40481687 - 40481623
Alignment:
Q  106 acacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||| ||||||| || ||||||| ||||| |||||||||| ||| ||||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 12708220 - 12708132
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaa-ttattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||  ||||||||| ||||||||||| ||||||| || ||| | | ||||| ||| ||||||| |||||| |||||||||||||    
T  12708220 gtccgacatagacacgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtc 12708132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 14126096 - 14126184
Alignment:
Q  84 gtccgacaccgacacgacacc-gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||| ||||||| ||  ||||||| || ||||||| || ||||||||||| | ||||||||| | |||||||||||| ||||||    
T  14126096 gtccgacacggacacgagacatgacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtc 14126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 19500844 - 19500919
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtg--acttttttaaattattagctgtgtc 157  Q
    |||||||||||||||||||||  ||| | || |||||||||||||||||    ||||||||||||||| |||||||    
T  19500844 gtccgacaccgacacgacaccatcacatataattacactaaaatatgtgttttttttttaaattattaactgtgtc 19500919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 24544003 - 24543967
Alignment:
Q  135 ttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24544003 ttttttaaattattagttgtgtcggcgtgtcagtgtc 24543967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 54580023 - 54580087
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgt 162  Q
    |||||||||||||| || ||||||| || ||||||| ||||| |||||||||| |||||| ||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 848024 - 847937
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| ||| |||||||||||||||| ||| | | || ||||| | ||| | ||||||||||| |  ||||||||||||||||    
T  848024 gtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtc 847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 4157208 - 4157150
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtc 157  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| |||||||||| ||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtga-tttttcaaattattagttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 11931346 - 11931263
Alignment:
Q  91 accgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||| |||| |||||| | ||||||||||||| ||||||| ||||| | ||||||| | |||||||| || || |||||||    
T  11931346 accgacatgacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatggcattgtccgt 11931263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 20633535 - 20633465
Alignment:
Q  104 cgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    ||||||||||| ||||| | || |||||   ||||| ||||||||||| |||||| ||||||||||||||||||    
T  20633535 cgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatc 20633465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 38847012 - 38847079
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    |||||| |||||||||| ||||||| ||  || ||| ||||| ||||||||||||||||||| |||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgtc 38847079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 46083977 - 46084083
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttct 183  Q
    |||||| || |||||||||||||||| | || |||||||| | ||||||| ||  | |||  |||||||||||| | ||||| |||||||||||| | ||    
T  46083977 gtccgatactgacacgacaccgacacatataattacactagattatgtgatttactaaaacaattagctgtgtccg-gtgtccgtgtccgtatccatgct 46084075  T
Q  184 tcatagat 191  Q
    ||||||||    
T  46084076 tcatagat 46084083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 5414158 - 5414248
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||||||||| || | || |||||||  | | ||||| ||| | |||  |||||||||||||||||||| ||||||||    
T  5414158 gtccgacactgacacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgt 5414248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 16073453 - 16073380
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    ||||||||||||||||| ||||||| || |||| || ||||| |||||||||  ||||| |||||||||| ||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgttggcgtgtcagagtcc 16073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 15029824 - 15029751
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||| |||| | || ||||||| || |||||||  |||| ||||||||||| ||||| |||||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 19312407 - 19312329
Alignment:
Q  85 tccgacaccgacacgacaccgacacttgtatttacactaaaatatgtga----cttttttaaattattagctgtgtcgg 159  Q
    ||||||| |||||||||||||| |||| || ||||||| ||  ||||||     |||||||||||||||||||||||||    
T  19312407 tccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttttttttttaaattattagctgtgtcgg 19312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 35723373 - 35723458
Alignment:
Q  87 cgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||| ||||||| ||||| | || ||||| | || ||||||  |||| | ||||||||||| |||||||||||||||||||    
T  35723373 cgacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 8857 - 8781
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||||||  || ||| ||||| ||||||||||||||||||||||||||||||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 8781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 92859 - 92772
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttcttcatagatg 192  Q
    |||||||||| ||||||| || ||||| | ||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtgcttcatagatg 92772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 123686 - 123612
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgact---tttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||||||| ||||||| || ||||||| |   ||||||||||||||||||||| |||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 51862 - 51788
Alignment:
Q  106 acacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||| ||||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 51788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 71798 - 71709
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgactttttt--aaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||||||||| |||||| ||| ||||||| || | ||||| ||||||  |||||||||||||||||||||||||||||||    
T  71798 gtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 23485 - 23406
Alignment:
Q  92 ccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||||||||| || ||||||| || ||||||| |||||| | |||||| |||||||||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtc 23406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 23584 - 23497
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtga-cttttttaaattattagctgtgtcggcgtgtcagtgt 170  Q
    |||||||||||| ||||||| ||||||| || ||||||| || |||||||  |||||||| |||||| ||||||||| ||||||||||    
T  23584 gtccgacaccgaaacgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgt 23497  T

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Target: scaffold0136 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 3835 - 3922
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||| ||||||||| |||||||||| ||||||| || ||||||| ||||||||||||||| | |||||||| | ||||||||    
T  3835 gtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtc 3922  T

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Target: scaffold0652 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 462 - 538
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||||||||| ||||||| || | ||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgt 538  T

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Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 46741 - 46665
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||||| ||||| ||||||| || ||||||| ||||| ||||||||| |||||||||||||||| |||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgt 46665  T

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Target: scaffold0450 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 8621 - 8728
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatccgttct 183  Q
    |||||| |||||||||||||||||| ||||| ||| ||  || |||||||  |||| |||||||||| ||||||||| ||||||||| ||||| ||| ||    
T  8621 gtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcggcatgtcagtgttcgtattcgtgct 8720  T
Q  184 tcatagat 191  Q
    || |||||    
T  8721 tcgtagat 8728  T

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Target: scaffold0722 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 7032 - 7110
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtat 176  Q
    ||||||| ||||||||| ||| |||||| ||||| | ||||| |||||||||||||||||| ||| |||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgtat 7110  T

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Target: scaffold0361 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 14580 - 14498
Alignment:
Q  107 cacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgt-cagtgtccgtatccgttcttcata 188  Q
    |||||||| ||||||| || ||||||| ||||| |||||||||| ||||||||||||| | |||||||||||||| |||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccggtgtccgtatccgtgcttcata 14498  T

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Target: scaffold0086 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 2994 - 2900
Alignment:
Q  91 accgacacgacaccgacacttgtatttacactaaaatatgtgactttttt-----aaattattagctgtgtcggcgtgtcagtgtccgtatccgt 180  Q
    ||||||||||||| || ||||||| |||||||||| ||||||| ||||||     |||||||||||| |||  ||||||||||||||||||||||    
T  2994 accgacacgacactgatacttgtaattacactaaattatgtgattttttttcttcaaattattagctatgttagcgtgtcagtgtccgtatccgt 2900  T

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Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 178813 - 178895
Alignment:
Q  93 cgacacgacaccgacacttgtatttacactaaaatatg-tgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||| ||||| |||||||||| ||||||| || |||| ||| ||||| |||||||||| |||||||||||||||||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 178895  T

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Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 192256 - 192328
Alignment:
Q  105 gacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgtatc 177  Q
    |||||||||| ||||||  || ||||| | ||| | ||||||||| | |||||||||||||||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatc 192328  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 17750 - 17824
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    |||||||||||||||| |||||||||| ||||||| ||||| |||||||||| |||||| |||||| | ||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccg 17824  T

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Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 13459 - 13383
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| |||||| || |||| || ||||||| ||| | |||||||||| |||||||||||||||||||||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 13383  T

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Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 21868 - 21944
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||| |||||| || |||| || ||||||| ||| | |||||||||| |||||||||||||||||||||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 21944  T

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Target: scaffold0044 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 53253 - 53170
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcag 167  Q
    |||||||||||||||| ||||||||||| || ||||||| || ||||||| ||| | |||||||| || || ||||||||||||    
T  53253 gtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

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Target: scaffold0025 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 23832 - 23753
Alignment:
Q  95 acacgacaccgacacttgtatttacactaaaatatgtgactttttt-aaattattagctgtgtcggcgtgtcagtgtccg 173  Q
    |||||||||||||||||||| ||||||| || ||||||| |||||| ||||||||| ||||| | | |||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccg 23753  T

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Target: scaffold0227 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 7319 - 7405
Alignment:
Q  106 acacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgt-cagtgtccgtatccgttcttcatagat 191  Q
    |||||| || |||||||||| ||||||| ||||  |||||||||| ||||||||||||| | ||||| |||||||| ||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccggtgtctgtatccgtgcttcatagat 7405  T

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Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 130538 - 130465
Alignment:
Q  101 caccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||| ||||||| || ||||||| ||||| ||| ||||| |||||||||| ||||| |||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgt 130465  T

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Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 24097 - 24018
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgt 164  Q
    |||||||||||||||||||| || ||| ||| |||||||||| |||| || ||||  ||||||||||||||||||| ||||    
T  24097 gtccgacaccgacacgacactgaaact-gtaattacactaaattatgagatttttgaaaattattagctgtgtcggtgtgt 24018  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 4884 - 4950
Alignment:
Q  99 gacaccgacacttgtatttacactaaaatatgtgactttt-ttaaattattagctgtgtcggcgtgt 164  Q
    |||||| ||||||||| ||||||| || ||||||| |||| ||||||||||||||||||||| ||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 4950  T

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Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 8729 - 8651
Alignment:
Q  94 gacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtcc 172  Q
    |||||||||||||||||| || ||| ||| || ||||||| |||  |||||||||||  |||||| |||||||||||||    
T  8729 gacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtcc 8651  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 263362 - 263448
Alignment:
Q  88 gacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||||||||||||| ||||||| || ||||||| || ||||||  ||| | ||||||||||| |||| | | |||||||||||||    
T  263362 gacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgt 263448  T

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Target: scaffold0246 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 19626 - 19562
Alignment:
Q  106 acacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    ||||||||| ||||||| || ||||||| ||||| |||||||||| ||| ||||||||||||||||    
T  19626 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 19562  T

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Target: scaffold1528 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 1108 - 1025
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcag 167  Q
    |||| |||||||||| |||| ||||| | || ||||||| || ||||| | ||||| ||||||||||| ||||||| |||||||    
T  1108 gtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcag 1025  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 33375 - 33430
Alignment:
Q  110 ttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtc 165  Q
    ||||| ||||||| || ||||| | ||||| |||||||||||||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 19217 - 19128
Alignment:
Q  84 gtccgacaccgacacgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    |||||| || ||||||||||||||| || || | ||||| || ||||| | ||||||||||||||| |  ||||||||||| |||||||||    
T  19217 gtccgatactgacacgacaccgacatttttaatcacactgaattatgtca-ttttttaaattattaaccatgtcggcgtgttagtgtccgt 19128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 70337 - 70264
Alignment:
Q  98 cgacaccgacacttgtatttacactaaaatatgtgacttttttaaattattagctgtgtcggcgtgtcagtgtc 171  Q
    |||||||||||||| || ||||||| || ||||| | ||||| ||||||||| |||||||| | |||| |||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtc 70264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 225311 - 225344
Alignment:
Q  141 aaattattagctgtgtcggcgtgtcagtgtccgt 174  Q
    ||||||||| ||||||||||||||||||||||||    
T  225311 aaattattatctgtgtcggcgtgtcagtgtccgt 225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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