View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6971_high_8 (Length: 308)

Name: NF6971_high_8
Description: NF6971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6971_high_8
NF6971_high_8
[»] chr1 (27 HSPs)
chr1 (1-308)||(20854068-20854375)
chr1 (1-308)||(20833208-20833515)
chr1 (1-307)||(22016053-22016359)
chr1 (1-308)||(19857049-19857356)
chr1 (1-308)||(21739344-21739651)
chr1 (1-165)||(18710303-18710467)
chr1 (1-268)||(24096923-24097190)
chr1 (1-224)||(21742860-21743083)
chr1 (1-229)||(20297235-20297463)
chr1 (1-229)||(48425727-48425955)
chr1 (1-229)||(31537305-31537533)
chr1 (1-229)||(38910134-38910362)
chr1 (1-229)||(52988595-52988823)
chr1 (1-228)||(37679904-37680131)
chr1 (45-229)||(12200372-12200556)
chr1 (1-104)||(20075017-20075120)
chr1 (1-173)||(20081684-20081856)
chr1 (47-250)||(16347949-16348152)
chr1 (51-154)||(16378992-16379095)
chr1 (47-250)||(17042369-17042572)
chr1 (47-250)||(51330846-51331049)
chr1 (32-153)||(24785196-24785317)
chr1 (47-219)||(19109201-19109373)
chr1 (1-142)||(22496564-22496705)
chr1 (47-142)||(33388383-33388478)
chr1 (47-142)||(21833212-21833307)
chr1 (47-153)||(21842111-21842217)
[»] chr5 (39 HSPs)
chr5 (1-308)||(22464593-22464900)
chr5 (1-308)||(20778556-20778863)
chr5 (1-308)||(20824096-20824403)
chr5 (1-308)||(28892360-28892667)
chr5 (2-308)||(23563587-23563893)
chr5 (1-267)||(17266752-17267018)
chr5 (1-229)||(23078323-23078551)
chr5 (1-229)||(20345004-20345232)
chr5 (1-229)||(22505401-22505629)
chr5 (1-268)||(25850755-25851022)
chr5 (1-222)||(14884409-14884630)
chr5 (1-268)||(21983595-21983862)
chr5 (1-153)||(21561443-21561595)
chr5 (47-250)||(21882493-21882696)
chr5 (28-154)||(25429236-25429362)
chr5 (47-250)||(16359221-16359424)
chr5 (47-250)||(18781833-18782036)
chr5 (47-250)||(27521125-27521328)
chr5 (47-250)||(34569213-34569416)
chr5 (47-250)||(40711499-40711702)
chr5 (51-153)||(23474011-23474113)
chr5 (47-250)||(22137387-22137590)
chr5 (47-250)||(27613075-27613278)
chr5 (47-142)||(29473537-29473632)
chr5 (47-250)||(41773561-41773764)
chr5 (47-153)||(22350735-22350841)
chr5 (49-250)||(27682866-27683067)
chr5 (1-113)||(21631817-21631929)
chr5 (47-250)||(21342878-21343081)
chr5 (47-142)||(22330351-22330446)
chr5 (47-250)||(27665954-27666157)
chr5 (64-165)||(20311654-20311755)
chr5 (47-142)||(14997203-14997298)
chr5 (47-142)||(19772787-19772882)
chr5 (47-142)||(37288960-37289055)
chr5 (47-153)||(20803413-20803519)
chr5 (51-153)||(21336762-21336864)
chr5 (51-153)||(26736195-26736297)
chr5 (203-268)||(21676454-21676519)
[»] scaffold0206 (1 HSPs)
scaffold0206 (12-308)||(25870-26166)
[»] chr6 (35 HSPs)
chr6 (1-308)||(15461929-15462236)
chr6 (1-308)||(19455616-19455923)
chr6 (1-308)||(24515795-24516102)
chr6 (1-276)||(21567372-21567647)
chr6 (1-268)||(18797323-18797590)
chr6 (1-308)||(19437595-19437902)
chr6 (1-268)||(10466229-10466496)
chr6 (1-268)||(14377297-14377564)
chr6 (1-143)||(20010835-20010977)
chr6 (1-283)||(34642967-34643249)
chr6 (20-268)||(21474233-21474481)
chr6 (1-228)||(24367073-24367300)
chr6 (1-98)||(19465971-19466068)
chr6 (1-225)||(25770520-25770744)
chr6 (52-153)||(23085257-23085358)
chr6 (1-153)||(19486675-19486827)
chr6 (47-250)||(27559396-27559599)
chr6 (1-153)||(18405325-18405477)
chr6 (47-250)||(29589866-29590069)
chr6 (65-140)||(23081184-23081259)
chr6 (47-153)||(28260624-28260730)
chr6 (47-153)||(28285186-28285292)
chr6 (47-153)||(28339373-28339479)
chr6 (59-153)||(30678463-30678557)
chr6 (1-153)||(5836609-5836761)
chr6 (1-154)||(22436616-22436769)
chr6 (47-219)||(28312312-28312484)
chr6 (47-142)||(2872229-2872324)
chr6 (47-142)||(16574649-16574744)
chr6 (47-142)||(16620636-16620731)
chr6 (47-142)||(24293209-24293304)
chr6 (47-250)||(25115203-25115406)
chr6 (236-308)||(8761370-8761442)
chr6 (65-173)||(19867415-19867523)
chr6 (47-153)||(16925067-16925173)
[»] chr3 (59 HSPs)
chr3 (1-308)||(10417509-10417816)
chr3 (1-308)||(31692649-31692956)
chr3 (1-308)||(18131810-18132117)
chr3 (4-308)||(31941261-31941565)
chr3 (1-294)||(12357991-12358284)
chr3 (1-283)||(13944407-13944689)
chr3 (1-268)||(16378398-16378665)
chr3 (1-308)||(17494004-17494312)
chr3 (1-308)||(11949389-11949679)
chr3 (1-304)||(12272700-12273003)
chr3 (1-268)||(16831992-16832259)
chr3 (1-268)||(16327173-16327440)
chr3 (1-276)||(24189694-24189969)
chr3 (1-283)||(8744854-8745136)
chr3 (1-307)||(12180703-12181009)
chr3 (1-308)||(16825745-16826052)
chr3 (1-268)||(11958645-11958912)
chr3 (20-283)||(14575369-14575632)
chr3 (1-276)||(17188764-17189039)
chr3 (117-308)||(13318082-13318273)
chr3 (1-265)||(14290996-14291260)
chr3 (1-229)||(28756756-28756984)
chr3 (1-222)||(10408412-10408633)
chr3 (1-229)||(12509947-12510175)
chr3 (1-245)||(12857959-12858203)
chr3 (1-229)||(47126381-47126609)
chr3 (1-89)||(13317998-13318086)
chr3 (1-268)||(15230001-15230268)
chr3 (1-268)||(15235869-15236136)
chr3 (47-250)||(20059575-20059778)
chr3 (51-153)||(15262133-15262235)
chr3 (47-250)||(12889115-12889318)
chr3 (47-250)||(13255096-13255299)
chr3 (47-250)||(16638179-16638382)
chr3 (47-250)||(43165081-43165284)
chr3 (51-153)||(14578933-14579035)
chr3 (47-245)||(15065482-15065680)
chr3 (28-154)||(17492353-17492479)
chr3 (47-224)||(48427879-48428056)
chr3 (47-250)||(10008006-10008209)
chr3 (52-146)||(15013284-15013378)
chr3 (47-153)||(15358586-15358692)
chr3 (47-153)||(16694667-16694773)
chr3 (47-250)||(3688349-3688552)
chr3 (47-142)||(10908724-10908819)
chr3 (47-142)||(15345766-15345861)
chr3 (47-142)||(15713577-15713672)
chr3 (47-250)||(24185596-24185799)
chr3 (47-153)||(6603238-6603344)
chr3 (51-153)||(12843628-12843730)
chr3 (47-153)||(15400038-15400144)
chr3 (47-153)||(15586913-15587019)
chr3 (47-153)||(16754222-16754328)
chr3 (47-153)||(53382539-53382645)
chr3 (47-250)||(5422451-5422654)
chr3 (47-142)||(26790934-26791029)
chr3 (51-173)||(14874093-14874215)
chr3 (203-268)||(14089071-14089136)
chr3 (203-268)||(44779645-44779710)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-308)||(70130-70437)
scaffold0034 (1-308)||(2191-2499)
[»] chr4 (34 HSPs)
chr4 (1-308)||(27903114-27903421)
chr4 (1-283)||(51604028-51604310)
chr4 (20-226)||(15354295-15354501)
chr4 (1-268)||(20892800-20893067)
chr4 (4-308)||(14993606-14993910)
chr4 (1-146)||(16150527-16150672)
chr4 (1-146)||(16154673-16154818)
chr4 (1-229)||(3262030-3262258)
chr4 (1-229)||(11204468-11204696)
chr4 (1-222)||(29450773-29450994)
chr4 (1-268)||(15073128-15073395)
chr4 (1-228)||(44659102-44659329)
chr4 (73-308)||(15258656-15258891)
chr4 (1-104)||(53750706-53750809)
chr4 (47-250)||(14162257-14162460)
chr4 (47-224)||(18224468-18224645)
chr4 (1-77)||(15266736-15266812)
chr4 (51-153)||(14696985-14697087)
chr4 (28-140)||(16038-16150)
chr4 (47-250)||(12479387-12479590)
chr4 (47-250)||(16234014-16234217)
chr4 (47-250)||(17092171-17092374)
chr4 (47-250)||(8389199-8389402)
chr4 (47-250)||(16250872-16251075)
chr4 (47-153)||(14683451-14683557)
chr4 (86-153)||(16219114-16219181)
chr4 (86-153)||(16222434-16222501)
chr4 (47-250)||(19634923-19635126)
chr4 (47-142)||(23958642-23958737)
chr4 (47-153)||(15144914-15145020)
chr4 (47-153)||(40475924-40476030)
chr4 (47-142)||(8050645-8050740)
chr4 (47-142)||(14301001-14301096)
chr4 (47-250)||(19775815-19776018)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-308)||(94133-94440)
scaffold0029 (1-283)||(115345-115627)
[»] chr7 (41 HSPs)
chr7 (1-308)||(13676170-13676477)
chr7 (1-268)||(11385652-11385919)
chr7 (1-308)||(15099826-15100133)
chr7 (1-229)||(14283597-14283825)
chr7 (1-268)||(13024104-13024371)
chr7 (1-268)||(14140438-14140705)
chr7 (1-283)||(18051176-18051458)
chr7 (1-268)||(12459387-12459654)
chr7 (1-268)||(15343190-15343457)
chr7 (1-268)||(16947695-16947962)
chr7 (1-308)||(12798724-12799031)
chr7 (1-229)||(21755210-21755438)
chr7 (1-268)||(14261469-14261735)
chr7 (1-229)||(26092021-26092249)
chr7 (1-283)||(19149755-19150037)
chr7 (1-283)||(20749154-20749436)
chr7 (1-270)||(13965891-13966160)
chr7 (1-228)||(26115813-26116040)
chr7 (1-229)||(49155099-49155327)
chr7 (1-229)||(40925040-40925268)
chr7 (1-245)||(12204023-12204267)
chr7 (45-250)||(44788640-44788845)
chr7 (47-250)||(8200824-8201027)
chr7 (47-250)||(14335172-14335375)
chr7 (47-250)||(14957330-14957533)
chr7 (185-308)||(16069704-16069827)
chr7 (52-306)||(15627244-15627498)
chr7 (45-153)||(18180616-18180724)
chr7 (47-250)||(11550393-11550596)
chr7 (47-153)||(9591237-9591343)
chr7 (65-250)||(10873466-10873651)
chr7 (47-142)||(8710489-8710584)
chr7 (47-142)||(11234504-11234599)
chr7 (47-142)||(13688925-13689020)
chr7 (47-250)||(17703746-17703949)
chr7 (47-142)||(18587462-18587557)
chr7 (65-153)||(12690375-12690463)
chr7 (65-140)||(14042581-14042656)
chr7 (65-140)||(14352611-14352686)
chr7 (47-142)||(15158348-15158443)
chr7 (203-268)||(19615434-19615499)
[»] scaffold0243 (2 HSPs)
scaffold0243 (1-308)||(10011-10318)
scaffold0243 (51-140)||(24234-24323)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-308)||(44666-44973)
scaffold0010 (1-229)||(39572-39800)
scaffold0010 (47-250)||(14240-14443)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-308)||(325465-325772)
scaffold0004 (1-283)||(200707-200989)
[»] scaffold0348 (2 HSPs)
scaffold0348 (1-283)||(5088-5370)
scaffold0348 (1-268)||(17723-17990)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-308)||(6796-7103)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-308)||(98822-99129)
scaffold0020 (1-245)||(175809-176053)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-267)||(39857-40123)
scaffold0114 (48-154)||(17635-17740)
[»] scaffold1530 (1 HSPs)
scaffold1530 (1-294)||(355-648)
[»] chr2 (31 HSPs)
chr2 (1-266)||(23273995-23274260)
chr2 (1-268)||(23097794-23098061)
chr2 (1-283)||(12576738-12577020)
chr2 (1-264)||(19716793-19717056)
chr2 (117-294)||(23279150-23279327)
chr2 (1-190)||(20848067-20848256)
chr2 (1-245)||(23113146-23113390)
chr2 (51-154)||(24817666-24817769)
chr2 (47-173)||(23105550-23105676)
chr2 (52-165)||(30208747-30208860)
chr2 (45-250)||(17001418-17001623)
chr2 (47-250)||(9338000-9338203)
chr2 (47-250)||(9486634-9486837)
chr2 (47-250)||(16983658-16983861)
chr2 (47-250)||(22323164-22323367)
chr2 (1-140)||(23074391-23074530)
chr2 (47-250)||(27220434-27220637)
chr2 (47-250)||(44383392-44383595)
chr2 (47-173)||(23029283-23029409)
chr2 (47-153)||(24657480-24657586)
chr2 (47-173)||(24677982-24678108)
chr2 (47-245)||(24712457-24712655)
chr2 (47-140)||(22733596-22733689)
chr2 (47-250)||(11351533-11351736)
chr2 (47-153)||(45673834-45673940)
chr2 (1-173)||(21323042-21323214)
chr2 (47-250)||(21142863-21143066)
chr2 (47-142)||(27373795-27373890)
chr2 (47-153)||(24705304-24705410)
chr2 (47-153)||(24874572-24874678)
chr2 (215-283)||(27790125-27790193)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-308)||(20572-20879)
scaffold0222 (2-276)||(727-1001)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-308)||(53805-54112)
[»] scaffold0067 (4 HSPs)
scaffold0067 (1-268)||(49419-49686)
scaffold0067 (1-268)||(58453-58720)
scaffold0067 (1-268)||(64841-65108)
scaffold0067 (2-308)||(29382-29688)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-308)||(151325-151632)
scaffold0011 (51-153)||(23822-23924)
[»] chr8 (36 HSPs)
chr8 (1-268)||(22027959-22028226)
chr8 (1-268)||(29301105-29301372)
chr8 (1-268)||(22053698-22053965)
chr8 (1-229)||(16268903-16269131)
chr8 (1-268)||(31414211-31414478)
chr8 (1-222)||(27357417-27357638)
chr8 (1-225)||(21928306-21928530)
chr8 (2-229)||(28983785-28984012)
chr8 (1-159)||(19985124-19985282)
chr8 (2-229)||(28989004-28989231)
chr8 (3-153)||(22373819-22373969)
chr8 (62-224)||(20390965-20391127)
chr8 (47-154)||(21253894-21254001)
chr8 (47-154)||(21391586-21391693)
chr8 (47-154)||(21780912-21781019)
chr8 (47-154)||(21786080-21786187)
chr8 (47-173)||(21164263-21164389)
chr8 (1-173)||(19980897-19981069)
chr8 (47-250)||(17671747-17671950)
chr8 (47-250)||(32602998-32603201)
chr8 (51-153)||(22989995-22990097)
chr8 (65-153)||(22245758-22245846)
chr8 (65-153)||(22246176-22246264)
chr8 (47-250)||(15536236-15536439)
chr8 (47-250)||(19115253-19115456)
chr8 (47-250)||(20015988-20016191)
chr8 (47-250)||(22129342-22129545)
chr8 (47-250)||(30310869-30311072)
chr8 (47-153)||(18859527-18859633)
chr8 (51-153)||(22375183-22375284)
chr8 (51-153)||(22421621-22421723)
chr8 (47-250)||(22042680-22042883)
chr8 (47-142)||(22117900-22117995)
chr8 (51-142)||(22523507-22523598)
chr8 (47-142)||(22031064-22031159)
chr8 (47-142)||(22126684-22126779)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-303)||(5448-5750)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-229)||(1093-1321)
[»] scaffold0605 (1 HSPs)
scaffold0605 (133-308)||(1180-1355)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-268)||(8412-8679)
[»] scaffold0074 (2 HSPs)
scaffold0074 (1-268)||(14921-15188)
scaffold0074 (51-153)||(6026-6128)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-267)||(919-1185)
[»] scaffold1288 (1 HSPs)
scaffold1288 (1-308)||(94-401)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-308)||(63758-64065)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-268)||(263024-263291)
[»] scaffold0298 (1 HSPs)
scaffold0298 (1-303)||(9466-9767)
[»] scaffold0476 (2 HSPs)
scaffold0476 (1-268)||(784-1051)
scaffold0476 (51-153)||(10699-10801)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-268)||(10025-10292)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-268)||(65537-65804)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-308)||(110368-110675)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-294)||(36711-37004)
[»] scaffold0235 (2 HSPs)
scaffold0235 (2-268)||(8702-8967)
scaffold0235 (2-268)||(18916-19181)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-308)||(49863-50170)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-308)||(34095-34402)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-268)||(21649-21916)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-268)||(21920-22187)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-258)||(20767-21022)
scaffold0261 (1-258)||(12587-12842)
[»] scaffold0056 (1 HSPs)
scaffold0056 (27-229)||(1148-1350)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-266)||(164640-164905)
scaffold0023 (47-154)||(151993-152100)
scaffold0023 (51-153)||(47272-47373)
[»] scaffold0102 (2 HSPs)
scaffold0102 (20-276)||(42488-42744)
scaffold0102 (1-173)||(50584-50756)
[»] scaffold1433 (1 HSPs)
scaffold1433 (1-268)||(1550-1817)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-268)||(7542-7809)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-268)||(251420-251687)
[»] scaffold0708 (1 HSPs)
scaffold0708 (1-229)||(5384-5612)
[»] scaffold1477 (1 HSPs)
scaffold1477 (16-308)||(977-1261)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-268)||(67347-67614)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-268)||(49116-49383)
[»] scaffold0046 (2 HSPs)
scaffold0046 (1-268)||(60537-60804)
scaffold0046 (1-93)||(70081-70173)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-283)||(53662-53944)
scaffold0076 (203-268)||(31118-31183)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-198)||(203249-203446)
[»] scaffold0523 (1 HSPs)
scaffold0523 (20-267)||(2670-2917)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-178)||(5693-5870)
scaffold0035 (130-308)||(5509-5687)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-153)||(12640-12792)
[»] scaffold0001 (4 HSPs)
scaffold0001 (1-229)||(514592-514820)
scaffold0001 (51-151)||(441568-441668)
scaffold0001 (51-151)||(495935-496035)
scaffold0001 (215-308)||(452666-452759)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-268)||(10775-11042)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-268)||(11758-12025)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-307)||(4940-5246)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-229)||(30565-30786)
[»] scaffold1032 (1 HSPs)
scaffold1032 (1-178)||(1054-1231)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-270)||(29730-29999)
[»] scaffold1373 (1 HSPs)
scaffold1373 (1-229)||(73-301)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-229)||(298-526)
[»] scaffold0443 (1 HSPs)
scaffold0443 (1-222)||(11653-11874)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-266)||(29327-29592)
[»] scaffold0405 (1 HSPs)
scaffold0405 (22-268)||(5400-5646)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-268)||(4128-4395)
[»] scaffold0865 (1 HSPs)
scaffold0865 (20-245)||(1530-1755)
[»] scaffold0133 (1 HSPs)
scaffold0133 (20-245)||(28543-28768)
[»] scaffold0509 (1 HSPs)
scaffold0509 (1-224)||(11672-11893)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-229)||(41572-41800)
[»] scaffold0117 (1 HSPs)
scaffold0117 (39-283)||(3447-3691)
[»] scaffold0104 (2 HSPs)
scaffold0104 (1-225)||(43658-43882)
scaffold0104 (66-192)||(25090-25216)
[»] scaffold0765 (1 HSPs)
scaffold0765 (1-104)||(6496-6599)
[»] scaffold1056 (1 HSPs)
scaffold1056 (1-222)||(1565-1786)
[»] scaffold0335 (2 HSPs)
scaffold0335 (1-117)||(4543-4659)
scaffold0335 (175-245)||(4663-4733)
[»] scaffold0079 (2 HSPs)
scaffold0079 (137-308)||(3476-3647)
scaffold0079 (47-250)||(36314-36517)
[»] scaffold0585 (1 HSPs)
scaffold0585 (1-153)||(4328-4480)
[»] scaffold0358 (1 HSPs)
scaffold0358 (47-154)||(8862-8969)
[»] scaffold0018 (2 HSPs)
scaffold0018 (51-154)||(9640-9743)
scaffold0018 (51-154)||(23587-23690)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-74)||(9260-9333)
[»] scaffold0028 (3 HSPs)
scaffold0028 (203-308)||(47955-48060)
scaffold0028 (47-153)||(11382-11488)
scaffold0028 (47-153)||(17850-17956)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-153)||(17791-17943)
[»] scaffold1423 (1 HSPs)
scaffold1423 (47-154)||(663-770)
[»] scaffold0540 (1 HSPs)
scaffold0540 (47-154)||(11165-11272)
[»] scaffold0423 (1 HSPs)
scaffold0423 (28-154)||(2529-2655)
[»] scaffold0270 (2 HSPs)
scaffold0270 (51-153)||(6786-6888)
scaffold0270 (51-153)||(13916-14018)
[»] scaffold0331 (1 HSPs)
scaffold0331 (1-154)||(15218-15371)
[»] scaffold0077 (2 HSPs)
scaffold0077 (65-153)||(57917-58005)
scaffold0077 (203-294)||(19075-19166)
[»] scaffold0084 (1 HSPs)
scaffold0084 (47-154)||(8135-8242)
[»] scaffold0342 (1 HSPs)
scaffold0342 (51-153)||(14555-14657)
[»] scaffold0333 (1 HSPs)
scaffold0333 (47-153)||(18563-18669)
[»] scaffold0042 (2 HSPs)
scaffold0042 (51-153)||(26265-26367)
scaffold0042 (45-173)||(37103-37231)
[»] scaffold0550 (1 HSPs)
scaffold0550 (47-219)||(10443-10615)
[»] scaffold0148 (1 HSPs)
scaffold0148 (28-152)||(1913-2037)
[»] scaffold1459 (1 HSPs)
scaffold1459 (47-250)||(1317-1520)
[»] scaffold0431 (1 HSPs)
scaffold0431 (47-250)||(10184-10387)
[»] scaffold0324 (1 HSPs)
scaffold0324 (51-154)||(1901-2004)
[»] scaffold0218 (1 HSPs)
scaffold0218 (47-154)||(24997-25104)
[»] scaffold0109 (1 HSPs)
scaffold0109 (47-250)||(40971-41174)
[»] scaffold0080 (5 HSPs)
scaffold0080 (47-250)||(10523-10726)
scaffold0080 (51-154)||(54549-54652)
scaffold0080 (49-250)||(31699-31900)
scaffold0080 (47-250)||(13178-13381)
scaffold0080 (49-250)||(37165-37366)
[»] scaffold0055 (1 HSPs)
scaffold0055 (47-250)||(22063-22266)
[»] scaffold0293 (1 HSPs)
scaffold0293 (51-153)||(15335-15437)
[»] scaffold0100 (1 HSPs)
scaffold0100 (59-153)||(21482-21576)
[»] scaffold0006 (1 HSPs)
scaffold0006 (51-153)||(104140-104242)
[»] scaffold0411 (1 HSPs)
scaffold0411 (47-140)||(8336-8429)
[»] scaffold0304 (1 HSPs)
scaffold0304 (203-308)||(926-1031)
[»] scaffold0181 (1 HSPs)
scaffold0181 (45-250)||(29211-29416)
[»] scaffold0621 (1 HSPs)
scaffold0621 (51-159)||(4341-4449)
[»] scaffold0282 (1 HSPs)
scaffold0282 (51-151)||(13768-13868)
[»] scaffold0146 (1 HSPs)
scaffold0146 (212-308)||(5524-5620)
[»] scaffold0075 (1 HSPs)
scaffold0075 (28-140)||(55736-55848)
[»] scaffold0259 (1 HSPs)
scaffold0259 (47-250)||(8074-8277)
[»] scaffold0044 (2 HSPs)
scaffold0044 (47-250)||(16976-17179)
scaffold0044 (47-142)||(3348-3443)
[»] scaffold0017 (3 HSPs)
scaffold0017 (47-250)||(17351-17554)
scaffold0017 (51-152)||(24220-24321)
scaffold0017 (1-141)||(195077-195217)
[»] scaffold2111 (1 HSPs)
scaffold2111 (185-283)||(10-108)
[»] scaffold0413 (1 HSPs)
scaffold0413 (47-153)||(3514-3620)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-46)||(2087-2132)
[»] scaffold0138 (1 HSPs)
scaffold0138 (219-308)||(113-202)
[»] scaffold0022 (3 HSPs)
scaffold0022 (65-153)||(41545-41633)
scaffold0022 (65-153)||(75265-75353)
scaffold0022 (47-153)||(35000-35106)
[»] scaffold0993 (1 HSPs)
scaffold0993 (47-154)||(894-1001)
[»] scaffold0501 (1 HSPs)
scaffold0501 (51-154)||(12575-12678)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-140)||(14010-14149)
[»] scaffold0207 (1 HSPs)
scaffold0207 (65-140)||(8042-8117)
[»] scaffold0177 (1 HSPs)
scaffold0177 (47-250)||(11641-11844)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-55)||(19208-19262)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-119)||(40746-40864)
[»] scaffold0081 (2 HSPs)
scaffold0081 (47-173)||(21497-21623)
scaffold0081 (47-173)||(36921-37047)
[»] scaffold0575 (1 HSPs)
scaffold0575 (51-140)||(4509-4598)
[»] scaffold0403 (1 HSPs)
scaffold0403 (47-104)||(14873-14930)


Alignment Details
Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 20854068 - 20854375
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20854068 ttgtttcattgctttagaatgtgcatataagttgggcctaattgtatctgatatgaaaggggaaatggttgttgaaactccagccaagggttcagtaact 20854167  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20854168 acttctcttgtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccgttgttgggaatggatgttattttcg 20854267  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  20854268 ggatgaattggttagagtataaccgagtctgtataaattgttttaacaagacggtgcacttttcttctgcggaagaggagagtggagcagagtttctaac 20854367  T
Q  301 tactaaac 308  Q
    ||||||||    
T  20854368 tactaaac 20854375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 20833208 - 20833515
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | |||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||  ||||||||  |||||    
T  20833208 ttgtttcattgttattgaatgttcttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagataagggttcattaact 20833307  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  |||||||||||||||||| |    
T  20833308 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggaatggatgttatttttg 20833407  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||||||||||| |||||| ||||||| || |||||    
T  20833408 ggatgaactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctacggaagaagagagtggagcagaattcctaac 20833507  T
Q  301 tactaaac 308  Q
    || |||||    
T  20833508 tattaaac 20833515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 22016053 - 22016359
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  22016053 ttgtttcattgatgttgattgtgcatataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 22016152  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| |||||| |||| ||| ||| ||||  ||| |||||||| ||||| |    
T  22016153 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacctagtttgtttaccgttgacgggtatggatgtaatttttg 22016252  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| | ||||| || ||| |||| ||||| |||||    
T  22016253 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgcagaagaagatagtggagctgagttcctaac 22016352  T
Q  301 tactaaa 307  Q
    |||||||    
T  22016353 tactaaa 22016359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 19857356 - 19857049
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | |||||||| |||||||||||| || ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  19857356 ttgtttcattgttattgaatgtgcttataagttgggtatggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 19857257  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||  ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||   || ||||||| |||||| |    
T  19857256 acttctcttgtttgcctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgactggtatggatgatatttttg 19857157  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| |  ||||||||||||||||||  ||| |||||||||| |||||  ||||| ||||||||| | ||||| |||||| |||||||||| ||| |    
T  19857156 ggatgaacttgttagagtataaccgagttcatatcaattgttttagcaagacagtgcatttttcttctgctgaagaagagagtggagcagagttcctatc 19857057  T
Q  301 tactaaac 308  Q
    ||| ||||    
T  19857056 tacaaaac 19857049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 21739344 - 21739651
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||  || |||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  21739344 ttgtttcattgctgttgattgtgcatataagttgggtcttgttttatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 21739443  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||||||| || ||||| || ||||| |||||||||||||||||||| ||||| |||||  |||| ||| | | ||||  ||| |||||||| ||||| |    
T  21739444 acttttcttgtttgtttgagttgtccattgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttgacgggtatggatgtaatttttg 21739543  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || |||||||||||||| |||  ||| ||||| ||||  |||| || ||| ||||||||| | ||||| ||||||  ||| |||||  ||||    
T  21739544 ggatgaactggttagagtataaccgtgttcatattaattgctttagtaagacggcgcatttttcttctgctgaagaagagagtgaagctgagttcttaac 21739643  T
Q  301 tactaaac 308  Q
    ||||||||    
T  21739644 tactaaac 21739651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 18710467 - 18710303
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||| |||||||| ||||||    
T  18710467 ttgtttcattgctattgaatgtgcttataagttgcgtctggttgtatctgatatgagaggggaaatggttgttgaaactccagctaagggttcagtaact 18710368  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagt 165  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  18710367 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagt 18710303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 24096923 - 24097190
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| ||  ||||||| |||||||||| |||||||||||||||| |||||| |||||||| |||| |    
T  24096923 ttgtttcattgctattgaatgtgcttataagttgggtttggatgtatctaatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaatt 24097022  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || || ||||| |||||||||||||||||||| ||||  ||||||||||| ||| | | ||||  ||| ||||||||||||||      
T  24097023 acttctcttgtttgcttgagatgtccattgtctatgtttggtagagactttgtagtcgacttagtttgtttgccgttgacgggtatggatgttattttta 24097122  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| |||||||||    
T  24097123 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttct 24097190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21742860 - 21743083
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  21742860 ttgtttcattgttgttgattgtgcatataagttgggtctgattgtatctgatatgaatggagaaatggttgttgaaactccagctaagggttcggtaact 21742959  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    || | ||| || ||||| || |||| ||||||||||||||||||||| ||||| |||||  |||| ||| | | ||||| |||  ||||||| ||||| |    
T  21742960 acgtctcttgtttgtttgagttgtctgttgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttgtcgggtgtggatgtgatttttg 21743059  T
Q  201 ggatgaattgattagagtataacc 224  Q
    ||||||| || |||||||||||||    
T  21743060 ggatgaactggttagagtataacc 21743083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20297463 - 20297235
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  20297463 ttgttttattgctattgaatgtgcttataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 20297364  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | | |||||||||||||||||||| ||| || ||||| ||||| | ||||  ||| |||||||| || || |    
T  20297363 acttctcttgtttgtctggggtgtcctatatttatgtttggtagagattttgtggttgatttagtttgtctgccgttgacgggtatggatgtgatctttg 20297264  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||||||||||    
T  20297263 gaatgaattggttagagtataaccgagtt 20297235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 48425955 - 48425727
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  48425955 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 48425856  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  48425855 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 48425756  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  48425755 gtatgaattggttagagtataatcgagtt 48425727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 31537305 - 31537533
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  31537305 ttgttttattgctattgaatgtgcatataagttgggtttggatgtgtctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 31537404  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||||| ||||  ||| ||||||||||| || |    
T  31537405 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctaccgttgacgggtatggatgttatctttg 31537504  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||| ||||| ||||||    
T  31537505 gtatgaattggttagaatataatcgagtt 31537533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38910134 - 38910362
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||     
T  38910134 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaagggaaaatggttgttgaaactccagctaagggttcagtaacc 38910233  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| |||||||| ||||| |    
T  38910234 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgtgatttttg 38910333  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  38910334 gtatgaattggttagagtataatcgagtt 38910362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 52988823 - 52988595
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  52988823 ttgttttattgctattgaatgtgcttataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 52988724  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  52988723 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 52988624  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  52988623 gtatgaattggttagagtataatcgagtt 52988595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 37680131 - 37679904
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  37680131 ttgttttattgctattgaatgtgcatataagttgggtttggatatatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 37680032  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  37680031 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 37679932  T
Q  201 ggatgaattgattagagtataaccgagt 228  Q
    | |||||||| ||||||| ||| |||||    
T  37679931 gtatgaattggttagagtttaatcgagt 37679904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 12200556 - 12200372
Alignment:
Q  45 tatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtag 144  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| |||| ||| || ||| |  |||||||  | ||||||||||||||    
T  12200556 tatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaaccacttctcttgtttgtctgcggtgtcccatatctatgtttggtag 12200457  T
Q  145 agattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtt 229  Q
    |||||||| | | || ||||||||||| | ||||  ||| |||||||| ||||| || |||||||| ||||||||||| ||||||    
T  12200456 agattttgtgattgatttagtgtgtctgccgttgacgggtatggatgtgatttttggtatgaattggttagagtataatcgagtt 12200372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20075017 - 20075120
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  20075017 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 20075116  T
Q  101 actt 104  Q
    ||||    
T  20075117 actt 20075120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20081684 - 20081856
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || ||||| | ||  ||||||||  || | ||||||||||| || || |||||||| |||| |||||| |||||||| || |||    
T  20081684 ttgttttattgctttcgattgtgcttctactttgggtcttgttatgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgact 20081783  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctac 173  Q
    |||| ||| || ||||| |  ||||| ||||||||||||||| | ||||||||| | || ||||| |||||||    
T  20081784 acttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgattttgagatggatttagtttgtctac 20081856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 16347949 - 16348152
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  16347949 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 16348048  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  16348049 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 16348148  T
Q  247 caag 250  Q
    ||||    
T  16348149 caag 16348152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 16379095 - 16378992
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||||| ||||| ||||||||||||||| | |||||    
T  16379095 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtttgtttaagatgtcctttgtctatgtttggtcgtgattt 16378996  T
Q  151 tgag 154  Q
    ||||    
T  16378995 tgag 16378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 17042369 - 17042572
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  17042369 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 17042468  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  17042469 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 17042568  T
Q  247 caag 250  Q
    ||||    
T  17042569 caag 17042572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 51330846 - 51331049
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  51330846 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 51330945  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  51330946 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 51331045  T
Q  247 caag 250  Q
    ||||    
T  51331046 caag 51331049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 24785196 - 24785317
Alignment:
Q  32 ttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgt 131  Q
    ||||||||  || ||||||||||||| || || ||||| ||||||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||    
T  24785196 ttgggtcttgttttatctgatatgaatggagagatggtcgttgaaattccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgt 24785295  T
Q  132 ctatgtttggtagagattttga 153  Q
    ||||||||||| | ||||||||    
T  24785296 ctatgtttggtcgtgattttga 24785317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 219
Target Start/End: Complemental strand, 19109373 - 19109201
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| |||||| ||||| |  ||||| |||||||||||||||   |    
T  19109373 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctagtatgtttgaaatgtcctttgtctatgtttggtcatg 19109274  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| ||||||||    
T  19109273 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagta 19109201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22496564 - 22496705
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || ||||| | ||  ||||||||  || | ||||||||||| || || |||||||| |||| |||||| |||||||| || |||    
T  22496564 ttgttttattgctttcgattgtgcttctacattgggtcttgttatgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgact 22496663  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    |||| ||| || ||||| |  ||||| |||||||||||||||    
T  22496664 acttctctcgtatgtttgaaatgtcctttgtctatgtttggt 22496705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 33388383 - 33388478
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  33388383 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 33388478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 21833307 - 21833212
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| || ||||||||||||    
T  21833307 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtctgtttgaaatgtcctttatctatgtttggt 21833212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 21842217 - 21842111
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || || ||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||  ||||||||||||||| | |    
T  21842217 tctgatatgaatggagagattgttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcatttgtctatgtttggtcgtg 21842118  T
Q  147 attttga 153  Q
    |||||||    
T  21842117 attttga 21842111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 22464900 - 22464593
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  22464900 ttgtttcattgctttagaatgtgcatataagttgggcctaattgtatctgatatgaaaggggaaatggttgttgaaactccagccaagggttcagtaact 22464801  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  22464800 acttctcttgtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtatgtctaccgttgttgggaatggatgttattttcg 22464701  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  22464700 ggatgaattggttagagtacaaccgagtctgtataaattgttttaacaagacggtgcacttttcttctgcggaagaggagagtggagcagagtttctaac 22464601  T
Q  301 tactaaac 308  Q
    ||||||||    
T  22464600 tactaaac 22464593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 20778863 - 20778556
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  20778863 ttgtttcattgctttagaatgtgcatataagttgggcctaattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtgact 20778764  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  20778763 acttctcttgtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccgttgttggggatggatgttattttcg 20778664  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  20778663 ggatgaattggttagagtataaccgagtctgtattaattgttttaacaagacggtgcacttttcttctgcggaagaagagagtggagcacagtttctaac 20778564  T
Q  301 tactaaac 308  Q
    ||||||||    
T  20778563 tactaaac 20778556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 20824403 - 20824096
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  20824403 ttgtttcattgctttagagtgtgcatataagttgggtctgattatatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtaact 20824304  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  20824303 acttctctggtgtgtttaaggtgtccgttgtctatgtttggtagagatttcgaggtcgatttagtgtgtctaccgttgttggggatggatgttattttcg 20824204  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||  |||||| |||||| ||||||||||||||||    
T  20824203 ggatgaattggttagagtataaccgagtctgtattaattgttttaacaagacggtgcacttttcttctgtggaagaagagagtggagcagagtttctaac 20824104  T
Q  301 tactaaac 308  Q
    ||||||||    
T  20824103 tactaaac 20824096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 28892360 - 28892667
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  28892360 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtaact 28892459  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| || ||||    
T  28892460 acttctctggtgtgtctaaggtgtccgttgtctatgtttggtagagattttgaagtcgacttagtgtgtctaccgttgttggggatggatgtcatcttcg 28892559  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||  |||||| |||||| ||||||||||||||||    
T  28892560 ggatgaattggttagagtataaccgagtctgtattaattgttttaacaagacggtgcacttttcttctgtggaagaagagagtggagcagagtttctaac 28892659  T
Q  301 tactaaac 308  Q
    ||||||||    
T  28892660 tactaaac 28892667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 23563587 - 23563893
Alignment:
Q  2 tgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaacta 101  Q
    ||||| |||||| | ||||||||||||||||||||| ||  | |||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  23563587 tgtttaattgctattgaatgtgcatataagttgggtatggatatatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaacta 23563686  T
Q  102 cttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgg 201  Q
    ||| ||| || ||| |||||||| |||||||||||||||||||||| ||||| ||||||||||| ||| |||  |||  ||| |||||||||||||| ||    
T  23563687 cttctcttgtttgtctaaggtgtacgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccattgacgggtatggatgttatttttgg 23563786  T
Q  202 gatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaact 301  Q
    |||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||||| ||||| |||||| |||||||||| ||| ||    
T  23563787 gatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctacagaagaagagagtggagcagagttgctatct 23563886  T
Q  302 actaaac 308  Q
    |||||||    
T  23563887 actaaac 23563893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 17266752 - 17267018
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||| ||||||| || |||| ||| | |||||||| |||||||||||||||| |||||| |||||||| || |||    
T  17266752 ttgtttcattgctttagaaagtgcatataggttgggtttgtttgtgtctaacatgaaaggagaaatggttgttgaaactccagctaagggttcagtgact 17266851  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || ||||||||  | ||||||||||||||||||||||| || |||||||| ||| | | ||||  |||||||||||||||||| |    
T  17266852 acttctcttgtttgcttgaggtgtccaatttctatgtttggtagagattttgaagtagacttagtttgtttgccgttgacgggaatggatgttatttttg 17266951  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttc 267  Q
    |||||||||| |||||||||||| |||||  ||| || |||||||  |||| ||| || ||||||||    
T  17266952 ggatgaattggttagagtataactgagttcatatcaactgttttagtaagacggtacatttttcttc 17267018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23078323 - 23078551
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||  | |||||||| |||||||||||| ||  ||||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  23078323 ttgtttcattgcaattgaatgtgcttataagttgggtttggatgtatctgatatgaagggagaaatggttgttgaaactccagctaagggttcagtaact 23078422  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| || || || ||||| |||||||||||||||||||| ||||  || ||  || | ||| | | ||||| ||| |||||||||||||| |    
T  23078423 acttctctagtttgcttgagatgtccattgtctatgtttggtagagactttgtagttgatctaatttgtttgccgttgtcgggtatggatgttatttttg 23078522  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    |||||||||| ||||||||||||||||||    
T  23078523 ggatgaattggttagagtataaccgagtt 23078551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 20345232 - 20345004
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||     
T  20345232 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcaataacc 20345133  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | ||| |||||||||||||||||| ||| || ||||| ||||| | ||||| ||| |||||||||||||| |    
T  20345132 acttctcttgtttgtctggggtgtcctatatctttgtttggtagagattttgtggttgatttagtttgtctgccgttgtcgggtatggatgttatttttg 20345033  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||| ||||| ||||||    
T  20345032 gaatgaattggttagaatataatcgagtt 20345004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22505629 - 22505401
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||| ||||||||||||||||||||||||||| |||||| ||||||||  |||||    
T  22505629 ttgttttattgctattgaatgtgcttataagttgggtttggatgtatctaatatgaaaggggaaatggttgttgaaactccagctaagggttcaataact 22505530  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||  ||||||||||| ||| || ||||| ||| ||| ||||  ||| |||||||| ||||| |    
T  22505529 acttctcttgtttgtctggggtgtcctatatctatgtttcatagagattttgtggtggatttagtttgtttaccgttgacgggtatggatgtgatttttg 22505430  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||||||||||    
T  22505429 gaatgaattggttagagtataaccgagtt 22505401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 25851022 - 25850755
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||     
T  25851022 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaaaggttcagtaacc 25850923  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||| |||||||||| |    
T  25850922 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatgaatgttatttttg 25850823  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||| ||||| ||||||  ||| ||||| | ||  |||| |||||| |||||||||    
T  25850822 gaatgaattggttagaatataatcgagttcatatcaattgctatagtaagacggtgcatttttcttct 25850755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 14884409 - 14884630
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  14884409 ttgttttattgctattgaatgtgcatataagttgggtttagatgtgtctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 14884508  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  14884509 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtcttccgttgacgggtatggatgttatctttg 14884608  T
Q  201 ggatgaattgattagagtataa 222  Q
    | |||||||| ||||| |||||    
T  14884609 gtatgaattggttagaatataa 14884630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 21983595 - 21983862
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || | ||   |||||  || |||||||||||||||| |||||| |||||||| ||||||    
T  21983595 ttgtttcattgctgttgattgtgcatataagttgggtctggttatgtcaagtatgagtggagaaatggttgttgaaactccagctaagggttcagtaact 21983694  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||| ||||||||||||||||||||| || ||  |||| ||| | | ||||  ||| |||||||| || || |    
T  21983695 acttctctcgtttgtttgagttgtccattgtttatgtttggtagagattttgaagttgatctagtatgtttgccgttgacgggtatggatgtaatctttg 21983794  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || || ||||||||||  |||  ||| ||||||||||  |||| |||||| |||||||||    
T  21983795 ggatgaactggttggagtataaccatgttcatatcaattgttttagtaagacggtgcatttttcttct 21983862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 21561443 - 21561595
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || |||||||||||||| ||| || || | ||   |||||  || |||||||||||||||| |||||| |||||||| ||||||    
T  21561443 ttgtttcattgctgttgattgtgcatataagttaggtatggttatgtcaagtatgagtggagaaatggttgttgaaactccagctaagggttcagtaact 21561542  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||| ||| || ||||| || ||||| ||||||||||||||||||||||||||    
T  21561543 acttctctcgtttgtttgagttgtccattgtctatgtttggtagagattttga 21561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 21882696 - 21882493
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |    
T  21882696 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttgtctatgtttggtcgtg 21882597  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||| | || ||||| |||||||  ||    || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  21882596 attttgagatggatttagtttgtctacctttaagcggtatggatgtgattcttggtatgaattggttagagtacaaccatgttcatattaattgttttag 21882497  T
Q  247 caag 250  Q
    ||||    
T  21882496 caag 21882493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 25429362 - 25429236
Alignment:
Q  28 taagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccg 127  Q
    ||||||||||||  || | | ||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| |||||     
T  25429362 taagttgggtcttgttatgtttgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtccc 25429263  T
Q  128 ttgtctatgtttggtagagattttgag 154  Q
    ||||||||||||| | | |||||||||    
T  25429262 ttgtctatgtttgatcgtgattttgag 25429236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 16359424 - 16359221
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  16359424 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 16359325  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  16359324 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 16359225  T
Q  247 caag 250  Q
    ||||    
T  16359224 caag 16359221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 18782036 - 18781833
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||||||||||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  18782036 tctgatatgaatggagagatggttgttgaaactccagctaagggttccgtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 18781937  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || | ||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  18781936 attttgaaatggattaagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 18781837  T
Q  247 caag 250  Q
    ||||    
T  18781836 caag 18781833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 27521328 - 27521125
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  27521328 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 27521229  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  27521228 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 27521129  T
Q  247 caag 250  Q
    ||||    
T  27521128 caag 27521125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 34569416 - 34569213
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  34569416 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 34569317  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  34569316 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 34569217  T
Q  247 caag 250  Q
    ||||    
T  34569216 caag 34569213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 40711702 - 40711499
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  40711702 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 40711603  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  40711602 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 40711503  T
Q  247 caag 250  Q
    ||||    
T  40711502 caag 40711499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 23474113 - 23474011
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| |||| || ||| ||||| ||||||||||||||| |||||||    
T  23474113 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtattaaagatgtcctttgtctatgtttggtcgagattt 23474014  T
Q  151 tga 153  Q
    |||    
T  23474013 tga 23474011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 22137590 - 22137387
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||| |||||||||| | |    
T  22137590 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtttatgtttggtcgtg 22137491  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  22137490 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 22137391  T
Q  247 caag 250  Q
    ||||    
T  22137390 caag 22137387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 27613278 - 27613075
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  27613278 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 27613179  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  27613178 attttgaaatggatttagtttgtctacccttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 27613079  T
Q  247 caag 250  Q
    ||||    
T  27613078 caag 27613075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 29473537 - 29473632
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  29473537 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 29473632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 41773764 - 41773561
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||| | ||||||||||||||| | |    
T  41773764 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtactttgtctatgtttggtcgcg 41773665  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  41773664 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 41773565  T
Q  247 caag 250  Q
    ||||    
T  41773564 caag 41773561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 22350841 - 22350735
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  22350841 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttatctcgtatgtttgaaatgtcctttgtctatgtttggtcgcg 22350742  T
Q  147 attttga 153  Q
    |||||||    
T  22350741 attttga 22350735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 250
Target Start/End: Original strand, 27682866 - 27683067
Alignment:
Q  49 tgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagat 148  Q
    ||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |||    
T  27682866 tgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgat 27682965  T
Q  149 tttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaaca 248  Q
    || ||  | || |||||||||||||  |||   || |||||||| ||| | || ||||| || |||||||| ||||  |||  ||| |||||||||| ||    
T  27682966 ttcgaaatggatttagtgtgtctacctttgagcggtatggatgtgattctgggtatgaactgtttagagtacaaccacgttcttattaattgttttagca 27683065  T
Q  249 ag 250  Q
    ||    
T  27683066 ag 27683067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21631817 - 21631929
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | || ||||| | ||||||||||||  || | ||  ||||||| |||||||||||||| |||| |||||| |||||||| || |||    
T  21631817 ttgttttattgctgttgattgtgcttctaagttgggtcttgttatgtcgaatatgaatggggaaatggttgtcgaaactccagctaagggttcggtgact 21631916  T
Q  101 acttttctagtgt 113  Q
    |||| ||||||||    
T  21631917 acttctctagtgt 21631929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 21342878 - 21343081
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||| | | |    
T  21342878 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttgatcgtg 21342977  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| ||| |||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  21342978 attttgaaatggatttagtttgtataccattgaacggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 21343077  T
Q  247 caag 250  Q
    ||||    
T  21343078 caag 21343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 22330351 - 22330446
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  22330351 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 22330446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 27665954 - 27666157
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||  | |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  27665954 tctgatatgaatggagagatggttgtcgaaactccgactaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 27666053  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  27666054 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 27666153  T
Q  247 caag 250  Q
    ||||    
T  27666154 caag 27666157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 20311755 - 20311654
Alignment:
Q  64 aatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgactta 163  Q
    ||||||||| ||||  ||| | |||||||| || ||||||| |||||| || || | |||||| ||||| |||||||||||||||||||  || ||||||    
T  20311755 aatggttgtcgaaaccccaactaagggttcggtgactacttctctagtatgcttgaagtgtcctttgtcgatgtttggtagagattttgcagtggactta 20311656  T
Q  164 gt 165  Q
    ||    
T  20311655 gt 20311654  T

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Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 14997203 - 14997298
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  14997203 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 14997298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 19772882 - 19772787
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  19772882 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 19772787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 37288960 - 37289055
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||| ||||||||    
T  37288960 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctttgtttggt 37289055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 20803519 - 20803413
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| ||  | |||||||| |||| |||||| |||||||  || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  20803519 tctgatatgaatggaaagatggttgtcgaaactccagctaagggtttggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 20803420  T
Q  147 attttga 153  Q
    |||||||    
T  20803419 attttga 20803413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 21336762 - 21336864
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||  |||||||  || ||||||| ||  ||||||||||| ||||  ||||||||||||||| | |||||    
T  21336762 atatgaatggagagatggttgtcgaaactccagttaagggtttggtgactacttctcgtgtgtgtttaagatgtcttttgtctatgtttggtcgcgattt 21336861  T
Q  151 tga 153  Q
    |||    
T  21336862 tga 21336864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 26736195 - 26736297
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||| | |||||||  || ||||||| ||| || |||||||| ||||| ||||||||||||| | | |||||    
T  26736195 atatgaatggagagatggttgtcgaaactccaactaagggtttggtgactacttctcttgtatgtttaagatgtcctttgtctatgtttgatcgtgattt 26736294  T
Q  151 tga 153  Q
    |||    
T  26736295 tga 26736297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 21676454 - 21676519
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||| || ||||||||||||||||||  ||| ||||||||||  |||| |||||| |||||||||    
T  21676454 atgaactggttagagtataaccgagttcatatcaattgttttagtaagacggtgcatttttcttct 21676519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 12 - 308
Target Start/End: Complemental strand, 26166 - 25870
Alignment:
Q  12 ctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagt 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  26166 ctttagaatgtgcatataagttgggcctgattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtaactacttctctagt 26067  T
Q  112 gtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattga 211  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||     
T  26066 ttgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccgttgatgggaatggatgttattttcgggatgaattgg 25967  T
Q  212 ttagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||  | ||| ||||||||||||||||||||||||    
T  25966 ttagagtataaccgagtttgtataaattgttttaacaagacggtgcacttttcttcttcggaagaacatagtggagcagagtttctaactactaaac 25870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 15462236 - 15461929
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  15462236 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtaact 15462137  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  15462136 acttctctggtgtgtctaaggtgtccgttatctatgtttggtagagattttgaggtcgacttagtgtgtctaccgttgttggggatggatgttatcttcg 15462037  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||| |||||||||| |||||| |||||| ||||||||||||||||    
T  15462036 ggatgaattggttagaatataaccgagtttgtattaattgttttaacaagacggtgcatttttcttctatggaagaagagagtggagcagagtttctaac 15461937  T
Q  301 tactaaac 308  Q
    ||||||||    
T  15461936 tactaaac 15461929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 19455923 - 19455616
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  19455923 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggtgaaatggttgttgaaactccagctaagggttcagtaact 19455824  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| ||| |||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  ||| |||||||||||||| |    
T  19455823 acttctcttgtttgtctaagttgttcgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggtatggatgttatttttg 19455724  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| |  |||| |||||| |||||||||| ||| |    
T  19455723 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttcttcttaagaagagagtggagcagagttcctatc 19455624  T
Q  301 tactaaac 308  Q
    ||||||||    
T  19455623 tactaaac 19455616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 24515795 - 24516102
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||  ||| ||||  |||||    
T  24515795 ttgtttcattgttattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagttaagtgttcattaact 24515894  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||| ||||  |||||||||  ||||||| |    
T  24515895 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgatctagtgtgtttaccgttgacgggaatggacattatttttg 24515994  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||| ||||||| |||||| ||||| | || |||||    
T  24515995 ggatgaactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcaaaattcctaac 24516094  T
Q  301 tactaaac 308  Q
    ||||||||    
T  24516095 tactaaac 24516102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 21567372 - 21567647
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||| || ||||||||||||| |||||| |||||||| ||||||    
T  21567372 ttgtttcattgctttagaatgtgcatattagttgggtttgattgtaactgacatgaaaggagagatggttgttgaaactccagctaagggttcagtaact 21567471  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||| |||||||||||||||||||| ||||  ||| |||||||| ||||| |    
T  21567472 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgtggtcgacttagtgtgtctaccgttgacgggtatggatgtcatttttg 21567571  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaaga 276  Q
    | ||||| |  ||||||||||||||||||  ||| ||||| ||||  |||| |||||| ||||||||| |||||||    
T  21567572 gaatgaactagttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttctgcggaaga 21567647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 18797590 - 18797323
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| || ||| |||||||| || |||    
T  18797590 ttgtttcattgctttagaatgtgcatataagttgggtttgattgtatctgacatgaaaggagagatggttgttgaaactctagctaagggttcagtgact 18797491  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| |||| |||  | |||||||||||||| ||||||||||| |||||||||||| ||| | ||  ||| |||||||||||||| |    
T  18797490 acttctcttgtttgtttgaggtttcctatatctatgtttggtagggattttgaggtagacttagtgtgtttaccgctgacgggtatggatgttatttttg 18797391  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  |||||| || |||| |||||  ||||| |||||||||    
T  18797390 ggatgaattggttagagtataaccgagttcatataaactgctttagcaagacagtgcatttttcttct 18797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 19437902 - 19437595
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||| ||||  |||||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  19437902 ttgtttcattgctattgaatgtgcttataagttgagtctagttgtatctgatatgaagggagaaatggttgttgaaactccagctaagggttcagtaact 19437803  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| |||||||||| |||||||| |||||| ||||| ||||||||||| ||| | |  |||   || |||||||||||||| |    
T  19437802 acttctcttgtttgtctaagttgtccgttgtttatgtttgttagagactttgaagtcgacttagtttgttttcctttgactggtatggatgttatttttg 19437703  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| |  ||||||||||||||||||  ||| |||||||||| ||||| |||||| |||||||||  |||||| ||| || ||||| | || |||||    
T  19437702 ggatgaacttgttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctgtggaagaagagggtggagcaaaattcctaac 19437603  T
Q  301 tactaaac 308  Q
    ||||||||    
T  19437602 tactaaac 19437595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 10466229 - 10466496
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  10466229 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 10466328  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||||||||||| ||| |||||||||||||| || |||| ||| || ||||| ||| ||| ||||  ||| |||||||||||||| |    
T  10466329 acttctcttgtctgtttaaggtgtctgttatctatgtttggtagggactttgtggttgatttagtttgtttaccgttgacgggtatggatgttatttttg 10466428  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||| ||||| ||||||||||||||||||  ||| || || ||||  |||| |||||| |||||||||    
T  10466429 ggataaattggttagagtataaccgagttcatatcaactgctttagtaagacggtgcatttttcttct 10466496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 14377297 - 14377564
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| || ||||||||||||||||||| |||||||||||||||| |||||| |||||||  ||| ||    
T  14377297 ttgtttcattgctattgaatgtgcttataagttgggtttggttgtatctgatatgaaaggagaaatggttgttgaaactccagcaaagggtttagtagct 14377396  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||| ||||||||||||||||||||| || || ||||||||||| ||| |   |||| |||| |||||||||||||| |    
T  14377397 acttctcttgtttgtctaaggtgtctgttgtctatgtttggtagagacttcgaagtcgacttagtttgtttgtcgttgatgggtatggatgttatttttg 14377496  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | ||||| |  ||||||||||||||||||  ||| || || ||||  |||| |||||| |||||||||    
T  14377497 gaatgaactagttagagtataaccgagttcatatcaactgctttagtaagacggtgcatttttcttct 14377564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 20010835 - 20010977
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| ||||||||||| || || |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20010835 ttgtttcattgctttagaatgtgcttataagttgggcctaatcgtatctaatatgaaaggggaaatggttgttgaaactccagccaagggttcagtaact 20010934  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggta 143  Q
    |||| ||| |||||||||||||||||||||||||| |||||||    
T  20010935 acttctcttgtgtgtttaaggtgtccgttgtctatttttggta 20010977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 34642967 - 34643249
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||| ||||| |||||  ||||| ||||||| |||||||||||||| |||||||| ||||||| ||| || |||||||| || |||    
T  34642967 ttgtttcattgctttagagtgtgcttataaactgggtttgattgtgtctgatatgaaaggagaaatggtcgttgaaactccggctaagggttcagtgact 34643066  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || |||||  | |||||||||||||| |||||||| || ||| |||| ||  |||  |||  ||| ||||||||||| || |    
T  34643067 acttctcttgtttgtttgagatgtcctatatctatgtttggtagggattttgaagtagacctagtttgcttacctttgacggggatggatgttatatttg 34643166  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||| ||||||||||||||||||  ||| || || ||||| ||||  || || ||||||||| | ||||| ||||||    
T  34643167 ggatgaattggttagagtataaccgagttcatatcaactgctttaataagactgtacatttttcttctgctgaagaagagagt 34643249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 21474481 - 21474233
Alignment:
Q  20 tgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaa 119  Q
    ||||||||||||||||||||| || | |||||||||||  |  ||||||||||||||| |||||| |||||||| |||||||||| ||  || ||||| |    
T  21474481 tgtgcatataagttgggtctggttatgtctgatatgaatagaaaaatggttgttgaaactccagctaagggttcagtaactacttctcatgtttgtttga 21474382  T
Q  120 ggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    | ||||| |||||||||||||||||||| ||||| || ||  | || ||| |   ||||  ||| |||||||| || || |||||||| || ||||||||    
T  21474381 gttgtccattgtctatgtttggtagagactttgaagttgatcttgtatgtttgtcgttgacgggtatggatgtaatctttgggatgaactggttagagta 21474282  T
Q  220 taaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||||||  ||| ||||||||||  |||| ||| || |||||||||    
T  21474281 taaccgagttcatattaattgttttagtaagacggtacatttttcttct 21474233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24367300 - 24367073
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||||||| ||||||||| |  | ||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||     
T  24367300 ttgttttattgctattgaatgtgcatatcagttgggtccggatatatctgatatgaaaggggaaatggttgttgaaactccagctaaggattcagtaacc 24367201  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | ||||| |||||||||||||||| | | || ||||| ||||| | |||   ||| ||||||||||| || |    
T  24367200 acttctcttgtttgtctgcggtgtcctatatctatctttggtagagattttgtgattgatttagtttgtctgccgttcacgggtatggatgttatctttg 24367101  T
Q  201 ggatgaattgattagagtataaccgagt 228  Q
    | |||||||| ||||||| ||| |||||    
T  24367100 gtatgaattggttagagtttaatcgagt 24367073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19466068 - 19465971
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaa 98  Q
    ||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||    
T  19466068 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaa 19465971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 25770744 - 25770520
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||| ||||||||||||||| || | ||||||||||| || |||||||||||||||  |||||| ||||||||  | |||    
T  25770744 ttgtttcattgttgttgattgtgcttataagttgggtctggttatgtctgatatgaatggagaaatggttgttgaatctccagcaaagggttcaatcact 25770645  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||| ||||| || ||| | || ||| | |  |||  ||| |||||||| || || |    
T  25770644 acttctcttgtttgtttgagttgtccattgtctatgtttggtagagactttgaagttgaccttgtatgtttgccattgacgggtatggatgtaatctttg 25770545  T
Q  201 ggatgaattgattagagtataaccg 225  Q
    ||||||| || ||||||||||||||    
T  25770544 ggatgaactggttagagtataaccg 25770520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 23085257 - 23085358
Alignment:
Q  52 tatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagatttt 151  Q
    |||||| || ||||||||||| |||| |||||| |||||||| || ||||||| ||||||||||||||| ||||| || |||||||||||||||||||||    
T  23085257 tatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctctagtgtgtttaagatgtcctttatctatgtttggtagagatttt 23085356  T
Q  152 ga 153  Q
    ||    
T  23085357 ga 23085358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 19486675 - 19486827
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| |  | ||   |||||   | |||||||||||||||| |||||| |||||||  ||||||    
T  19486675 ttgtttcattgctgttgattgtgcatataagttgggtctggtcatgtcaagtatgagtagagaaatggttgttgaaactccagctaagggtttagtaact 19486774  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||| ||| || ||||| || |||| |||||||||||||||||||||||||||    
T  19486775 acttctcttgtttgtttgagttgtctgttgtctatgtttggtagagattttga 19486827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 27559396 - 27559599
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |    
T  27559396 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttgtctatgtttggtcgtg 27559495  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||| |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  27559496 attttgaaatggatttagtttgtctacttttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 27559595  T
Q  247 caag 250  Q
    ||||    
T  27559596 caag 27559599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 18405325 - 18405477
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || |||||   ||||||||||||   | | ||||||||||| || || |||||||| |||| |||||| |||||||| || |||    
T  18405325 ttgttttattgcttttgattgtgctactaagttgggtcttgctatgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgact 18405424  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||| ||| |||||||| || ||||| ||||||||||||| | | ||||||||    
T  18405425 acttctcttgtgtgtttgagatgtcccttgtctatgtttgattgtgattttga 18405477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 29589866 - 29590069
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  29589866 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 29589965  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  29589966 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 29590065  T
Q  247 caag 250  Q
    ||||    
T  29590066 caag 29590069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 23081259 - 23081184
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| |||||||||||||    
T  23081259 atggttgtcgaaactccagctaagggttcagtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttg 23081184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 28260624 - 28260730
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  28260624 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 28260723  T
Q  147 attttga 153  Q
    |||||||    
T  28260724 attttga 28260730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 28285292 - 28285186
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  28285292 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 28285193  T
Q  147 attttga 153  Q
    |||||||    
T  28285192 attttga 28285186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 28339373 - 28339479
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  28339373 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 28339472  T
Q  147 attttga 153  Q
    |||||||    
T  28339473 attttga 28339479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 30678463 - 30678557
Alignment:
Q  59 ggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||||||||||||| |||| |||||| |||||||  || ||||||| |||||||||| | | |||| ||||||| ||||||||| |||| |||||    
T  30678463 ggggaaatggttgtcgaaactccagctaagggtttggttactacttctctagtgtgtctgaagtgttcgttgtcgatgtttggtcgagactttga 30678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5836609 - 5836761
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtct-gattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaac 99  Q
    |||||| |||||||| || ||||| ||||  |||||||| |||| | ||||||||||| || || |||||||| |||| |||||| |||||||| |||||    
T  5836609 ttgttttattgcttttgattgtgcttatactttgggtcttgatt-tgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtaac 5836707  T
Q  100 tacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||   |||||| ||||| |  ||||| || |||||||||||| | ||||||||    
T  5836708 taccactctagtatgtttgaaatgtcctttttctatgtttggtcgtgattttga 5836761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22436769 - 22436616
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || ||||| | ||  ||||||||  || | ||||||||||| || || |||||||| |||| |||||| |||||||| || |||    
T  22436769 ttgttttattgctttcgattgtgcttctactttgggtcttgttatgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgact 22436670  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgag 154  Q
    |||| ||| || ||||| |  ||| | ||||||||||||||| | |||||||||    
T  22436669 acttctctcgtatgtttgaaatgttctttgtctatgtttggtcgtgattttgag 22436616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 219
Target Start/End: Complemental strand, 28312484 - 28312312
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || | ||| |  ||||| ||||||||||||||| | |    
T  28312484 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatttttgaaatgtcctttgtctatgtttggtcgtg 28312385  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || ||||||||    
T  28312384 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagta 28312312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 2872229 - 2872324
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  2872229 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 2872324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 16574744 - 16574649
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  16574744 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 16574649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 16620636 - 16620731
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  16620636 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 16620731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 24293209 - 24293304
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  24293209 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 24293304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 25115406 - 25115203
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||| |||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  25115406 tctgatatgaatggagagatgattgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 25115307  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  25115306 attttgaaatggatttagtttgtctacccttgagtggtatggatgtgattctgggtatgaactggttagagtacaaccacgttcttattaattgttttag 25115207  T
Q  247 caag 250  Q
    ||||    
T  25115206 caag 25115203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 8761370 - 8761442
Alignment:
Q  236 aattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    ||||| |||| ||||| |||||| ||||||||| || |||| |||||| ||||||||||  ||||||||||||    
T  8761370 aattgctttagcaagacggtgcaattttcttctgcgaaagaagagagtggagcagagttcttaactactaaac 8761442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 19867523 - 19867415
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttag 164  Q
    |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | ||||| ||| | || ||||    
T  19867523 atggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgatttcgagatggatttag 19867424  T
Q  165 tgtgtctac 173  Q
    | |||||||    
T  19867423 tttgtctac 19867415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 16925067 - 16925173
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||| || |||| |||||| ||||| || || ||||||| ||| || ||||| || ||||| || |||||||||||| | |    
T  16925067 tctgatatgaatggagagatggtcgtcgaaactccagctaagggatcggtgactacttctctcgtatgtttgagatgtcctttttctatgtttggtcgtg 16925166  T
Q  147 attttga 153  Q
    |||||||    
T  16925167 attttga 16925173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 10417509 - 10417816
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||    
T  10417509 ttgtttcattgctttagagtgtgcatataagttgggtctgattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtgact 10417608  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  10417609 acttctctggtgtgtctaaggtgtccgttgtctatgtttggtagagatttcgaggtcgacttagtgtgtctaccgttgttggggatggatgttattttcg 10417708  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||  |||||| |||||| ||||||||||||||||    
T  10417709 ggatgaattggttagagtataactgagtttgtattaattgttttaacaagacggtgcacttttcttctgtggaagaagagagtggagcagagtttctaac 10417808  T
Q  301 tactaaac 308  Q
    ||||||||    
T  10417809 tactaaac 10417816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 31692649 - 31692956
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||| | |||| |||||||| ||||||    
T  31692649 ttgtttcattgctattgaatgtgcttataagtcgggtctggttgtatctgatatgaaaggagaaatggttgttgaaacttcagctaagggttcagtaact 31692748  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||  |||||||||||||||||| |    
T  31692749 acttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtgtgtttaccgttgacgggaatggatgttatttttg 31692848  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| |||||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||| ||||||| ||||||   ||||| || |||||    
T  31692849 ggatgaactgattagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtgttgcagaattcctaac 31692948  T
Q  301 tactaaac 308  Q
    ||||||||    
T  31692949 tactaaac 31692956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 18131810 - 18132117
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||    
T  18131810 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggggaaacggttgttgaaactccagctaagggttcagtaact 18131909  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||| ||||||||||||||||||||| | ||| ||||||||||||||| ||| ||||  ||| ||||||||||||||      
T  18131910 acttctcttgtttgtctaaggtgtctgttgtctatgtttggtagagactatgaagtcgacttagtgtgtttaccgttgacgggtatggatgttatttttt 18132009  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| ||||||| |||||| |||||||||| |||||    
T  18132010 ggatgaattggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttgctaac 18132109  T
Q  301 tactaaac 308  Q
    ||||||||    
T  18132110 tactaaac 18132117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 308
Target Start/End: Complemental strand, 31941565 - 31941261
Alignment:
Q  4 tttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactact 103  Q
    |||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||   |||||||||    
T  31941565 tttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggtctagtaactact 31941466  T
Q  104 tttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcggga 203  Q
    | ||| |||||| ||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||| ||| ||||  |||||||||||||||||| ||||    
T  31941465 tctcttgtgtgtctaaggtgcccgttgtctatgtttggcagagactttgaagtcgacttagtgtgtttaccgttgacgggaatggatgttatttttggga 31941366  T
Q  204 tgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactac 303  Q
    |||| || ||||||||||||||||||  |||||||||||||| |||||  ||||| ||||||||| ||||||| |||||| ||||||| || ||||||||    
T  31941365 tgaactggttagagtataaccgagttcatataaattgttttagcaagacagtgcatttttcttctgcggaagaagagagtggagcagaattcctaactac 31941266  T
Q  304 taaac 308  Q
    |||||    
T  31941265 taaac 31941261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 12357991 - 12358284
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||| |||||| |||||||| ||||||    
T  12357991 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggaaaaatggttgttgaaactccagctaagggttcagtaact 12358090  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||  ||||  ||| |||||||||||||| |    
T  12358091 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttagcgttgacgggtatggatgttatttttg 12358190  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtt 294  Q
     |||||| || ||||||||||||||||||  ||| |||||||||| ||| | |||||| ||||||||||||||||| |||||| ||||||||||    
T  12358191 cgatgaactggttagagtataaccgagttcatatcaattgttttagcaaaacggtgcatttttcttctacggaagaagagagtggagcagagtt 12358284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 13944689 - 13944407
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| |||||  ||||| ||||||| ||||||||| |||| |||||||||||||||| |||||| |||||||| || |||    
T  13944689 ttgtttcattgctttagaatgtgcttataaactgggtttgattgtgtctgatatggaaggagaaatggttgttgaaactccagctaagggttcagtgact 13944590  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| || || ||||||||  | ||||||||||||||||||||||| || |||||||| ||||||| ||||  |||||||||||||||||| |    
T  13944589 acttctctagtttgcttgaggtgtccaatttctatgtttggtagagattttgaagtagacttagtttgtctaccgttgacgggaatggatgttatttttg 13944490  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||| ||||||||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||| | ||||| ||||||    
T  13944489 ggatgaattggttagagtataaccgagttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagt 13944407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 16378398 - 16378665
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||| |||||| |||||||| ||||||    
T  16378398 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatattaaaggagaaatggttgttgaaactccagctaagggttcagtaact 16378497  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  |||||||||||||||||| |    
T  16378498 acttctcttgtttgcttgaggtgtccaatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggatgttatttttg 16378597  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  ||| || |||||||  |||| ||| || |||||||||    
T  16378598 ggatgaattggttagagtataaccgagttcatatcaactgttttagtaagacggtacatttttcttct 16378665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 17494312 - 17494004
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaa-tccagccaagggttctgtaac 99  Q
    ||||||||||||| | |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||    
T  17494312 ttgtttcattgctattgaatgtgcttataaattgggtctggttgtatctgatatgaaaggagaaatggttgttgaaaactccagctaagggttcagtaac 17494213  T
Q  100 tacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttc 199  Q
    || || ||| || ||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  ||| ||| ||||||||||     
T  17494212 taattctcttgtttgtctaagatgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggtatgtatgttattttt 17494113  T
Q  200 gggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaa 299  Q
    |||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||| | ||||||||| | ||||| |||||| | ||||| || ||||    
T  17494112 gggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtggatttttcttctgctgaagaagagagtggggcagaattcctaa 17494013  T
Q  300 ctactaaac 308  Q
    |||| ||||    
T  17494012 ctacgaaac 17494004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 11949389 - 11949679
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  11949389 ttgtttcattgctattgaatgtggttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 11949488  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||||||| ||                 ||||||||||||||||||| ||||| ||||||||||| ||| ||| |||| ||||||||||||||||||| |    
T  11949489 acttttcttgt-----------------tgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgatgggaatggatgttatttttg 11949571  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
     |||||| || || |||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||| ||||||| |||||| |||||||||| |||||    
T  11949572 cgatgaactggttcgagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctaac 11949671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 12273003 - 12272700
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || | ||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  12273003 ttgtttcattgttgttgactatgcatttaagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 12272904  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||||||||| |||||||||||||||||||| ||||| |||||  |||| ||| ||| ||||  ||| |||||||| ||||| |    
T  12272903 acttctcttgtttgtctaaggtgtccattgtctatgtttggtagagactttgaagtcgatctagtttgtttaccgttgacgggtatggatgtaatttttg 12272804  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| | ||||| |||||| |||| ||||| |||||    
T  12272803 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctaac 12272704  T
Q  301 tact 304  Q
    ||||    
T  12272703 tact 12272700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 16831992 - 16832259
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  |||||||||||||||| |||||| |||||||| ||||||    
T  16831992 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaagaagaaatggttgttgaaactccagctaagggttcagtaact 16832091  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  ||||||||| |||||||| |    
T  16832092 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggacgttatttttg 16832191  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| ||| || |||||||||    
T  16832192 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtacatttttcttct 16832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 16327173 - 16327440
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| | |||||||| ||||||    
T  16327173 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccaactaagggttcagtaact 16327272  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||  |||||||  | |||||||||||||||||||| | ||| || ||||| ||  | | ||||| ||||||||||||||||||||    
T  16327273 acttctcttgtttgtttggggtgtcctatatctatgtttggtagagatttcgtggttgatttagtttgcttgccgttgtcgggaatggatgttattttcg 16327372  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  ||| || || ||||  |||| |||||| |||||||||    
T  16327373 ggatgaattggttagagtataaccgagttcatatcaactgctttagtaagacggtgcatttttcttct 16327440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 24189969 - 24189694
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || || ||||||||||| | |||||| |||||||| || |||    
T  24189969 ttgtttcattgctttagaatgtgcatataaattgggtttgattgtatctgatatgaagggagagatggttgttgagactccagctaagggttcagtgact 24189870  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||||||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| | | ||| | ||  |||||||||||||||||| |    
T  24189869 acttttctcgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttttttaccgctgacgggaatggatgttatttttg 24189770  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaaga 276  Q
    | |||||||| ||||| ||||||||||||  ||| || || |||| ||||| |||||| ||||||||| |||||||    
T  24189769 gaatgaattggttagaatataaccgagttcatatcaactgctttagcaagacggtgcatttttcttctgcggaaga 24189694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 8744854 - 8745136
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||| |||||||||||||||| |||||| |||||||| || |||    
T  8744854 ttgtttcattgctttagaaagtgcatataggttgggtttgattgtgtctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtgact 8744953  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || ||||||||  | ||||||||||||||||||||||| || |||||||| ||| | | | ||  |||||||||||||||||| |    
T  8744954 acttctcttgtttgcttgaggtgtccaatttctatgtttggtagagattttgaagtagacttagtttgtttgccgctgacgggaatggatgttatttttg 8745053  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||| ||||||||||| ||||||  ||| ||||| ||||||||||  ||||| ||||||||| | ||||| ||||||    
T  8745054 ggatgaattggttagagtataatcgagttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagt 8745136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 12181009 - 12180703
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||| | |||||| |||||||| ||||||    
T  12181009 ttgtttcattgctattgaatgtgcttataagttgggtctgtttgtatctaatatgaaaggagaaatggttgttgacactccagctaagggttcagtaact 12180910  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||  ||| |||||||||||||||||||||||||| ||||| ||||||||||| | | ||| ||||  ||| |||| |||||| || |    
T  12180909 acttctcttgtttgtccaagatgtccgttgtctatgtttggtagagactttgaagtcgacttagtttctttaccgttgacgggtatggttgttatctttg 12180810  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||  | |||||  ||||||||| | |||||||||||| |||||||||| ||| |    
T  12180809 ggatgaactggttagagtataaccgagttcatatcaattgctttagcagaacggtgcttttttcttctgctgaagatgagagtggagcagagttcctatc 12180710  T
Q  301 tactaaa 307  Q
    |||||||    
T  12180709 tactaaa 12180703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 16825745 - 16826052
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||| |||||| |||||||| ||||||    
T  16825745 ttgtttcattgctgttgattgtgcatataagttgggtctggttgtatctgatatgaaaggataaatggttgttgaaactccagctaagggttcagtaact 16825844  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| ||||||||||||||  |||||||||| ||||| |||||  | || ||| ||| ||||  ||| |||||||| ||||| |    
T  16825845 acttctcttgtttgtctaagttgtccgttgtctataattggtagagactttgaagtcgatcttgtttgtttaccgttgacgggtatggatgtgatttttg 16825944  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| ||||  |||| | |||| ||||||||| | ||||| |||||| |||| ||||| |||||    
T  16825945 ggatgaactggttagagtataaccgagttcatatcaattgctttagtaagacgatgcatttttcttctgctgaagaagagagtggagctgagttcctaac 16826044  T
Q  301 tactaaac 308  Q
    ||||||||    
T  16826045 tactaaac 16826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 11958645 - 11958912
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  11958645 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 11958744  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | ||||||||||||||||| |||| ||| || ||||| ||| |   ||||| ||| ||||||||||||||||    
T  11958745 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagactttgtggttgatttagtttgtttgtcgttgtcgggtatggatgttattttcg 11958844  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||| | ||||  ||| || || ||||  |||| |||||| |||||||||    
T  11958845 gtatgaattggttagagtataatccagttcatatcaactgctttagtaagacggtgcatttttcttct 11958912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 14575632 - 14575369
Alignment:
Q  20 tgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaa 119  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||||| ||| || ||| |||    
T  14575632 tgtgcatataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaactacttctcttgtttgtctaa 14575533  T
Q  120 ggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||| ||| ||| ||||  ||| |||||||| ||||| || ||||| || ||||| ||    
T  14575532 ggtgtccgttgtctatgtttggtagagactttgaagtcgacctagtttgtttaccgttgacgggtatggatgtaatttttggaatgaactggttagatta 14575433  T
Q  220 taaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||| | |||| ||||| ||||  |||| | |||| ||||||||| | ||||| ||||||    
T  14575432 taaccgagctcgtattaattgctttagtaagacgatgcatttttcttctgctgaagaagagagt 14575369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 17189039 - 17188764
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | || || ||||||||||||| |||||| |||||||| || |||    
T  17189039 ttgtttcattgctttagaatgtgcatataaattgggtttgattgtatctgatatggagggagagatggttgttgaaactccagctaagggttcagtgact 17188940  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | ||||||||||||||||||||||| || |||||||| ||| ||||| ||  |||||| |||||||||||      
T  17188939 acttctctcgtttgtttgaggtgtcctatatctatgtttggtagagattttgaagtagacttagtttgtttactgctgacgggaatagatgttattttta 17188840  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaaga 276  Q
    | |||||||| ||||| ||||||||||||  ||| || || |||| ||||| |||||| ||||||||| |||||||    
T  17188839 gaatgaattggttagaatataaccgagttcatatcaactgctttagcaagacggtgcatttttcttctgcggaaga 17188764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 117 - 308
Target Start/End: Original strand, 13318082 - 13318273
Alignment:
Q  117 taaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattaga 216  Q
    |||||||||||||||||||||||||||||||||||||||| ||  | || ||||||| |||| |||| |||||||||||||| ||||||||||| |||||    
T  13318082 taaggtgtccgttgtctatgtttggtagagattttgaggttgatcttgtatgtctaccgttgatgggtatggatgttatttttgggatgaattggttaga 13318181  T
Q  217 gtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    |||||||||||||  |||||||||||||||||||| |||| | ||||||||| ||||||| |||||| ||| |||||| |||||||||||||    
T  13318182 gtataaccgagttcatataaattgttttaacaagacggtgtatttttcttctgcggaagaagagagtggaggagagttcctaactactaaac 13318273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 14290996 - 14291260
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  14290996 ttgtttcattgctgttgattgtgcatataagttgggtctggttatatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 14291095  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || |||||||||||||||||||||||||| ||||| |||||  | || ||| | | ||||| ||| |||||||| ||||| |    
T  14291096 acttctcttgtttgtttgagttgtccgttgtctatgtttggtagagactttgaagtcgatcttgtatgtttgccgttgtcgggtatggatgtgatttttg 14291195  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttct 265  Q
    ||||||| || |||||||||||||  |||  ||| ||||| ||||  |||| |||||| ||||||    
T  14291196 ggatgaactggttagagtataaccatgttcatattaattgctttagtaagacggtgcatttttct 14291260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 28756984 - 28756756
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  28756984 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 28756885  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| || |||||||  | |||||||||||||||||||||| | | || ||||| ||||||| ||||  ||| ||||||||||| || |    
T  28756884 acttctcttgtttgtctacggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctaccgttgacgggtatggatgttatctttg 28756785  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||| ||||| ||||||    
T  28756784 gtatgaattggttagaatataatcgagtt 28756756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 10408633 - 10408412
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  10408633 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 10408534  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| |||||||| ||||| |    
T  10408533 acttctcttgtttgtgtgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgtgatttttg 10408434  T
Q  201 ggatgaattgattagagtataa 222  Q
    | |||||||| |||||||||||    
T  10408433 gtatgaattggttagagtataa 10408412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 12509947 - 12510175
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||  ||| | |||     
T  12509947 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagatttcagcaacc 12510046  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||  ||||||   | |||||||||||||||||||||| ||| || ||||| ||| ||| ||||  ||| |||||||| ||||| |    
T  12510047 acttctctggtttgtttggggtgtcttatatctatgtttggtagagattttgtggttgatttagtttgtttaccgttgacgggtatggatgtgatttttg 12510146  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||||||||||    
T  12510147 gaatgaattggttagagtataaccgagtt 12510175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12857959 - 12858203
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |  |||||||||||||||| |||| || ||||||||||||| || |||| ||||||||||| |||||| |||||||| ||||||    
T  12857959 ttgtttcattgctgtggtttgtgcatataagttggttctggttatatctgatatgaatggagaaacggttgttgaaactccagctaagggttcagtaact 12858058  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| ||||||||||||||||| || ||||| || ||  | || ||| | | |||| |||| |||||||| || || |    
T  12858059 acttctcttgtttgtttgagttgtccattgtctatgtttggtagtgactttgaagttgatcttgtatgtttgccgttgatgggtatggatgtaatctttg 12858158  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgtttta 245  Q
    ||||||| || |||||||||||||| |||  ||| ||||||||||    
T  12858159 ggatgaactggttagagtataaccgtgttcatattaattgtttta 12858203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 47126609 - 47126381
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  | ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  47126609 ttgttttattgctattgaatgtgcttataagttgggtttggatatatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 47126510  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | ||||||||||||||||||||||   | || ||||| ||||| | ||||  ||| |||||||| ||||| |    
T  47126509 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtaattgatttagtttgtctgccgttgacgggtatggatgtgatttttg 47126410  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  47126409 gtatgaattggttagagtataatcgagtt 47126381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13317998 - 13318086
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagg 89  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  13317998 ttgtttcattgctttagaatgtgcatataagttgggcttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagg 13318086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 15230268 - 15230001
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || | ||||||||||||||||||| || | ||   |||||  || |||||||||||||||| |||||| ||||||||  |||||    
T  15230268 ttgtttcattgctgttgattttgcatataagttgggtctggttatgtcaagtatgagtggagaaatggttgttgaaactccagctaagggttcattaact 15230169  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||| ||||||||||||| || ||  | || ||| | | |||   ||| |||||||| || || |    
T  15230168 acttctcttgtttgtttgagttgtccattgtctatgttttgtagagattttgaagttgatcttgtatgtttgccgttaacgggtatggatgtaatctttg 15230069  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| |  |||||||||||||| |||  ||| ||||||||||  |||| ||| || |||||||||    
T  15230068 ggatgaactagttagagtataaccgtgttcatatcaattgttttagtaagacggtacatttttcttct 15230001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 15236136 - 15235869
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || | ||||||||||||||||||| || | ||   |||||  || |||||||||||||||| |||||| ||||||||  |||||    
T  15236136 ttgtttcattgctgttgattttgcatataagttgggtctggttatgtcaagtatgagtggagaaatggttgttgaaactccagctaagggttcattaact 15236037  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||| ||||||||||||| || ||  | || ||| | | |||   ||| |||||||| || || |    
T  15236036 acttctcttgtttgtttgagttgtccattgtctatgttttgtagagattttgaagttgatcttgtatgtttgccgttaacgggtatggatgtaatctttg 15235937  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| |  |||||||||||||| |||  ||| ||||||||||  |||| ||| || |||||||||    
T  15235936 ggatgaactagttagagtataaccgtgttcatatcaattgttttagtaagacggtacatttttcttct 15235869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 20059575 - 20059778
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| |||||| ||||| |  ||||| ||||||||||||||| | |    
T  20059575 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctagtatgtttgaaatgtcctttgtctatgtttggtcgtg 20059674  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  20059675 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 20059774  T
Q  247 caag 250  Q
    ||||    
T  20059775 caag 20059778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 15262235 - 15262133
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| || ||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||||| |||||||    
T  15262235 atatgaatggagagatggttgtcgaaactccagctaatggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttggtcgagattt 15262136  T
Q  151 tga 153  Q
    |||    
T  15262135 tga 15262133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 12889318 - 12889115
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  12889318 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 12889219  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  12889218 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 12889119  T
Q  247 caag 250  Q
    ||||    
T  12889118 caag 12889115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 13255299 - 13255096
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  13255299 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 13255200  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  13255199 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 13255100  T
Q  247 caag 250  Q
    ||||    
T  13255099 caag 13255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 16638382 - 16638179
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  16638382 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 16638283  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  16638282 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 16638183  T
Q  247 caag 250  Q
    ||||    
T  16638182 caag 16638179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 43165284 - 43165081
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  43165284 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 43165185  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  43165184 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 43165085  T
Q  247 caag 250  Q
    ||||    
T  43165084 caag 43165081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 14578933 - 14579035
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| |||||||||| | |||| |||||||| ||||| ||||||||||||| | | |||||    
T  14578933 atatgaatggagagatggttgtcgaaactccagctaagggttcagtaactacttctatagtatgtttaagatgtcctttgtctatgtttgatcgtgattt 14579032  T
Q  151 tga 153  Q
    |||    
T  14579033 tga 14579035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 15065680 - 15065482
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||  |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  15065680 tctgatatgaatggagagatggttgtcgaatctccagctaagggttcggtgactacttctctcgtttgtttgaaatgtcctttgtctatgtttggtcgtg 15065581  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgtttta 245  Q
    |||||||| | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||    
T  15065580 attttgagatggatttagtttgtctacctttgagcggtatggatgtgattcttggtatgaattggttagagtacaaccatgttcatatcaattgtttta 15065482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 17492479 - 17492353
Alignment:
Q  28 taagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccg 127  Q
    ||||||||||||  || | ||||||||||| || || |||||||| |||| |||||| ||| |||| || ||||||| ||| ||||||||||| |||||     
T  17492479 taagttgggtcttgttatgtctgatatgaatggagagatggttgtcgaaactccagcgaagagttcggtgactacttctcttgtgtgtttaagatgtccc 17492380  T
Q  128 ttgtctatgtttggtagagattttgag 154  Q
    |||| |||||||| | | |||||||||    
T  17492379 ttgtttatgtttgatcgtgattttgag 17492353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 48428056 - 48427879
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  48428056 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 48427957  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataacc 224  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||    
T  48427956 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaacc 48427879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 10008209 - 10008006
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  10008209 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgcg 10008110  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||| ||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  10008109 atttcgaaatggatttagtttgtctacctttgagcggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 10008010  T
Q  247 caag 250  Q
    ||||    
T  10008009 caag 10008006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 15013284 - 15013378
Alignment:
Q  52 tatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    |||||| |||||||||||||| ||||  ||||| |||||||| || ||||||| |||||| || || | |||||| ||||| |||||||||||||    
T  15013284 tatgaatggggaaatggttgtcgaaaccccagctaagggttcggtgactacttctctagtatgcttgaagtgtcctttgtcgatgtttggtagag 15013378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 15358692 - 15358586
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  15358692 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 15358593  T
Q  147 attttga 153  Q
    |||||||    
T  15358592 attttga 15358586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 16694773 - 16694667
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| || | |||||| ||||||||||| ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  16694773 tctgatatgaatggagagatggttgtcgagactccagctaagggttctgtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 16694674  T
Q  147 attttga 153  Q
    |||||||    
T  16694673 attttga 16694667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 3688552 - 3688349
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  3688552 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 3688453  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || ||| |||| ||||  |||  ||| ||||||||||     
T  3688452 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttacagtacaaccacgttcttattaattgttttag 3688353  T
Q  247 caag 250  Q
    ||||    
T  3688352 caag 3688349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 10908819 - 10908724
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  10908819 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 10908724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 15345766 - 15345861
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  15345766 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 15345861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 15713577 - 15713672
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  15713577 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 15713672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 24185799 - 24185596
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||| ||||||| |||||| |||||||  || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  24185799 tctgatatgaatggagagatggtcgttgaaactccagctaagggtttggtgactacttctctcgtatgtttgcgttgtcctttgtctatgtttggtcgtg 24185700  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| || ||||| ||||  |||  ||| ||||||||||     
T  24185699 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttggagtacaaccatgttcatattaattgttttag 24185600  T
Q  247 caag 250  Q
    ||||    
T  24185599 caag 24185596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 6603344 - 6603238
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||||||  ||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  6603344 tctgatatgaatggagagatggttgtcaaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 6603245  T
Q  147 attttga 153  Q
    |||||||    
T  6603244 attttga 6603238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 12843628 - 12843730
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || ||| ||||||||| |||||| || ||||| || ||||||| ||| ||||||||||| ||||| |||| |||||||| | | |||||    
T  12843628 atatgaatggagagatgattgttgaaactccagctaatggttcagtgactacttctcttgtgtgtttaagatgtcctttgtttatgtttgatcgtgattt 12843727  T
Q  151 tga 153  Q
    |||    
T  12843728 tga 12843730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 15400038 - 15400144
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| ||||||  ||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  15400038 tctgatatgaatggagagatggttgtcgaaactccagcttagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 15400137  T
Q  147 attttga 153  Q
    |||||||    
T  15400138 attttga 15400144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 15586913 - 15587019
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  15586913 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 15587012  T
Q  147 attttga 153  Q
    |||||||    
T  15587013 attttga 15587019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 16754222 - 16754328
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  |||||  |||||||||||||| | |    
T  16754222 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctctgtctatgtttggtcgtg 16754321  T
Q  147 attttga 153  Q
    |||||||    
T  16754322 attttga 16754328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 53382539 - 53382645
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||| |||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  53382539 tctgatatgaatggagagatgattgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 53382638  T
Q  147 attttga 153  Q
    |||||||    
T  53382639 attttga 53382645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 5422451 - 5422654
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||  | |||||||| || ||||||| ||| || ||||| |  ||||  ||||||||||||||| | |    
T  5422451 tctgatatgaatggagagatggttgtcgaaactccgactaagggttcggtgactacttctctcgtatgtttgaaatgtcttttgtctatgtttggtcgtg 5422550  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  5422551 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 5422650  T
Q  247 caag 250  Q
    ||||    
T  5422651 caag 5422654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 26790934 - 26791029
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  26790934 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 26791029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 14874093 - 14874215
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |   || | ||||||||||||||| | |||||    
T  14874093 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaaagttctttgtctatgtttggtcgtgattt 14874192  T
Q  151 tgaggtcgacttagtgtgtctac 173  Q
    |||| | || ||||| |||||||    
T  14874193 tgagatggatttagtttgtctac 14874215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 14089136 - 14089071
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||| || ||||||||||||||||||  ||| ||||||||||  |||| |||||| |||||||||    
T  14089136 atgaactggttagagtataaccgagttcatatcaattgttttagtaagacggtgcatttttcttct 14089071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 44779710 - 44779645
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||| || ||||||||||||||||||  ||| ||||||||||  |||| |||||| |||||||||    
T  44779710 atgaactggttagagtataaccgagttcatatcaattgttttagtaagacggtgcatttttcttct 44779645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 224; Significance: 1e-123; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 70437 - 70130
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||||||||||| ||||||    
T  70437 ttgtttctttgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggagaaattgttgttgaaactctagccaagggttcagtaact 70338  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||| |    
T  70337 acttctctagtttgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccgttgatgggaatgtatgttatttttg 70238  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| || |||||| ||||||| |||||| |||||||||| |||||    
T  70237 ggatgaattggttagagtataaccgagtttatataaattgtttcaacaagatggtgcatttgtcttctgcggaagaagagagtggagcagagttcctaac 70138  T
Q  301 tactaaac 308  Q
    ||||||||    
T  70137 tactaaac 70130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 2191 - 2499
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||||    
T  2191 ttgtttcattgctattgaatgttcttataagttgggtctggttgtatctgatatgaaaggggatatggttgttgaaactccagctaagggttcagtaact 2290  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| ||| |||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||   |  |||||||||||||| |    
T  2291 acttctcttgtttgtctaagatgttcgttgtctatgtttggtagagactttgaagtcgacttagtttgtttactgttgaccgctatggatgttatttttg 2390  T
Q  201 -ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaa 299  Q
     ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||| | ||||||| |||||| |||| ||||| |||     
T  2391 aggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttttgcggaagaagagagtggagcggagttcctat 2490  T
Q  300 ctactaaac 308  Q
    |||||||||    
T  2491 ctactaaac 2499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 27903421 - 27903114
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||    
T  27903421 ttgtttcattgctttagaatgtgcatataagttgggtctgattatatctgatatgaaaggagaaatggtcgttgaaactccagccaagggttcagtaact 27903322  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||| |    
T  27903321 acttctctagtttgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccgttgatgggaatgaatgttattttag 27903222  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||| |||||||  ||||| |||||||||| |||||    
T  27903221 ggatgaattggttagagtataaccgagtttatataaattgtttcaacaagacggtgcatttttcttctgcggaagaaaagagtggagcagagttcctaac 27903122  T
Q  301 tactaaac 308  Q
    ||||||||    
T  27903121 tactaaac 27903114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 51604028 - 51604310
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| |||||  ||||| ||||||| |||||||||||||| |||||||||||||||| |||||| |||||||| || |||    
T  51604028 ttgtttcattgctttagaatgtgcttataaactgggtttgattgtgtctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtgact 51604127  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || ||||||||  | ||||||||||||||||||||||| || |||||||| ||| | | | ||  |||||||||||||||||| |    
T  51604128 acttctcttgtttgcttgaggtgtccaatttctatgtttggtagagattttgaagtagacttagtttgtttgccgctgacgggaatggatgttatttttg 51604227  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||| ||||||||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||| | ||||| ||||||    
T  51604228 ggatgaattggttagagtataaccgagttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagt 51604310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 15354295 - 15354501
Alignment:
Q  20 tgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaa 119  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||||||| ||| || ||| |||    
T  15354295 tgtgtatataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagctacgggttcagtaactacttctcttgtttgtctaa 15354394  T
Q  120 ggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    | |||| ||||||||||||||||||||| ||| | ||||||||||| ||| ||| ||||  ||| |||||||||||||| |||||||| |||||||||||    
T  15354395 gatgtctgttgtctatgtttggtagagactttaaagtcgacttagtttgtttaccgttgacgggtatggatgttatttttgggatgaactgattagagta 15354494  T
Q  220 taaccga 226  Q
    |||||||    
T  15354495 taaccga 15354501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 20893067 - 20892800
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  20893067 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 20892968  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||  ||| |||  | |||||||||||||||||||||| ||| ||  |||| ||  | | ||||| ||| |||||||||||||| |    
T  20892967 acttctcttgtttgtttggggtatcctatatctatgtttggtagagattttgtggttgatctagtttgcttgccgttgtcgggtatggatgttatttttg 20892868  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | ||||| || ||||||||||||||||||  ||| || || ||||  |||| |||||| |||||||||    
T  20892867 gaatgaactggttagagtataaccgagttcatatcaactgctttagtaagacggtgcatttttcttct 20892800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 4 - 308
Target Start/End: Original strand, 14993606 - 14993910
Alignment:
Q  4 tttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactact 103  Q
    |||||||||| | || ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||| ||||||||  ||||||||    
T  14993606 tttcattgctgttgattgtgcatataagttgggtctagttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcactaactact 14993705  T
Q  104 tttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcggga 203  Q
    | ||| || ||| |||| ||||||||||||||||||||| |||  ||||| |||||| | || ||| ||| ||||  ||| ||| |||| ||||| ||||    
T  14993706 tctcttgtttgtctaagttgtccgttgtctatgtttggtggaggctttgaagtcgaccttgtttgtttaccgttgacgggtatgcatgtgatttttggga 14993805  T
Q  204 tgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactac 303  Q
    |||| || ||||||||||||||||||  ||| ||||| ||||  |||| |||||| ||||||||| |  |||| | |||| |||| || || ||||||||    
T  14993806 tgaactggttagagtataaccgagttcatattaattgctttagtaagacggtgcatttttcttctgctaaagaagtgagtggagctgaattcctaactac 14993905  T
Q  304 taaac 308  Q
    |||||    
T  14993906 taaac 14993910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16150672 - 16150527
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  16150672 ttgtttcattgctattgaatgtgcatataagttgggtttggttgtttctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 16150573  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  16150572 acttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagag 16150527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16154818 - 16154673
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  16154818 ttgtttcattgctattgaatgtgcatataagttgggtttggttgtgtctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 16154719  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  16154718 acttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagag 16154673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3262030 - 3262258
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  3262030 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 3262129  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  3262130 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 3262229  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  3262230 gtatgaattggttagagtataatcgagtt 3262258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 11204468 - 11204696
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||| ||| ||  |||||||| |||||||||||||||||||||||||| |||||| |||||||| |||||     
T  11204468 ttgttttattgctattgaatgtgcctataagttaggtttggatgtatctggtatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 11204567  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||    |||||||||||||||||||||| ||| || ||||| ||||| | ||||| ||| |||||||||||||| |    
T  11204568 acttctcttgtttgtctggggtgtcctaaatctatgtttggtagagattttgtggttgatttagtttgtctgccgttgtcgggtatggatgttatttttg 11204667  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||||||||||    
T  11204668 gaatgaattggttagagtataaccgagtt 11204696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 29450773 - 29450994
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  29450773 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 29450872  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| |||||||| ||||| |    
T  29450873 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgtgatttttg 29450972  T
Q  201 ggatgaattgattagagtataa 222  Q
    | |||||||| |||||||||||    
T  29450973 gtatgaattggttagagtataa 29450994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 15073395 - 15073128
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || |||||| ||||||||| |||| || ||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  15073395 ttgtttcattgctgttgattgtgcacataagttggctctggttatatctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 15073296  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| ||  |||| || ||||| |||||||||||||||||||| ||||| || ||  | || ||||| | ||||  ||| |||||||| || || |    
T  15073295 acttctcttgtcagtttgagttgtcctttgtctatgtttggtagagactttgaagttgatcttgtatgtctgccgttgacgggtatggatgtaatctttg 15073196  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || |||||||||||||| |||  ||| ||||||||||  |||| ||| || |||||||||    
T  15073195 ggatgaactggttagagtataaccgtgttcatattaattgttttagtaagacggtacatttttcttct 15073128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 44659102 - 44659329
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  44659102 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 44659201  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  44659202 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 44659301  T
Q  201 ggatgaattgattagagtataaccgagt 228  Q
    | |||||||| ||||||| ||| |||||    
T  44659302 gtatgaattggttagagtttaatcgagt 44659329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 73 - 308
Target Start/End: Complemental strand, 15258891 - 15258656
Alignment:
Q  73 tgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtcta 172  Q
    ||||| |||||| ||| |||| |||||||||| ||| || ||| ||||||||||||||||||||||||||||||| ||||  |||||| | || ||| ||    
T  15258891 tgaaactccagctaagagttcagtaactacttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgtagtcgaccttgtttgttta 15258792  T
Q  173 ctgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacgg 272  Q
    | ||||  ||| |||||||| |||||  |||||||||| ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| | |    
T  15258791 ccgttgacgggtatggatgtcattttttggatgaattggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgctg 15258692  T
Q  273 aagatgagagtcgagcagagtttctaactactaaac 308  Q
    |||| |||| | |||| ||||| ||| |||||||||    
T  15258691 aagaagagactggagctgagttcctatctactaaac 15258656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 53750706 - 53750809
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| |||||  ||||| ||||||| |||||||||||||| |||||||||||||||| |||||| |||||||| || |||    
T  53750706 ttgtttcattgctttagaatgtgcttataaactgggtttgattgtgtctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtgact 53750805  T
Q  101 actt 104  Q
    ||||    
T  53750806 actt 53750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 14162460 - 14162257
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| |||||||||| ||| ||||||||||||||||| |||||||||| || | | |    
T  14162460 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtaactacttctcttgtgtgtttaaggtgtcctttgtctatgtatgatcgtg 14162361  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| ||| |||  |||   ||||||||||| ||| | || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  14162360 attttgaaatggatttagtttgtttacctttgagtggaatggatgtgattcttggcatgaactggttagagtacaaccatgttcttattaattgttttag 14162261  T
Q  247 caag 250  Q
    ||||    
T  14162260 caag 14162257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 18224468 - 18224645
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  18224468 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 18224567  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataacc 224  Q
    |||||||  | || ||||| |||||||  |||   || |||||||||||||| || |||||||| |||||||| ||||    
T  18224568 attttgaaatggatttagtttgtctacctttgagcggtatggatgttattttgggtatgaattggttagagtacaacc 18224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 15266812 - 15266736
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaa 77  Q
    ||||||||||| | | || ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  15266812 ttgtttcattgatgttgattgtgcttataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaa 15266736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 14697087 - 14696985
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||| ||||| ||||| ||||||||||||||| |||||||    
T  14697087 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgcttaagatgtcccttgtctatgtttggtcgagattt 14696988  T
Q  151 tga 153  Q
    |||    
T  14696987 tga 14696985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 16038 - 16150
Alignment:
Q  28 taagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccg 127  Q
    |||||||||||| | | | ||| ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| |||||     
T  16038 taagttgggtcttactatgtctaatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcct 16137  T
Q  128 ttgtctatgtttg 140  Q
    |||||||||||||    
T  16138 ttgtctatgtttg 16150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 12479590 - 12479387
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  12479590 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 12479491  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  12479490 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 12479391  T
Q  247 caag 250  Q
    ||||    
T  12479390 caag 12479387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 16234014 - 16234217
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  16234014 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 16234113  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  16234114 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 16234213  T
Q  247 caag 250  Q
    ||||    
T  16234214 caag 16234217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 17092171 - 17092374
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  17092171 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 17092270  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  17092271 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 17092370  T
Q  247 caag 250  Q
    ||||    
T  17092371 caag 17092374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 8389402 - 8389199
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || |||||||  || || ||||| |  ||||| ||||||||||||||| | |    
T  8389402 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttcactcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 8389303  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  8389302 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggaatgaactggttagagtacaaccacgttcttattaattgttttag 8389203  T
Q  247 caag 250  Q
    ||||    
T  8389202 caag 8389199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 16250872 - 16251075
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  16250872 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 16250971  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || || ||||| |||||||| ||||  |||  ||| ||||||||||     
T  16250972 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtataaattggttagagtacaaccatgttcatatcaattgttttag 16251071  T
Q  247 caag 250  Q
    ||||    
T  16251072 caag 16251075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 14683557 - 14683451
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||| ||||||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  14683557 tctgatatgaatggagagatggtcgttgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgttgtcctttgtctatgtttggtcgtg 14683458  T
Q  147 attttga 153  Q
    |||||||    
T  14683457 attttga 14683451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 16219181 - 16219114
Alignment:
Q  86 aagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    ||||||||  ||||||||| ||| ||||||||||| ||||| ||||||||||||||| | ||||||||    
T  16219181 aagggttcaataactacttctcttgtgtgtttaagatgtcctttgtctatgtttggtcgtgattttga 16219114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 16222501 - 16222434
Alignment:
Q  86 aagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    ||||||||  ||||||||| ||| ||||||||||| ||||| ||||||||||||||| | ||||||||    
T  16222501 aagggttcaataactacttctcttgtgtgtttaagatgtcctttgtctatgtttggtcgtgattttga 16222434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 19635126 - 19634923
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||| ||| | |    
T  19635126 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgttcggtcgtg 19635027  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  19635026 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaactggttagagtacaaccacgttcttattaattgttttag 19634927  T
Q  247 caag 250  Q
    ||||    
T  19634926 caag 19634923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 23958737 - 23958642
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  23958737 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 23958642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 15144914 - 15145020
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||| | ||| || ||||| |  ||||| ||||||||||||||| | |    
T  15144914 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacgtctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 15145013  T
Q  147 attttga 153  Q
    |||||||    
T  15145014 attttga 15145020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 40476030 - 40475924
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||| || |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  40476030 tctgatatgaatggagagatggtggtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 40475931  T
Q  147 attttga 153  Q
    |||||||    
T  40475930 attttga 40475924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 8050645 - 8050740
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  | ||| |||||||||||||||    
T  8050645 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatttcctttgtctatgtttggt 8050740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 14301001 - 14301096
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||| ||||||    
T  14301001 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatatttggt 14301096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 19775815 - 19776018
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| |||  | ||||| |  ||||| ||||||||||||||| | |    
T  19775815 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcatatgtttgaaatgtcctttgtctatgtttggtcgtg 19775914  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||| ||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  19775915 atttcgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 19776014  T
Q  247 caag 250  Q
    ||||    
T  19776015 caag 19776018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 94133 - 94440
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  94133 ttgtttcattgctttagaatgtgcatataagttgggtctgcttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 94232  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  94233 acttctctggtgtgtctaaggtgtccgttgtctatgtttggtagagattttgaagtcgatttagtgtgtctaccgttgttggggatggatgttattttcg 94332  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    |||||||||| ||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||  |||||| |||||| | ||||||||||||||    
T  94333 ggatgaattggttagaatataaccgagtctgtattaattgttttaacaagacggtgcacttttcttctgtggaagaagagagtggggcagagtttctaac 94432  T
Q  301 tactaaac 308  Q
    ||||||||    
T  94433 tactaaac 94440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 115627 - 115345
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||| |||||||||||  | ||| |||||||||||||||||||||| |||||||| ||||||| |||||| |||||||| || |||    
T  115627 ttgtttcattgctttagagtgtgcatataaactaggtttgattgtatctgatatgaaaggagaaatggtcgttgaaactccagctaagggttcagtgact 115528  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| |  |||||  | |||||||||||||| |||||||| || || ||||| ||  |||   ||  ||| ||||||||||| || |    
T  115527 acttctcttgtttgtttgatatgtcctatatctatgtttggtagggattttgaagtagatttagtttgcttaccactgacggggatggatgttatatttg 115428  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||| ||||||||||||||||||  ||| || || || |||||||  ||||| ||||||||| | ||||| ||||||    
T  115427 ggatgaattggttagagtataaccgagttcatatcaactgcttcaacaagaccgtgcatttttcttctgccgaagaagagagt 115345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 8e-95; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 13676477 - 13676170
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  13676477 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 13676378  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||  |||||||||||||||||| |    
T  13676377 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtgtgtttaccgttgacgggaatggatgttatttttg 13676278  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| ||||||| |||||| |||||||||| || ||    
T  13676277 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctgac 13676178  T
Q  301 tactaaac 308  Q
    ||||||||    
T  13676177 tactaaac 13676170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 11385652 - 11385919
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||| |||||||| | ||||    
T  11385652 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatttgatatgaaaggagagatggttgttgaaactccagctaagggttcaggaact 11385751  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  |||||||||||||||||| |    
T  11385752 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggatgttatttttg 11385851  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  ||| || || |||| ||||| |||||| |||||||||    
T  11385852 ggatgaattggttagagtataaccgagttaatatcaactgctttagcaagacggtgcatttttcttct 11385919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 15099826 - 15100133
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  15099826 ttgtttcattgctgttgattgtgcatataagttgggtctagttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 15099925  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||| ||||||||||||||||||||| ||||| |||||| |||| ||| ||| ||||  ||| |||||||| ||||| |    
T  15099926 acttctcttgtttgtctaaggtgtctgttgtctatgtttggtagagactttgaagtcgacctagtttgtttaccgttgacgggtatggatgtgatttttg 15100025  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| |  ||||||||||||||||||  ||| ||||| |||||||||| |||||| ||||||||| | ||||| |||||| |||| ||||| ||| |    
T  15100026 ggatgaactagttagagtataaccgagttcatatcaattgctttaacaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctatc 15100125  T
Q  301 tactaaac 308  Q
    ||||||||    
T  15100126 tactaaac 15100133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 14283597 - 14283825
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| || |||||||||||| ||||||    
T  14283597 ttgtttcattgctattgaatgtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactctagccaagggttcagtaact 14283696  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  |||||||||||||||||| |    
T  14283697 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggatgttatttttg 14283796  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    |||||||||| ||||||||||||||||||    
T  14283797 ggatgaattggttagagtataaccgagtt 14283825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 13024371 - 13024104
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| |||| |||||||||||| ||  |||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  13024371 ttgtttcattgctttagaaagtgcttataagttgggtttggatgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 13024272  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| || || |||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||  ||| |||||||||||||| |    
T  13024271 acttctctagtttgcttgaggtgtccgttgtctatgtttggtagggattttttggtcgacttagtgtgtctaccgttgacgggtatggatgttatttttg 13024172  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||| ||||||  ||| || || ||||  |||| |||||| |||||||||    
T  13024171 gtatgaattggttagagtataatcgagttcatatcaactgctttagtaagacggtgcatttttcttct 13024104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 14140705 - 14140438
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  14140705 ttgtttcattgctttagaaagtgcatataagttgggtttgagtgtatctgatatgaagggagaaatggttgttgaaactccagctaagggttcagtaact 14140606  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  |||||||||||||||||| |    
T  14140605 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtctgtttgccgttgacgggaatggatgttatttttg 14140506  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || ||||||||||||||||||  ||| || |||||||  |||| ||| || |||||||||    
T  14140505 ggatgaaatggttagagtataaccgagttcatatcaactgttttagtaagacggtacatttttcttct 14140438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 18051176 - 18051458
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||| || |||||||||||||||| |||||| |||||||| || |||    
T  18051176 ttgtttcattgctttagaaagtgcatataggttgggtttgattgtgtctgatatgaagggagaaatggttgttgaaactccagctaagggttcagtgact 18051275  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || ||||||||  | ||||||||||||||||||||||| || || ||||||||| ||| ||||  ||| |||||||||||||| |    
T  18051276 acttctctggtttgcttgaggtgtccaatttctatgtttggtagagattttgaagtagatttagtgtgtttaccgttgacggggatggatgttatttttg 18051375  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||| ||||||||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||| | ||||| ||||||    
T  18051376 ggatgaattggttagagtataaccgagttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagt 18051458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 12459654 - 12459387
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  12459654 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 12459555  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||||||||||||||| ||||||||||||||||| |||| ||| || ||||| ||| ||| ||||  ||| |||||||||||||| |    
T  12459554 acttctcttgtctgtttaaggtgtccgttatctatgtttggtagagactttgtggttgatttagtttgtttaccgttgacgggtatggatgttatttttg 12459455  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| |||||||||||||| |||  ||| || || ||||  |||| |||||| |||||||||    
T  12459454 gaatgaattggttagagtataaccgggttcatatcaactgctttagtaagacggtgcatttttcttct 12459387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 15343457 - 15343190
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||||   ||||||    
T  15343457 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggtaaagtaact 15343358  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  |||||||||  ||||||| |    
T  15343357 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggacattatttttg 15343258  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| |||||||||||| |||||  ||| ||||| ||||  |||| ||| || |||||||||    
T  15343257 gaatgaattggttagagtataacagagttcatatcaattgctttagtaagacggtacatttttcttct 15343190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 16947695 - 16947962
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| ||  |||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  16947695 ttgtttcattgctattgaatgtgcttataagttgggtttggatgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 16947794  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| || || || ||||| |||||||||||||||||||| ||||  ||||||||||| ||  | | ||||  ||| |||||||||||||| |    
T  16947795 acttctctagtttgcttgagatgtccattgtctatgtttggtagagactttgtagtcgacttagtttgcttgccgttgacgggtatggatgttatttttg 16947894  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| |||||||||    
T  16947895 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttct 16947962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 12798724 - 12799031
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||| || ||| |||||||| ||||||    
T  12798724 ttgtttcattgttgttgattgtgcatataagttgggtctggttgtatctgatatgaaaggaaaaatggttgttgaaactcaagctaagggttcagtaact 12798823  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||  | ||| |||| |||| ||||||||||||||||||||| ||||| |||||  |||| ||| | | ||||  ||| |||||||| ||||| |    
T  12798824 acttctcttatttgtctaagttgtctgttgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttgacgggtatggatgtaatttttg 12798923  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || |||||||||||||| |||  ||| ||||| |||   |||| |||||| ||||||||| | ||||| |||||| |||  ||||| |||||    
T  12798924 ggatgaactggttagagtataaccgtgttcatattaattgctttggtaagacggtgcatttttcttctgctgaagaagagagtggagttgagttcctaac 12799023  T
Q  301 tactaaac 308  Q
    ||| ||||    
T  12799024 tacgaaac 12799031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21755438 - 21755210
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||     
T  21755438 ttgttttattgctattgaatgtgcttataagttgggtttggatgtatctgatatggaaggggaaatggttgttgaaactccagctaagggttcagtaacc 21755339  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| | ||||||||  | |||||||||||||||||||| | ||| || ||||| ||||| | ||||| ||| |||||||| ||||| |    
T  21755338 acttctcttgtttgtctgaggtgtcctatatctatgtttggtagagatttcgtggttgatttagtttgtctgccgttgtcgggtatggatgtgatttttg 21755239  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    |||||||||| ||||||||||||||||||    
T  21755238 ggatgaattggttagagtataaccgagtt 21755210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 14261469 - 14261735
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || || |||||||||||||||||| |||||||||||||||| || |||||||||||||||| |||||| |||||||  ||||||    
T  14261469 ttgtttcattgttgttgattgagcatataagttgggtctggttgtatctgatatgaatggagaaatggttgttgaaactccagctaagggtttagtaact 14261568  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| ||||||||||||||||||||  |||| |||||  |||| ||||| | ||||| ||| |||||||| ||||| |    
T  14261569 acttctcttgtttgtttgagttgtccattgtctatgtttggtagaga-attgaagtcgatctagtatgtctgccgttgtcgggtatggatgtgatttttg 14261667  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || ||||||||||||||  ||  ||| ||||| ||||  |||| |||||| |||||||||    
T  14261668 ggatgaactggttagagtataaccgtattcatattaattgctttagtaagacggtgcatttttcttct 14261735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 26092021 - 26092249
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  26092021 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 26092120  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  26092121 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 26092220  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  26092221 gtatgaattggttagagtataatcgagtt 26092249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 19150037 - 19149755
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  19150037 ttgtttcattgttgttgattgtgcatataagttaggtctggttgtatctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 19149938  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||| ||||| ||| |  |||| ||| | |  |||  ||| |||||||| ||||| |    
T  19149937 acttctcttgtttgtttgagttgtccattgtctatgtttggtagagactttgaagtcaatctagtatgtttgcctttgacgggtatggatgtaatttttg 19149838  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    ||||||| || |||||||||||||| |||  ||| ||||| ||||  |||| | | || ||||||||| | ||||| ||||||    
T  19149837 ggatgaactggttagagtataaccgtgttcatattaattgctttagtaagacgatacatttttcttctgctgaagaagagagt 19149755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 20749436 - 20749154
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  20749436 ttgtttcattgttgttgattgtgcatataagttaggtctggttgtatctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 20749337  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||| ||||| ||| |  |||| ||| | |  |||  ||| |||||||| ||||| |    
T  20749336 acttctcttgtttgtttgagttgtccattgtctatgtttggtagagactttgaagtcaatctagtatgtttgcctttgacgggtatggatgtaatttttg 20749237  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    ||||||| || |||||||||||||| |||  ||| ||||| ||||  |||| | | || ||||||||| | ||||| ||||||    
T  20749236 ggatgaactggttagagtataaccgtgttcatattaattgctttagtaagacgatacatttttcttctgctgaagaagagagt 20749154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 13965891 - 13966160
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||     
T  13965891 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcaataacc 13965990  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| ||| || ||||| ||||| | ||||| ||| |||||||||||||| |    
T  13965991 acttctcttgtttgtctggggtgtcctatatctatgtttggtagagattttgtggttgatttagtttgtctgccgttgtcgggtatggatgttatttttg 13966090  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctac 270  Q
    | |||||||  ||||| ||||| ||||||  ||| || || | ||  |||| |||||| |||||||||||    
T  13966091 gaatgaattagttagaatataatcgagttcatatcaactgctatagtaagacggtgcatttttcttctac 13966160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26115813 - 26116040
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  26115813 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 26115912  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  26115913 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 26116012  T
Q  201 ggatgaattgattagagtataaccgagt 228  Q
    | |||||||| ||||||| ||| |||||    
T  26116013 gtatgaattggttagagtttaatcgagt 26116040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 49155327 - 49155099
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  49155327 ttgttttattgctattgaatgtgcatataagttgggtttggatatatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 49155228  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || || || || || | ||||  ||| |||||||||||||| |    
T  49155227 acttctcttgtttgtctgcggtgtcccatatctatgtttggtagagattttgtgattgatttggtttgcctgccgttgacgggtatggatgttatttttg 49155128  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  49155127 gtatgaattggttagagtataatcgagtt 49155099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 40925040 - 40925268
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  | ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  40925040 ttgttttattgctattgaatgtgcttataagttgggtttggatatatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 40925139  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | || ||||||||||| ||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  40925140 acttctcttgtttgtctgcggtgtcccatatccatgtttggtagggattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 40925239  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||| ||||| ||||||    
T  40925240 gtatgaattggttagaatataatcgagtt 40925268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12204023 - 12204267
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| || | ||   |||||  || |||||||||||||||| || ||| ||||||||  |||||    
T  12204023 ttgtttcattgttgttgattgtgcatataagttgggtctggttatgtcaagtatgagtggagaaatggttgttgaaactctagctaagggttcaataact 12204122  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||||||||| |  ||  | |||||| | |||||   ||| |||||||| || || |    
T  12204123 acttctcttgtttgtttgagttgtccattgtctatgtttggtagagattttgaagatgatcttgtgtgtttgctgttaacgggtatggatgtaatctttg 12204222  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgtttta 245  Q
    ||||||| || |||||||||||||| |||  ||| ||||||||||    
T  12204223 ggatgaactggttagagtataaccgtgttcatatcaattgtttta 12204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 44788640 - 44788845
Alignment:
Q  45 tatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtag 144  Q
    ||||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| |    
T  44788640 tatctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcg 44788739  T
Q  145 agattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgtttt 244  Q
     ||||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| |||||||||    
T  44788740 tgattttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgtttt 44788839  T
Q  245 aacaag 250  Q
    | ||||    
T  44788840 agcaag 44788845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 8201027 - 8200824
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  8201027 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 8200928  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  8200927 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 8200828  T
Q  247 caag 250  Q
    ||||    
T  8200827 caag 8200824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 14335375 - 14335172
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  14335375 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 14335276  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  14335275 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 14335176  T
Q  247 caag 250  Q
    ||||    
T  14335175 caag 14335172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 14957533 - 14957330
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||| ||||||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  14957533 tctgatatgaatggagagatggtcgttgaaactccagctaagggttcagtgactacttctctcgtatgtttgcgttgtcctttgtctatgtttggtcgtg 14957434  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || |||||||| || ||||| ||||  |||  ||| ||||||||||     
T  14957433 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattttgggtatgaattggttggagtacaaccatgttcatattaattgttttag 14957334  T
Q  247 caag 250  Q
    ||||    
T  14957333 caag 14957330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 308
Target Start/End: Original strand, 16069704 - 16069827
Alignment:
Q  185 atggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtc 284  Q
    ||||||||  |||| ||||||||||| |||||||||||| |||||  ||| ||||| ||||  |||| |||||| ||||||||| | ||||| ||||||     
T  16069704 atggatgtagtttttgggatgaattggttagagtataactgagttcatattaattgctttagtaagacggtgcatttttcttctgctgaagaagagagtg 16069803  T
Q  285 gagcagagtttctaactactaaac 308  Q
    |||| ||||| ||||||| |||||    
T  16069804 gagctgagttcctaactaataaac 16069827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 306
Target Start/End: Complemental strand, 15627498 - 15627244
Alignment:
Q  52 tatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagatttt 151  Q
    |||||| | |||||||||| | |||| |||||| |||||||| || ||||||| | |||||||| |||||||| | ||| | ||||||||| |||| |||    
T  15627498 tatgaatgaggaaatggttttcgaaactccagctaagggttcggtgactacttctttagtgtgtctaaggtgttctttgccgatgtttggtcgagacttt 15627399  T
Q  152 gaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaacaaga 251  Q
    ||  | || ||||| ||| | |  |||   ||||||||||| ||  | || ||||| || || ||||||||||  |||  ||| ||||||||||| |||     
T  15627398 gaaattgatttagtttgtttgcatttgagtggaatggatgtaatccttggtatgaactggttggagtataaccatgttcatattaattgttttaataagt 15627299  T
Q  252 tggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaa 306  Q
     |||| | ||||||||| ||||||| |||||| |||| |||||  ||||||||||    
T  15627298 cggtgtatttttcttctgcggaagaagagagtggagcggagttcttaactactaa 15627244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 18180724 - 18180616
Alignment:
Q  45 tatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtag 144  Q
    ||||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| |    
T  18180724 tatctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtatgtttgaaatgtcctttgtctatgtttggtcg 18180625  T
Q  145 agattttga 153  Q
     ||||||||    
T  18180624 tgattttga 18180616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 11550393 - 11550596
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  11550393 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgttgtcctttgtctatgtttggtcgtg 11550492  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| || ||||| ||||  |||  ||| ||||||||||     
T  11550493 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttggagtacaaccatgttcatattaattgttttag 11550592  T
Q  247 caag 250  Q
    ||||    
T  11550593 caag 11550596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 9591343 - 9591237
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| || |||||||||||| | |    
T  9591343 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttatctatgtttggtcgtg 9591244  T
Q  147 attttga 153  Q
    |||||||    
T  9591243 attttga 9591237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 250
Target Start/End: Complemental strand, 10873651 - 10873466
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttag 164  Q
    |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | ||||||||  | || ||||    
T  10873651 atggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgattttgaaatggatttag 10873552  T
Q  165 tgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaacaag 250  Q
    | |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| |||||||||| ||||    
T  10873551 tttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttagcaag 10873466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 8710584 - 8710489
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  8710584 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 8710489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 11234504 - 11234599
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  11234504 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 11234599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 13689020 - 13688925
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  13689020 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 13688925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 17703746 - 17703949
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||  |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  17703746 tctgatatgaatggagagatggttgtcgaaactccagttaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 17703845  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| ||||| || ||||  |||  ||| ||||||||||     
T  17703846 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattctgggtatgaattggttagaatacaaccatgttcatatcaattgttttag 17703945  T
Q  247 caag 250  Q
    ||||    
T  17703946 caag 17703949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 18587462 - 18587557
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  18587462 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 18587557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 12690463 - 12690375
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    ||||| ||||||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | ||||||||    
T  12690463 atggtcgttgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgttgtcctttgtctatgtttggtcgtgattttga 12690375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 14042656 - 14042581
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    |||||||| |||| || ||| ||||||| ||| ||||||| ||| ||||||| ||| ||||| |||||||||||||    
T  14042656 atggttgtcgaaactcaagctaagggttttgtgactacttctcttgtgtgttcaagatgtcctttgtctatgtttg 14042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 14352686 - 14352611
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    |||||||| |||| || ||| ||||||| ||| ||||||| ||| ||||||| ||| ||||| |||||||||||||    
T  14352686 atggttgtcgaaactcaagctaagggttttgtgactacttctcttgtgtgttcaagatgtcctttgtctatgtttg 14352611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 15158348 - 15158443
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| ||| || |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  15158348 tctgatatgaatggagagatggttgtcgaaactccggctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 15158443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 19615499 - 19615434
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||| || ||||||||||||||||||  ||| ||||||||||  |||| |||||| |||||||||    
T  19615499 atgaactggttagagtataaccgagttcatatcaattgttttagtaagacggtgcatttttcttct 19615434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 10011 - 10318
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  10011 ttgtttcattgctattgaatttgcttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 10110  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| ||| |||| |||||||||||||||||| ||||||| ||||| ||||||||||| ||| ||| ||||  ||| |||||||||||||| |    
T  10111 acttctctagtttgtctaagatgtccgttgtctatgtttagtagagactttgaagtcgacttagtttgtttaccgttgacgggtatggatgttatttttg 10210  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||| | ||||||| |||||| |||||||||| |||||    
T  10211 ggatgaactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttttgcggaagaagagagtggagcagagttcctaac 10310  T
Q  301 tactaaac 308  Q
    ||||||||    
T  10311 tactaaac 10318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 24234 - 24323
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||| |||| || ||||| |||||||||||||    
T  24234 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgcgtttgagatgtcctttgtctatgtttg 24323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 168; Significance: 5e-90; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 44666 - 44973
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | |||||||| ||||||    
T  44666 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccaactaagggttcagtaact 44765  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||   || |||||||||||||| |    
T  44766 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacaggtatggatgttatttttg 44865  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| |  ||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||||||||||| |||||| |||||||||| |||||    
T  44866 ggatgaactagttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctacggaagaagagagtggagcagagttcctaac 44965  T
Q  301 tactaaac 308  Q
    ||| ||||    
T  44966 tacgaaac 44973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 39572 - 39800
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  39572 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 39671  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  39672 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 39771  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||| ||||||    
T  39772 gtatgaattggttagagtataatcgagtt 39800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 14443 - 14240
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    |||| |||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || | |||  | ||||| ||||||||||||||| | |    
T  14443 tctggtatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatttttgcgatgtcctttgtctatgtttggtcgtg 14344  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  14343 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 14244  T
Q  247 caag 250  Q
    ||||    
T  14243 caag 14240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 325772 - 325465
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  325772 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 325673  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| |||| ||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||  |||||||||||||||||| |    
T  325672 acttctcttgtttgtctaagatgtctgttgtctatgtttggtagagactttgaagtcgacttagtgtgtttaccgttgacgggaatggatgttatttttg 325573  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| |||| |||||  |||| |||||| ||||||||| ||||||| |||||| ||||||| || |||||    
T  325572 ggatgaactggttagagtataaccgagttcatatcaattattttagaaagacggtgcatttttcttctgcggaagaagagagtggagcagaattcctaac 325473  T
Q  301 tactaaac 308  Q
    ||||||||    
T  325472 tactaaac 325465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 200707 - 200989
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| || | ||   |||||  || |||||||||||||||| |||||| |||||||| ||||||    
T  200707 ttgtttcattgttgttgattgtgcatataagttgggtctggttatgtcaagtatgagtggagaaatggttgttgaaactccagctaagggttcagtaact 200806  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| |  |||| ||||||||||||||||||||||||||| || ||  |||| ||| | | ||||  ||| |||||||| || || |    
T  200807 acttctctcgtttgtttgatttgtctgttgtctatgtttggtagagattttgaagttgatctagtatgtttgccgttgacgggtatggatgtaatctttg 200906  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    ||||||| || || ||||||||||  |||  ||| ||||||||||  |||| |||||| ||||||||| |||| || ||||||    
T  200907 ggatgaactggttggagtataaccatgttcatatcaattgttttagtaagacggtgcatttttcttctgcggaggaagagagt 200989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 5088 - 5370
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  5088 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtaact 5187  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  ||| |||||||||||||| |    
T  5188 acttctcttgtctctttaaggtgtccgttgtctatgtttggtagagattttgtggtcgacttagtgtgtctaccgttgacgggtatggatgttatttttg 5287  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    | |||||||| ||||||||||||||||||  ||| | ||| ||||  |||| |||||| ||||||||| | ||||| ||||||    
T  5288 gaatgaattggttagagtataaccgagttcatatcagttgctttagtaagacggtgcatttttcttctgctgaagaagagagt 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 17723 - 17990
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  17723 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggttcagtaact 17822  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||||||| ||| |||| ||||||||||||||||||||| |||||||||||||||||||| ||||  ||| |||||||||||||| |    
T  17823 acttctcttgtctgtttaaggagtcagttgactatgtttggtagagattttgtggtcgacttagtgtgtctaccgttgacgggtatggatgttatttttg 17922  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | || ||||| ||||||||||| | ||||  ||| || || ||||  |||| |||||| |||||||||    
T  17923 gaataaattggttagagtataatcaagttcatatcaactgctttagtaagacggtgcatttttcttct 17990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 7103 - 6796
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  7103 ttgtttcattgctattgaatgtgcttataagttgggtttggttgtttctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 7004  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||||  |||||||||||||||||| |    
T  7003 acttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagagactttaaagtcgacttagtgtgtttaccgttgacgggaatggatgttatttttg 6904  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||| | ||||||| |||||| ||  |||||| ||| |    
T  6903 ggatgaactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttttgcggaagaagagagtggaatagagttcctatc 6804  T
Q  301 tactaaac 308  Q
    ||||||||    
T  6803 tactaaac 6796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 156; Significance: 7e-83; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 98822 - 99129
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||| || | |||||||| ||||||||||||||| |||||||| ||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  98822 ttgtttcattactattgaatgtgcttataagttgggtctggttgtatctaatatgaagggagaaatggttgttgaaactccagctaagggttcagtaact 98921  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| |||||||| |||||||||||||||||||||| ||||| ||||||||||| ||| | | ||||  ||| |||||||||||||| |    
T  98922 acttctcttgtgtgtctaaggtgttcgttgtctatgtttggtagagactttgaagtcgacttagtttgtttgccgttgacgggtatggatgttatttttg 99021  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||| ||||||| |||||| ||||||| || |||||    
T  99022 ggatgaactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagaattcctaac 99121  T
Q  301 tactaaac 308  Q
    ||||||||    
T  99122 tactaaac 99129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 176053 - 175809
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || ||||||||||||| || |||||||||||||||| |||||| ||||||||  |||||    
T  176053 ttgtttcattgctgttgattgtgcatataagttgggtctggttatatctgatatgaatggagaaatggttgttgaaactccagctaagggttcactaact 175954  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||||||||| |||||  | || ||| | | ||||  ||| |||||||| || || |    
T  175953 acttctcttgtttgtttgagttgtccattgtctatgtttggtagagattttgaagtcgatcttgtatgtttgccgttgacgggtatggatgtaatctttg 175854  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgtttta 245  Q
    ||||||| || |||||| |||| || |||  ||| ||||||||||    
T  175853 ggatgaactggttagagaataatcgtgttcatatcaattgtttta 175809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 40123 - 39857
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||    
T  40123 ttgttttattgctttagaaagtgcatataagttggggttgattgtatctgatatgaaaggagaaatggttgttgaaactccagccaagggtttagtaact 40024  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||   || |||||||||| ||| |    
T  40023 acttctcttgtctgtttaaggtgtccgttgtctatgtttggtagagattttgtggtcgacttagtgtgtctaccgttgacaggtatggatgttagttttg 39924  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttc 267  Q
    | |||||||| ||||||||||||||||||  ||||||||| ||||  |||| |||||| ||||||||    
T  39923 gaatgaattggttagagtataaccgagttcatataaattgctttagtaagacggtgcatttttcttc 39857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 17635 - 17740
Alignment:
Q  48 ctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagaga 147  Q
    |||||||||| || ||||||||||| |||| |||||| ||||| ||  | ||||||| ||| ||||||||||| ||||| ||||||||||||| | | ||    
T  17635 ctgatatgaatggagaaatggttgtcgaaactccagctaagggctcgctgactacttctcttgtgtgtttaagatgtcc-ttgtctatgtttgatcgtga 17733  T
Q  148 ttttgag 154  Q
    |||||||    
T  17734 ttttgag 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 648 - 355
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | |||||||| ||||||    
T  648 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccatctaagggttcagtaact 549  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||   || |||||||||||||| |    
T  548 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacaggtatggatgttatttttg 449  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtt 294  Q
    ||||||| || |||||||||||||| |||  ||| ||||| |||| ||||| |||||| ||||||||| ||||||| |||||| ||||||||||    
T  448 ggatgaactggttagagtataaccgggttcatatcaattgctttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagtt 355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 1e-81; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 23274260 - 23273995
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  23274260 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 23274161  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  |||||||||||||||||| |    
T  23274160 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggaatggatgttatttttg 23274061  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttctt 266  Q
    ||||| | || ||||||||||||||||||  ||| |||||||||| ||||| |||||| |||||||    
T  23274060 ggatggactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttctt 23273995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 23097794 - 23098061
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||| |||||||| || ||||||||||||| |||||| |||||||| ||||||    
T  23097794 ttgtttcattgctttagaatgtgcatttaagttgggtctggttgtaactgacatgaaaggagagatggttgttgaaactccagctaagggttcagtaact 23097893  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||||| ||||| |    
T  23097894 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgtggtcgacttagtgtgtctaccgttgatgggtatggatgtcatttttg 23097993  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | ||||| ||  ||||||||||||| |||  ||| |||||||||| ||||| |||||| |||||||||    
T  23097994 gaatgaactgggtagagtataaccgtgttcatatcaattgttttagcaagacggtgcatttttcttct 23098061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 12577020 - 12576738
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| |||||  ||||| ||||||| |||||||||||||| |||||||||||||||| |||||| ||||||||  | |||    
T  12577020 ttgtttcattgctttagaatgtgcctataaactgggtttgattgtgtctgatatgaaaggagaaatggttgttgaaactccagctaagggttcaatgact 12576921  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || ||||||||  | ||||||||||||||||||||||| || |||||||||||| ||| ||||  ||| |||||||||||||| |    
T  12576920 acttctctggtttgcttgaggtgtccaatttctatgtttggtagagattttgaagtagacttagtgtgtttaccgttgacggggatggatgttatttttg 12576821  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||| ||||||||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||| | ||||| ||||||    
T  12576820 ggatgaattggttagagtataaccgagttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagt 12576738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 19716793 - 19717056
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| |  ||||||||||| ||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  19716793 ttgtttcattgctattgaatgtgcttataagttgggtttagttgtatctgatttgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 19716892  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || || ||||| |||||||||||||||||||| ||||| ||||||||||| ||| | | ||||  ||| |||||||||||||| |    
T  19716893 acttctcttgtttgcttgagatgtccattgtctatgtttggtagagactttgaagtcgacttagtttgtttgccgttgacgggtatggatgttatttttg 19716992  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttc 264  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| |||||    
T  19716993 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttc 19717056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 117 - 294
Target Start/End: Complemental strand, 23279327 - 23279150
Alignment:
Q  117 taaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattaga 216  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  |||||||||||||||||| |||||| | || |||||    
T  23279327 taaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggaatggatgttatttttgggatggactggttaga 23279228  T
Q  217 gtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtt 294  Q
    |||||||||||||  ||| |||||||||| ||||| |||||| ||||||||||||||||| || ||| ||||||||||    
T  23279227 gtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctacggaagaagaaagtggagcagagtt 23279150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 20848256 - 20848067
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  20848256 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 20848157  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggat 190  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | |||| |||| ||||||    
T  20848156 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgatgggtatggat 20848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23113390 - 23113146
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||| ||||||||| || | ||   |||||  || |||||||||||||||| |||| | |||||||| ||||||    
T  23113390 ttgtttcattgttgttgattgtgcatataaattgggtctggttatgtcaagtatgagtggagaaatggttgttgaaactccaactaagggttcagtaact 23113291  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||||||||| || ||  |||| ||| | | ||||  ||| |||||||| || || |    
T  23113290 acttctctcgtttgtttgagttgtccattgtctatgtttggtagagattttgaagttgatctagtatgtttgccgttgacgggtatggatgtaatctttg 23113191  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgtttta 245  Q
    ||||||| || |||||||||||||| |||| ||||||||||||||    
T  23113190 ggatgaactggttagagtataaccgtgtttatataaattgtttta 23113146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 24817666 - 24817769
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| |||||||||| |||| ||||| || ||||||||||||||||||||    
T  24817666 atatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctctagtgtgtctaagatgtcctttatctatgtttggtagagattt 24817765  T
Q  151 tgag 154  Q
    ||||    
T  24817766 tgag 24817769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 173
Target Start/End: Original strand, 23105550 - 23105676
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  23105550 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 23105649  T
Q  147 attttgaggtcgacttagtgtgtctac 173  Q
    |||||||| | || ||||| |||||||    
T  23105650 attttgagatggatttagtttgtctac 23105676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 30208747 - 30208860
Alignment:
Q  52 tatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagatttt 151  Q
    ||||||||||||||||||||| ||||  || || |||||||| || |||| |||||||||||| |||| |||||| ||||| ||||||| ||||||||||    
T  30208747 tatgaaaggggaaatggttgtcgaaaccccggcaaagggttcggtgactaattttctagtgtgcttaaagtgtcctttgtcgatgtttgatagagatttt 30208846  T
Q  152 gaggtcgacttagt 165  Q
    |  || ||||||||    
T  30208847 gcagtggacttagt 30208860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 250
Target Start/End: Complemental strand, 17001623 - 17001418
Alignment:
Q  45 tatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtag 144  Q
    ||||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| |    
T  17001623 tatctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcg 17001524  T
Q  145 agattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgtttt 244  Q
     ||||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| |||||||||    
T  17001523 tgattttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgtttt 17001424  T
Q  245 aacaag 250  Q
    | ||||    
T  17001423 agcaag 17001418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 9338203 - 9338000
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  9338203 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 9338104  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  9338103 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 9338004  T
Q  247 caag 250  Q
    ||||    
T  9338003 caag 9338000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 9486837 - 9486634
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  9486837 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 9486738  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  9486737 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 9486638  T
Q  247 caag 250  Q
    ||||    
T  9486637 caag 9486634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 16983861 - 16983658
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  16983861 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 16983762  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  16983761 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 16983662  T
Q  247 caag 250  Q
    ||||    
T  16983661 caag 16983658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 22323164 - 22323367
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  22323164 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 22323263  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  22323264 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttaggtatgaactggttagagtacaaccacgttcttattaattgttttag 22323363  T
Q  247 caag 250  Q
    ||||    
T  22323364 caag 22323367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 23074530 - 23074391
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || |||||   ||||||||||||   | | ||||||||||| || || |||||| | |||| |||||| |||||||| || |||    
T  23074530 ttgttttattgcttttgattgtgctattaagttgggtcttgctatgtctgatatgaatggagagatggttatcgaaactccagctaagggttcggtgact 23074431  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    |||| ||| ||||||||||| ||||| |||||||||||||    
T  23074430 acttctcttgtgtgtttaagatgtcctttgtctatgtttg 23074391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 27220637 - 27220434
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  27220637 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 27220538  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  27220537 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 27220438  T
Q  247 caag 250  Q
    ||||    
T  27220437 caag 27220434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 44383392 - 44383595
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  44383392 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 44383491  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  44383492 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 44383591  T
Q  247 caag 250  Q
    ||||    
T  44383592 caag 44383595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 173
Target Start/End: Original strand, 23029283 - 23029409
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || |  |||||||| ||||||||||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |    
T  23029283 tctgatatgaatggagtgatggttgtcgaaaatccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttgtctatgtttggtcgtg 23029382  T
Q  147 attttgaggtcgacttagtgtgtctac 173  Q
    |||| ||| | || ||||| |||||||    
T  23029383 atttcgagatggatttagtttgtctac 23029409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 24657480 - 24657586
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |    
T  24657480 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttgtctatgtttggtcgtg 24657579  T
Q  147 attttga 153  Q
    |||||||    
T  24657580 attttga 24657586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 24678108 - 24677982
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| | |||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |    
T  24678108 tctgatatgaatggagagatggttgtcgaaacttcagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttgtctatgtttggtcgtg 24678009  T
Q  147 attttgaggtcgacttagtgtgtctac 173  Q
    |||||||| | || ||||| |||||||    
T  24678008 attttgagatggatttagtttgtctac 24677982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 24712655 - 24712457
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  24712655 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 24712556  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgtttta 245  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||    
T  24712555 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgtttta 24712457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 22733596 - 22733689
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    ||||||||||| || ||||||||||| |||| |||| | |||||||| || ||||||| ||| |||||| |||| ||||| |||||||||||||    
T  22733596 tctgatatgaatggagaaatggttgtcgaaactccaactaagggttcggtgactacttctcttgtgtgtataagatgtcccttgtctatgtttg 22733689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 11351533 - 11351736
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  11351533 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 11351632  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   |  |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  11351633 attttgaaatggatttagtttgtctacctttgagcgatatggatgtgattctgggtatgaattggttagagtacaaccatgttcatattaattgttttag 11351732  T
Q  247 caag 250  Q
    ||||    
T  11351733 caag 11351736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 45673834 - 45673940
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||  ||||||||||||||| | |    
T  45673834 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcttttgtctatgtttggtcgtg 45673933  T
Q  147 attttga 153  Q
    |||||||    
T  45673934 attttga 45673940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 21323042 - 21323214
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || ||||| | ||  ||||||||  || | ||||||||||  || || |||||||| |||| |||||| |||||||| || |||    
T  21323042 ttgttttattgctttcgattgtgcttctactttgggtcttgttatgtctgatatgattggagagatggttgtcgaaactccagctaagggttcggtgact 21323141  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctac 173  Q
    |||| ||| || ||||| |  ||||| ||||||||||||||| | ||||| ||| | || ||||| |||||||    
T  21323142 acttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgatttcgagatggatttagtttgtctac 21323214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 21142863 - 21143066
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| ||||||||  | ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  21142863 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcgatgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 21142962  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  21142963 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctaggtatgaactggttagagtacaaccacgttcttattaattgttttag 21143062  T
Q  247 caag 250  Q
    ||||    
T  21143063 caag 21143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 27373890 - 27373795
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  27373890 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 27373795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 24705304 - 24705410
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| |  || |||||||| |||| |||||| |||||||  |||||||||| ||| || ||||| || || || ||||||||||||||| | |    
T  24705304 tctgatatgaatgcagagatggttgtcgaaactccagctaagggtttggtaactacttctctcgtatgtttgagatgccctttgtctatgtttggtcgtg 24705403  T
Q  147 attttga 153  Q
    |||||||    
T  24705404 attttga 24705410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 24874572 - 24874678
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||| ||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  24874572 tctgatatgaatggagagatggttgtcgaaactccagctaaggtttcggtgactacttctctcgtatgtttcaaatgtcctttgtctatgtttggtcgtg 24874671  T
Q  147 attttga 153  Q
    |||||||    
T  24874672 attttga 24874678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 27790193 - 27790125
Alignment:
Q  215 gagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    |||||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||| | ||||| ||||||    
T  27790193 gagtataaccgagttcatatcaattgctttaacaagactgtgcatttttcttctgctgaagaagagagt 27790125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 20879 - 20572
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  20879 ttgtttcattgctattgaatgtgcttataagttgggtctggtcgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 20780  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  |||||||||||||||||| |    
T  20779 acttctcttgtttgtctaagttgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggaatggatgttatttttg 20680  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| |  ||||||||||||||||||  ||| |||||||||| |||||  ||||| ||||||||| ||||| | || ||| |||||||||| ||| |    
T  20679 ggatgaactagttagagtataaccgagttcatatcaattgttttagcaagacagtgcatttttcttctgcggaacaagaaagtggagcagagttcctatc 20580  T
Q  301 tactaaac 308  Q
    ||| ||||    
T  20579 tacaaaac 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 727 - 1001
Alignment:
Q  2 tgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaacta 101  Q
    ||||| |||||| ||||||||||||||||| ||||| | |   |||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  727 tgtttaattgctatagaatgtgcatataagatgggtataaaaatatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaacta 826  T
Q  102 cttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgg 201  Q
    ||| ||| ||||||||||  |||||||||||||||||| ||||||| ||||| |||||||||||  || | | ||||  ||| |||||||||||||| ||    
T  827 cttctcttgtgtgtttaaaatgtccgttgtctatgtttagtagagactttgaagtcgacttagttggttttccgttgacgggtatggatgttatttttgg 926  T
Q  202 gatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaaga 276  Q
     |||||||| ||||||||||||||||||  ||| ||||| ||||  || |||||||| ||||||||||| |||||    
T  927 aatgaattggttagagtataaccgagttcatatcaattgctttagtaatatggtgcatttttcttctactgaaga 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 54112 - 53805
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||| ||||| |||||||||||||||| |  |||||||||||||||| |||||| ||||||||  |||||    
T  54112 ttgtttcattgctattgaatgtgcttataagttgtgtctggttgtatctgatatgaatgtagaaatggttgttgaaactccagctaagggttcattaact 54013  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||||  |||||||||||||||||| |    
T  54012 acttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagagacttttaagtcgacttagtgtgtttaccgttgacgggaatggatgttatttttg 53913  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| |  ||||||||||||||||||  |||  ||||||||| ||||| |||||| ||||||||| ||||||| || ||| ||||||| || |||||    
T  53912 ggatgaactagttagagtataaccgagttcatatctattgttttagcaagacggtgcatttttcttctgcggaagaagatagtggagcagaattcctaac 53813  T
Q  301 tactaaac 308  Q
    ||||||||    
T  53812 tactaaac 53805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 152; Significance: 2e-80; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 49419 - 49686
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||    
T  49419 ttgtttcattgctttagaatgtgcgtataagttgaatttgattgtatctgatatgaaaggagaaatggctgttgaaactccagccaagggttcagtaact 49518  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||| ||||||| |||||| |    
T  49519 acttctcttgtttgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccattgacgggtatggatgctatttttg 49618  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| ||| |||||    
T  49619 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcattttgcttct 49686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 58453 - 58720
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||    
T  58453 ttgtttcattgctttagaatgtgcgtataagttgaatttgattgtatctgatatgaaaggagaaatggctgttgaaactccagccaagggttcagtaact 58552  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||| ||||||| |||||| |    
T  58553 acttctcttgtttgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccattgacgggtatggatgctatttttg 58652  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| ||| |||||    
T  58653 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcattttgcttct 58720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 64841 - 65108
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| ||||||    
T  64841 ttgtttcattgctttagaatgtgcgtataagttgaatttgattgtatctgatatgaaaggagaaatggctgttgaaactccagcaaagggttcagtaact 64940  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||| ||||||| |||||| |    
T  64941 acttctcttgtttgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctaccattgacgggtatggatgctatttttg 65040  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| ||| |||||    
T  65041 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcattttgcttct 65108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 2 - 308
Target Start/End: Complemental strand, 29688 - 29382
Alignment:
Q  2 tgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaacta 101  Q
    ||||| |||||| | || ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  29688 tgtttgattgctgttgattgtgcatataagttgggtctagttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaacta 29589  T
Q  102 cttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgg 201  Q
    ||| ||| || ||| |||||||||| |||||||||||||||||||| ||||| |||||| |||  ||| ||| ||||  ||| ||||| || ||||| ||    
T  29588 cttctcttgtttgtctaaggtgtccattgtctatgtttggtagagactttgaagtcgacctagcttgtttaccgttgacgggtatggaggtgatttttgg 29489  T
Q  202 gatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaact 301  Q
    |||||| || ||||||||||||||||||  ||| ||||| |||||||||| | |||| ||||||||| | ||||| |||||| |||| ||||| ||| ||    
T  29488 gatgaactggttagagtataaccgagttcatatcaattgctttaacaagacgatgcatttttcttctgctgaagaagagagtggagctgagttcctatct 29389  T
Q  302 actaaac 308  Q
    |||||||    
T  29388 actaaac 29382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 151632 - 151325
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| || |||||||| |||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  151632 ttgtttcattgctattgaatgtgcttataagttgggtttggttgtatcttatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 151533  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| ||||||||||||||||||||||||||  |||| ||||||||||| ||| ||| ||||  ||| |||||||||||||| |    
T  151532 acttctcttgtttgtctaagatgtccgttgtctatgtttggtagagacattgaagtcgacttagtttgtttacagttgacgggtatggatgttatttttg 151433  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| |||||||||| ||||| |||||| ||||||||| ||||||| |||||| |||||||||| ||| |    
T  151432 ggatgaactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctatc 151333  T
Q  301 tactaaac 308  Q
    ||| ||||    
T  151332 tacgaaac 151325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 23822 - 23924
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||| | ||||||||||||||| |||||||    
T  23822 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgttctttgtctatgtttggtcgagattt 23921  T
Q  151 tga 153  Q
    |||    
T  23922 tga 23924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 1e-75; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 22027959 - 22028226
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | ||||||||||||||||||||| || || ||||| |||||||||| |||||||||||||||| |||||| |||||||  ||||||    
T  22027959 ttgtttcattgctattgaatgtgcatataagttgggtttggttttatcttatatgaaaggagaaatggttgttgaaactccagctaagggtttagtaact 22028058  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| | | ||||  ||| ||| |||||||||| |    
T  22028059 acttctcttgtttgtttaaggtgtccattgtctatgtttggtagagattttgaggtcgacttagtatgtttgccgttgacgggtatgaatgttatttttg 22028158  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||  |||| |||||| |||||||||    
T  22028159 ggatgaattggttagagtataaccgagttcatataaattgttttagtaagacggtgcatttttcttct 22028226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 29301105 - 29301372
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  29301105 ttgtttcattgctttagaatgtgcatataagttgggtctgcttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 29301204  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| | || |||||||||||||||||||||||||| |||| ||| || ||||| ||| | | ||| | ||| |||||||| ||||| |    
T  29301205 acttctcttgtttgtctgagttgtccgttgtctatgtttggtagagactttgtggttgatttagtttgtttgccgttatcgggtatggatgtaatttttg 29301304  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || ||||||||||| ||||||   || || ||||  ||||||| |||||| |||||||||    
T  29301305 ggatgaactggttagagtataatcgagttcacattaactgttacaacaagacggtgcatttttcttct 29301372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 22053965 - 22053698
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  22053965 ttgtttcattgctttagaaagtgcatataagttgggtctgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 22053866  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| | ||||||||    ||||||||||||||||| |||| ||| || ||||| ||| ||| ||||  ||| |||||||||||||| |    
T  22053865 acttctcttgtttgtctgaggtgtcctacatctatgtttggtagagactttgtggttgatttagtttgtttaccgttgacgggtatggatgttatttttg 22053766  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| |||||||||||||| |||  ||| ||||| ||||  |||| | |||| |||||||||    
T  22053765 gaatgaattggttagagtataaccgggttcatatcaattgctttagtaagacgatgcatttttcttct 22053698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16268903 - 16269131
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  16268903 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 16269002  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |  ||| |  |||||||  | |||||||||||||||||||| | ||| || ||||| ||||| | ||||| ||| ||||||||||||||||    
T  16269003 acttctcttgcttgtctggggtgtcctatatctatgtttggtagagatttcgtggttgatttagtttgtctgccgttgtcgggtatggatgttattttcg 16269102  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    |||||||||| ||||||||||||||||||    
T  16269103 ggatgaattggttagagtataaccgagtt 16269131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 31414211 - 31414478
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||   |||||||| |||||||||||| ||  |||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  31414211 ttgtttcattgctaatgaatgtgcttataagttgggtttggatgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 31414310  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| || || || ||||| |||||||||||||||||||| ||||  | ||||||||| ||| |   ||||  | | |||||||||||||| |    
T  31414311 acttctctagtttgcttgagatgtccattgtctatgtttggtagagactttgtagccgacttagtttgtttgtcgttgacgagtatggatgttatttttg 31414410  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| |||||||||    
T  31414411 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttct 31414478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27357638 - 27357417
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  27357638 ttgttttattgctattgaatgtgcctataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 27357539  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| ||| || ||||| ||||| | ||||| ||| |||||||||||||| |    
T  27357538 acttctcttgtttgtctggggtgtcctatatctatgtttggtagagattttgtggttgatttagtttgtctgccgttgtcgggtatggatgttatttttg 27357439  T
Q  201 ggatgaattgattagagtataa 222  Q
    | |||||||| ||||| |||||    
T  27357438 gaatgaattggttagattataa 27357417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 21928530 - 21928306
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || ||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  21928530 ttgtttcattgctgttgattgtgcatataagttgggtctggttatatctgatatgaatggcgaaatggttgttgaaactccagctaagggttcagtaact 21928431  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||| |||||||||||||||||||||| ||||| |||||  |||| ||| | | ||||  ||| |||||| | ||||| |    
T  21928430 acttctcttgtttgtttgagctgtgcgttgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttgacgggtatggatataatttttg 21928331  T
Q  201 ggatgaattgattagagtataaccg 225  Q
    ||||||| ||  |||||||||||||    
T  21928330 ggatgaactggatagagtataaccg 21928306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 28984012 - 28983785
Alignment:
Q  2 tgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaacta 101  Q
    ||||| |||||| | |||||||| |||||||||||| ||  | |||||||||||||||| |||||||||||||||| |||||| |||||||| ||||| |    
T  28984012 tgttttattgctattgaatgtgcttataagttgggtttggatatatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaacca 28983913  T
Q  102 cttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgg 201  Q
    ||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | ||||| || ||||| | ||||  ||| ||||||||||| || ||    
T  28983912 cttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgacttggtttgtctgccgttgacgggtatggatgttatctttgg 28983813  T
Q  202 gatgaattgattagagtataaccgagtt 229  Q
     |||||||| ||||||||||| ||||||    
T  28983812 tatgaattggttagagtataatcgagtt 28983785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 19985282 - 19985124
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || |||||||||||||||||| || || ||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  19985282 ttgtttcattgttgttgattgtgcatataagttgggtttggttatatctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 19985183  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcga 159  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||| ||||| |||||    
T  19985182 acttctcttgtttgtttgagttgtccattgtctatgtttggtagagactttgaagtcga 19985124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 28989231 - 28989004
Alignment:
Q  2 tgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaacta 101  Q
    ||||| |||||| | |||||||| |||||||||||| ||  | |||||||||||||||| |||||||||||||| | |||||| |||||||| ||||| |    
T  28989231 tgttttattgctattgaatgtgcttataagttgggtttggatatatctgatatgaaaggagaaatggttgttgatactccagctaagggttcagtaacca 28989132  T
Q  102 cttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgg 201  Q
    ||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | ||||| || ||||| | ||||  ||| ||||||||||| || ||    
T  28989131 cttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgacttggtttgtctgccgttgacgggtatggatgttatctttgg 28989032  T
Q  202 gatgaattgattagagtataaccgagtt 229  Q
     |||||||| ||||||||||| ||||||    
T  28989031 tatgaattggttagagtataatcgagtt 28989004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 22373969 - 22373819
Alignment:
Q  3 gtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactac 102  Q
    ||||||||| | | || ||||||||||||||||||||  || ||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||||    
T  22373969 gtttcattgatgttgattgtgcatataagttgggtctagttatatctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaactac 22373870  T
Q  103 ttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    || ||| || ||||| || ||||| ||||||||||||| |||||| |||||    
T  22373869 ttctcttgtttgtttgagttgtccattgtctatgtttgatagagactttga 22373819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 62 - 224
Target Start/End: Complemental strand, 20391127 - 20390965
Alignment:
Q  62 gaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgact 161  Q
    |||||||||||||||| |||||| |||||||| |||||||||| ||| || ||||| || |||| ||||||||||||||||||||||||||| || ||      
T  20391127 gaaatggttgttgaaactccagctaagggttcagtaactacttctctcgtttgtttgagttgtctgttgtctatgtttggtagagattttgaagttgatc 20391028  T
Q  162 tagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataacc 224  Q
    | || ||| | | |||| |||| |||||||| || || |||||||| || || ||||||||||    
T  20391027 ttgtatgtttgccgttgatgggtatggatgtaatctttgggatgaactggttggagtataacc 20390965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 21254001 - 21253894
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  21254001 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 21253902  T
Q  147 attttgag 154  Q
    ||||||||    
T  21253901 attttgag 21253894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 21391586 - 21391693
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || |||||||||||||||| |||||| |||||||| || || |||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  21391586 tctgatatgaatggagaaatggttgttgaaactccagctaagggttcggtgaccacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 21391685  T
Q  147 attttgag 154  Q
    ||||||||    
T  21391686 attttgag 21391693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 21780912 - 21781019
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || |||||||||||||||| |||||| |||||||| || || |||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  21780912 tctgatatgaatggagaaatggttgttgaaactccagctaagggttcggtgaccacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 21781011  T
Q  147 attttgag 154  Q
    ||||||||    
T  21781012 attttgag 21781019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 21786080 - 21786187
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || |||||||||||||||| |||||| |||||||| || || |||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  21786080 tctgatatgaatggagaaatggttgttgaaactccagctaagggttcggtgaccacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 21786179  T
Q  147 attttgag 154  Q
    ||||||||    
T  21786180 attttgag 21786187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 173
Target Start/End: Original strand, 21164263 - 21164389
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |    
T  21164263 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcagtgactacttctctcgtatgtttgagatgtcctttgtctatgtttggtcgtg 21164362  T
Q  147 attttgaggtcgacttagtgtgtctac 173  Q
    |||| ||| | |||||||| |||||||    
T  21164363 atttcgagatggacttagtttgtctac 21164389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 19981069 - 19980897
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || ||||| | ||  ||||||||  || | ||||||||||| || || |||||||| |||| |||||| |||||||| || |||    
T  19981069 ttgttttattgctttcgattgtgcttctactttgggtcttgttatgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgact 19980970  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctac 173  Q
    |||| ||| || ||||| |  ||||| ||||||||||||||| | ||||||||| | || ||||| |||||||    
T  19980969 acttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgattttgagatggatttagtttgtctac 19980897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 17671747 - 17671950
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  17671747 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 17671846  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  17671847 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 17671946  T
Q  247 caag 250  Q
    ||||    
T  17671947 caag 17671950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 32603201 - 32602998
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  32603201 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggttgtg 32603102  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  32603101 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 32603002  T
Q  247 caag 250  Q
    ||||    
T  32603001 caag 32602998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 22990097 - 22989995
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||||| ||||| ||||||||||||||| | |||||    
T  22990097 atatgaatggagagatggttgtcgaaactccagcgaagggttcggtgactacttctcttgtatgtttaagatgtcccttgtctatgtttggtcgtgattt 22989998  T
Q  151 tga 153  Q
    |||    
T  22989997 tga 22989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 22245758 - 22245846
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||||||| |||| |||||| |||||||| || ||||||| ||| ||||| ||||  ||||| ||||||||||||||| ||||||||||    
T  22245758 atggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgcttaatatgtcctttgtctatgtttggtcgagattttga 22245846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 22246176 - 22246264
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||||||| |||| |||||| |||||||| || ||||||| ||| ||||| ||||  ||||| ||||||||||||||| ||||||||||    
T  22246176 atggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgcttaatatgtcctttgtctatgtttggtcgagattttga 22246264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 15536439 - 15536236
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||| | ||||| |||||||| |||||| | |    
T  15536439 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttacgttgtcctttgtctatatttggtcgtg 15536340  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || ||| |||| ||||| || | |||||| |||||||| ||||  |||  ||| ||||||||||     
T  15536339 attttgaaatggatttagtttgtctacctttgagcggtatgaatgtgattttgggtacgaattggttagagtacaaccatgttcatattaattgttttag 15536240  T
Q  247 caag 250  Q
    ||||    
T  15536239 caag 15536236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 19115456 - 19115253
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || ||||||||  ||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  19115456 tctgatatgaatggagagatggttgtcaaaactccagctaagggttcagtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 19115357  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  19115356 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 19115257  T
Q  247 caag 250  Q
    ||||    
T  19115256 caag 19115253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 20015988 - 20016191
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  20015988 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 20016087  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | |  ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  20016088 attttgaaatgggtttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 20016187  T
Q  247 caag 250  Q
    ||||    
T  20016188 caag 20016191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 22129342 - 22129545
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| ||  | |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  22129342 tctgatatgaatggacagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 22129441  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  22129442 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 22129541  T
Q  247 caag 250  Q
    ||||    
T  22129542 caag 22129545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 30310869 - 30311072
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| || | |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  30310869 tctgatatgaatggagagatggttgtcgagactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 30310968  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  30310969 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 30311068  T
Q  247 caag 250  Q
    ||||    
T  30311069 caag 30311072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 18859633 - 18859527
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  18859633 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 18859534  T
Q  147 attttga 153  Q
    |||||||    
T  18859533 attttga 18859527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 22375183 - 22375284
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || ||||| || |||| |||| | |||||||| || ||||||| ||  ||||||||||| ||||| |||||||||||||||||||||||    
T  22375183 atatgaatggagagatggtcgtcgaaactccaactaagggttcggtgactacttctcc-gtgtgtttaagatgtcctttgtctatgtttggtagagattt 22375281  T
Q  151 tga 153  Q
    |||    
T  22375282 tga 22375284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 22421621 - 22421723
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| || |||||||||| | | |||||    
T  22421621 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttatctatgtttgatcgtgattt 22421720  T
Q  151 tga 153  Q
    |||    
T  22421721 tga 22421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 22042883 - 22042680
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||  || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||||||||||||||| | |    
T  22042883 tctgatatgattggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggtcgtg 22042784  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| ||||| || ||||  |||  ||| ||||||||||     
T  22042783 attttgaaatggatttagtttgtctacctttgaacggtatggatgtgattctaggtatgaattggttagaatacaaccatgttcatatcaattgttttag 22042684  T
Q  247 caag 250  Q
    ||||    
T  22042683 caag 22042680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 22117900 - 22117995
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  22117900 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 22117995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 22523598 - 22523507
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||| | || ||||||||||||    
T  22523598 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgttctttttctatgtttggt 22523507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 22031159 - 22031064
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||| | |||||||| || ||||||| ||| || |||||  | ||||| |||||||||||||||    
T  22031159 tctgatatgaatggagagatggttgtcgaaactccaactaagggttcggtgactacttctctcgtatgtttgcgatgtcctttgtctatgtttggt 22031064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 22126684 - 22126779
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || | ||||| ||| || ||||| |  ||||| |||||||||||||||    
T  22126684 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgattacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 22126779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 5448 - 5750
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  5448 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctaatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 5547  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||| ||||||||||||||||||||| ||| | ||||||||||| ||| ||| ||||  ||| |||||| ||||||| |    
T  5548 acttctcttgtttgtctaaggtgtctgttgtctatgtttggtagagactttaaagtcgacttagtctgtttaccgttgacgggtatggatattatttttg 5647  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| | ||  |||| | ||| |||||| ||||||||| ||||||| |||||| |||||||||| |||||    
T  5648 ggatgaactggttagagtataaccgagttcatatcagtttctttagccagacggtgcatttttcttctgcggaagaagagagtggagcagagttcctaac 5747  T
Q  301 tac 303  Q
    |||    
T  5748 tac 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1093 - 1321
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  1093 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatatgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 1192  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||  | |||||||||||||||| |    
T  1193 acttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtgtgtttaccgttgacgagaatggatgttatttttg 1292  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    ||||||| || ||||||||||||||||||    
T  1293 ggatgaactggttagagtataaccgagtt 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 133 - 308
Target Start/End: Complemental strand, 1355 - 1180
Alignment:
Q  133 tatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgt 232  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||    
T  1355 tatgtttggtagagattttgaggtcgacttagtgtgtctaccgttgttgggaatggatgttattttcgggatgaattggttagattataaccgagtctgt 1256  T
Q  233 ataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    ||||||||||||||||||| |||||||||||||||| |||| || |||||| ||||||||||||||||||||||||    
T  1255 ataaattgttttaacaagacggtgcacttttcttctgcggaggaggagagtggagcagagtttctaactactaaac 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 8679 - 8412
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||| |||||| |||||||| ||||||    
T  8679 ttgtttcattgctattgaatgtgcatataagttgggtttggttgtatctgatataaaaggagaaatggttgttgaaactccagctaagggttcagtaact 8580  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||| | | ||||  | | |||||||||||||| |    
T  8579 acttctcttgtttgtctaaggtgtccattgtctatgtttggtagagattttgaggtcgacttagtatgtttgccgttgacgtgtatggatgttatttttg 8480  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| |||||||||    
T  8479 ggatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttct 8412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 15188 - 14921
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||||| |||||||| | ||||    
T  15188 ttgtttcattgctattgaatgtgcatataagttgggtttgattgtatttgatatgaaaggagaaatggttgttgaaactccagctaagggttcagcaact 15089  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| ||| |||||||||| |||||||||||| ||||||||||||| ||||||||||| ||| | | |||| |||| |||||||||||||| |    
T  15088 acttctctagtttgtctaaggtgtccattgtctatgtttcgtagagattttgaagtcgacttagtttgtttgccgttgatgggtatggatgttatttttg 14989  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| |||||||||    
T  14988 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttct 14921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 6128 - 6026
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    |||||||||| || ||| |||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||| ||||||||| ||||| |    
T  6128 atatgaaaggagagatgattgtcgaaactccagctaagggttcggtgactacttctctcgtgtgtttaagatgtcctttgtcaatgtttggtcgagatgt 6029  T
Q  151 tga 153  Q
    |||    
T  6028 tga 6026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 1185 - 919
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||  |||||||| ||||||    
T  1185 ttgtttcattgctattgaatgtgcttataagttgggtctggttgtatctgatatgaaaggggaaattgttgttgaaactccagttaagggttcagtaact 1086  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  ||| |||||||||||||| |    
T  1085 acttctcttgtttgtctaaggtgtctgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggtatggatgttatttttg 986  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttc 267  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||    
T  985 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 94 - 401
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  94 ttgtttcattgctgttgattgtgcatataagttgggtctggttatatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 193  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| ||| |||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  ||| |||||||| ||||| |    
T  194 acttctcttgtttgtataagatgtacgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggtatggatgtgatttttg 293  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || |||| |||||||||||||  ||| ||||| |||| ||| | |||||| ||||||||| | ||||| |||||| |||| ||||| ||| |    
T  294 ggatgaactggttagggtataaccgagttcatattaattgctttagcaaaacggtgcatttttcttctgctgaagaagagagtggagcggagttcctatc 393  T
Q  301 tactaaac 308  Q
    ||||||||    
T  394 tactaaac 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 63758 - 64065
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  63758 ttgtttcattgttgttgattgtgcatataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 63857  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || |||||||||||||||||||||||||| ||||| |||||  |||| ||| | | ||||||||| |||||||| ||||| |    
T  63858 acttctcttgtttgtttgagttgtccgttgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttgttgggtatggatgtgatttttg 63957  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| ||||  |||| | |||| ||||||||||| ||||| ||||||  ||| |||||  ||||    
T  63958 ggatgaactggttagagtataaccgagttcatatcaattgctttagtaagacgatgcatttttcttctactgaagaagagagtgaagctgagttcttaac 64057  T
Q  301 tactaaac 308  Q
    ||||||||    
T  64058 tactaaac 64065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 263291 - 263024
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  263291 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 263192  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  ||||||||| |||||||| |    
T  263191 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggacgttatttttg 263092  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| ||| || |||||||||    
T  263091 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtacatttttcttct 263024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 9466 - 9767
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||| | ||||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||| |||||||| ||||||    
T  9466 ttgtttcattgctattgaatgtacttataagttgggtctggttgtatctgatatgaaacgggaaatagttgttgaaactccagctaagggttcagtaact 9565  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||||||||||||||||||||||||||||||  || | ||||||||||| ||| ||| ||||  ||| ||||||||||||||      
T  9566 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagacattaaagtcgacttagtttgtttaccgttgacggg-atggatgttatttttt 9664  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||| ||||||||||||  ||| |||||||||| ||||| |||||| ||||||||| ||||||| || ||| |||||||||| ||| |    
T  9665 ggatgaactggttagaatataaccgagttcatatcaattgttttagcaagacggtgcatttttcttctgcggaagaagaaagtggagcagagttcctatc 9764  T
Q  301 tac 303  Q
    |||    
T  9765 tac 9767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 784 - 1051
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||| | |||| |||||||| || |||    
T  784 ttgtttcattgctttagaatgtgcatataagttgggtttgattgtatctgatatgaaaggagagatggttgttgaaacttcagctaagggttcagtgact 883  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    ||||  || || ||||| ||||||||  | |||||||||||||| ||||||||||| |||||||| ||||||| ||||  |||||||||||| ||||| |    
T  884 acttcccttgtttgtttgaggtgtcctctatctatgtttggtagggattttgaggtagacttagtttgtctaccgttgacgggaatggatgtcatttttg 983  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  |||||| |  |||| |||||  ||||| |||||||||    
T  984 ggatgaattggttagagtataaccgagttcatataaactactttagcaagacagtgcatttttcttct 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 10801 - 10699
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |||||    
T  10801 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtccattgtctatgtttggtcgtgattt 10702  T
Q  151 tga 153  Q
    |||    
T  10701 tga 10699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 10025 - 10292
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||||| | ||||||    
T  10025 ttgtttcattgctttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggtacagtaact 10124  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  ||||||||| ||||||||      
T  10125 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggacgttatttttt 10224  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| ||| || |||||||||    
T  10225 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtacatttttcttct 10292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 65537 - 65804
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  65537 ttgtttccttgctttagaatgtgcatataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 65636  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||||||||||||  | || |||||||||||||||||||| || |||||||| ||| | | ||||  ||| |||||||||||||| |    
T  65637 acttctcttgtttgtttaaggtgtcctatatccatgtttggtagagattttgaagttgacttagtatgtttgccgttgacgggtatggatgttatttttg 65736  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||| ||||||  ||| ||||| ||||  |||| ||| || |||||||||    
T  65737 gaatgaattggttagagtataatcgagttcatatcaattgctttagtaagacggtacatttttcttct 65804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 110675 - 110368
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||| ||| || |||||||| ||||||    
T  110675 ttgtttcattgttgttgattgtgcatataagttgggtctggttgtgtctgatatgaaaggagaaatggttgttaaaactccggctaagggttcagtaact 110576  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||| || |||| ||| |||  |||  ||| |||||||| ||||| |    
T  110575 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcaacctagtttgtttacctttgacgggtatggatgtaatttttg 110476  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| | ||||| |||||| |||| ||||| ||| |    
T  110475 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgcagaagaagagagtggagccgagttcctatc 110376  T
Q  301 tactaaac 308  Q
    ||||||||    
T  110375 tactaaac 110368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 37004 - 36711
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||||  |||||    
T  37004 ttgtttcattgatgttgattgtgcatacaagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcaataact 36905  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  ||| ||||||| |||||| |    
T  36904 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggtatggatgatatttttg 36805  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtt 294  Q
    ||||||| || ||||||||||| ||||||  ||| ||||  |||| ||||| || ||| ||||||||| | ||||| |||||| |||| |||||    
T  36804 ggatgaactgtttagagtataatcgagttcatatcaatttctttagcaagacggcgcatttttcttctgctgaagaagagagtggagctgagtt 36711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 268
Target Start/End: Original strand, 8702 - 8967
Alignment:
Q  2 tgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaacta 101  Q
    |||||||||||| | |||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  8702 tgtttcattgctatcgaatgtgcttataagttaggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaacta 8801  T
Q  102 cttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgg 201  Q
    ||| ||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||| ||||   |||||||| |||||||| ||    
T  8802 cttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgatctagtgtgtttaccgttgacaggaatggacgttatttttgg 8901  T
Q  202 gatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||| || |  |||||||||||||| |||  ||| |||||||||| |||||  ||||| |||||||||    
T  8902 gataaactagttagagtataaccgggttcatatcaattgttttagcaagacagtgca-ttttcttct 8967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 268
Target Start/End: Original strand, 18916 - 19181
Alignment:
Q  2 tgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaacta 101  Q
    |||||||||||| | |||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||    
T  18916 tgtttcattgctatcgaatgtgcttataagttaggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaacta 19015  T
Q  102 cttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgg 201  Q
    ||| ||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||| ||||   |||||||| |||||||| ||    
T  19016 cttctcttgtgtgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgatctagtgtgtttaccgttgacaggaatggacgttatttttgg 19115  T
Q  202 gatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||| || |  |||||||||||||| |||  ||| |||||||||| |||||  ||||| |||||||||    
T  19116 gataaactagttagagtataaccgggttcatatcaattgttttagcaagacagtgca-ttttcttct 19181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 50170 - 49863
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||| ||  ||||||||||||||||||| ||||| |||||||||| |||||| |||||||| ||||||    
T  50170 ttgtttcattgctgttgattgtgcatataagttggggctagttgtatctgatatgaaaggagaaattgttgttgaaactccagctaagggttcagtaact 50071  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||| |||||||||||||||||||||||||| ||||| |||||  | || ||  ||| ||||  ||| |||||||| ||||| |    
T  50070 acttctcttgtttgtctaagttgtccgttgtctatgtttggtagagactttgaagtcgatcttgtttgcttaccgttgacgggtatggatgtaatttttg 49971  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || ||||||||||||| ||||  ||| ||||| ||||  |||| |||||| ||||||||| ||||||| ||||||  ||| ||||| |||||    
T  49970 ggatgaaatggttagagtataaccaagttcatatcaattgctttagtaagacggtgcatttttcttctgcggaagaagagagtgaagctgagttcctaac 49871  T
Q  301 tactaaac 308  Q
    ||||||||    
T  49870 tactaaac 49863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 34402 - 34095
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||| || |||||||||||||| | |||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||| ||    
T  34402 ttgtttcattgctgttgaatatgtatataagttgggtccggttgtatctgatatgaaagtggaaatggttgttgaaattccagctaagggttcagtagct 34303  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    | || ||| || ||| ||||||||||||||||||||||||||| ||| ||||| |||||| |||| ||| ||  ||||  ||| |||||||| ||||| |    
T  34302 atttctcttgtttgtctaaggtgtccgttgtctatgtttggtaaagactttgaagtcgacctagtttgtttatcgttgacgggtatggatgtaatttttg 34203  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || |||||||| || ||||||  ||| ||||  |||| ||||| |||||| ||||||||||| ||||| |||||| |||| ||||| ||| |    
T  34202 ggatgaactggttagagtacaatcgagttcatatcaattactttagcaagacggtgcatttttcttctactgaagaagagagtggagcggagttcctatc 34103  T
Q  301 tactaaac 308  Q
    ||||||||    
T  34102 tactaaac 34095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 21916 - 21649
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||| |||||||| ||||||| |||||| |||||||| || |||    
T  21916 ttgtttcattgctttagagtgtgcatataaattgggtttgattatatctgatatgaaaggagaaatggtcgttgaaactccagctaagggttcagtgact 21817  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| ||||||||  | |||||||| ||||| ||||||||||| |||||||| ||| ||| | ||  |||||||||||||||||| |    
T  21816 acttctcttgtttgtttgaggtgtcctatatctatgttcggtagggattttgaggtagacttagtttgtttaccgctgacgggaatggatgttatttttg 21717  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||| ||||| ||||||||||||||||||  ||| || || ||||||||||  ||||| |||||||||    
T  21716 ggattaattggttagagtataaccgagttcatatcaactgctttaacaagaccgtgcatttttcttct 21649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 22187 - 21920
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | ||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||||| |  ||| ||| |||| ||||||    
T  22187 ttgtttcattgctattgaatgtgcatatatgttgggtttggttgtatctgatatgaaaggagaaatggttgttgaaactttagctaagtgttcagtaact 22088  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||| | | | ||  ||| |||||||||||||| |    
T  22087 acttctcttgtttgtctaaggtgtccattgtctatgtttggtagagattttgaggtcgatttagtttgtttgccgctgacgggtatggatgttatttttg 21988  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| ||||| ||||  |||| |||||| |||||||||    
T  21987 gaatgaattggttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttct 21920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 119; Significance: 8e-61; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 20767 - 21022
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  20767 ttgtttcattgctgttgattgtgcatataaattgggtctggttgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 20866  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| |||||| |||| ||| ||| |||||      ||||||| ||||| |    
T  20867 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacctagtttgtttaccgttgt--ctcttggatgtgatttttg 20964  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgca 258  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| ||||||    
T  20965 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgca 21022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 12587 - 12842
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||| |||| |||| |||||||  |||||||||| |||||||||||||||| |||| | |||||||| ||||||    
T  12587 ttgtttcattgctgttgattgtgcatataaattggatctggttgtatcaaatatgaaaggagaaatggttgttgaaactccaactaagggttcagtaact 12686  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| |||||| |||| ||| ||| |||||      ||||||| ||||| |    
T  12687 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgacctagtttgtttaccgttgt--ctcttggatgtgatttttg 12784  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgca 258  Q
    ||||||| || ||||||||||||||||||  ||| ||||| |||| ||||| ||||||    
T  12785 ggatgaactggttagagtataaccgagttcatatcaattgctttagcaagacggtgca 12842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 1148 - 1350
Alignment:
Q  27 ataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtcc 126  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||||| ||| || ||| |||| |||||    
T  1148 ataagttgggtctgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaactacttctcttgtttgtctaagatgtcc 1247  T
Q  127 gttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccga 226  Q
    ||||||||||||||||||||| ||||| || |||||||| ||| ||| ||||  ||| |||||||||||||| |||||||| || |||||||||||||||    
T  1248 gttgtctatgtttggtagagactttgaagtggacttagtttgtttaccgttgacgggtatggatgttatttttgggatgaactggttagagtataaccga 1347  T
Q  227 gtt 229  Q
    |||    
T  1348 gtt 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 164640 - 164905
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||  | |||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||||| |||||| || |||||  |||||    
T  164640 ttgtttcattgccattgaatgtgcttataagttgggtctggttatatctgataagaaaggggaaatggttgttgaaactccagcaaatggttcaataact 164739  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || | | |||||||||  ||||||||||||||||| || ||| ||||||| ||||||||| ||| ||||  |||||| ||||||||||| |    
T  164740 acttctcttgtttatctaaggtgtctattgtctatgtttggtagggactttcaggtcgatttagtgtgtttaccgttgacgggaatagatgttatttttg 164839  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttctt 266  Q
    ||||||| || ||||||||||||||||||  ||| |||||||||| ||||| |||||| |||||||    
T  164840 ggatgaactggttagagtataaccgagttcatatcaattgttttagcaagacggtgcatttttctt 164905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 152100 - 151993
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  152100 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 152001  T
Q  147 attttgag 154  Q
    ||||||||    
T  152000 attttgag 151993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 47272 - 47373
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||| | |||| ||| || ||||||| ||| ||||||||||||||||  ||||||||||||| | | |||||    
T  47272 atatgaatggagagatggttgtcgaaactccatctaagg-ttcggtgactacttctcttgtgtgtttaaggtgtcttttgtctatgtttgatcgtgattt 47370  T
Q  151 tga 153  Q
    |||    
T  47371 tga 47373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 276
Target Start/End: Complemental strand, 42744 - 42488
Alignment:
Q  20 tgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaa 119  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||||  ||||||||| ||| || ||| |||    
T  42744 tgtgcatataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcaataactacttctcttgtttgtctaa 42645  T
Q  120 ggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||  |||   || |||||||| ||||| |||||||| || ||||||||    
T  42644 ggtgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccattgacaggtatggatgtaatttttgggatgaactggttagagta 42545  T
Q  220 taaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaaga 276  Q
    ||||||||||  ||| ||||| ||||  |||  |||||| | ||||||||| |||||    
T  42544 taaccgagttcatattaattgctttagtaagccggtgcattattcttctactgaaga 42488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 50584 - 50756
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || ||||| | ||  ||||||||  || | ||||||||||| || || |||||||| |||| |||||| |||||||| || |||    
T  50584 ttgttttattgctttcgattgtgcttctaccttgggtcttgttatgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcagtgact 50683  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctac 173  Q
    |||| |||  | ||||| |  ||||| ||||||||||||||| | ||||||||| | || ||||| |||||||    
T  50684 acttctctcatatgtttgaaatgtcctttgtctatgtttggtcgtgattttgagatggatttagtttgtctac 50756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 1550 - 1817
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||| |||||||| |||| |    
T  1550 ttgtttcattgctattgactgtgcatataagttgggtctggttgtatctgatacgaaaggagaaatggttgttgaaactccagctaagggttcggtaatt 1649  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| |||||  | || ||| ||| ||||  ||| |||||||| ||||| |    
T  1650 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgatcttgtttgtttaccgttgacgggtatggatgtaatttttg 1749  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || ||||||||||||||||||  ||| ||||| ||||  |||| | |||| |||||||||    
T  1750 ggatgaactggttagagtataaccgagttcatatcaattgctttagtaagacgatgcatttttcttct 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 7809 - 7542
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||| |||||||| |||| |    
T  7809 ttgtttcattgctattgactgtgcatataagttgggtctggttgtatctgatacgaaaggagaaatggttgttgaaactccagctaagggttcggtaatt 7710  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| ||||||||||||||||||||||||||||||| ||||| |||||  | || ||| ||| ||||  ||| |||||||| ||||| |    
T  7709 acttctcttgtttgtctaaggtgtccgttgtctatgtttggtagagactttgaagtcgatcttgtttgtttaccgttgacgggtatggatgtaatttttg 7610  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || ||||||||||||||||||  ||| ||||| ||||  |||| | |||| |||||||||    
T  7609 ggatgaactggttagagtataaccgagttcatatcaattgctttagtaagacgatgcatttttcttct 7542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 251687 - 251420
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| ||  |||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  251687 ttgtttcattgctattgaatgtgcttataagttgggtttggatgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 251588  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| || || || ||||| |||||||||||||||||||| ||||  |||||  |||| ||| | | ||||| ||| |||||||||||||| |    
T  251587 acttctctagtttgcttgagatgtccattgtctatgtttggtagagactttgtagtcgatctagtttgtttgccgttgtcgggtatggatgttatttttg 251488  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||   ||||| || ||||  |||| |||||| |||||||||    
T  251487 ggatgaattggttagagtataaccgagttcaaataaactgctttagtaagacggtgcatttttcttct 251420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5384 - 5612
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | |||||||| |||||||||||| ||  |||||||||||||||| | |||||||||||||||| |||||| |||||||| ||||||    
T  5384 ttgtttcattgctattgaatgtgcttataagttgggtatggatgtatctgatatgaaaagagaaatggttgttgaaactccagctaagggttcagtaact 5483  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| |||||| || || |||||||| |||| |||||||||||||||||||| ||| || ||||| ||| | | ||||| | | |||||||||||||| |    
T  5484 acttctctagtttgcttgaggtgtccattgtttatgtttggtagagattttgtggttgatttagtttgtttgccgttgtcgcgtatggatgttatttttg 5583  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    |||||||||| ||||||||||||||||||    
T  5584 ggatgaattggttagagtataaccgagtt 5612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 308
Target Start/End: Complemental strand, 1261 - 977
Alignment:
Q  16 agaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgt 115  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||| |||||| |||||||        |||| ||| || |||    
T  1261 agaatgtgcatataagttgggtctggttgtatccgatatgaaaggataaatggttgttgaaactccagctaagggtt--------acttctcttgtttgt 1170  T
Q  116 ttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattag 215  Q
     |||| |||| ||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  ||| |||||||||||||| |||||||| |  ||||    
T  1169 ctaagatgtctgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggtatggatgttatttttgggatgaactagttag 1070  T
Q  216 agtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    ||||||| ||||||  ||| ||||| |||| ||||| |||||| ||||||||| | ||||| |||||| |||||||||| ||| |||||||||    
T  1069 agtataatcgagttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagcagagttcctatctactaaac 977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 67347 - 67614
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| ||||| |||||| ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  67347 ttgttttattgccttagaaagtgcatataagttgggtttgattgtatccgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 67446  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||  |||||||  | |||||||||||||||||||||| ||| ||  |||| ||  | | ||||| ||| ||||| ||||||||||    
T  67447 acttctcttgtttgtttggggtgtcctatatctatgtttggtagagattttgtggttgatctagtttgcttgccgttgtcgggtatggacgttattttcg 67546  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||||||||| ||||||||||||||||||  ||| || || ||||  |||| |||||| |||||||||    
T  67547 ggatgaattggttagagtataaccgagttcatatcaactgctttagtaagacggtgcatttttcttct 67614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 49116 - 49383
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||    
T  49116 ttgtttcattgatgttgattgtgcatataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaaatcaagctaagggttcagtaact 49215  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || |||| ||||||||||||||||||||| ||||| |||||  |||| | | | | ||||| ||| |||||||| ||||| |    
T  49216 acttctcttgtttgtttgagttgtctgttgtctatgtttggtagagactttgaagtcgatctagtatatttgccgttgtcgggtatggatgtaatttttg 49315  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || ||||||||||||||||||  ||| ||||| ||||  ||||  ||||| |||||||||    
T  49316 ggatgaactggttagagtataaccgagttcatattaattgctttagtaagacagtgcatttttcttct 49383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 60804 - 60537
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||  || ||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  60804 ttgtttcattgctgttgattgtgcatataagttgggtctagttatatctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 60705  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || |||||||||||||||||||||||||| ||||| |||||  |||| ||| | | ||||| ||| |||||||| ||||| |    
T  60704 acttctcttgtttgtttgagttgtccgttgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttgtcgggtatggatgtgatttttg 60605  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || |||||||||||||| |||  ||| ||||| ||||  |||| |||||| |||||||||    
T  60604 ggatgaactggttagagtataaccgtgttcatattaattgctttagtaagacggtgcatttttcttct 60537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 70173 - 70081
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttc 93  Q
    ||||||||||||| | || ||||||||||||||||||||  || ||||||||||||| || |||||||||||||||| |||||| ||||||||    
T  70173 ttgtttcattgctgttgattgtgcatataagttgggtctagttatatctgatatgaatggagaaatggttgttgaaactccagctaagggttc 70081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 53662 - 53944
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||||| |||| ||||| ||||||||||||| ||| | ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| || |||    
T  53662 ttgtttcaatgctatagaaagtgcatataagttaggtttaattgtatctgaaatgaaaggagaaatggttgttgaaactccagctaagggttcagtgact 53761  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || || || || ||||| |||||||||||||||||||| ||||| ||||||||||| ||| | | ||||  ||| |||||||||||||| |    
T  53762 acttctcttgtttgcttgagatgtccattgtctatgtttggtagagactttgaagtcgacttagtttgtttgccgttgacgggtatggatgttatttttg 53861  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    | |||||||  ||||||||||||||||||  ||| ||||| ||||  |||| |||||| ||||||||| | ||||| ||||||    
T  53862 gaatgaattagttagagtataaccgagttcatatcaattgctttagtaagacggtgcatttttcttctgctgaagaagagagt 53944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 31118 - 31183
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||| || ||||||||||||||||||  ||| ||||||||||  |||| |||||| |||||||||    
T  31118 atgaactggttagagtataaccgagttcatatcaattgttttagtaagacggtgcatttttcttct 31183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 203446 - 203249
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  203446 ttgtttcattgctttagaaagtgcttataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 203347  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttatttt 198  Q
    |||| ||| || ||||| ||||||||  | |||||||||||||||||||||||||| |||||||| ||| | | ||||  ||||||||| ||||||||    
T  203346 acttctcttgtttgtttgaggtgtcctatatctatgtttggtagagattttgaggtagacttagtttgtttgccgttgacgggaatggacgttatttt 203249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 2917 - 2670
Alignment:
Q  20 tgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaa 119  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||||| ||| || ||||| |    
T  2917 tgtgcatataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaactacttctcttgtttgtttga 2818  T
Q  120 ggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    | ||||| |||||||||||||||||||| ||||| |||||  |||| ||| | | ||||  ||| || ||||| ||||| |||||||| || ||||||||    
T  2817 gttgtccattgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttgacgggtatagatgtaatttttgggatgaactggttagagta 2718  T
Q  220 taaccgagtttgtataaattgttttaacaagatggtgcacttttcttc 267  Q
    ||||||||||  ||| ||||| ||||  |||| |||||| ||||||||    
T  2717 taaccgagttcatattaattgctttagtaagacggtgcatttttcttc 2670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 5870 - 5693
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||| | |||||| ||||||    
T  5870 ttgtttcattgctatttaatgtgcatataagttgggtctggttgtatctgatatgaaagaagaaatggttgttgaaactccagctatgggttcagtaact 5771  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttg 178  Q
    |||| ||| || ||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||    
T  5770 acttctcttgtttgtctaagatgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttg 5693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 130 - 308
Target Start/End: Complemental strand, 5687 - 5509
Alignment:
Q  130 gtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtt 229  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||| ||||  ||| |||||||||||||| ||||||||||| |||||||||||||| |||    
T  5687 gtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttgacgggtatggatgttatttttgggatgaattggttagagtataaccgggtt 5588  T
Q  230 tgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
      ||| ||||| |||| |||||  ||||| ||||||||||||||||| |||||| |||| ||||| ||| |||| ||||    
T  5587 catatcaattgctttagcaagacagtgcatttttcttctacggaagaagagagtggagcggagttcctatctacgaaac 5509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12792 - 12640
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  12792 ttgtttcattgctgttgattgtgcatataagttgggtctggttgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 12693  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||| ||| || |||||||| ||||| |||||||||||||||||||| |||||    
T  12692 acttctcttgtttgtttaagttgtccattgtctatgtttggtagagactttga 12640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 514592 - 514820
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  514592 ttgttttattgctattgaatgtgcttataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaact 514691  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| ||| || ||||| ||| ||| ||||  ||| |||||||| ||||| |    
T  514692 acttctcttgtttgtctggggtgtcctatatctatgtttggtagagattttgtggttgatttagtttgtttaccgttgacgggtatggatgtgatttttg 514791  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| |||||| |||||||||||    
T  514792 gaatgaattggttagagaataaccgagtt 514820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 441668 - 441568
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| |||||||||| |||| ||||| || ||||||||||||||||||||    
T  441668 atatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctctagtgtgtctaagatgtcctttatctatgtttggtagagattt 441569  T
Q  151 t 151  Q
    |    
T  441568 t 441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 496035 - 495935
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| |||| |||||| ||| | ||||||||||||||| |||||||    
T  496035 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtttttaagatgttctttgtctatgtttggtcgagattt 495936  T
Q  151 t 151  Q
    |    
T  495935 t 495935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 452666 - 452759
Alignment:
Q  215 gagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    ||||||||||  |||  ||| ||||||||||  |||| |||| ||||||||||| | ||||| |||||| |||| ||||| |||||||||||||    
T  452666 gagtataaccatgttcatattaattgttttagtaagacggtgtacttttcttctgctgaagaagagagtggagctgagttcctaactactaaac 452759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 11042 - 10775
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||  ||||||||| |||| | |||||||| ||||||    
T  11042 ttgtttcatttttttagaaagtgcatataagttgggtttgattgtatctgatatgaaaggagaaatacttgttgaaactccaactaagggttcagtaact 10943  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||  |||||||  | |||||||||||||| || |||| ||| || ||||| ||  | | ||||| ||| |||||||||||||| |    
T  10942 acttctcttgtttgtttggggtgtcctatatctatgtttggtagggactttgtggttgatttagtttgcttgccgttgtcgggtatggatgttatttttg 10843  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    | |||||||| ||||||||||||||||||  ||| || || ||||  |||| |||||| |||||||||    
T  10842 gaatgaattggttagagtataaccgagttcatatcaactgctttagtaagacggtgcatttttcttct 10775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 12025 - 11758
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || | ||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  12025 ttgtttcattgctgttgattgtgcatataagttgggtctggttatgtctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 11926  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || |||||||||||||||||||||||| | |||||||| ||  | || ||| | | ||||  ||| |||||||| ||||| |    
T  11925 acttctcttgtttgtttgagttgtccgttgtctatgtttggtagatactttgaggttgatcttgtttgtttgccgttgacgggtatggatgtaatttttg 11826  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || |||||||||||||| |||  ||| ||||| ||||  |||| ||| || |||||||||    
T  11825 ggatgaactggttagagtataaccgtgttcatattaattgctttagtaagacggtacatttttcttct 11758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 5246 - 4940
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || | |||||||||||||| |||||||||||||||| ||||||  ||| ||| ||||||    
T  5246 ttgtttcattgctgttgattgtgcatataagttgggtctggttatgtctgatatgaaaggagaaatggttgttgaaactccagctgaggtttcagtaact 5147  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    | || ||| || ||| |||| ||||||||||| |||||||||||||| ||||| |||||  | || ||| ||| ||||  ||| |||||||| ||||| |    
T  5146 atttctcttgtttgtctaagttgtccgttgtcaatgtttggtagagactttgaagtcgatcttgtttgtttaccgttgacgggtatggatgtaatttttg 5047  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaac 300  Q
    ||||||| || |||||||||||||| |||   || | ||| ||||  |||| |||||| ||||||||| | ||||| ||||||  ||| |||||  ||||    
T  5046 ggatgaactggttagagtataaccgtgttcacatcatttgctttagtaagacggtgcatttttcttctgctgaagaagagagtgaagctgagttcttaac 4947  T
Q  301 tactaaa 307  Q
    |||||||    
T  4946 tactaaa 4940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 30565 - 30786
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||| |||||||| ||||||    
T  30565 ttgtttcattgatattgaatgtgcatataagttgggtttggttgtatctgatatgaaaggggtaatggttgttgaaactccagctaagggttcagtaact 30664  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || |||||||||||||||||||||||||| |||| ||| || ||||| ||| | | ||||| ||| |       |||||| |    
T  30665 acttctcttgtttgtttgagttgtccgttgtctatgtttggtagagactttgtggttgatttagtttgtttgccgttgtcgggta-------tatttttg 30757  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||||||||||    
T  30758 gaatgaattggttagagtataaccgagtt 30786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 1054 - 1231
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | || |||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  1054 ttgttttattgctattgattgtgcatataagttgggtctggctgtatctgatatgaaaggagaaatggttgttgaaactccagctaagggttcagtaact 1153  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttg 178  Q
    |||| ||| || | | |||| |||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||    
T  1154 acttctcttgtttttctaagatgtccgttgtctatgtttggtagagactttgaagtcgacttagtttgtttaccgttg 1231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 29999 - 29730
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||   |||     
T  29999 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcaagaacc 29900  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| ||| || ||||| ||||| | ||||||||| |||||||| ||||| |    
T  29899 acttctcttgtttgtctggggtgtcctatatctatgtttggtagagattttgtggttgatttagtttgtctgccgttgttgggtatggatgtgatttttg 29800  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctac 270  Q
    | |||||||| | ||||||||| ||||||  ||| || || | ||  |||| |||||| |||||||||||    
T  29799 gaatgaattggtcagagtataatcgagttcatatcaactgctatagtaagacggtgcatttttcttctac 29730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 73 - 301
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||| |||| | |||||||  ||||||    
T  73 ttgtttcattgctttagaaagtgcatataagttgagtttgattgtatctgatatgaaaggagaaatggttgttgaaactccaactaagggtttagtaact 172  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||  |||||||  | |||||||||| ||| || |||| ||| || ||||| ||| | | ||||| ||| ||| |||| ||||| |    
T  173 acttctcttgtttgtttggggtgtcctatatctatgtttgttagggactttgtggtggatttagtttgtttgccgttgtcgggtatgaatgtgatttttg 272  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||||||||||    
T  273 gtatgaattggttagagtataaccgagtt 301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 526 - 298
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  ||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||    
T  526 ttgttttattgctattgaatgtgcttataagttgggtttggatgtatctgatatgaaaggggaaatggtcgttgaaactccagctaagggttcagtaact 427  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| ||| || ||||| ||| ||| ||||  ||| ||||| || ||||| |    
T  426 acttctcttgtttgtctggggtgtcctatatctatgtttggtagagattttgtggttgatttagtttgtttaccgttgacgggtatggaggtgatttttg 327  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||||||||||||||||    
T  326 gaatgaattggttagagtataaccgagtt 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 11874 - 11653
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  11874 ttgttttattgctattgaatgtgcatataagttgggtttggatgtatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 11775  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | |||||||||||||||||||||| | | || ||||| ||||| | ||||  ||| |||||||| ||||| |    
T  11774 acttctcttgtttgtctgcggtgtcctatatctatgtttggtagagattttgtgattgatttagtttgtctgccgttgacgggtatggatgtgatttttg 11675  T
Q  201 ggatgaattgattagagtataa 222  Q
    | |||||||| |||||||||||    
T  11674 gtatgaattggttagagtataa 11653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 29592 - 29327
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||  | || ||||||||||||||||||||| || | ||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  29592 ttgtttcattgcagttgattgtgcatataagttgggtctggttatgtctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 29493  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    ||||  || || ||||| || ||||| |||||||||||||||||||| |||||||| ||  | || ||| | | ||||  ||| |||||||| || || |    
T  29492 acttcacttgtttgtttgagttgtccattgtctatgtttggtagagactttgaggttgatcttgtatgtttgccgttgacgggtatggatgtaatctttg 29393  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttctt 266  Q
    ||||||| || |||||||||||||| |||  ||| ||||||||||  |||||||| || |||||||    
T  29392 ggatgaactggttagagtataaccgtgttcatattaattgttttagtaagatggtacatttttctt 29327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 268
Target Start/End: Complemental strand, 5646 - 5400
Alignment:
Q  22 tgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaagg 121  Q
    ||||||||||||||||||| || | ||||||||||| || |||||||||||||||| |||||| |||||||  |||||||||| |||  | ||||| |      
T  5646 tgcatataagttgggtctggttatgtctgatatgaatggagaaatggttgttgaaactccagctaagggtttagtaactacttctcttatttgtttgact 5547  T
Q  122 tgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtata 221  Q
    |||||||||||||||||||||||||| ||||| ||| |  |||| ||| | | ||||| ||| |||||||| ||||| ||||||||||| ||||||||||    
T  5546 tgtccgttgtctatgtttggtagagactttgaagtcaatctagtatgtttgccgttgtcgggcatggatgtaatttttgggatgaattggttagagtata 5447  T
Q  222 accgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    |||| |||  ||| ||||| ||||  |||| ||| || |||||||||    
T  5446 accgtgttcatattaattgctttagtaagacggtacatttttcttct 5400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 4128 - 4395
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||| || | ||   |||||  || |||||||||||||||| |||||| |||||||| ||||||    
T  4128 ttgtttcattgctgttgattgtgcatataagttgggtctggttatgtcaagtatgagtggagaaatggttgttgaaactccagctaagggttcagtaact 4227  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || |||||||| ||||  |||||||||||||||||||| | ||| || ||  |||| ||| ||| |||   ||| |||||||| ||||| |    
T  4228 acttatcttgtttgtttaagatgtcaattgtctatgtttggtagagaatatgaagtagaaatagtatgtttaccgttaaagggtatggatgtaatttttg 4327  T
Q  201 ggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttct 268  Q
    ||||||| || |||||||||||||| |||  ||| ||||||||||  |||| ||| ||||||||||||    
T  4328 ggatgaactggttagagtataaccgtgttcatatcaattgttttagtaagacggtacacttttcttct 4395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 1530 - 1755
Alignment:
Q  20 tgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaa 119  Q
    |||||||||||||||||||||||| | ||||||||||| || |||||||||||||||| |||||| |||||||| |||| ||||| ||| || ||||| |    
T  1530 tgtgcatataagttgggtctgattatgtctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaattacttctcttgtttgtttga 1629  T
Q  120 ggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    | ||||| |||||||||||||||||||| ||||| || ||  | || ||| | | ||||  ||| |||||||| || || ||||||||||| ||||| ||    
T  1630 gttgtccattgtctatgtttggtagagactttgaagttgatcttgtatgtttgccgttgacgggtatggatgtaatctttgggatgaattggttagaata 1729  T
Q  220 taaccgagtttgtataaattgtttta 245  Q
    |||||| |||  ||| ||||||||||    
T  1730 taaccgtgttcatattaattgtttta 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 28543 - 28768
Alignment:
Q  20 tgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaa 119  Q
    |||||||||||||||||||||||| | ||||||||||| || |||||||||||||||| |||||| |||||||| |||| ||||| ||| || ||||| |    
T  28543 tgtgcatataagttgggtctgattatgtctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaattacttctcttgtttgtttga 28642  T
Q  120 ggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    | ||||| |||||||||||||||||||| ||||| || ||  | || ||| | | ||||  ||| |||||||| || || ||||||||||| ||||| ||    
T  28643 gttgtccattgtctatgtttggtagagactttgaagttgatcttgtatgtttgccgttgacgggtatggatgtaatctttgggatgaattggttagaata 28742  T
Q  220 taaccgagtttgtataaattgtttta 245  Q
    |||||| |||  ||| ||||||||||    
T  28743 taaccgtgttcatattaattgtttta 28768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 11893 - 11672
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||||||||  | | |||||  || |||||||||||||||| |||||| ||||||||  |||||    
T  11893 ttgtttcattgctattgattgtgcatataagttgggtctgattgt--caggtatgagtggagaaatggttgttgaaactccagctaagggttcaataact 11796  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||||||||||| || ||  | || ||| | ||||||| ||| |||||||| ||||| |    
T  11795 acttctcttgtttgtttgagttgtcctttgtctatgtttggtagagattttgaagttgatcttgtatgtttgctgttgtcgggtatggatgtaatttttg 11696  T
Q  201 ggatgaattgattagagtataacc 224  Q
    ||||||| || || ||||||||||    
T  11695 ggatgaactggttggagtataacc 11672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 41800 - 41572
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | |||||||| |||||||||||| ||  | ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||     
T  41800 ttgttttattgctattgaatgtgcttataagttgggtttggatatatctgatatgaaaggggaaatggttgttgaaactccagctaagggttcagtaacc 41701  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||| |  |||||||  | || ||||||||||| ||||||| | | || ||||| ||||| | ||||  ||| ||||||||||| || |    
T  41700 acttctcttgtttgtctgcggtgtcccatatccatgtttggtagggattttgtgattgatttagtttgtctgccgttgacgggtatggatgttatctttg 41601  T
Q  201 ggatgaattgattagagtataaccgagtt 229  Q
    | |||||||| ||||| ||||| ||||||    
T  41600 gtatgaattggttagaatataatcgagtt 41572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 39 - 283
Target Start/End: Original strand, 3447 - 3691
Alignment:
Q  39 tgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtt 138  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||| |||||||| || ||||||| ||| || ||||| || |||||  | ||||||||    
T  3447 tgattgtatctgatatgaaaggagaaatggtcgttgaaactccagctaagggttcagtgactacttctcttgtttgtttgagatgtcctatatctatgtt 3546  T
Q  139 tggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaat 238  Q
    |||||| |||||||| || |||||||| ||  |||   ||   || |||||||| || || ||||||||||| |||||||||||| |||||  ||| ||     
T  3547 tggtagggattttgaagtagacttagtttgcttaccactgacagggatggatgtgatatttgggatgaattggttagagtataactgagttcatatcaac 3646  T
Q  239 tgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    || |||| |||||  ||||| ||||||||| | ||||| ||||||    
T  3647 tgctttagcaagaccgtgcatttttcttctgctgaagaagagagt 3691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 43658 - 43882
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| || | ||||||||||| ||  ||||||||||||||| |||||| |||||||  ||||||    
T  43658 ttgtttcattgttgttgattgtgcatataagttgggtctggttatgtctgatatgaatggaaaaatggttgttgaaactccagctaagggtttagtaact 43757  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| ||| || ||||| || ||||| |||||||||||||||||| | |||||  ||||  |||| ||| | |  |||  ||| ||| |||| ||||| |    
T  43758 acttctcttgtttgtttgagttgtccattgtctatgtttggtagatactttgaactcgatctagtatgtttgccattgacgggtatgaatgtaatttttg 43857  T
Q  201 ggatgaattgattagagtataaccg 225  Q
    ||||||| || ||||||||||||||    
T  43858 ggatgaactggttagagtataaccg 43882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 25216 - 25090
Alignment:
Q  66 tggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagt 165  Q
    ||||||| |||| || ||| ||||||||  ||||||||| | | || ||||| || |||||||||||||||| ||||||||||||||||||  |||| ||    
T  25216 tggttgtcgaaactcgagctaagggttcgataactacttctttggtttgtttgagttgtccgttgtctatgtatggtagagattttgaggttaacttggt 25117  T
Q  166 gtgtctactgttgttgggaatggatgt 192  Q
     ||| ||| ||||  ||||||||||||    
T  25116 ttgtttaccgttgacgggaatggatgt 25090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6496 - 6599
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| || |||||||| || |||    
T  6496 ttgtttcattgctttagaaagtgcttataagttgggtttgattgtatctgatatgaaaggagaaatggttgttgaaactccggctaagggttcagtgact 6595  T
Q  101 actt 104  Q
    ||||    
T  6596 actt 6599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1786 - 1565
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||| | | || ||||||||||||||||||||| || | ||||||||||| || ||||||||| |||||| |||||| |||||||| ||||||    
T  1786 ttgtttcattgttgttgattgtgcatataagttgggtctggttatgtctgatatgaatggagaaatggttcttgaaactccagctaagggttcagtaact 1687  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcg 200  Q
    |||| | |  | ||||| || | |||  ||||||||||||||||||| ||||| |||||  |||| ||| | | |||   ||| |||||||| ||||| |    
T  1686 acttcttttctttgtttgagttttccactgtctatgtttggtagagactttgaagtcgatctagtatgtttgccgttaacgggtatggatgtaatttttg 1587  T
Q  201 ggatgaattgattagagtataa 222  Q
    ||||||| || |||||||||||    
T  1586 ggatgaactggttagagtataa 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4543 - 4659
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||| | || ||||||||||||| || |||||||||||||||| |||||| |||||||| ||||||    
T  4543 ttgtttcattgctgttgattgtgcatataagttgggtcgggttatatctgatatgaatggagaaatggttgttgaaactccagctaagggttcagtaact 4642  T
Q  101 acttttctagtgtgttt 117  Q
    |||| |||||| |||||    
T  4643 acttctctagtatgttt 4659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 4663 - 4733
Alignment:
Q  175 gttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgtttta 245  Q
    ||||| ||| |||||||| ||||| |||||||| || |||||||||||||| |||  ||| ||||||||||    
T  4663 gttgtcgggtatggatgtaatttttgggatgaactggttagagtataaccgtgttcatattaattgtttta 4733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 308
Target Start/End: Complemental strand, 3647 - 3476
Alignment:
Q  137 tttggtagagattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataa 236  Q
    ||||||||||| ||||| |||||| |||| ||| ||| ||||  ||| |||||||| ||||| |||||||| || ||||||||||||||||||  ||| |    
T  3647 tttggtagagactttgaagtcgacctagtttgtttaccgttgacgggtatggatgtaatttttgggatgaactggttagagtataaccgagttcatatca 3548  T
Q  237 attgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    |||  |||| ||||| |||||| ||||||||| | ||||| |||||| |||| ||||| |||||||||||||    
T  3547 attactttagcaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctaactactaaac 3476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 36517 - 36314
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| ||||||||||||||| | |    
T  36517 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttgtctatgtttggtcgtg 36418  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | ||  |||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  36417 attttgaaatggatctagtttgtctacctttgagcggtatggatgtgattcttggtatgaattggttagagtacaaccatgttcatattaattgttttag 36318  T
Q  247 caag 250  Q
    ||||    
T  36317 caag 36314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4328 - 4480
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    ||||||||||||| | || ||||||||||||||||||||  || | ||   |||||  || |||||||||||||||| |||||| |||||||| ||||||    
T  4328 ttgtttcattgctgttgattgtgcatataagttgggtctacttatgtcaagtatgagtggagaaatggttgttgaaactccagctaagggttcagtaact 4427  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||| | | || ||||| || ||||| |||||||||||||||||||| |||||    
T  4428 acttcttttgtttgtttgagttgtcctttgtctatgtttggtagagactttga 4480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 8969 - 8862
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| ||||||||||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  8969 tctgatatgaatggagaaatggttgtcgaaactccagccaagggttcagtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgattgtg 8870  T
Q  147 attttgag 154  Q
    ||||||||    
T  8869 attttgag 8862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 9640 - 9743
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| |||||||||| |||| ||||| || ||||||||||||||||||||    
T  9640 atatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctctagtgtgtctaagatgtcctttatctatgtttggtagagattt 9739  T
Q  151 tgag 154  Q
    ||||    
T  9740 tgag 9743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 23587 - 23690
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||| |  ||||||| ||| ||||||||||| ||||  || ||||||||||||||||||||    
T  23587 atatgaatggagaaatggttgtcgaaactccagctaagggttcggcgactacttctcttgtgtgtttaagatgtcatttatctatgtttggtagagattt 23686  T
Q  151 tgag 154  Q
    ||||    
T  23687 tgag 23690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9260 - 9333
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttg 74  Q
    ||||||||||||| | |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  9260 ttgtttcattgctattgaatgtgcttataagttgggtcaggttgtatctgatatgaaaggggaaatggttgttg 9333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 47955 - 48060
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaacta 302  Q
    ||||| || ||||||||||||||||||  ||| ||||||||||  |||| |||||| ||||||||||||||||| |||||| ||||||||||  ||||||    
T  47955 atgaactggttagagtataaccgagttcatatcaattgttttagtaagacggtgcatttttcttctacggaagaagagagtggagcagagttcttaacta 48054  T
Q  303 ctaaac 308  Q
    ||||||    
T  48055 ctaaac 48060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 11488 - 11382
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  11488 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtatgtttgaaatgtcctttgtctatgtttggtcgtg 11389  T
Q  147 attttga 153  Q
    |||||||    
T  11388 attttga 11382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 17956 - 17850
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  17956 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtatgtttgaaatgtcctttgtctatgtttggtcgtg 17857  T
Q  147 attttga 153  Q
    |||||||    
T  17856 attttga 17850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17943 - 17791
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | || ||||| | |||||||||||| | | | ||  ||||||| |||||||||||||| |||| |||||| |||||||  || |||    
T  17943 ttgttttattgctgttgattgtgcgtctaagttgggtcttactatgtcgaatatgaatggggaaatggttgtcgaaactccagctaagggtttggtgact 17844  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||| ||| ||||||||||| ||||| ||||||||||||||| |||| |||||    
T  17843 acttctcttgtgtgtttaagatgtcctttgtctatgtttggtcgagactttga 17791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 663 - 770
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| |||||| ||||||||||| |||||||  || ||||||||||| ||||| ||||||||||||| | | |    
T  663 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttctgtgactacttcacttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 762  T
Q  147 attttgag 154  Q
    ||||||||    
T  763 attttgag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 11165 - 11272
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  11165 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 11264  T
Q  147 attttgag 154  Q
    ||||||||    
T  11265 attttgag 11272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 2529 - 2655
Alignment:
Q  28 taagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccg 127  Q
    ||||||||||||  || | ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| |||||     
T  2529 taagttgggtcttgttatgtctgatatgaatggagacatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcct 2628  T
Q  128 ttgtctatgtttggtagagattttgag 154  Q
    ||||||||||||| | | |||||||||    
T  2629 ttgtctatgtttgatcgtgattttgag 2655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 6888 - 6786
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||  || ||||||| ||| ||||||||||| ||||| ||||||||||||||| |||||||    
T  6888 atatgaatggagaaatggttgtcgaaactccagctaagggtttggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttggtcgagattt 6789  T
Q  151 tga 153  Q
    |||    
T  6788 tga 6786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 14018 - 13916
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||  || ||||||| ||| ||||||||||| ||||| ||||||||||||||| |||||||    
T  14018 atatgaatggagaaatggttgtcgaaactccagctaagggtttggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttggtcgagattt 13919  T
Q  151 tga 153  Q
    |||    
T  13918 tga 13916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 15218 - 15371
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||| | || ||||| | |||||||||||| | | | ||  ||||||| || ||||||||||| |||| |||||| |||||||| || |||    
T  15218 ttgttttattgctcttgattgtgcttctaagttgggtcttactatgtcaaatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgact 15317  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttgag 154  Q
    |||| | ||||||||||||| | ||| || ||||||||||||||| ||||||||    
T  15318 acttctttagtgtgtttaagatatcctttatctatgtttggtagatattttgag 15371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 57917 - 58005
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||||| ||||||||||    
T  57917 atggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttggtcgagattttga 58005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 19075 - 19166
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtt 294  Q
    |||||||| ||| ||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| | ||||| |||||| ||||||||||    
T  19075 atgaattggttacagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagcagagtt 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 8242 - 8135
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  8242 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 8143  T
Q  147 attttgag 154  Q
    ||||||||    
T  8142 attttgag 8135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 14555 - 14657
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| |||| |||||| ||||| ||||||||||||||| |||||||    
T  14555 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtatttaagatgtcctttgtctatgtttggtcgagattt 14654  T
Q  151 tga 153  Q
    |||    
T  14655 tga 14657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 18669 - 18563
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |    
T  18669 tctgatatgaacggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtgtgtttaagatgtcctttgtctatgtttgattgtg 18570  T
Q  147 attttga 153  Q
    |||||||    
T  18569 attttga 18563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 26367 - 26265
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| |||||||||| |||| ||||| || |||||||||||| |||| ||    
T  26367 atatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctctagtgtgtctaagatgtcctttatctatgtttggtcgagactt 26268  T
Q  151 tga 153  Q
    |||    
T  26267 tga 26265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 173
Target Start/End: Original strand, 37103 - 37231
Alignment:
Q  45 tatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtag 144  Q
    ||||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| |    
T  37103 tatctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgatatgtcctttgtctatgtttggtcg 37202  T
Q  145 agattttgaggtcgacttagtgtgtctac 173  Q
     |||||  || | |||||||| |||||||    
T  37203 tgatttcaagatggacttagtttgtctac 37231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 219
Target Start/End: Original strand, 10443 - 10615
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    |||| |||||| || || |||||||| |||| |||||| |||||||| |||||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  10443 tctggtatgaatggagagatggttgtcgaaactccagctaagggttcggtaactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 10542  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagta 219  Q
    |||||||| | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| ||||||||    
T  10543 attttgagatggatttagtttgtctacctttgagcggtatggatgtaattctgggtatgaattggttagagta 10615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 2037 - 1913
Alignment:
Q  28 taagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccg 127  Q
    |||||||||||| ||| | ||  ||||||| |||||||||||||| ||||  ||||| |||||||| || ||||||| | |||| || || | ||||||     
T  2037 taagttgggtcttattatgtcatatatgaatggggaaatggttgtcgaaaccccagctaagggttcggtgactacttctttagtatgcttgaagtgtcct 1938  T
Q  128 ttgtctatgtttggtagagattttg 152  Q
    ||||| |||||||||||||||||||    
T  1937 ttgtcgatgtttggtagagattttg 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 1317 - 1520
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  1317 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 1416  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||| | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| ||| |||| ||||  |||  ||| ||||||||||     
T  1417 attttgagatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttacagtacaaccatgttcatatcaattgttttag 1516  T
Q  247 caag 250  Q
    ||||    
T  1517 caag 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 10387 - 10184
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  10387 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 10288  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || ||||| || |||||||| ||||  |||| ||| ||||||||||     
T  10287 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattctgggtatgaactggttagagtacaaccacgtttttattaattgttttag 10188  T
Q  247 caag 250  Q
    ||||    
T  10187 caag 10184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 2004 - 1901
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |||||    
T  2004 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtgattt 1905  T
Q  151 tgag 154  Q
    ||||    
T  1904 tgag 1901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 24997 - 25104
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| || ||||| | ||| ||||||||||| ||||| || |||||||||| | | |    
T  24997 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacatctcttgtgtgtttaagatgtcctttatctatgtttgatcgtg 25096  T
Q  147 attttgag 154  Q
    ||||||||    
T  25097 attttgag 25104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 41174 - 40971
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  41174 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 41075  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||   ||  ||||||||||||||     
T  41074 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattttgggtatgaactggttagagtacaaccacattcttataaattgttttag 40975  T
Q  247 caag 250  Q
    ||||    
T  40974 caag 40971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 44; Significance: 5e-16; HSPs: 5)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 10523 - 10726
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| ||  ||||||||||| | |    
T  10523 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttaactatgtttggtcgtg 10622  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||||||||||||||     
T  10623 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattatgggtatgaattggttagagtacaaccatgttcatataaattgttttag 10722  T
Q  247 caag 250  Q
    ||||    
T  10723 caag 10726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 54652 - 54549
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| |||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| || |||||||||| | | |||||    
T  54652 atatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttttctatgtttgatcgtgattt 54553  T
Q  151 tgag 154  Q
    ||||    
T  54552 tgag 54549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 250
Target Start/End: Complemental strand, 31900 - 31699
Alignment:
Q  49 tgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagat 148  Q
    ||||||||| || || |||||||| |||| |||||| |||||||| |||||||||| ||| || ||||| |  ||||| ||||||||||||||| | |||    
T  31900 tgatatgaatggagagatggttgtcgaaactccagctaagggttcggtaactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgat 31801  T
Q  149 tttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaaca 248  Q
    |||||  | || ||||| |||||||  |||   ||  ||||||| ||| | || |||||||| |||||||| ||||  |||  ||| |||||||||| ||    
T  31800 tttgatatggatttagtttgtctacctttgagcggtttggatgtgattctaggtatgaattggttagagtacaaccatgttcatattaattgttttagca 31701  T
Q  249 ag 250  Q
    ||    
T  31700 ag 31699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 13178 - 13381
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||  | ||||| ||  ||||||||||| | |    
T  13178 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcgatgtcctttaactatgtttggtcgtg 13277  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||||||||||||||     
T  13278 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattatgggtatgaattggttagagtacaaccatgttcatataaattgttttag 13377  T
Q  247 caag 250  Q
    ||||    
T  13378 caag 13381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 250
Target Start/End: Complemental strand, 37366 - 37165
Alignment:
Q  49 tgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagat 148  Q
    ||||||||| || || |||||||| |||| |||||| ||||||||||| ||||||| |||  | ||||| |  ||||| ||||||||||||||| | |||    
T  37366 tgatatgaatggagagatggttgtcgaaactccagctaagggttctgttactacttctctcttatgtttgaaatgtcctttgtctatgtttggtcgtgat 37267  T
Q  149 tttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaaca 248  Q
    |||||  | || ||||| |||||||  |||   ||  ||||||| ||| | || |||||||| |||||||| ||||  |||  ||| |||||||||| ||    
T  37266 tttgatatggatttagtttgtctacctttgagcggtttggatgtgattctaggtatgaattggttagagtacaaccatgttcatattaattgttttagca 37167  T
Q  249 ag 250  Q
    ||    
T  37166 ag 37165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 22266 - 22063
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |    
T  22266 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 22167  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||||| || ||||| || |||||||| ||||  |||  ||| ||||||||||     
T  22166 attttgaaatggatttagtttgtctacctttgagtggtatggatgtgattttgggtatgaactggttagagtacaaccacgttcttattaattgttttag 22067  T
Q  247 caag 250  Q
    ||||    
T  22066 caag 22063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 15437 - 15335
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    |||||||||| || |||||||| |||| |||| | |||||||| || ||||||| ||| ||||||||||| ||||| ||||||| | ||||| |||||||    
T  15437 atatgaaaggagagatggttgtcgaaactccaactaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctacgattggtcgagattt 15338  T
Q  151 tga 153  Q
    |||    
T  15337 tga 15335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 21482 - 21576
Alignment:
Q  59 ggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    |||||||||||||| |||| |||||| |||||||| || ||||||| |||||||||| | | ||||||||| || ||||||||| |||| |||||    
T  21482 ggggaaatggttgtcgaaactccagctaagggttcggtgactacttctctagtgtgtctgaagtgtccgttctcgatgtttggtcgagactttga 21576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 104242 - 104140
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||  |||||||||| ||| ||||||||||| ||||| ||||||||||||| | | |||||    
T  104242 atatgaatggagagatggttgtcgaaactccagctaagggttaggtaactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtgattt 104143  T
Q  151 tga 153  Q
    |||    
T  104142 tga 104140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 8429 - 8336
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    ||||||||||| || ||||||||||| |||| |||||  |||||||| || ||||||| ||| |||||||| || ||||| |||||||||||||    
T  8429 tctgatatgaatggagaaatggttgtcgaaactccagttaagggttcggtgactacttctcttgtgtgtttgagatgtcctttgtctatgtttg 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 926 - 1031
Alignment:
Q  203 atgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaacta 302  Q
    ||||| || ||||||||||||||||||  ||| ||||| |||  ||||| |||||| ||||||||| ||||||| |||||| |||| ||||| ||| |||    
T  926 atgaactggttagagtataaccgagttcatatcaattgcttttgcaagacggtgcatttttcttctgcggaagaagagagtggagcggagttcctatcta 1025  T
Q  303 ctaaac 308  Q
    ||||||    
T  1026 ctaaac 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 250
Target Start/End: Original strand, 29211 - 29416
Alignment:
Q  45 tatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtag 144  Q
    ||||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| || |||||||||||| |    
T  29211 tatctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttatctatgtttggtcg 29310  T
Q  145 agattttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgtttt 244  Q
     ||||||||  | || ||||| |||||||  |||   || |||||||| ||| | |  |||||||| |||||||| ||||  |||  ||| |||||||||    
T  29311 tgattttgaaatggatttagtttgtctacatttgagcggtatggatgtgattctggatatgaattggttagagtacaaccatgttcatatcaattgtttt 29410  T
Q  245 aacaag 250  Q
    | ||||    
T  29411 agcaag 29416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 159
Target Start/End: Complemental strand, 4449 - 4341
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||| | |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | |||||    
T  4449 atatgaatggagagatggttgtcgaaactccatctaagggttcggtgactacttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtgattt 4350  T
Q  151 tgaggtcga 159  Q
    |||| ||||    
T  4349 tgagatcga 4341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 13768 - 13868
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| ||| |||| || ||||||| ||| ||||| ||||| ||||| ||||||||||||||| |||||||    
T  13768 atatgaatggagagatggttgtcgaaactccagctaagagttcggtgactacttctcttgtgtgattaagatgtccattgtctatgtttggtcgagattt 13867  T
Q  151 t 151  Q
    |    
T  13868 t 13868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 5524 - 5620
Alignment:
Q  212 ttagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    ||||||||||||||||||  ||| ||||| |||| ||||| |||||| ||||||||| | ||||| |||||| |||| ||||| ||| |||||||||    
T  5524 ttagagtataaccgagttcatatcaattgctttagcaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctatctactaaac 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 55736 - 55848
Alignment:
Q  28 taagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccg 127  Q
    |||||||||||| | | | ||| ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| ||||| ||||| |||||     
T  55736 taagttgggtcttactatgtctaatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctcttgtgtgattaagatgtcct 55835  T
Q  128 ttgtctatgtttg 140  Q
    |||||||||||||    
T  55836 ttgtctatgtttg 55848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 8277 - 8074
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || |||||    ||||||||||||||||||||| | |    
T  8277 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgcattgtccgttgtctatgtttggtcgtg 8178  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| || ||||| ||||  |||  ||| ||||||||||     
T  8177 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttggagtacaaccatgttcatattaattgttttag 8078  T
Q  247 caag 250  Q
    ||||    
T  8077 caag 8074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 17179 - 16976
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| ||||||||  | ||||||| ||| || |||||||| || || || ||||||||| || | |    
T  17179 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcgatgactacttctctcgtatgtttaagatgccctttatctatgtttagtcgtg 17080  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||| |||  ||| ||||||||||     
T  17079 attttgaaatggatttagtttgtctacctttgagcggtatggatgtgattctgggtatgaattggttagagtacaaccgtgttcatatcaattgttttag 16980  T
Q  247 caag 250  Q
    ||||    
T  16979 caag 16976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 3443 - 3348
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggt 142  Q
    ||||||||||| || || |||||||| |||| |||||| ||||||||  | ||||||| ||| || ||||| |  ||||| |||||||||||||||    
T  3443 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcgatgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggt 3348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 17351 - 17554
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| || |||||||||||| | |    
T  17351 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgagatgtcctttatctatgtttggtcgtg 17450  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  | || ||||| |||||||  |||   |  |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  17451 attttgaaatggatttagtttgtctacctttgagcgatatggatgtgattcttggtatgaattggttagagtacaaccatgttcatatcaattgttttag 17550  T
Q  247 caag 250  Q
    ||||    
T  17551 caag 17554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 24321 - 24220
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || ||||||||||| ||||  || || |||||||| || ||||||| |||||| ||  | | |||||| ||||| |||||||||||||||||    
T  24321 atatgaatggagaaatggttgtcgaaaccccggctaagggttcagtgactacttctctagtatgcctgaagtgtcctttgtcgatgtttggtagagattt 24222  T
Q  151 tg 152  Q
    ||    
T  24221 tg 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 195077 - 195217
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || ||||| | ||  ||||||||  || | ||||||||||  || || || ||||| |||| |||||| |||||||| || |||    
T  195077 ttgttttattgctttcgattgtgcttctactttgggtcttgttatgtctgatatgattggagagatagttgtcgaaactccagctaagggttcggtgact 195176  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttgg 141  Q
    |||| ||| || ||||| |  ||||| ||||||||||||||    
T  195177 acttctctcgtatgtttgaaatgtcctttgtctatgtttgg 195217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2111 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 10 - 108
Alignment:
Q  185 atggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagt 283  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||  ||| || || ||||||||||  || || ||||||||| | ||||| ||||||    
T  10 atggatgttatatttgggatgaattggttagagtataaccgagttcatatcaactgctttaacaagaccgtacatttttcttctgccgaagaagagagt 108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 3620 - 3514
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| | |||| |||| ||| ||||||| || ||| ||||||||||| ||||| ||||||||||||| | | |    
T  3620 tctgatatgaatggagagatggttgtcgaaactgcagctaaggtttcggtaactatttctcttgtgtgtttaagatgtcctttgtctatgtttgatcgtg 3521  T
Q  147 attttga 153  Q
    |||||||    
T  3520 attttga 3514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2087 - 2132
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgta 46  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  2087 ttgtttcattgctttagagtgtgcatataagttgggtttgattgta 2132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 202 - 113
Alignment:
Q  219 ataaccgagtttgtataaattgttttaacaagatggtgcacttttcttctacggaagatgagagtcgagcagagtttctaactactaaac 308  Q
    |||||||||||  ||| ||||| |||||||||| |||||| ||||||||| | ||||| |||||| |||| ||||| ||| |||||||||    
T  202 ataaccgagttcatatcaattgctttaacaagacggtgcatttttcttctgctgaagaagagagtggagctgagttcctatctactaaac 113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 41633 - 41545
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    ||||||||  ||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | ||||||||    
T  41633 atggttgtcaaaactccagctaagggttcggtgactacttctctcgtgtgtttaagatgtcctttgtctatgtttgatcgtgattttga 41545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 75353 - 75265
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattttga 153  Q
    ||||||||  ||| |||||| |||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||||| | | ||||||||    
T  75353 atggttgtcaaaactccagctaagggttcggtgactacttctctcgtgtgtttaagatgtcctttgtctatgtttgatcgtgattttga 75265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 35000 - 35106
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||| | ||| || ||||| |  ||||| ||||||||||||||| | |    
T  35000 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacgtctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtg 35099  T
Q  147 attttga 153  Q
    |||||||    
T  35100 attttga 35106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 1001 - 894
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||||| |||| |||||| |||||||| || ||||||| | | || || |||| |||||| ||||||||||||| | | |    
T  1001 tctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctgtcgtatgcttaaagtgtcctttgtctatgtttgatcgtg 902  T
Q  147 attttgag 154  Q
    ||||||||    
T  901 attttgag 894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 12678 - 12575
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagagattt 150  Q
    ||||||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  ||||| ||||||||||||||| | |||||    
T  12678 atatgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttctctcgtatgtttgaaatgtcctttgtctatgtttggtcgtgattt 12579  T
Q  151 tgag 154  Q
    ||||    
T  12578 tgag 12575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14149 - 14010
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || |||||   ||||||||||||   | | ||||||||||| || || |||||||| |||| |||||| |||||||| || |||    
T  14149 ttgttttattgcttttgattgtgctactaagttgggtcttgctatgtctgatatgaatggagagatggttgtcgaaactccagctaagggttcggtgact 14050  T
Q  101 acttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    |||| ||| || |||||||| ||| | |||||||| ||||    
T  14049 acttctcttgtatgtttaagatgttctttgtctatttttg 14010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 8042 - 8117
Alignment:
Q  65 atggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    |||||||| |||| |||||| |||||||| || |  |||| ||| ||||||||||| ||||| |||||||||||||    
T  8042 atggttgtcgaaactccagctaagggttcggtgaaaacttctcttgtgtgtttaagatgtcctttgtctatgtttg 8117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 11641 - 11844
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    ||||||||||| || || |||||| || ||| |||||| |||||||| || ||||||| ||| || ||||| || ||||| || ||||||||| || | |    
T  11641 tctgatatgaatggagatatggttttttaaactccagctaagggttcggtgactacttgtctcgtatgtttgagatgtcctttatctatgtttagtcgtg 11740  T
Q  147 attttgaggtcgacttagtgtgtctactgttgttgggaatggatgttattttcgggatgaattgattagagtataaccgagtttgtataaattgttttaa 246  Q
    |||||||  |  | ||||| |||||||  |||   || |||||||| ||| | || |||||||| |||||||| ||||  |||  ||| ||||||||||     
T  11741 attttgaaatgaatttagtttgtctacccttgagcggtatggatgtgattatgggtatgaattggttagagtacaaccatgttcatatcaattgttttag 11840  T
Q  247 caag 250  Q
    ||||    
T  11841 caag 11844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19208 - 19262
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatg 55  Q
    ||||||||||||| | |||||||| |||||||||||| || ||||||||| ||||    
T  19208 ttgtttcattgctattgaatgtgcttataagttgggtttggttgtatctgttatg 19262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40746 - 40864
Alignment:
Q  1 ttgtttcattgctttagaatgtgcatataagttgggtctgattgtatctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaact 100  Q
    |||||| |||||||| || |||||   ||||||||||||  || | ||| ||||||| || || |||||||| |||| |||| | |||||||| || |||    
T  40746 ttgttttattgcttttgattgtgctactaagttgggtcttgttatgtctaatatgaatggagagatggttgtcgaaactccaactaagggttcggtgact 40845  T
Q  101 acttttctagtgtgtttaa 119  Q
    |||| ||| ||||||||||    
T  40846 acttctcttgtgtgtttaa 40864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 21623 - 21497
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    |||||| |||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  | ||| ||||||||||||||| | |    
T  21623 tctgatttgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttatctcgtatgtttgaaatttcctttgtctatgtttggtcgtg 21524  T
Q  147 attttgaggtcgacttagtgtgtctac 173  Q
    |||| ||| | || ||||| |||||||    
T  21523 atttcgagatggatttagtttgtctac 21497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 37047 - 36921
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttggtagag 146  Q
    |||||| |||| || || |||||||| |||| |||||| |||||||| || ||||||| ||| || ||||| |  | ||| ||||||||||||||| | |    
T  37047 tctgatttgaatggagagatggttgtcgaaactccagctaagggttcggtgactacttatctcgtatgtttgaaatttcctttgtctatgtttggtcgtg 36948  T
Q  147 attttgaggtcgacttagtgtgtctac 173  Q
    |||| ||| | || ||||| |||||||    
T  36947 atttcgagatggatttagtttgtctac 36921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 4598 - 4509
Alignment:
Q  51 atatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactacttttctagtgtgtttaaggtgtccgttgtctatgtttg 140  Q
    ||||||| || || |||||||| |||| ||||||  ||||||| || |||||||  || |||||||||||  |||| |||||||||||||    
T  4598 atatgaatggagagatggttgtcgaaactccagctgagggttcggtgactacttcccttgtgtgtttaagaagtcctttgtctatgtttg 4509  T

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Target: scaffold0403 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 14930 - 14873
Alignment:
Q  47 tctgatatgaaaggggaaatggttgttgaaaatccagccaagggttctgtaactactt 104  Q
    ||||||||||| || ||||||||||| |||| |||||| |||||||| || |||||||    
T  14930 tctgatatgaatggagaaatggttgtcgaaactccagctaagggttcggtgactactt 14873  T

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