View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6966_low_11 (Length: 362)

Name: NF6966_low_11
Description: NF6966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6966_low_11
NF6966_low_11
[»] chr6 (42 HSPs)
chr6 (12-321)||(26637323-26637629)
chr6 (12-321)||(26743289-26743595)
chr6 (12-240)||(26885907-26886135)
chr6 (18-244)||(26863427-26863653)
chr6 (13-158)||(25075787-25075932)
chr6 (15-244)||(26813327-26813556)
chr6 (117-303)||(25491522-25491709)
chr6 (60-239)||(27602870-27603049)
chr6 (112-293)||(26960853-26961037)
chr6 (12-251)||(26648259-26648498)
chr6 (172-306)||(27663475-27663615)
chr6 (12-239)||(26754239-26754466)
chr6 (12-234)||(26657815-26658037)
chr6 (12-234)||(26763786-26764008)
chr6 (12-293)||(26825596-26825881)
chr6 (15-278)||(26625023-26625286)
chr6 (15-278)||(26731000-26731263)
chr6 (12-293)||(31286334-31286618)
chr6 (60-234)||(27216298-27216472)
chr6 (117-267)||(26850468-26850618)
chr6 (39-224)||(26938890-26939075)
chr6 (192-276)||(26979184-26979270)
chr6 (12-304)||(26804235-26804532)
chr6 (192-276)||(26951546-26951631)
chr6 (120-275)||(27696814-27696967)
chr6 (112-275)||(27716716-27716877)
chr6 (121-271)||(27425835-27425989)
chr6 (112-275)||(27609337-27609498)
chr6 (112-275)||(27680766-27680927)
chr6 (53-226)||(28788089-28788262)
chr6 (53-226)||(28794210-28794383)
chr6 (300-361)||(27663645-27663704)
chr6 (188-239)||(27704537-27704588)
chr6 (131-239)||(27591246-27591354)
chr6 (131-239)||(27675843-27675951)
chr6 (313-360)||(26657656-26657703)
chr6 (313-360)||(26763627-26763674)
chr6 (302-360)||(26885764-26885822)
chr6 (300-362)||(27426052-27426113)
chr6 (325-362)||(26825509-26825546)
chr6 (310-362)||(26813233-26813285)
chr6 (120-244)||(27529513-27529637)
[»] chr1 (6 HSPs)
chr1 (15-234)||(28125801-28126020)
chr1 (112-275)||(266572-266734)
chr1 (116-234)||(28131721-28131839)
chr1 (15-113)||(28130839-28130937)
chr1 (300-360)||(28126124-28126184)
chr1 (300-360)||(28131936-28131996)
[»] chr4 (9 HSPs)
chr4 (117-303)||(18697687-18697875)
chr4 (117-303)||(18722359-18722545)
chr4 (53-303)||(18729717-18729970)
chr4 (117-303)||(18653763-18653952)
chr4 (117-303)||(18687899-18688089)
chr4 (117-303)||(18677845-18678032)
chr4 (55-166)||(5089213-5089324)
chr4 (121-271)||(18075566-18075720)
chr4 (300-362)||(18075442-18075503)
[»] chr2 (1 HSPs)
chr2 (18-286)||(17991334-17991597)
[»] scaffold0003 (2 HSPs)
scaffold0003 (121-271)||(61374-61528)
scaffold0003 (300-362)||(61250-61311)
[»] scaffold0277 (2 HSPs)
scaffold0277 (53-226)||(11841-12014)
scaffold0277 (53-226)||(2878-3051)
[»] scaffold1870 (1 HSPs)
scaffold1870 (53-226)||(616-789)
[»] scaffold0419 (1 HSPs)
scaffold0419 (53-226)||(9335-9508)
[»] chr8 (1 HSPs)
chr8 (195-232)||(29272138-29272175)


Alignment Details
Target: chr6 (Bit Score: 283; Significance: 1e-158; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 12 - 321
Target Start/End: Complemental strand, 26637629 - 26637323
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26637629 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 26637530  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26637529 atgacaagtgttttgaga-ttgtcatcttcttaaaggcctctccattccactctattacaggttcctctgagggacaattcagatatatcatttgaattt 26637431  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaaagagcaaa 311  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26637430 tactagttcccttttaacaaaa--aaaataaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattaagtgtaaaaagagcaaa 26637333  T
Q  312 gtcatggtca 321  Q
    ||||||||||    
T  26637332 gtcatggtca 26637323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 12 - 321
Target Start/End: Complemental strand, 26743595 - 26743289
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26743595 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 26743496  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26743495 atgacaagtgttttgaga-ttgtcatcttcttaaaggcctctccattccactctattacaggttcctctgagggacaattcagatatatcatttgaattt 26743397  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaaagagcaaa 311  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26743396 tactagttcccttttaacaaaa--aaaataaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattaagtgtaaaaagagcaaa 26743299  T
Q  312 gtcatggtca 321  Q
    ||||||||||    
T  26743298 gtcatggtca 26743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 26886135 - 26885907
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    ||||||||||||||||||||   ||| | ||| || |||| | |||||||||||| || |||||| |||| | |||| ||||||||| || ||| |||      
T  26886135 aatactagatgatagagactctgaagtacatcctttccatttaaatactctcaaactatttggaagatacttcggacctttggaaaaatggccattttca 26886036  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||| |||||||| |||||||||||||| |||| || |||||| || |||||||| |||||| ||| |||||| |||||||||||||||| ||| |    
T  26886035 atgataagagttttgagttttgtcatcttcttgaaggactttccattacagtctattacgggttccattgcgggacagttcagatatatcatttcaatgt 26885936  T
Q  212 tactagttcccttttaacaaaaataaaat 240  Q
    | ||||||||||||||||||||| |||||    
T  26885935 tgctagttcccttttaacaaaaaaaaaat 26885907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 26863653 - 26863427
Alignment:
Q  18 agatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgaca 117  Q
    |||||||||||||||  ||| ||||| || |||| | ||||||||||||  ||||| ||  ||  | |||| ||| ||||| || ||| |||  ||||||    
T  26863653 agatgatagagacttggaaggatatcctttccattttaatactctcaaacaacttgaaaggtatttgggacctttagaaaaatggccattttcaatgaca 26863554  T
Q  118 agtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactag 217  Q
    ||||||||||| ||| |||||||||| ||||||| ||||||||| |||||||| |||||| |||| ||||||| |||||||| ||||| |||||||||||    
T  26863553 agtgttttgagttttttcatcttcttgaaggcctttccattccagtctattacgggttccgttgaaggacaatgcagatataccatttcaattttactag 26863454  T
Q  218 ttcccttttaacaaaaataaaataaaa 244  Q
    ||||||||| ||||||| |||| ||||    
T  26863453 ttcccttttcacaaaaaaaaaaaaaaa 26863427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 25075932 - 25075787
Alignment:
Q  13 atactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttta 112  Q
    |||||||||||||||||   |||  ||||||||||||||||||||||| ||||||||||||||| |||| |  |||||||||| ||||||| | || |||    
T  25075932 atactagatgatagagagggcaagcaatatctttcccatatcaatactttcaaagtacttggaagatacttcagacttttggagaattgactatttctta 25075833  T
Q  113 tgacaagtgttttgagatttgtcatcttcttaaaggcctctccatt 158  Q
    ||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  25075832 tgataagtgttttgatatttgtcatcttcttgaaggcctctccatt 25075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 26813556 - 26813327
Alignment:
Q  15 actagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatg 114  Q
    ||||||||| | ||||| | ||| |||||| | |||  ||||||||||||||||||| |||| || | | |||| ||| |||||||||||| |||  ||     
T  26813556 actagatgacatagactccgaaggatatctattccacttcaatactctcaaagtactaggaagatgcttgggacctttagaaaattgaccattttcaata 26813457  T
Q  115 acaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttac 214  Q
    | |||||||||||| |||||||||||||| ||||||| ||||||||| |||||  | |  | ||||| |||  |||| ||||||||||||| ||||||||    
T  26813456 ataagtgttttgagttttgtcatcttcttgaaggcctttccattccaatctatctcggaattctttgtggggaaatttagatatatcatttcaattttac 26813357  T
Q  215 tagttcccttttaacaaaaataaaataaaa 244  Q
    |||||||||||||||||||| |||| ||||    
T  26813356 tagttcccttttaacaaaaaaaaaaaaaaa 26813327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 25491522 - 25491709
Alignment:
Q  117 aagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttacta 216  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||| |||||| |   |||| | |||||  |||||| ||||||||||| ||||||||||    
T  25491522 aagtgttttgagttttgtcgtcttcttgaaggcctctccattccagtctatttcgaattccatggaggggaaattcatatatatcatttcaattttacta 25491621  T
Q  217 gttcccttttaacaaaaataaaata-aaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaa 303  Q
    |||||||||||||||||| |||| | |||  ||| ||  ||||||||| ||||| ||||| || |||||||||||||| |||||||||    
T  25491622 gttcccttttaacaaaaaaaaaaaagaaaagaattaaccacaatacaagtaagacatagaaaaaatgtacatgtaattaagtgtaaaa 25491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 27602870 - 27603049
Alignment:
Q  60 tctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctctccattc 159  Q
    ||||||| ||||||||| |||   ||||| | | ||||| |||||| |||  |||| ||||||||||||||||||||||||||| | ||||| |||||||    
T  27602870 tctcaaactacttggaagatagtcaggacctctagaaaactgaccattttcaatgataagtgttttgagatttgtcatcttcttcatggcctttccattc 27602969  T
Q  160 cactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttcccttttaacaaaaataaaa 239  Q
    |||||||||||   |||| ||||||||||||||| || |||||||| ||| || ||||||||||||||| ||||||||||    
T  27602970 cactctattacgttttccattgagggacaattcaaatgtatcatttcaatgttcctagttcccttttaagaaaaataaaa 27603049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 112 - 293
Target Start/End: Complemental strand, 26961037 - 26960853
Alignment:
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||||||||||||||||||||||||||| || |||| | |||||   ||||   | |||| | |||||||| |||||| ||||||||||| |||||    
T  26961037 atgataagtgttttgagatttgtcatcttcttgaatgccttttcattcatgtcta---cgggtttcattgagggagaattcaaatatatcatttcaattt 26960941  T
Q  212 tactagttcccttttaaca-aaaataaaat-aaaattaatcaatgacaatacaaataagatatag----agaacatgtacatgtaatt 293  Q
    ||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||| ||||||    |||||||||||||||||||    
T  26960940 tactagttcccttttaacaaaaaataaaataaaaattaatcaaccacaatacaaataacatatagagctagaacatgtacatgtaatt 26960853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 26648498 - 26648259
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    ||||||||||||||||||||   |  || ||| || |||| |||||||||||||| | ||||||| |||  || ||| ||| ||||| |||||| |||      
T  26648498 aatactagatgatagagactctgataaacatcctttccatttcaatactctcaaactgcttggaagatatttaagacctttagaaaaatgaccattttca 26648399  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| |||||||||||| |||||||||||||| ||||||| ||| |||   |||||||| | |||| | ||| |  |||||| ||||||||||| |||||    
T  26648398 atgataagtgttttgagttttgtcatcttcttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatatatatcatttcaattt 26648299  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatca 251  Q
    |||||||||||||| |||||||| ||||| |||| |||||    
T  26648298 tactagttccctttcaacaaaaaaaaaattaaatcaatca 26648259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 27663475 - 27663615
Alignment:
Q  172 ggttcctttgagggacaattcagatatatcatttgaattttactagttcccttttaac-aaaaataaaa-taaaattaatcaatgacaatacaaataaga 269  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||  | ||||||||||| |    
T  27663475 ggttccattgaggaacaattcagatatatcatttcaattttactagttcccttttaacaaaaaataaaacaaaaattaatcaaccataatacaaataaca 27663574  T
Q  270 tataga----gaacatgtacatgtaattcagtgtaaaaaga 306  Q
    ||||||    |||||||||||||||||| ||||||||||||    
T  27663575 tatagagcttgaacatgtacatgtaattaagtgtaaaaaga 27663615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 239
Target Start/End: Complemental strand, 26754466 - 26754239
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    ||||||||||||||||||||   |  || ||| || |||| |||||||||||||| | ||||||| |||  || ||| ||| ||||| |||||| |||      
T  26754466 aatactagatgatagagactctgataaacatcctttccatttcaatactctcaaactgcttggaagatatttaagacctttagaaaaatgaccattttca 26754367  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| |||||||||||| |||||||||||||| ||||||| ||| |||   |||||||| | |||| | ||| |  |||||| ||||||||||| |||||    
T  26754366 atgataagtgttttgagttttgtcatcttcttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatatatatcatttcaattt 26754267  T
Q  212 tactagttcccttttaacaaaaataaaa 239  Q
    |||||||||||||| |||||||| ||||    
T  26754266 tactagttccctttcaacaaaaaaaaaa 26754239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 26658037 - 26657815
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    ||||| |||||||||||||||| ||| | ||| || |||| |||| | ||||||| ||||||||| ||   | |||| ||| |||||  | ||| |||      
T  26658037 aatacaagatgatagagacttcgaaggacatcctttccatttcaaaaatctcaaactacttggaagatgttttggacctttagaaaaacggccattttca 26657938  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||| ||||||||||||||||||||| | |||| || ||||||||| |||||||  | |||| | ||||||||||||||||||||||||| ||| |    
T  26657937 atgataagagttttgagatttgtcatcttcctgaagggctttccattccagtctattatggtttccatcgagggacaattcagatatatcatttcaatgt 26657838  T
Q  212 tactagttcccttttaacaaaaa 234  Q
    |||| ||||||||||||| ||||    
T  26657837 tactggttcccttttaaccaaaa 26657815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 26764008 - 26763786
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    ||||| |||||||||||||||| ||| | ||| || |||| |||| | ||||||| ||||||||| ||   | |||| ||| |||||  | ||| |||      
T  26764008 aatacaagatgatagagacttcgaaggacatcctttccatttcaaaaatctcaaactacttggaagatgttttggacctttagaaaaacggccattttca 26763909  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||| ||||||||||||||||||||| | |||| || ||||||||| |||||||  | |||| | ||||||||||||||||||||||||| ||| |    
T  26763908 atgataagagttttgagatttgtcatcttcctgaagggctttccattccagtctattatggtttccatcgagggacaattcagatatatcatttcaatgt 26763809  T
Q  212 tactagttcccttttaacaaaaa 234  Q
    |||| ||||||||||||| ||||    
T  26763808 tactggttcccttttaaccaaaa 26763786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 26825881 - 26825596
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    |||||||||||||||||| | | ||| ||| || |||||| |||||||||||||| ||||||| |  |||   |||| ||| ||||| || ||  ||||     
T  26825881 aatactagatgatagagaatccgaaggatacctatcccatttcaatactctcaaactacttgggaggtactctggacctttagaaaaatggcccttttta 26825782  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    || | ||||||||||||||||||||||||| | || |||| ||||||||| |||||||||| || ||| |||||  |||||| ||||| |||||  | ||    
T  26825781 ataataagtgttttgagatttgtcatcttcatgaaagcctttccattccaatctattacagttttcttggaggggaaattcatatatagcatttcgactt 26825682  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatcaat-----gacaatacaaataagatatagagaacatgtacatgtaatt 293  Q
    ||||||||||| ||||| ||||| |||| | | ||||| |||      |||||||||||||||||| ||||| ||| ||||||||||    
T  26825681 tactagttccc-tttaaaaaaaaaaaaaaagagttaatgaatttaaccacaatacaaataagatatggagaaaatgcacatgtaatt 26825596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 26625286 - 26625023
Alignment:
Q  15 actagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatg 114  Q
    ||||| ||||||||||| | |  || ||| || |||| |||||||||||||| | ||||||| |||| |  ||| ||| |||||  |||||  ||  |||    
T  26625286 actagctgatagagactccgataaacatcctttccatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaccgaccatcttcaatg 26625187  T
Q  115 acaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttac 214  Q
    | |||||||||||| |||||||||||| | ||||||| ||| |||   |||||||| | |||| | |||||| |||||| ||||||||||| ||||||||    
T  26625186 ataagtgttttgagttttgtcatcttcctgaaggcctttcctttctggtctattacggattccatagagggaaaattcatatatatcatttcaattttac 26625087  T
Q  215 tagttccc-ttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatatagagaa 278  Q
    |||||||| |||||||||||| | || || || ||||||  |||||| |||||||||||||||||    
T  26625086 tagttccctttttaacaaaaa-agaaaaacatgaatcaaccacaataaaaataagatatagagaa 26625023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 26731263 - 26731000
Alignment:
Q  15 actagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatg 114  Q
    ||||| ||||||||||| | |  || ||| || |||| |||||||||||||| | ||||||| |||| |  ||| ||| |||||  |||||  ||  |||    
T  26731263 actagctgatagagactccgataaacatcctttccatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaccgaccatcttcaatg 26731164  T
Q  115 acaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttac 214  Q
    | |||||||||||| |||||||||||| | ||||||| ||| |||   |||||||| | |||| | |||||| |||||| ||||||||||| ||||||||    
T  26731163 ataagtgttttgagttttgtcatcttcctgaaggcctttcctttctggtctattacggattccatagagggaaaattcatatatatcatttcaattttac 26731064  T
Q  215 tagttccc-ttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatatagagaa 278  Q
    |||||||| |||||||||||| | || || || ||||||  |||||| |||||||||||||||||    
T  26731063 tagttccctttttaacaaaaa-agaaaaacatgaatcaaccacaataaaaataagatatagagaa 26731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 31286618 - 31286334
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    |||||||||||||||||||| |||  || ||| || |||| |||||||||||||| |  |||||| |||| |  | |  |||||||| || ||| |||      
T  31286618 aatactagatgatagagactccaataaacatcctttccatttcaatactctcaaactgtttggaagatacttgagtccattggaaaaatggccattttca 31286519  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    ||||  |||||||| || |||||||||||||| ||||||  ||| |||   |||||||| | |||| | ||| |  |||||| ||||||||||| |||||    
T  31286518 atgattagtgttttaagttttgtcatcttcttgaaggccattcctttctggtctattacggattccatggagtggaaattcatatatatcatttcaattt 31286419  T
Q  212 tactagttcccttttaacaaaaataaaataaa----attaatcaatgacaatacaaataagatatagagaacatgtacatgtaatt 293  Q
    ||||||||||||||||||||||| |||| |||    || ||||||  |||||| ||||||||||| ||||| || |||||||||||    
T  31286418 tactagttcccttttaacaaaaaaaaaaaaaagaacataaatcaaccacaataaaaataagatatggagaa-atttacatgtaatt 31286334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 27216472 - 27216298
Alignment:
Q  60 tctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctctccattc 159  Q
    ||||||| ||||||||| |||  | |||| ||| ||||| || ||| |||  |||| || ||||||||||||| |||||||| | ||||||| |||| ||    
T  27216472 tctcaaactacttggaagataattgggacctttagaaaaatggccattttcaatgataaatgttttgagatttttcatcttcgtgaaggcctttccactc 27216373  T
Q  160 cactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttcccttttaacaaaaa 234  Q
    |||| |||||||  ||||  ||||||||| |||| ||||||||||| |||||| | |||||||||||||||||||    
T  27216372 cactttattacattttccactgagggacacttcaaatatatcatttcaattttccaagttcccttttaacaaaaa 27216298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 267
Target Start/End: Complemental strand, 26850618 - 26850468
Alignment:
Q  117 aagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggac---aattcagatatatcatttgaatttta 213  Q
    ||||||||||||||||||||||||||| ||||||| | |||||   ||||||||||||||| |||||||||   | ||||||  |||||||| |||||||    
T  26850618 aagtgttttgagatttgtcatcttcttgaaggccttttcattcatgtctattacaggttccgttgagggacgatatttcagaattatcatttcaatttta 26850519  T
Q  214 ctagttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataa 267  Q
    ||| |||||||| ||||||   |||| || |||||||||  |||||||||||||    
T  26850518 ctacttccctttaaacaaa---aaaaaaacattaatcaaccacaatacaaataa 26850468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 224
Target Start/End: Complemental strand, 26939075 - 26938890
Alignment:
Q  39 atatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatc 138  Q
    |||||||| ||||  ||||||||| ||| ||||||||| |||| | |  | ||||||||| ||||||||||| |||| ||||||||| |||||| |||||    
T  26939075 atatctttgccattccaatactcttaaactacttggaaaatacctggagcctttggaaaaatgaccacttttaatgataagtgttttaagatttttcatc 26938976  T
Q  139 ttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttccctt 224  Q
    ||||| |||||||  |||||||| ||| |||    |||  ||||||| | ||||| ||||||||||| ||||||||||||| ||||    
T  26938975 ttcttgaaggccttaccattccaatctcttaggacttcaattgaggggccattcaaatatatcatttcaattttactagtttcctt 26938890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 26979270 - 26979184
Alignment:
Q  192 cagatatatcatttgaattttactagttcccttttaaca-aaaataaaat-aaaattaatcaatgacaatacaaataagatatagag 276  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||| ||||||||    
T  26979270 cagatatatcatttcaattttactagttcccttttaacaaaaaataaaataaaaattaatcaaccacaatacaaataacatatagag 26979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 304
Target Start/End: Complemental strand, 26804532 - 26804235
Alignment:
Q  12 aatactagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccacttttt 111  Q
    |||||||||||||||||||| | |  || ||| || |||| |||||||| ||||| | ||||||| |||| |  ||| ||  ||||| || ||| |||      
T  26804532 aatactagatgatagagactccgataaacatcctttccatttcaatactatcaaactgcttggaagatacttgagaccttcagaaaaatgtccattttca 26804433  T
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||||||| | || ||||||||||| || ||||||| ||| |||   |||||||| | |||| | ||| |  |||||| || |||||||| |||||    
T  26804432 atgataagtgttctcagttttgtcatctttttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatatttatcatttcaattt 26804333  T
Q  212 tactagttcccttttaaca--aaaataaaataaaat----taatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaaa 304  Q
    |||||||||||||||||||  |||| |||| |||||    |||||||| ||||||  |||||||||||||||| || || |||||||| |||| |||||    
T  26804332 tactagttcccttttaacacaaaaaaaaaaaaaaataacataatcaatcacaataacaataagatatagagaa-atttatatgtaattaagtgaaaaaa 26804235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 26951631 - 26951546
Alignment:
Q  192 cagatatatcatttgaattttactagttcccttttaaca-aaaataaaataaaattaatcaatgacaatacaaataagatatagag 276  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||  |||||||||||||  |||||||    
T  26951631 cagatatatcatttcaattttactagttcccttttaacaaaaaataaataaaaattaatcaaccacaatacaaataacttatagag 26951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 120 - 275
Target Start/End: Original strand, 27696814 - 27696967
Alignment:
Q  120 tgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagtt 219  Q
    ||||||||| |||||||||||||| ||||||| ||| |||   ||||| || | |||| | ||| |   ||||| ||||||||||| |||||||||||||    
T  27696814 tgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcatatatatcatttcaattttactagtt 27696913  T
Q  220 cccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatataga 275  Q
    ||||||||||||| |||||  || || ||||||  |||||| ||||||||||||||    
T  27696914 cccttttaacaaagataaa--aacatgaatcaaccacaataaaaataagatataga 27696967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 112 - 275
Target Start/End: Original strand, 27716716 - 27716877
Alignment:
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||||||||| || |||||||||||||| ||||||| ||| |||   ||||| || | |||| | ||| |   ||||| ||||||||||| |||||    
T  27716716 atgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcatatatatcatttcaattt 27716815  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatataga 275  Q
    ||||||||||||||||||||| |||||  || || ||||||  |||||| ||||||||||||||    
T  27716816 tactagttcccttttaacaaagataaa--aacatgaatcaaccacaataaaaataagatataga 27716877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 271
Target Start/End: Original strand, 27425835 - 27425989
Alignment:
Q  121 gttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttc 220  Q
    |||||||| | |||||||||||| ||||||| |||||||   |||||||| | |||| | ||| |  |||||| ||||||||||| ||||||||| ||||    
T  27425835 gttttgaggtgtgtcatcttcttgaaggcctttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttc 27425934  T
Q  221 ccttttaac----aaaaataaaataaaattaatcaatgacaatacaaataagata 271  Q
    |||||||||    ||||| |||| || || ||||||  |||||||||||||||||    
T  27425935 ccttttaacgaaaaaaaaaaaaaaaagatgaatcaaccacaatacaaataagata 27425989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 275
Target Start/End: Original strand, 27609337 - 27609498
Alignment:
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||||||||| || |||||||||||||| ||||||| ||| |||   ||||| || | |||| | ||| |   ||||| ||||||||||| |||||    
T  27609337 atgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcatatatatcatttcaattt 27609436  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatataga 275  Q
    ||||||||||||||||||||| |||||  || || ||||||  |||||| |||||||| |||||    
T  27609437 tactagttcccttttaacaaagataaa--aacatgaatcaaccacaataaaaataagacataga 27609498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 275
Target Start/End: Complemental strand, 27680927 - 27680766
Alignment:
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||| ||||||||| || |||||||||||||| ||||||| ||| |||   ||||| || | |||| | ||| |   ||||| ||||||||||| |||||    
T  27680927 atgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggagattcatatatatcatttcaattt 27680828  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatataga 275  Q
    ||||||||||||||||||||| |||||  || || ||||||  |||||| |||||||| |||||    
T  27680827 tactagttcccttttaacaaagataaa--aacatgaatcaaccacaataaaaataagacataga 27680766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 28788262 - 28788089
Alignment:
Q  53 tcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctc 152  Q
    |||||||||||||| ||||||||| |||  |  ||| ||| ||||| || ||| |||  |||| ||| ||||| |   ||||||||||||| |||||||     
T  28788262 tcaatactctcaaactacttggaagatagttgagacctttagaaaaatggccattttcaatgataagcgttttcaatcttgtcatcttcttgaaggcctt 28788163  T
Q  153 tccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttccctttt 226  Q
    ||| |||   |||||||| | |||||  |||||  |||||| ||||||||||| ||||||||||||||||||||    
T  28788162 tcctttcttgtctattacggattcctcggaggggaaattcatatatatcatttcaattttactagttccctttt 28788089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 28794383 - 28794210
Alignment:
Q  53 tcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctc 152  Q
    |||||||||||||| ||||||||| |||  |  ||| ||| ||||| || ||| |||  |||| ||| ||||| |   ||||||||||||| |||||||     
T  28794383 tcaatactctcaaactacttggaagatagttgagacctttagaaaaatggccattttcaatgataagcgttttcaatcttgtcatcttcttgaaggcctt 28794284  T
Q  153 tccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttccctttt 226  Q
    ||| |||   |||||||| | |||||  |||||  |||||| ||||||||||| ||||||||||||||||||||    
T  28794283 tcctttcttgtctattacggattcctcggaggggaaattcatatatatcatttcaattttactagttccctttt 28794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 27663645 - 27663704
Alignment:
Q  300 aaaaagagcaaagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttact 361  Q
    |||||||| |||||||||||  |||||||||||||||| |||||||| ||||||||||||||    
T  27663645 aaaaagaggaaagtcatggt--aagctaaaataacaaattgttcatagatatcaatcttact 27663704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 27704537 - 27704588
Alignment:
Q  188 aattcagatatatcatttgaattttactagttcccttttaacaaaaataaaa 239  Q
    |||||| ||| |||||||||||||||||||||||||||||  ||||||||||    
T  27704537 aattcatatacatcatttgaattttactagttcccttttataaaaaataaaa 27704588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 27591246 - 27591354
Alignment:
Q  131 ttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttcccttttaaca 230  Q
    |||||||||| || ||||||| ||| |||   |||||||||| |||| | ||| |  |||||| | ||||||||| | |||||| |||||||| ||||||    
T  27591246 ttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaaca 27591345  T
Q  231 aaaataaaa 239  Q
    |||||||||    
T  27591346 aaaataaaa 27591354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 27675843 - 27675951
Alignment:
Q  131 ttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttcccttttaaca 230  Q
    |||||||||| || ||||||| ||| |||   |||||||| | |||| | ||| |  |||||| | ||||||||| | |||||| |||||||||||||||    
T  27675843 ttgtcatctttttgaaggcctttcctttcttgtctattacggattccatggagtgcaaattcatacatatcatttcagttttaccagttcccttttaaca 27675942  T
Q  231 aaaataaaa 239  Q
    |||||||||    
T  27675943 aaaataaaa 27675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 26657703 - 26657656
Alignment:
Q  313 tcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttac 360  Q
    ||||||| | ||||||||||||||| |||||||| |||||||||||||    
T  26657703 tcatggttacagctaaaataacaaattgttcatagatatcaatcttac 26657656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 26763674 - 26763627
Alignment:
Q  313 tcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttac 360  Q
    ||||||| | ||||||||||||||| |||||||| |||||||||||||    
T  26763674 tcatggttacagctaaaataacaaattgttcatagatatcaatcttac 26763627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 26885822 - 26885764
Alignment:
Q  302 aaagagcaaagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttac 360  Q
    |||||| ||| ||||||| ||| |||||| || ||| ||||||||||||||||||||||    
T  26885822 aaagagaaaaatcatggttaaaactaaaacaaaaaattgttcataaatatcaatcttac 26885764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 27426052 - 27426113
Alignment:
Q  300 aaaaagagcaaagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttactc 362  Q
    |||||||||||||||||| | |||||| |||||||||| ||||| |  |||||||||||||||    
T  27426052 aaaaagagcaaagtcatgttaaaagct-aaataacaaattgttcctgcatatcaatcttactc 27426113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 26825546 - 26825509
Alignment:
Q  325 ctaaaataacaaagtgttcataaatatcaatcttactc 362  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  26825546 ctaaaataaaaaattgttcataaatatcaatcttactc 26825509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 26813285 - 26813233
Alignment:
Q  310 aagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttactc 362  Q
    |||||||||| ||||||||||| ||||| ||| | || |||||||||||||||    
T  26813285 aagtcatggttaaagctaaaatgacaaattgtccctagatatcaatcttactc 26813233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 27529513 - 27529637
Alignment:
Q  120 tgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagtt 219  Q
    ||||||||| |||||||||||||  ||||| | ||||||||| || ||  ||| |||| | |||||  | |||| || ||||||||  ||||| || |||    
T  27529513 tgttttgaggtttgtcatcttctcgaaggcatttccattccaatcaatatcagattccatggaggggaatttcatatttatcattttgattttccttgtt 27529612  T
Q  220 cccttttaacaaaaataaaataaaa 244  Q
    |||||||||||| || |||| ||||    
T  27529613 cccttttaacaacaaaaaaaaaaaa 27529637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 9e-52; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 28125801 - 28126020
Alignment:
Q  15 actagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatg 114  Q
    |||||||||||||||||||  |  ||||| |||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| |||||||     
T  28125801 actagatgatagagacttcgcattatatccttcccatatcaatactctcaaagtacttggaagatacttgggacttttggagaattgaccattttttata 28125900  T
Q  115 acaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttac 214  Q
    | ||||||||| ||||||| ||||||||| ||||| | || |||||| |||||||  |||||| | |||||| |||||  ||||||||||| ||| ||||    
T  28125901 ataagtgttttaagatttgacatcttcttgaaggcttttcgattccagtctattatgggttccatagagggataattccaatatatcatttcaatgttac 28126000  T
Q  215 tagttcccttttaacaaaaa 234  Q
     |||||||||||||||||||    
T  28126001 cagttcccttttaacaaaaa 28126020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 275
Target Start/End: Original strand, 266572 - 266734
Alignment:
Q  112 atgacaagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattt 211  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| |||   ||||||||||||||| | ||| |  |||||| ||||||||||| || ||    
T  266572 atgacaagtgttttgagatttgtcatcttcttgaaggcctttcctttctggtctattacaggttccatcgagtggaaattcatatatatcatttcaactt 266671  T
Q  212 tactagttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatataga 275  Q
    |||||||||||||||||| |||| |||| || || ||||||  |||||| ||||||||||||||    
T  266672 tactagttcccttttaac-aaaacaaaaaaacatgaatcaacaacaataaaaataagatataga 266734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 28131721 - 28131839
Alignment:
Q  116 caagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttact 215  Q
    |||||||||| ||||||| ||||||||| ||||||  || |||||| |||||||| |||||| ||||| ||||||| ||| ||||||||| |||||| |     
T  28131721 caagtgttttaagatttgacatcttcttgaaggccattcgattccagtctattacgggttccattgagtgacaattaagacatatcatttcaatttttcc 28131820  T
Q  216 agttcccttttaacaaaaa 234  Q
    |||||||||||||||||||    
T  28131821 agttcccttttaacaaaaa 28131839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 28130839 - 28130937
Alignment:
Q  15 actagatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttat 113  Q
    |||||||||||||| |||| ||  || |||| |||||||||||||||||||||||||||||| |||| | ||||||||| | |||||||||||||||||    
T  28130839 actagatgatagaggcttcgaaagatgtcttccccatatcaatactctcaaagtacttggaagatacttgggacttttgtagaattgaccactttttat 28130937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 28126124 - 28126184
Alignment:
Q  300 aaaaagagcaaagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttac 360  Q
    ||||||||  |||||||| | ||||||||||||||||| |||||||| |||||||||||||    
T  28126124 aaaaagagtgaagtcatgattaaagctaaaataacaaattgttcatagatatcaatcttac 28126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 28131936 - 28131996
Alignment:
Q  300 aaaaagagcaaagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttac 360  Q
    ||||||||| ||||||| || ||||| ||||||||||| |||||||| |||||||||||||    
T  28131936 aaaaagagccaagtcattgttaaagcaaaaataacaaattgttcatagatatcaatcttac 28131996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 8e-46; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 18697687 - 18697875
Alignment:
Q  117 aagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttacta 216  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| || ||| |||||||| || ||||||||||||| | |||||||||     
T  18697687 aagtgttttgagatttgtcatcttcttgaaggcctttccattccagtctattacgggatccgttgagggagaactcagatatatcatctcaattttactt 18697786  T
Q  217 gttcccttttaac--aaaaataaaataaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaa 303  Q
    |||||||||||||  ||||| |||||||||| ||||||  ||||||| ||||| |||| ||||||||||| |||||||| || ||||||    
T  18697787 gttcccttttaacagaaaaaaaaaataaaatgaatcaaccacaataccaataaaatattgagaacatgtaaatgtaattaagggtaaaa 18697875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 18722359 - 18722545
Alignment:
Q  117 aagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttacta 216  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| || ||| ||||| || |||||||||||||||| | |||||||||     
T  18722359 aagtgttttgagatttgtcatcttcttgaaggcctttccattccagtctattacgggatccgttgagcgagaattcagatatatcatctcaattttactt 18722458  T
Q  217 gttcccttttaacaaaaataaaataaaa-ttaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaa 303  Q
    |||||||||||||| ||| ||||||||| | ||||||  ||||||||||||| |||| ||||||||||| |||||||| || ||||||    
T  18722459 gttcccttttaacagaaa-aaaataaaactgaatcaaccacaatacaaataaaatattgagaacatgtaaatgtaattaagggtaaaa 18722545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 53 - 303
Target Start/End: Original strand, 18729717 - 18729970
Alignment:
Q  53 tcaatactctcaaagtacttggaatatacatagga-cttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcct 151  Q
    |||||||||||||| | ||||||| |||| | ||| |||| | ||||| ||| | |||| || | ||||||||||||||||||||||||||| || ||||    
T  18729717 tcaatactctcaaactgcttggaagatacttgggatctttagaaaaatagac-atttttaataataagtgttttgagatttgtcatcttcttgaaagcct 18729815  T
Q  152 ctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttcccttttaac--aaaaataaaat-aaaattaa 248  Q
     ||||||||| ||||||||  | ||| |||||||| |||||||||||||||| | ||||||||| |||||||||||||  ||||| ||||| ||||| ||    
T  18729816 ttccattccagtctattaccagatccattgagggagaattcagatatatcatctcaattttacttgttcccttttaacagaaaaaaaaaataaaaatgaa 18729915  T
Q  249 tcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaa 303  Q
    ||||  ||||||||||||| |||| ||||||||||| |||||||| || ||||||    
T  18729916 tcaaccacaatacaaataaaatattgagaacatgtaaatgtaattaagggtaaaa 18729970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 18653763 - 18653952
Alignment:
Q  117 aagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttacta 216  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||  | ||| |||||||| |||||||||||||||| | |||||||||     
T  18653763 aagtgttttgagatttgtcatcttcttgaaggcctttccattccagtctattaccagatccattgagggagaattcagatatatcatctcaattttactt 18653862  T
Q  217 gttcccttttaaca---aaaataaaataaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaa 303  Q
    ||||||||||||||   |||| | |  ||||| ||||||  ||||||||||||| |||| ||||||||||| |||||||| || ||||||    
T  18653863 gttcccttttaacagagaaaaaacataaaaatgaatcaaccacaatacaaataaaatattgagaacatgtaaatgtaattaagggtaaaa 18653952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 18687899 - 18688089
Alignment:
Q  117 aagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttacta 216  Q
    ||||||||||||||||||||||||||| || |||| ||||||||| ||||||||  | ||| |||||||| |||||||||||||||| | |||||||||     
T  18687899 aagtgttttgagatttgtcatcttcttgaaagcctttccattccagtctattaccagatccattgagggagaattcagatatatcatctcaattttactt 18687998  T
Q  217 gttcccttttaac----aaaaataaaataaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaa 303  Q
    |||||||||||||    ||||| |||| ||||  ||||||  ||||||||||||| |||| ||||||||||| |||||||| || ||||||    
T  18687999 gttcccttttaacagaaaaaaaaaaaaaaaaaagaatcaaccacaatacaaataaaatattgagaacatgtaaatgtaattaagggtaaaa 18688089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 18677845 - 18678032
Alignment:
Q  117 aagtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttacta 216  Q
    ||||||||||||||||||||||||||| |||| || ||||||||| ||||||||  | ||| |||||||| |||||||||||||||| | |||||||||     
T  18677845 aagtgttttgagatttgtcatcttcttgaaggtctttccattccagtctattaccagatccattgagggagaattcagatatatcatctcaattttactt 18677944  T
Q  217 gttcccttttaaca-aaaataaaat-aaaattaatcaatgacaatacaaataagatatagagaacatgtacatgtaattcagtgtaaaa 303  Q
    |||||||||||||| | || ||||| ||||| ||||||  ||||||||||||| |||| |||||||| || |||||||| || ||||||    
T  18677945 gttcccttttaacagataaaaaaataaaaatgaatcaaccacaatacaaataaaatattgagaacatata-atgtaattaagggtaaaa 18678032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 5089213 - 5089324
Alignment:
Q  55 aatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctctc 154  Q
    |||||||||||||||||||||| ||| | ||||  ||||||||| ||||||||||| |||||||||||||||||| || |||| ||||| ||||||| ||    
T  5089213 aatactctcaaagtacttggaaaatatacaggagctttggaaaaatgaccacttttaatgacaagtgttttgagaattttcattttcttgaaggcctttc 5089312  T
Q  155 cattccactcta 166  Q
    ||||||| ||||    
T  5089313 cattccaatcta 5089324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 271
Target Start/End: Complemental strand, 18075720 - 18075566
Alignment:
Q  121 gttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttc 220  Q
    |||||||| | |||||||||||| ||||||| |||||||   |||||||| | |||| | ||| |  |||||| ||||||||||| ||||||||| ||||    
T  18075720 gttttgaggtgtgtcatcttcttgaaggcctttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttc 18075621  T
Q  221 ccttttaac----aaaaataaaataaaattaatcaatgacaatacaaataagata 271  Q
    ||||||||     ||||| |||| || || ||||||  |||||||||||||||||    
T  18075620 ccttttaaacgaaaaaaaaaaaaaaagatgaatcaaccacaatacaaataagata 18075566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 18075503 - 18075442
Alignment:
Q  300 aaaaagagcaaagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttactc 362  Q
    |||||||||||||||||| | |||||| |||||||||| ||||| |  |||||||||||||||    
T  18075503 aaaaagagcaaagtcatgttaaaagct-aaataacaaattgttcctgcatatcaatcttactc 18075442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 17991334 - 17991597
Alignment:
Q  18 agatgatagagacttcaaagaatatctttcccatatcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgaca 117  Q
    |||||||||||||||  ||| | ||| || |||| |||||||||||||| || |||||| |||| | |||| ||  ||||| ||  || |||  |||| |    
T  17991334 agatgatagagactttgaaggacatcctttccatttcaatactctcaaactatttggaagatacttgggaccttcagaaaaatggtcattttcaatgata 17991433  T
Q  118 agtgttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactag 217  Q
    ||||||||||| ||| |||||||||| ||||||| |||||||||  || |||| | || | | ||     |||||  ||||||||||| |||||||||||    
T  17991434 agtgttttgagttttttcatcttcttgaaggcctttccattccagactgttacggatttcatggaatcgaaattcgtatatatcatttcaattttactag 17991533  T
Q  218 ttcccttttaacaaaaataaaataaaattaatcaatgacaatacaaataagatatagagaacatgtaca 286  Q
    |||||||  ||||     |||| ||||| ||||||  ||||||||||||||| |||||||| |||||||    
T  17991534 ttcccttcgaaca-----aaaaaaaaatgaatcaaccacaatacaaataagaaatagagaaaatgtaca 17991597  T

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Target: scaffold0003 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 271
Target Start/End: Complemental strand, 61528 - 61374
Alignment:
Q  121 gttttgagatttgtcatcttcttaaaggcctctccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttc 220  Q
    |||||||| | |||||||||||| ||||||| |||||||   |||||||| | |||| | ||| |  |||||| ||||||||||| ||||||||| ||||    
T  61528 gttttgaggtgtgtcatcttcttgaaggcctttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttc 61429  T
Q  221 ccttttaac----aaaaataaaataaaattaatcaatgacaatacaaataagata 271  Q
    |||||||||    ||||| |||| || || ||||||  |||||||||||||||||    
T  61428 ccttttaacgaaaaaaaaaaaaaaaagatgaatcaaccacaatacaaataagata 61374  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 61311 - 61250
Alignment:
Q  300 aaaaagagcaaagtcatggtcaaagctaaaataacaaagtgttcataaatatcaatcttactc 362  Q
    |||||||||||||||||| | |||||| |||||||||| ||||| |  |||||||||||||||    
T  61311 aaaaagagcaaagtcatgttaaaagct-aaataacaaattgttcctgcatatcaatcttactc 61250  T

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Target: scaffold0277 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 226
Target Start/End: Original strand, 11841 - 12014
Alignment:
Q  53 tcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctc 152  Q
    |||||||||||||| | ||||||| |||| |  ||| ||| ||||| || ||| |||  |||| ||| ||||| ||  ||||||||||||| |||||||     
T  11841 tcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggccattttcaatgataagcgttttcagtcttgtcatcttcttgaaggcctt 11940  T
Q  153 tccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttccctttt 226  Q
    ||| |||   ||||||||   |||||  |||||  |||||| ||||||||||| ||||||||||||||||||||    
T  11941 tcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaattttactagttccctttt 12014  T

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Target: scaffold0277; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 226
Target Start/End: Original strand, 2878 - 3051
Alignment:
Q  53 tcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctc 152  Q
    |||||||||||||| | ||||||| |||| |  ||| ||| ||||| ||  || |||  |||| ||| ||||| ||  ||||||||||||| |||||||     
T  2878 tcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggacattttcaatgataagcgttttcagtcttgtcatcttcttgaaggcctt 2977  T
Q  153 tccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttccctttt 226  Q
    ||| |||   ||||||||   |||||  |||||  |||||| ||||||||||| ||||||||||||||||||||    
T  2978 tcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaattttactagttccctttt 3051  T

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Target: scaffold1870 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 789 - 616
Alignment:
Q  53 tcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctc 152  Q
    |||||||||||||| | ||||||| |||| |  ||| ||| ||||| ||  || |||  |||| ||| ||||| ||  ||||||||||||| |||||||     
T  789 tcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggtcattttcaatgataagcgttttcagtcttgtcatcttcttgaaggcctt 690  T
Q  153 tccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttccctttt 226  Q
    ||| |||   ||||||||   |||||  |||||  |||||| ||||||||||| |||||| |||||||||||||    
T  689 tcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaatttttctagttccctttt 616  T

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Target: scaffold0419 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 9508 - 9335
Alignment:
Q  53 tcaatactctcaaagtacttggaatatacataggacttttggaaaattgaccactttttatgacaagtgttttgagatttgtcatcttcttaaaggcctc 152  Q
    |||||||||||||| | ||||||| |||| |  ||| ||| ||||| ||  || |||  |||| ||| ||||| ||  ||||||||||||| |||||||     
T  9508 tcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggacattttcaatgataagcgttttcagtcttgtcatcttcttgaaggcctt 9409  T
Q  153 tccattccactctattacaggttcctttgagggacaattcagatatatcatttgaattttactagttccctttt 226  Q
    ||| |||   ||||||||   |||||  |||||  |||||| ||||||||||| |||||| |||||||||||||    
T  9408 tcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaatttttctagttccctttt 9335  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 29272138 - 29272175
Alignment:
Q  195 atatatcatttgaattttactagttcccttttaacaaa 232  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  29272138 atatatcatttcaattttactagttcccttttaacaaa 29272175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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