View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6965_low_26 (Length: 249)
Name: NF6965_low_26
Description: NF6965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6965_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 27906439 - 27906197
Alignment:
| Q |
1 |
ccgtgtagctatcgccccagcaccccaagacgcccaccacaacaaatagacgggcctaacacgtgtttgggtcaaacgcaagagcaggggcaaagggtgc |
100 |
Q |
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| T |
27906439 |
ccgtgtagctatcgccccagcaccccaagacgcccaccacaacaaatagacgggcctaacacgtgtttgggtcaaacgcaagagcaggggcaaagggtgc |
27906340 |
T |
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| Q |
101 |
ttcaccagcttagcttcctgccccatgctcctattttgtgtccatatatgagtcatactgaacaatatccgccttggcgaatatcaaacttctatgaaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27906339 |
ttcaccagcttagcttcctgccccatgctcctattttgtgtccatatatgagtcatactgaacaatatccgccttggcgaatatcaaacttctatgaaga |
27906240 |
T |
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| Q |
201 |
tttcttgcttgacgctcacataatggcaacaccttcttctcac |
243 |
Q |
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||||||||||||||||||||| |||||||||||||| |||||| |
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| T |
27906239 |
tttcttgcttgacgctcacatcatggcaacaccttcatctcac |
27906197 |
T |
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