View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6966_high_13 (Length: 234)
Name: NF6966_high_13
Description: NF6966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6966_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 41105647 - 41105869
Alignment:
| Q |
1 |
ctttacctttgacataattctttgtcatgtactgtccatttgcaatattgcatttaatttgttagttgaaacattggcaatatacattcaattccatatt |
100 |
Q |
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| T |
41105647 |
ctttaccgttgacataattctttgtcatgtactgtccatttgcaatattgcatttaatttgttagttgaaacattggcaatatacattcaattccatatt |
41105746 |
T |
|
| Q |
101 |
tttaaattattgtatgatcagaatctcatctggcaaaccttgataattgaaaggtaccaagacttttttaaaggttttacagtcagcatactacaatagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41105747 |
tttaaattattgtatgatcagaatctcatctggcaaaccttgataattgaaaggtaccaagacttttttaaaggttttacagtcagcatactacaatagg |
41105846 |
T |
|
| Q |
201 |
agtatatattttatacgtgtgtg |
223 |
Q |
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|||||||||||||||| |||||| |
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| T |
41105847 |
agtatatattttatacatgtgtg |
41105869 |
T |
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