View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6966_high_14 (Length: 229)
Name: NF6966_high_14
Description: NF6966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6966_high_14 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 41105283 - 41105506
Alignment:
| Q |
6 |
aattttttctcgccaccatcttcggatccaaacatgttcaacaacttccttcatgatttaagtcctgcacttcatagtggtagaaattttatggaaggtg |
105 |
Q |
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| T |
41105283 |
aattttttctcgccaccatcttcggatccaaacatgttcaacaacttccttcatgatttaagtcctgcacttcatagtggtagaaattttatggaaggtg |
41105382 |
T |
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| Q |
106 |
gtgctaatttcttattacctagtccttcaaattttgtttcacctattactccttctattgatttattcaactatttcttagggtaataaatggttgccat |
205 |
Q |
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| T |
41105383 |
gtgctaatttcttattacctagtccttcaaattttgtttcacctattactccttctattgatttattcaactatttcttagggtaataaatggttgccat |
41105482 |
T |
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| Q |
206 |
ttatttgtagctaagtttgattat |
229 |
Q |
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|||||||||||||||||||||||| |
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| T |
41105483 |
ttatttgtagctaagtttgattat |
41105506 |
T |
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