View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6971_low_18 (Length: 254)

Name: NF6971_low_18
Description: NF6971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6971_low_18
NF6971_low_18
[»] chr1 (57 HSPs)
chr1 (17-185)||(45874287-45874457)
chr1 (185-240)||(30414874-30414929)
chr1 (185-240)||(21446224-21446279)
chr1 (186-240)||(16252765-16252819)
chr1 (187-240)||(50460718-50460771)
chr1 (185-240)||(11121491-11121546)
chr1 (185-240)||(46903480-46903535)
chr1 (185-240)||(50797790-50797845)
chr1 (194-240)||(33111917-33111963)
chr1 (186-240)||(35030768-35030822)
chr1 (184-240)||(43757597-43757653)
chr1 (189-240)||(4618658-4618709)
chr1 (185-240)||(19427520-19427575)
chr1 (185-240)||(40596060-40596115)
chr1 (185-240)||(45272166-45272221)
chr1 (186-240)||(16836121-16836175)
chr1 (186-240)||(40139126-40139180)
chr1 (186-240)||(41507200-41507254)
chr1 (183-240)||(1603002-1603059)
chr1 (187-220)||(5574296-5574329)
chr1 (184-247)||(12972703-12972763)
chr1 (184-220)||(41564917-41564953)
chr1 (185-233)||(48028536-48028584)
chr1 (185-240)||(14983783-14983838)
chr1 (185-240)||(27687525-27687580)
chr1 (186-240)||(30196724-30196779)
chr1 (185-240)||(36954670-36954723)
chr1 (185-240)||(37741958-37742013)
chr1 (186-240)||(48256920-48256972)
chr1 (185-240)||(49453490-49453545)
chr1 (186-240)||(51718632-51718687)
chr1 (185-219)||(1100216-1100250)
chr1 (210-240)||(5574265-5574295)
chr1 (186-220)||(12990506-12990540)
chr1 (186-240)||(18336158-18336212)
chr1 (186-220)||(27954243-27954277)
chr1 (186-220)||(28457384-28457418)
chr1 (186-240)||(37690429-37690483)
chr1 (186-216)||(40118756-40118786)
chr1 (186-240)||(47398457-47398511)
chr1 (186-240)||(48872034-48872088)
chr1 (210-240)||(48962021-48962051)
chr1 (210-240)||(51728006-51728036)
chr1 (183-232)||(4857919-4857968)
chr1 (183-240)||(5975545-5975602)
chr1 (183-216)||(8577543-8577576)
chr1 (211-240)||(29638751-29638780)
chr1 (186-219)||(31244771-31244804)
chr1 (185-234)||(43612092-43612141)
chr1 (187-240)||(51571416-51571469)
chr1 (208-240)||(2827716-2827748)
chr1 (208-240)||(22674745-22674777)
chr1 (184-212)||(27563482-27563510)
chr1 (186-240)||(29094752-29094803)
chr1 (185-213)||(30535990-30536018)
chr1 (185-213)||(44672074-44672102)
chr1 (208-240)||(49615283-49615315)
[»] chr4 (65 HSPs)
chr4 (185-240)||(21766557-21766612)
chr4 (186-247)||(24310520-24310581)
chr4 (186-240)||(37731926-37731980)
chr4 (187-240)||(54848150-54848203)
chr4 (184-240)||(50980600-50980656)
chr4 (185-240)||(1868899-1868954)
chr4 (186-240)||(28899221-28899275)
chr4 (184-240)||(9827989-9828045)
chr4 (185-240)||(31413792-31413847)
chr4 (185-240)||(46686244-46686298)
chr4 (186-240)||(7795025-7795079)
chr4 (198-240)||(46799779-46799821)
chr4 (187-240)||(9095949-9096002)
chr4 (184-240)||(22007831-22007885)
chr4 (183-240)||(41347473-41347529)
chr4 (186-240)||(8614190-8614241)
chr4 (185-240)||(37022271-37022326)
chr4 (185-240)||(42490919-42490974)
chr4 (185-240)||(45678273-45678328)
chr4 (185-220)||(50291281-50291316)
chr4 (185-219)||(22893868-22893902)
chr4 (185-219)||(22945536-22945570)
chr4 (184-240)||(32294766-32294819)
chr4 (187-240)||(5386385-5386438)
chr4 (183-240)||(7161531-7161587)
chr4 (183-216)||(51107482-51107515)
chr4 (184-240)||(2109441-2109497)
chr4 (189-240)||(19815463-19815515)
chr4 (185-233)||(27384186-27384234)
chr4 (184-240)||(39605977-39606032)
chr4 (184-240)||(41010175-41010231)
chr4 (185-240)||(1728093-1728148)
chr4 (185-240)||(4511824-4511879)
chr4 (189-240)||(22072263-22072314)
chr4 (181-240)||(31657653-31657712)
chr4 (185-240)||(33776907-33776961)
chr4 (186-229)||(36871185-36871228)
chr4 (185-223)||(1015122-1015160)
chr4 (194-236)||(1627568-1627610)
chr4 (185-239)||(4106053-4106106)
chr4 (186-240)||(4974111-4974165)
chr4 (186-220)||(6256486-6256520)
chr4 (186-240)||(12387671-12387725)
chr4 (210-240)||(18944314-18944344)
chr4 (194-240)||(19232139-19232185)
chr4 (186-240)||(32365673-32365727)
chr4 (210-240)||(36364791-36364821)
chr4 (186-240)||(39241307-39241361)
chr4 (184-213)||(15638159-15638188)
chr4 (208-241)||(24235353-24235386)
chr4 (187-240)||(28676158-28676211)
chr4 (184-213)||(31559536-31559565)
chr4 (187-240)||(46791997-46792050)
chr4 (183-212)||(54801532-54801561)
chr4 (208-240)||(4577590-4577622)
chr4 (185-237)||(5234480-5234532)
chr4 (208-240)||(6126886-6126918)
chr4 (208-240)||(31318786-31318818)
chr4 (184-240)||(32621636-32621692)
chr4 (208-240)||(36110167-36110199)
chr4 (187-219)||(38960698-38960730)
chr4 (188-220)||(43307406-43307438)
chr4 (184-220)||(46355330-46355366)
chr4 (185-237)||(54036538-54036590)
chr4 (208-240)||(54803334-54803366)
[»] chr3 (45 HSPs)
chr3 (185-240)||(50745559-50745614)
chr3 (185-240)||(29846897-29846952)
chr3 (185-240)||(49361841-49361896)
chr3 (186-240)||(29057659-29057713)
chr3 (183-240)||(48490519-48490576)
chr3 (185-240)||(35368621-35368676)
chr3 (185-240)||(48117346-48117401)
chr3 (183-240)||(47683798-47683855)
chr3 (185-240)||(19149001-19149055)
chr3 (185-240)||(23906993-23907048)
chr3 (185-240)||(43220147-43220202)
chr3 (185-240)||(46952948-46953003)
chr3 (186-240)||(3484770-3484824)
chr3 (186-220)||(30664503-30664537)
chr3 (186-240)||(43149349-43149403)
chr3 (187-240)||(35554121-35554174)
chr3 (183-240)||(38957518-38957574)
chr3 (185-240)||(1765403-1765458)
chr3 (185-240)||(28700471-28700526)
chr3 (185-240)||(43169759-43169814)
chr3 (186-240)||(47484290-47484345)
chr3 (185-240)||(55361239-55361294)
chr3 (210-240)||(1402685-1402715)
chr3 (185-219)||(9159074-9159108)
chr3 (186-220)||(14839082-14839116)
chr3 (183-213)||(19150363-19150393)
chr3 (186-240)||(26548780-26548834)
chr3 (210-240)||(29555844-29555874)
chr3 (186-216)||(48205045-48205075)
chr3 (183-237)||(50876371-50876425)
chr3 (183-240)||(11056928-11056985)
chr3 (185-240)||(21481777-21481829)
chr3 (183-212)||(27646495-27646524)
chr3 (187-220)||(44689793-44689826)
chr3 (184-220)||(2280175-2280211)
chr3 (184-216)||(7351679-7351711)
chr3 (208-240)||(9557928-9557960)
chr3 (184-240)||(11404966-11405022)
chr3 (185-213)||(27198204-27198232)
chr3 (185-213)||(38359350-38359378)
chr3 (185-213)||(39901590-39901618)
chr3 (184-220)||(41112109-41112144)
chr3 (181-240)||(42718126-42718186)
chr3 (184-220)||(42888809-42888845)
chr3 (184-240)||(50146486-50146542)
[»] chr8 (49 HSPs)
chr8 (186-240)||(6243045-6243099)
chr8 (185-240)||(25430656-25430711)
chr8 (186-240)||(37471654-37471708)
chr8 (185-240)||(13924021-13924076)
chr8 (185-240)||(43590704-43590759)
chr8 (186-240)||(41776186-41776240)
chr8 (184-240)||(7010683-7010739)
chr8 (188-236)||(8233506-8233554)
chr8 (186-237)||(36675336-36675387)
chr8 (185-240)||(37392134-37392189)
chr8 (185-240)||(38939195-38939250)
chr8 (184-240)||(37294605-37294659)
chr8 (184-240)||(45405825-45405881)
chr8 (208-243)||(9314444-9314479)
chr8 (185-236)||(14233654-14233705)
chr8 (189-240)||(14710899-14710950)
chr8 (185-240)||(29107994-29108049)
chr8 (182-216)||(18549975-18550009)
chr8 (186-240)||(32777896-32777950)
chr8 (187-240)||(39211054-39211107)
chr8 (185-238)||(40413357-40413410)
chr8 (184-220)||(34578414-34578450)
chr8 (185-240)||(5740791-5740846)
chr8 (185-220)||(20996184-20996219)
chr8 (185-220)||(22203252-22203287)
chr8 (185-220)||(35701864-35701899)
chr8 (185-240)||(39884494-39884549)
chr8 (186-220)||(21649205-21649239)
chr8 (186-240)||(23265360-23265414)
chr8 (186-220)||(27300346-27300380)
chr8 (186-235)||(8787991-8788040)
chr8 (187-236)||(32020475-32020524)
chr8 (184-240)||(5502369-5502425)
chr8 (184-220)||(5742694-5742730)
chr8 (208-240)||(5924843-5924875)
chr8 (187-235)||(9630136-9630184)
chr8 (185-240)||(9963695-9963751)
chr8 (185-241)||(18538385-18538441)
chr8 (208-240)||(20995064-20995096)
chr8 (184-216)||(23708974-23709006)
chr8 (210-238)||(35701835-35701863)
chr8 (185-213)||(35792068-35792096)
chr8 (184-212)||(36064028-36064056)
chr8 (210-246)||(40380316-40380352)
chr8 (183-211)||(42443101-42443129)
chr8 (184-240)||(42569734-42569790)
chr8 (208-240)||(43186329-43186361)
chr8 (208-240)||(44001089-44001121)
chr8 (184-212)||(44068717-44068745)
[»] chr5 (34 HSPs)
chr5 (185-240)||(32732124-32732179)
chr5 (191-240)||(7080546-7080595)
chr5 (185-240)||(12203157-12203212)
chr5 (186-240)||(8442170-8442224)
chr5 (183-240)||(43153066-43153123)
chr5 (185-240)||(9957207-9957262)
chr5 (185-240)||(14206399-14206454)
chr5 (184-240)||(40201126-40201182)
chr5 (186-229)||(38387610-38387653)
chr5 (183-241)||(6865792-6865850)
chr5 (185-239)||(14923082-14923135)
chr5 (182-220)||(25585493-25585531)
chr5 (182-240)||(39458664-39458722)
chr5 (183-240)||(8725428-8725485)
chr5 (187-240)||(33910094-33910147)
chr5 (185-240)||(38919862-38919915)
chr5 (185-240)||(372726-372781)
chr5 (185-220)||(3031833-3031868)
chr5 (185-240)||(4434481-4434536)
chr5 (185-240)||(11878439-11878494)
chr5 (185-240)||(13734366-13734421)
chr5 (185-220)||(14523001-14523036)
chr5 (185-220)||(18729326-18729361)
chr5 (185-216)||(34693257-34693288)
chr5 (185-220)||(39032641-39032676)
chr5 (185-235)||(3849509-3849559)
chr5 (210-240)||(36899487-36899517)
chr5 (185-234)||(24486895-24486944)
chr5 (187-216)||(30103492-30103521)
chr5 (185-233)||(12878755-12878803)
chr5 (185-233)||(16972112-16972159)
chr5 (208-240)||(20985535-20985567)
chr5 (208-240)||(22653688-22653720)
chr5 (208-240)||(34693222-34693254)
[»] chr6 (25 HSPs)
chr6 (186-240)||(32135437-32135491)
chr6 (185-236)||(2165310-2165361)
chr6 (185-236)||(2176943-2176994)
chr6 (185-240)||(17442832-17442887)
chr6 (185-240)||(25561946-25562001)
chr6 (185-240)||(25567496-25567551)
chr6 (185-240)||(26101460-26101515)
chr6 (186-240)||(9395343-9395397)
chr6 (186-240)||(16121163-16121217)
chr6 (183-220)||(34792019-34792056)
chr6 (185-240)||(1196057-1196112)
chr6 (186-240)||(32644623-32644677)
chr6 (187-240)||(16865565-16865618)
chr6 (185-240)||(3180009-3180064)
chr6 (185-240)||(31517186-31517241)
chr6 (181-231)||(6110528-6110577)
chr6 (186-220)||(19712355-19712389)
chr6 (186-220)||(27790272-27790306)
chr6 (210-240)||(34792057-34792087)
chr6 (178-239)||(2241825-2241886)
chr6 (183-240)||(9200116-9200173)
chr6 (184-212)||(7636473-7636501)
chr6 (186-240)||(22422164-22422215)
chr6 (208-240)||(25995475-25995507)
chr6 (184-212)||(30714678-30714706)
[»] chr7 (43 HSPs)
chr7 (186-235)||(37848631-37848680)
chr7 (185-240)||(5905971-5906026)
chr7 (189-240)||(29923685-29923736)
chr7 (182-240)||(24380727-24380785)
chr7 (186-240)||(27866543-27866597)
chr7 (186-240)||(33465045-33465099)
chr7 (184-240)||(49142523-49142579)
chr7 (185-240)||(40108134-40108189)
chr7 (186-240)||(25272602-25272656)
chr7 (185-240)||(21589932-21589987)
chr7 (185-240)||(41985106-41985161)
chr7 (208-240)||(41538515-41538547)
chr7 (184-219)||(1709282-1709317)
chr7 (185-240)||(2323303-2323358)
chr7 (185-240)||(2469702-2469757)
chr7 (185-240)||(6822539-6822594)
chr7 (186-237)||(8459614-8459665)
chr7 (185-240)||(22330637-22330692)
chr7 (185-240)||(37351996-37352051)
chr7 (185-240)||(41989748-41989802)
chr7 (185-240)||(43942648-43942702)
chr7 (185-220)||(48522155-48522190)
chr7 (185-220)||(48639420-48639455)
chr7 (185-219)||(41538481-41538515)
chr7 (210-240)||(41910191-41910221)
chr7 (182-220)||(41910222-41910260)
chr7 (185-219)||(42552898-42552932)
chr7 (182-240)||(45420066-45420124)
chr7 (210-240)||(47945018-47945048)
chr7 (210-240)||(47950448-47950478)
chr7 (210-240)||(48639389-48639419)
chr7 (211-240)||(22331217-22331246)
chr7 (185-238)||(26749016-26749068)
chr7 (187-220)||(34349064-34349097)
chr7 (187-240)||(38547296-38547349)
chr7 (188-240)||(237026-237078)
chr7 (208-240)||(640425-640457)
chr7 (185-240)||(11352979-11353034)
chr7 (208-240)||(17039190-17039222)
chr7 (187-219)||(23034351-23034383)
chr7 (185-233)||(23848088-23848136)
chr7 (184-240)||(27570353-27570409)
chr7 (208-240)||(41458906-41458938)
[»] chr2 (60 HSPs)
chr2 (189-240)||(38598355-38598406)
chr2 (182-240)||(22296135-22296193)
chr2 (186-240)||(24727426-24727480)
chr2 (185-234)||(27329121-27329170)
chr2 (185-240)||(13881105-13881160)
chr2 (185-240)||(14021230-14021285)
chr2 (186-240)||(27538922-27538976)
chr2 (186-240)||(45202138-45202192)
chr2 (189-238)||(11828828-11828877)
chr2 (188-237)||(43076312-43076361)
chr2 (182-235)||(44058727-44058780)
chr2 (184-240)||(22353181-22353237)
chr2 (185-220)||(34141441-34141476)
chr2 (183-237)||(285478-285532)
chr2 (186-240)||(8757555-8757609)
chr2 (187-240)||(38777903-38777956)
chr2 (185-240)||(43205106-43205158)
chr2 (185-233)||(304996-305044)
chr2 (181-213)||(11152743-11152775)
chr2 (184-216)||(12256899-12256931)
chr2 (208-240)||(18749369-18749401)
chr2 (186-240)||(23141367-23141418)
chr2 (186-240)||(23553157-23553208)
chr2 (184-220)||(28679126-28679162)
chr2 (187-243)||(33583225-33583280)
chr2 (184-220)||(43820778-43820814)
chr2 (186-237)||(305978-306029)
chr2 (185-240)||(4263870-4263924)
chr2 (185-240)||(6215250-6215305)
chr2 (185-240)||(6885486-6885541)
chr2 (182-237)||(10550468-10550523)
chr2 (185-220)||(12208441-12208476)
chr2 (185-240)||(13453780-13453834)
chr2 (185-240)||(19695697-19695752)
chr2 (185-240)||(29795446-29795501)
chr2 (185-220)||(30339992-30340027)
chr2 (185-240)||(38724324-38724379)
chr2 (185-240)||(40115525-40115580)
chr2 (185-240)||(42081047-42081102)
chr2 (185-240)||(42607536-42607591)
chr2 (186-220)||(5852474-5852508)
chr2 (210-240)||(5852509-5852539)
chr2 (186-240)||(7121390-7121444)
chr2 (210-240)||(12256936-12256966)
chr2 (186-240)||(37737983-37738036)
chr2 (186-240)||(38600825-38600879)
chr2 (186-220)||(44897626-44897660)
chr2 (184-237)||(9647142-9647194)
chr2 (208-237)||(11152708-11152737)
chr2 (183-240)||(15141470-15141527)
chr2 (185-238)||(28013966-28014019)
chr2 (184-213)||(34913090-34913119)
chr2 (183-240)||(37966364-37966421)
chr2 (185-240)||(6049350-6049406)
chr2 (208-240)||(13850190-13850222)
chr2 (187-240)||(24491683-24491738)
chr2 (184-220)||(26387896-26387932)
chr2 (208-240)||(34144557-34144589)
chr2 (208-240)||(34373038-34373070)
chr2 (208-240)||(44484662-44484694)
[»] scaffold0286 (1 HSPs)
scaffold0286 (185-236)||(17048-17099)
[»] scaffold0054 (1 HSPs)
scaffold0054 (185-240)||(31606-31661)
[»] scaffold0024 (2 HSPs)
scaffold0024 (208-240)||(48687-48719)
scaffold0024 (189-219)||(48657-48687)
[»] scaffold0014 (1 HSPs)
scaffold0014 (184-220)||(145059-145095)
[»] scaffold0155 (1 HSPs)
scaffold0155 (185-240)||(3277-3332)
[»] scaffold0154 (1 HSPs)
scaffold0154 (183-213)||(9892-9922)
[»] scaffold0542 (1 HSPs)
scaffold0542 (182-235)||(2850-2903)
[»] scaffold0504 (1 HSPs)
scaffold0504 (187-240)||(11159-11212)
[»] scaffold0651 (1 HSPs)
scaffold0651 (208-240)||(4852-4884)
[»] scaffold0318 (1 HSPs)
scaffold0318 (185-240)||(18295-18351)


Alignment Details
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 45874457 - 45874287
Alignment:
Q  17 aatatgaacagtaacctgcctacccatatctttttcttgttactaagt--atttgtgactagtgggccaatcctcttattcaatccacgtacgtagaacg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45874457 aatatgaacagtaacctgcctacccatatctttttcttgttactatgtgtatttgtgactagtgggccaatcctcttattcaatccacgtacgtagaacg 45874358  T
Q  115 ttgggttaggtcgtttgtggtcacaatttcttcaccgcaagcaatcacccatactgatagcaattccatta 185  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45874357 ttaggttaggtcgtttgtggtcacaatttcttcaccgcaagcaatcacccatactgatagcaattccatta 45874287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 30414874 - 30414929
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30414874 agagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactcacat 30414929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 21446279 - 21446224
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  21446279 agagaaatgatatttatacaatcattttagtacaactttctctctcatactcacat 21446224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 16252819 - 16252765
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatactcacat 16252765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 50460771 - 50460718
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactcacat 50460718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 11121491 - 11121546
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||||||||||||    
T  11121491 agagaaatgatatttgtacaacaacttttgtacaactttctctctcatactcacat 11121546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 46903480 - 46903535
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||    
T  46903480 agagaaatgatatttgtacaaccattttgatacaactttctctctcatactcacat 46903535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 50797790 - 50797845
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaactttctctctcatactcacat 50797845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 33111963 - 33111917
Alignment:
Q  194 atatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||    
T  33111963 atatttgtacaaccgtttttgtacaaccttctctctcatactcacat 33111917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 35030822 - 35030768
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||    
T  35030822 gagaaatgttatttgtacaaccatttttgtacaactttctctctcatacttacat 35030768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 43757597 - 43757653
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| ||||||  |||||| |||||| ||||||||||||    
T  43757597 tagagaaatgatatttgtacaaccattttgatacaactttctctttcatactcacat 43757653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 4618658 - 4618709
Alignment:
Q  189 aaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||  |||||||||||||| | ||||||||||||||||    
T  4618658 aaatgatatttgtacaacaatttttgtacaaccctatctctcatactcacat 4618709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 19427520 - 19427575
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| ||||| |||||| ||||||| ||||||| |||||||||||    
T  19427520 agagaaatgatatttatacaaccattttggtacaactttctctcacatactcacat 19427575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 40596115 - 40596060
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||||||||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacat 40596060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 45272221 - 45272166
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || ||||  ||||| |||||||||||||||||||    
T  45272221 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcacat 45272166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 16836175 - 16836121
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||   ||||| || ||||||||||||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttttctctcatactcacat 16836121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 40139126 - 40139180
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| ||||||   ||||| |||||||||||||||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatactcacat 40139180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 41507254 - 41507200
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| ||||||   ||||| |||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacat 41507200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 1603002 - 1603059
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||| || ||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  1603002 ttagataagtgatatttgtacaattattttttaacaactttctctctcatactcacat 1603059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 5574329 - 5574296
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||||||||||||||||    
T  5574329 agaaatgatatttgtacaatcatttttgtacaac 5574296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 12972763 - 12972703
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacatattcttc 247  Q
    ||||||||||||||||||||||    |||| |||||| ||||||||||||||||||| ||||||    
T  12972763 tagagaaatgatatttgtacaac---ttttatacaacattctctctcatactcacattttcttc 12972703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 41564953 - 41564917
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41564953 tagagaaatgatatttgtacaaccatttttgtacaac 41564917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 48028536 - 48028584
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcata 233  Q
    ||||||||| |||||||||||||||||||||| ||| |||||| |||||    
T  48028536 agagaaatgttatttgtacaatcatttttgtataactttctctttcata 48028584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 14983783 - 14983838
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || ||||  ||||| |||||||||||| ||||||    
T  14983783 agagaaatgatatttgtacaaccactttttaacaactttctctctcatattcacat 14983838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 27687580 - 27687525
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||   ||||| || ||||||||||||||||    
T  27687580 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactcacat 27687525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 30196724 - 30196779
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgt-acaaccttctctctcatactcacat 240  Q
    |||||||||||||| |||||||| |||| | ||||| |||||||||||||||||||    
T  30196724 gagaaatgatatttctacaatcaattttttgacaactttctctctcatactcacat 30196779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 36954670 - 36954723
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||    
T  36954670 agagaaatgatatttgtacaa-catttttg-acaactttctttctcatactcacat 36954723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 37742013 - 37741958
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||| ||||||||||||||||||||||  |||||| |||||| ||||||| ||||    
T  37742013 agagagatgatatttgtacaatcattttgatacaactttctctttcatacttacat 37741958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 48256920 - 48256972
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| ||  |||||||||| |||||||||||| ||||||    
T  48256920 gagaaatgatatttgtacaacca--tttgtacaactttctctctcatattcacat 48256972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 49453490 - 49453545
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || |||   ||||| |||||||||||||||||||    
T  49453490 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacat 49453545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 51718687 - 51718632
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgt-acaaccttctctctcatactcacat 240  Q
    ||||||||||||||| |||| ||||||| | ||||| |||||||||||||||||||    
T  51718687 gagaaatgatatttgaacaaccatttttttcacaactttctctctcatactcacat 51718632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 1100216 - 1100250
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaa 219  Q
    ||||||||||||||||||||| |||||||||||||    
T  1100216 agagaaatgatatttgtacaaccatttttgtacaa 1100250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 5574295 - 5574265
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  5574295 ttttgtacaaccttctctctcatactcacat 5574265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 12990540 - 12990506
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  12990540 gagaaatgatatttgtacaaccatttttgtacaac 12990506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 18336158 - 18336212
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| ||| |||||||   ||||| |||||||||||||||||||    
T  18336158 gagaaatgatatttgaacattcattttgtgacaactttctctctcatactcacat 18336212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 27954243 - 27954277
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||| ||||||||||||||||||||    
T  27954243 gagaaatgatatttatacaatcatttttgtacaac 27954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 28457418 - 28457384
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||||||||| |||||||    
T  28457418 gagaaatgatatttgtacaatcattttggtacaac 28457384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 37690429 - 37690483
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||| |||   ||||  |||||||||||||||||||    
T  37690429 gagaaatgatatttgtacaatcactttatgacaattttctctctcatactcacat 37690483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 216
Target Start/End: Complemental strand, 40118786 - 40118756
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgta 216  Q
    |||||||||||||||||||||||||||||||    
T  40118786 gagaaatgatatttgtacaatcatttttgta 40118756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 47398511 - 47398457
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| ||| ||||||||  ||||  |||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcattttttgacaattttctctctcatactcacat 47398457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 48872088 - 48872034
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||  ||||| |||||||||| || |||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttctctctcacacccacat 48872034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 48962021 - 48962051
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  48962021 ttttgtacaaccttctctctcatactcacat 48962051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 51728036 - 51728006
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  51728036 ttttgtacaaccttctctctcatactcacat 51728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 4857919 - 4857968
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcat 232  Q
    |||||||||||||||||| ||||||| ||||  ||||| |||||||||||    
T  4857919 ttagagaaatgatatttgaacaatcactttttgacaactttctctctcat 4857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 5975545 - 5975602
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| ||||||  || ||||  ||||| |||||||||||||||||||    
T  5975545 ttagagaaatgatatatgtacatccactttttgacaactttctctctcatactcacat 5975602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 8577576 - 8577543
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgta 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  8577576 ttagagaaatgatatttgtacaaccatttttgta 8577543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 240
Target Start/End: Original strand, 29638751 - 29638780
Alignment:
Q  211 tttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||||    
T  29638751 tttgtacaaccttctctctcatactcacat 29638780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 31244804 - 31244771
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaa 219  Q
    ||||||||||||||||| ||||||||||||||||    
T  31244804 gagaaatgatatttgtataatcatttttgtacaa 31244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 43612141 - 43612092
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatac 234  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||||||    
T  43612141 agagaaatgatatttgtacaaccattttatgacaactttctctctcatac 43612092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 51571416 - 51571469
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| || ||||  ||||| |||||||||||| ||||||    
T  51571416 agaaatgatatttgtacaaccactttttgacaactttctctctcatattcacat 51571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 2827748 - 2827716
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  2827748 atttttgtacaactttctctctcatactcacat 2827716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 22674745 - 22674777
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  22674745 atttttgtacaactttctctctcatactcacat 22674777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 27563482 - 27563510
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttt 212  Q
    |||||||||||||||||||||||||||||    
T  27563482 tagagaaatgatatttgtacaatcatttt 27563510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 29094803 - 29094752
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||    ||| |||||| ||||||||||||||||||||    
T  29094803 gagaaatgatatttgtacaac---tttcgtacaatcttctctctcatactcacat 29094752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 30535990 - 30536018
Alignment:
Q  185 agagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||    
T  30535990 agagaaatgatatttgtacaatcattttt 30536018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 44672102 - 44672074
Alignment:
Q  185 agagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||    
T  44672102 agagaaatgatatttgtacaatcattttt 44672074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 49615315 - 49615283
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||| |||||||||    
T  49615315 atttttgtacaaccttctctctcttactcacat 49615283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 21766557 - 21766612
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21766557 agagaaatgatatttgtataatcatttttgtacaaccttctctctcatactcacat 21766612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 24310581 - 24310520
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacatattcttc 247  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  24310581 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcacattttcttc 24310520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 37731926 - 37731980
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactcacat 37731980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 54848150 - 54848203
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  54848150 agaaatgatatttgtacaaccatttttgtacaaccttctctctcatattcacat 54848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 50980600 - 50980656
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  50980600 tagagaaatgatatttgtacaatcattttctaacaaccttctctctcatactcacat 50980656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 1868954 - 1868899
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  1868954 agagaaatgatatttgtacaaccatttttgtacaactttctatctcatactcacat 1868899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 28899275 - 28899221
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  28899275 gagaaatgatatttgtacaatcattttggtacaactttctctctcatattcacat 28899221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 9828045 - 9827989
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||    
T  9828045 tagagaaatgatatttgtacaaccattttagtacaactttctctctcacactcacat 9827989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31413847 - 31413792
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||    
T  31413847 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactgacat 31413792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 46686244 - 46686298
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  46686244 agagaaatgatatttgtacaaccatttt-gtacaactttctctctcatactcacat 46686298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 7795025 - 7795079
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||    
T  7795025 gagaaatgatatttgtacaaccatttttgtacaactttctttctcatacttacat 7795079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 46799779 - 46799821
Alignment:
Q  198 ttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  46799779 ttgtacaaccatttttgtacaaccttctctctcatactcacat 46799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 9095949 - 9096002
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  9095949 agaaatgttatttgtacaattatttttgtacaattttctctctcatactcacat 9096002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 22007831 - 22007885
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||    
T  22007831 tagagaaatgatatttgtacaattatttttggacaac--tctctctcatactcacat 22007885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 41347529 - 41347473
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  41347529 ttagagaaattatatttgtacaatcatttttg-acaactttctctctcatgctcacat 41347473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 8614190 - 8614241
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  8614190 gagaaatgatatttgtacaac---ttttgtacaaccttctctctcatactcacat 8614241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 37022271 - 37022326
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||  |||||| || ||||||||||||||||    
T  37022271 agagaaatgatatttgtacaaccattttgatacaactttatctctcatactcacat 37022326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 42490919 - 42490974
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || ||||  ||||| |||||||||||||||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcacat 42490974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 45678273 - 45678328
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||| |||||||||||||||||||||||||  || |||||||||| |||||    
T  45678273 agagaaatgttatttgtacaatcatttttgtacaattttatctctcatacccacat 45678328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 50291281 - 50291316
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||||||||||||||||||    
T  50291281 agagaaatgatatttgtacaatcatttttgtacaac 50291316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 22893868 - 22893902
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaa 219  Q
    |||||||||||||||||||||||||||||||||||    
T  22893868 agagaaatgatatttgtacaatcatttttgtacaa 22893902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 22945536 - 22945570
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaa 219  Q
    |||||||||||||||||||||||||||||||||||    
T  22945536 agagaaatgatatttgtacaatcatttttgtacaa 22945570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 32294819 - 32294766
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| ||    |||||||||||||||||||||||||||||||    
T  32294819 tagagaaatgatatttgtataac---ttttgtacaaccttctctctcatactcacat 32294766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 5386385 - 5386438
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||| |||| |||||||  ||||| |||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcacat 5386438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 7161587 - 7161531
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||| |||||||||||||||||| |||||| |||||| |||||||||||| ||||||    
T  7161587 ttagaaaaatgatatttgtacaat-atttttttacaactttctctctcatattcacat 7161531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 51107515 - 51107482
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgta 216  Q
    ||||||||||||||||||||||||||||||||||    
T  51107515 ttagagaaatgatatttgtacaatcatttttgta 51107482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 2109441 - 2109497
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| ||| |||  ||||| |||||| ||||||||||||    
T  2109441 tagagaaatgatatttgtacaaccatcttttgacaactttctctttcatactcacat 2109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 19815515 - 19815463
Alignment:
Q  189 aaatgatatttgtacaatcattttt-gtacaaccttctctctcatactcacat 240  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||    
T  19815515 aaatgatatttttacaatcattttttgtataaccttctctctcatacttacat 19815463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 27384186 - 27384234
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcata 233  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcata 27384234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 39605977 - 39606032
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||| || |||| |||||||| ||||| |||||||||||||||||||    
T  39605977 tagagaaatgatatatgaacaaccatttttg-acaactttctctctcatactcacat 39606032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 41010231 - 41010175
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| |||||||||||||||||||   | ||||| ||||||||||    
T  41010231 tagagaaatgatatttatacaatcatttttgtacaattctttctcttatactcacat 41010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 1728148 - 1728093
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| |||||| |  ||||||||||||||||| ||||||| ||||    
T  1728148 agagaaatgatatttttacaattaaatttgtacaaccttctctttcatacttacat 1728093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 4511824 - 4511879
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||| || ||||||   ||||| |||||||||||||||||||    
T  4511824 agagaaatgatatttgtataaccattttatgacaactttctctctcatactcacat 4511879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 22072263 - 22072314
Alignment:
Q  189 aaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||| |||||||||||  |||||| || ||||||||||||||||    
T  22072263 aaatgatatttgaacaatcattttgttacaactttttctctcatactcacat 22072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 31657653 - 31657712
Alignment:
Q  181 cattagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||  ||||||   ||||| |||||||||||||||||||    
T  31657653 cattagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacat 31657712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 33776907 - 33776961
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| ||||||||||||| || ||| ||||| ||||||    
T  33776907 agagaaatgatatttgtacaat-atttttgtacaactttatctttcatattcacat 33776961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 36871228 - 36871185
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctct 229  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||    
T  36871228 gagaaatgatatttgtacaactatttttgtacaactttctctct 36871185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 1015160 - 1015122
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaacctt 223  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  1015160 agagaaatgatatttgtacaaccaattttgtacaacctt 1015122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 1627610 - 1627568
Alignment:
Q  194 atatttgtacaatcatttttgtacaaccttctctctcatactc 236  Q
    ||||||||||||||||||||  ||||| |||||||||||||||    
T  1627610 atatttgtacaatcattttttgacaactttctctctcatactc 1627568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 4106053 - 4106106
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcaca 239  Q
    ||||||||||||||||||||||  ||||| |||||  ||||||||||||||||||    
T  4106053 agagaaatgatatttgtacaat-ttttttttacaattttctctctcatactcaca 4106106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 4974111 - 4974165
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||  ||||||  ||||| ||||||||||||| |||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatacccacat 4974165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 6256520 - 6256486
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||| |||||||||||||||||||||||||||    
T  6256520 gagaaataatatttgtacaatcatttttgtacaac 6256486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 12387725 - 12387671
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||  ||||| |||||  ||||| ||||||    
T  12387725 gagaaatgatatttgtacaatcattttttgacaactttctccttcataatcacat 12387671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 18944314 - 18944344
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  18944314 ttttgtacaaccttctctctcatactcacat 18944344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 19232185 - 19232139
Alignment:
Q  194 atatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||| || ||||  |||||||||||||||||||||||||    
T  19232185 atatttgtacaaccaatttttgacaaccttctctctcatactcacat 19232139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 32365727 - 32365673
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| ||||||   ||||| |||||||||||| ||||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatattcacat 32365673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 36364821 - 36364791
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  36364821 ttttgtacaaccttctctctcatactcacat 36364791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 39241361 - 39241307
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| || |||   ||||| |||||||||||||||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactttctctctcatactcacat 39241307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 15638159 - 15638188
Alignment:
Q  184 tagagaaatgatatttgtacaatcattttt 213  Q
    ||||||||||||||||||||||||||||||    
T  15638159 tagagaaatgatatttgtacaatcattttt 15638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 241
Target Start/End: Original strand, 24235353 - 24235386
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacata 241  Q
    ||||||||||||| ||||||||||||||||||||    
T  24235353 atttttgtacaactttctctctcatactcacata 24235386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 28676211 - 28676158
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| ||||||   ||||| |||||| ||||||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaactttctctttcatactcacat 28676158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 31559536 - 31559565
Alignment:
Q  184 tagagaaatgatatttgtacaatcattttt 213  Q
    ||||||||||||||||||||||||||||||    
T  31559536 tagagaaatgatatttgtacaatcattttt 31559565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 46792050 - 46791997
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| |||  ||||||||||||  |||| ||||||||||||||    
T  46792050 agaaatgatatttgtgcaacaatttttgtacaattttctttctcatactcacat 46791997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 54801561 - 54801532
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttt 212  Q
    ||||||||||||||||||||||||||||||    
T  54801561 ttagagaaatgatatttgtacaatcatttt 54801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 4577590 - 4577622
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  4577590 atttttgtacaactttctctctcatactcacat 4577622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 5234532 - 5234480
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    |||||||||||||||||||||||| |||   | ||| ||||||||||||||||    
T  5234532 agagaaatgatatttgtacaatcactttgtgataactttctctctcatactca 5234480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 6126886 - 6126918
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  6126886 atttttgtacaacattctctctcatactcacat 6126918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 31318786 - 31318818
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  31318786 atttttgtacaactttctctctcatactcacat 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 32621636 - 32621692
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||| |||| ||||||   ||||| |||||||| ||||||||||    
T  32621636 tagagaaatgatatttgcacaaccattttgtgacaactttctctctaatactcacat 32621692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 36110167 - 36110199
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||| ||||||    
T  36110167 atttttgtacaaccttctctctcatattcacat 36110199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 38960730 - 38960698
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaa 219  Q
    ||||||||||||||||||| |||||||||||||    
T  38960730 agaaatgatatttgtacaaccatttttgtacaa 38960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 43307438 - 43307406
Alignment:
Q  188 gaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||| ||||||||||||||    
T  43307438 gaaatgatatttgtacaaccatttttgtacaac 43307406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 46355366 - 46355330
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| || |||||||||||    
T  46355366 tagagaaatgatatttgtacaaccacttttgtacaac 46355330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 54036590 - 54036538
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    ||||||||||||||||||||| ||||||   ||||| || |||||||||||||    
T  54036590 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactca 54036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 54803366 - 54803334
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  54803366 atttttgtacaactttctctctcatactcacat 54803334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 50745559 - 50745614
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50745559 agagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcacat 50745614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 29846952 - 29846897
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  29846952 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcacat 29846897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 49361896 - 49361841
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  49361896 agagaaatgatatttgtacaatcatttttgtacaactttttctctcatactcacat 49361841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29057659 - 29057713
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcacat 29057713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 48490576 - 48490519
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  48490576 ttagagaaatgatatttgtacaaccacttttgtacaactttctctctcatactcacat 48490519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 35368621 - 35368676
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactcacat 35368676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 48117346 - 48117401
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||    
T  48117346 agagaaatgatatttatacaaccatttttgtacaactttctctttcatactcacat 48117401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 47683798 - 47683855
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||| ||||||   ||||| |||||||||||||||||||    
T  47683798 ttagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacat 47683855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 19149001 - 19149055
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| |||||||||||| || ||| |||||||||||||||||||    
T  19149001 agagaaatgatatttgaacaatcattttt-tataactttctctctcatactcacat 19149055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 23907048 - 23906993
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||| |  |||||| |||||||||||||||||||    
T  23907048 agagaaatgatatttgtacaaccattatgttacaactttctctctcatactcacat 23906993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 43220202 - 43220147
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||| |||||||| ||||| |||||||||| ||| |||||||||||||||||||    
T  43220202 agagaattgatatttttacaaccatttttgtaaaactttctctctcatactcacat 43220147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 46952948 - 46953003
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||  | ||| |||||||||||||||||||    
T  46952948 agagaaatgatatttgtacaaccattttttgataactttctctctcatactcacat 46953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 3484770 - 3484824
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| ||| ||||||  |||||| |||||||||||||||||||    
T  3484770 gagaaatgatatttgtccaaccattttattacaactttctctctcatactcacat 3484824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 30664503 - 30664537
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||||||||||||||||    
T  30664503 gagaaatgatatttgtacaatcatttttgtacaac 30664537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 43149403 - 43149349
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||| |||||||||||  ||||||||||||| |||| ||||||||||||||    
T  43149403 gagaaatgttatttgtacaactatttttgtacaactttctttctcatactcacat 43149349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 35554174 - 35554121
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| ||||| ||||  ||||| |||||||||||||||||||    
T  35554174 agaaatgatatttgtataatcactttttgacaactttctctctcatactcacat 35554121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 38957574 - 38957518
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||  ||||||| ||||| || ||||||||||||||||    
T  38957574 ttagagaaatgatatttgtacaactatttttg-acaactttttctctcatactcacat 38957518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 1765403 - 1765458
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||   ||||| ||||||||||||| |||||    
T  1765403 agagaaatgatatttgtacattcattttgtgacaactttctctctcatacgcacat 1765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 28700471 - 28700526
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| |||| |||||||  ||||| || ||||||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttttgacaactttatctctcatactcacat 28700526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 43169814 - 43169759
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||   ||||| || ||||||||||||||||    
T  43169814 agagaaatgatatttgtacaaccattttgtgacaactttttctctcatactcacat 43169759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 47484290 - 47484345
Alignment:
Q  186 gagaaatgatatttgtacaatca-tttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| || |||||||||||  || ||||||||||||||||    
T  47484290 gagaaatgatatttgtacaaccattttttgtacaattttttctctcatactcacat 47484345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 55361294 - 55361239
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||| ||||||||||    
T  55361294 agagaaatgatatttgtacaaccatttcttgacaactttctctcttatactcacat 55361239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 1402685 - 1402715
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  1402685 ttttgtacaaccttctctctcatactcacat 1402715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 9159108 - 9159074
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaa 219  Q
    ||||||||||||||||||||| |||||||||||||    
T  9159108 agagaaatgatatttgtacaaccatttttgtacaa 9159074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 14839116 - 14839082
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  14839116 gagaaatgatatttgtacaaccatttttgtacaac 14839082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 19150393 - 19150363
Alignment:
Q  183 ttagagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||||    
T  19150393 ttagagaaatgatatttgtacaatcattttt 19150363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 26548834 - 26548780
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||| ||||||| ||||  ||||| ||||||| |||||||||||||||||||    
T  26548834 gagaaataatatttggacaactattttggtacaactttctctctcatactcacat 26548780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 29555874 - 29555844
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  29555874 ttttgtacaaccttctctctcatactcacat 29555844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 216
Target Start/End: Original strand, 48205045 - 48205075
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgta 216  Q
    |||||||||||||||||||||||||||||||    
T  48205045 gagaaatgatatttgtacaatcatttttgta 48205075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 50876425 - 50876371
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    |||||||||||||||||||||||  ||||||  ||||| |||||| |||||||||    
T  50876425 ttagagaaatgatatttgtacaacaattttttgacaactttctctatcatactca 50876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 11056985 - 11056928
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||  ||||||  ||||| |||||| ||||| ||||||    
T  11056985 ttagagaaatgatatttgtacaacaattttttgacaactttctctttcatattcacat 11056928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 21481777 - 21481829
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||    ||||||||||| || ||||||||||||||||    
T  21481777 agagaaatgatatttgtacaac---ttttgtacaactttttctctcatactcacat 21481829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 27646495 - 27646524
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttt 212  Q
    ||||||||||||||||||||||||||||||    
T  27646495 ttagagaaatgatatttgtacaatcatttt 27646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 44689793 - 44689826
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||| ||||||||||||||    
T  44689793 agaaatgatatttgtacaaccatttttgtacaac 44689826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 2280175 - 2280211
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| |||||| |||||||    
T  2280175 tagagaaatgatatttgtacaaccattttagtacaac 2280211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 7351711 - 7351679
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgta 216  Q
    |||||||||||||||||||||| ||||||||||    
T  7351711 tagagaaatgatatttgtacaaccatttttgta 7351679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 9557960 - 9557928
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  9557960 atttttgtacaactttctctctcatactcacat 9557928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 11405022 - 11404966
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| |  || | |||||||||||| |||||||||||||| ||||    
T  11405022 tagagaaatgatatttcttgaaccgtttttgtacaactttctctctcatacttacat 11404966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 27198232 - 27198204
Alignment:
Q  185 agagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||    
T  27198232 agagaaatgatatttgtacaatcattttt 27198204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 38359378 - 38359350
Alignment:
Q  185 agagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||    
T  38359378 agagaaatgatatttgtacaatcattttt 38359350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 39901590 - 39901618
Alignment:
Q  185 agagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||    
T  39901590 agagaaatgatatttgtacaatcattttt 39901618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 41112144 - 41112109
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41112144 tagagaaatgatatttgtacaa-catttttgtacaac 41112109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 42718126 - 42718186
Alignment:
Q  181 cattagagaaatgatatttgtacaatcatttt-tgtacaaccttctctctcatactcacat 240  Q
    ||||| ||||||||||||||||||| |||||| |  ||||| |||||||||||| ||||||    
T  42718126 cattaaagaaatgatatttgtacaaccattttattaacaactttctctctcatattcacat 42718186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 42888845 - 42888809
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||  ||||||||||||||    
T  42888845 tagagaaatgatatttgtacagccatttttgtacaac 42888809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 50146486 - 50146542
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| |||||||||   ||||  |||||||||||||| ||||    
T  50146486 tagagaaatgatatttgtataatcattttgtgacaattttctctctcatacttacat 50146542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 6243045 - 6243099
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcacat 6243099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 25430656 - 25430711
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  25430656 agagaaatgatatttgtacaaccatttttgtacaaccttctatctcatactcacat 25430711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 37471654 - 37471708
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctcgtactcacat 37471708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 13924021 - 13924076
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  13924021 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacat 13924076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 43590704 - 43590759
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  43590704 agagaaatgatatttgtataatcatttttgtataactttctctctcatactcacat 43590759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 41776186 - 41776240
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactcacat 41776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 7010683 - 7010739
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||||  ||||  |||||||||||||||||||    
T  7010683 tagagaaatgatatttgtacaatcattttttgacaattttctctctcatactcacat 7010739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 8233554 - 8233506
Alignment:
Q  188 gaaatgatatttgtacaatcatttttgtacaaccttctctctcatactc 236  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  8233554 gaaatgatatttgtacaatcatttttgtacatctttctctctcatactc 8233506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 36675336 - 36675387
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    |||||||||||||||||||| |||||||||||||| || |||||||||||||    
T  36675336 gagaaatgatatttgtacaaccatttttgtacaactttttctctcatactca 36675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 37392189 - 37392134
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||    
T  37392189 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcacat 37392134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 38939250 - 38939195
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| |||||  ||||||||||||| |||||||||||||||||||    
T  38939250 agagaaatgatatttctacaactatttttgtacaactttctctctcatactcacat 38939195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 37294605 - 37294659
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| || |  |||||||||||||||||||||||||||||||    
T  37294605 tagagaaatgatatttgtaaaaac--ttttgtacaaccttctctctcatactcacat 37294659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 45405881 - 45405825
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| ||||||  |||||| || ||||||||||||||||    
T  45405881 tagagaaatgatatttgtacaaccattttgatacaactttttctctcatactcacat 45405825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 9314444 - 9314479
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacatatt 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  9314444 atttttgtacaaccttctctctcatactcacatatt 9314479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 14233705 - 14233654
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactc 236  Q
    |||||||||||||||||||||  |||||| |||||| |||||||||||||||    
T  14233705 agagaaatgatatttgtacaactatttttttacaactttctctctcatactc 14233654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 14710950 - 14710899
Alignment:
Q  189 aaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||   ||||| |||||||||||||||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaactttctctctcatactcacat 14710899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 29107994 - 29108049
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||  ||||| |||||| | ||||||||||    
T  29107994 agagaaatgatatttgtacaatcattttttaacaactttctcttttatactcacat 29108049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 18549975 - 18550009
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgta 216  Q
    |||||||||||||||||||||||||||||||||||    
T  18549975 attagagaaatgatatttgtacaatcatttttgta 18550009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 32777896 - 32777950
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||| ||||||| ||||||| |||||| |||||||| ||||||||||    
T  32777896 gagaaatgatatctgtacaaccatttttatacaactttctctcttatactcacat 32777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 39211054 - 39211107
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||| |||| |||||||  ||||| |||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcacat 39211107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 40413410 - 40413357
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcac 238  Q
    |||||||||||||||||||||| |||||   ||||| |||||||||||||||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaactttctctctcatactcac 40413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 34578450 - 34578414
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| ||||||||||||||    
T  34578450 tagagaaatgatatttgtacaaccatttttgtacaac 34578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 5740846 - 5740791
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || ||||  ||||| || ||||||||||||||||    
T  5740846 agagaaatgatatttgtacaaccactttttgacaactttttctctcatactcacat 5740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 20996219 - 20996184
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||||||||||| |||||    
T  20996219 agagaaatgatatttgtacaatcatttttgaacaac 20996184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 22203287 - 22203252
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  22203287 agagaaatgatatttgtacaaccatttttgtacaac 22203252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 35701899 - 35701864
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35701899 agagaaatgatatttgtacaaccatttttgtacaac 35701864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 39884549 - 39884494
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| |||||  |||||  || ||||||||||||||||    
T  39884549 agagaaatgatatttgtacaattattttattacaatattatctctcatactcacat 39884494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 21649239 - 21649205
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  21649239 gagaaatgatatttgtacaaccatttttgtacaac 21649205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 23265414 - 23265360
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||| ||  |||||| |||||| || ||||||||||||||||    
T  23265414 gagaaatgatatttgtataactatttttatacaactttttctctcatactcacat 23265360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 27300346 - 27300380
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  27300346 gagaaatgatatttgtacaaccatttttgtacaac 27300380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 8788040 - 8787991
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatact 235  Q
    ||||||||||| |||||| ||||||||   ||||||||||||||||||||    
T  8788040 gagaaatgatagttgtacgatcattttgtgacaaccttctctctcatact 8787991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 32020524 - 32020475
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactc 236  Q
    ||||||||||||||||||| |||||||  | ||| |||||||||||||||    
T  32020524 agaaatgatatttgtacaaccattttttgataactttctctctcatactc 32020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 5502369 - 5502425
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| || |||   ||||| |||||||||||| ||||||    
T  5502369 tagagaaatgatatttgtacaaccactttgtgacaactttctctctcatattcacat 5502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 5742730 - 5742694
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| |||||| |||||||    
T  5742730 tagagaaatgatatttgtacaaccattttggtacaac 5742694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 5924843 - 5924875
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  5924843 atttttgtacaactttctctctcatactcacat 5924875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 9630136 - 9630184
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatact 235  Q
    |||||||||||||| ||||||||||||  ||||| |||||| |||||||    
T  9630136 agaaatgatatttgaacaatcattttttaacaactttctctttcatact 9630184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 9963695 - 9963751
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctc-tcatactcacat 240  Q
    |||||||||||||||||||||| ||||||  ||||  ||||||| ||||||||||||    
T  9963695 agagaaatgatatttgtacaataattttttgacaattttctctcatcatactcacat 9963751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 18538385 - 18538441
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacata 241  Q
    |||||||||||| |||||||| || ||||  ||||| || |||||||||||||||||    
T  18538385 agagaaatgatacttgtacaaccactttttgacaactttatctctcatactcacata 18538441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 20995096 - 20995064
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||| ||||    
T  20995096 atttttgtacaaccttctctctcatacttacat 20995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 23708974 - 23709006
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgta 216  Q
    |||||||||||||||||||||| ||||||||||    
T  23708974 tagagaaatgatatttgtacaaccatttttgta 23709006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 35701863 - 35701835
Alignment:
Q  210 ttttgtacaaccttctctctcatactcac 238  Q
    |||||||||||||||||||||||||||||    
T  35701863 ttttgtacaaccttctctctcatactcac 35701835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 35792068 - 35792096
Alignment:
Q  185 agagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||    
T  35792068 agagaaatgatatttgtacaatcattttt 35792096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 36064028 - 36064056
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttt 212  Q
    |||||||||||||||||||||||||||||    
T  36064028 tagagaaatgatatttgtacaatcatttt 36064056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 40380316 - 40380352
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacatattctt 246  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  40380316 ttttgtacaactttctctctcatactcacatgttctt 40380352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 42443101 - 42443129
Alignment:
Q  183 ttagagaaatgatatttgtacaatcattt 211  Q
    |||||||||||||||||||||||||||||    
T  42443101 ttagagaaatgatatttgtacaatcattt 42443129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 42569790 - 42569734
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||| ||| |||||||   ||||| |||||||||||| ||||||    
T  42569790 tagagaaatgatatttgaacattcattttatgacaactttctctctcatattcacat 42569734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 43186329 - 43186361
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  43186329 atttttgtacaactttctctctcatactcacat 43186361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 44001089 - 44001121
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  44001089 atttttgtacaactttctctctcatactcacat 44001121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 44068717 - 44068745
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttt 212  Q
    |||||||||||||||||||||||||||||    
T  44068717 tagagaaatgatatttgtacaatcatttt 44068745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 32732179 - 32732124
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  32732179 agagaaattatatttgtacaatcatttttgtacaactttctctctcatactcacat 32732124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 7080546 - 7080595
Alignment:
Q  191 atgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7080546 atgatatttgtacaatcatttttgtacaactttctctctcatactcacat 7080595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 12203157 - 12203212
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  12203157 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacat 12203212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 8442170 - 8442224
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  8442170 gagaaatgatatttgtacaattatttttgtacaactttctctctcatattcacat 8442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 43153123 - 43153066
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  43153123 ttagagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcacat 43153066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 9957262 - 9957207
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| ||||||||| ||| |||| ||||||||||||||    
T  9957262 agagaaatgatatttgtacaattatttttgtagaactttctttctcatactcacat 9957207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 14206399 - 14206454
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||    
T  14206399 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcacat 14206454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 40201182 - 40201126
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| ||||| |||||||||||||  |||||||||||| ||||||    
T  40201182 tagagaaatgatatttatacaaccatttttgtacaatattctctctcatagtcacat 40201126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 38387610 - 38387653
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctct 229  Q
    |||||||||||||||||||| |||||||||||||| ||||||||    
T  38387610 gagaaatgatatttgtacaaccatttttgtacaactttctctct 38387653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 6865850 - 6865792
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacata 241  Q
    ||||||||||||||||||||||| || |||   ||||| ||||||||||||||||||||    
T  6865850 ttagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacata 6865792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 14923082 - 14923135
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcaca 239  Q
    |||||||||||||||| |||| ||||||| |||||| ||||||||||||||||||    
T  14923082 agagaaatgatatttgaacaaccattttt-tacaactttctctctcatactcaca 14923135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 25585531 - 25585493
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  25585531 attagagaaatgatatttgtacaaccatttttgtacaac 25585493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 39458664 - 39458722
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| ||||||| || ||||  ||||| |||||||||||||||||||    
T  39458664 attagagaaatgatatctgtacaaccagtttttgacaactttctctctcatactcacat 39458722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 8725485 - 8725428
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||| |||||||||||| || |||  |||||| |||||||||||||||||||    
T  8725485 ttagagaaattatatttgtacaaccactttattacaactttctctctcatactcacat 8725428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 33910147 - 33910094
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| ||| |||||||  ||||| |||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactcacat 33910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 38919862 - 38919915
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||  |||||||||||||  | ||||||||||||||||    
T  38919862 agagaaatgatatttgtacaactatttttgtacaac--tttctctcatactcacat 38919915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 372781 - 372726
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||| ||||||||| ||||||   ||||| |||||||||||||||||||    
T  372781 agagaaatgatttttgtacaaccattttgtgacaactttctctctcatactcacat 372726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 3031833 - 3031868
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3031833 agagaaatgatatttgtacaaccatttttgtacaac 3031868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 4434481 - 4434536
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||  ||||  || ||||||||||||||||    
T  4434481 agagaaatgatatttgtacaaccattttttgacaattttttctctcatactcacat 4434536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 11878439 - 11878494
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| |||||| || ||  |||| ||||||||||||||    
T  11878439 agagaaatgatatttgtacaattatttttatataattttctatctcatactcacat 11878494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 13734421 - 13734366
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || |||   ||||| |||||||||||||||||||    
T  13734421 agagaaatgatatttgtacaaccactttatgacaactttctctctcatactcacat 13734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 14523036 - 14523001
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  14523036 agagaaatgatatttgtacaaccatttttgtacaac 14523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 18729361 - 18729326
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  18729361 agagaaatgatatttgtacaaccatttttgtacaac 18729326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 34693288 - 34693257
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgta 216  Q
    ||||||||||||||||||||||||||||||||    
T  34693288 agagaaatgatatttgtacaatcatttttgta 34693257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 39032676 - 39032641
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39032676 agagaaatgatatttgtacaaccatttttgtacaac 39032641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 3849509 - 3849559
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatact 235  Q
    ||||||||||||||||| |||| |||||||||||| ||| ||| |||||||    
T  3849509 agagaaatgatatttgttcaattatttttgtacaatcttttctttcatact 3849559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 36899517 - 36899487
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  36899517 ttttgtacaaccttctctctcatactcacat 36899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 24486895 - 24486944
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatac 234  Q
    |||||||||||||||| ||||| ||||||||||||  |||| ||||||||    
T  24486895 agagaaatgatatttgaacaataatttttgtacaattttctttctcatac 24486944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 30103521 - 30103492
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgta 216  Q
    ||||||||||||||||||||||||||||||    
T  30103521 agaaatgatatttgtacaatcatttttgta 30103492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 12878755 - 12878803
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcata 233  Q
    ||||||||||||||||||||| ||||||  || ||| ||||||||||||    
T  12878755 agagaaatgatatttgtacaaccattttattataactttctctctcata 12878803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 16972159 - 16972112
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcata 233  Q
    |||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  16972159 agagaaatgatattttaacaaccattttt-tacaaccttctctctcata 16972112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 20985567 - 20985535
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  20985567 atttttgtacaactttctctctcatactcacat 20985535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 22653688 - 22653720
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  22653688 atttttgtacaactttctctctcatactcacat 22653720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 34693254 - 34693222
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||| ||||||||||||||||||||    
T  34693254 atttttgtacaatcttctctctcatactcacat 34693222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 32135491 - 32135437
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttgtacaactttctctatcatactcacat 32135437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 2165361 - 2165310
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactc 236  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  2165361 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2165310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 2176994 - 2176943
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactc 236  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  2176994 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 17442832 - 17442887
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||    
T  17442832 agagaaataatatttgtacaaccatttttgtacaactttctctcttatactcacat 17442887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 25562001 - 25561946
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  25562001 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcacat 25561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 25567551 - 25567496
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||| |||||| |||||||||||||| || ||||||||||||||||    
T  25567551 agagaaatgatattcgtacaaccatttttgtacaactttatctctcatactcacat 25567496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 26101515 - 26101460
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  26101515 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcacat 26101460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 9395397 - 9395343
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||    
T  9395397 gagaaatgatatttgtacaactatttttgtacaactttctctttcatactcacat 9395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 16121163 - 16121217
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  16121163 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatacttacat 16121217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 34792019 - 34792056
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34792019 ttagagaaatgatatttgtacaatcatttttgtacaac 34792056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 1196057 - 1196112
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  1196057 agagaaatgatatttgtacaatcactttttgacaactttctctctaatactcacat 1196112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 32644623 - 32644677
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||  ||||||  ||||| |||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatactcacat 32644677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 16865565 - 16865618
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| ||||||||||| |||| ||| || |||||||    
T  16865565 agaaatgatatttgtacaatcacttttgtacaactttctatcttatgctcacat 16865618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 3180064 - 3180009
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||  ||||| || ||||| ||| ||||||    
T  3180064 agagaaatgatatttgtacaatcattttttgacaactttatctcttatattcacat 3180009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31517241 - 31517186
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || ||||  ||||| || ||||||||||||||||    
T  31517241 agagaaatgatatttgtacaaccactttttgacaactttttctctcatactcacat 31517186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 6110577 - 6110528
Alignment:
Q  181 cattagagaaatgatatttgtacaatcatttttgtacaaccttctctctca 231  Q
    ||||||||||||||||||||||||||| |||||  ||||| ||||||||||    
T  6110577 cattagagaaatgatatttgtacaatc-tttttcgacaactttctctctca 6110528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 19712355 - 19712389
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||||| |||||||||||    
T  19712355 gagaaatgatatttgtacaatcacttttgtacaac 19712389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 27790306 - 27790272
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  27790306 gagaaatgatatttgtacaaccatttttgtacaac 27790272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 34792057 - 34792087
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  34792057 ttttgtacaaccttctctctcatactcacat 34792087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 2241886 - 2241825
Alignment:
Q  178 ttccattagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcaca 239  Q
    ||||| |||||||||||||||| ||||| || ||||  ||||| || |||||||||||||||    
T  2241886 ttccaatagagaaatgatatttatacaaccactttttgacaactttttctctcatactcaca 2241825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 9200116 - 9200173
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||| |||| |||||| ||||||||  ||||| |||||| ||||||||||||    
T  9200116 ttagagaaataatatatgtacattcattttttgacaactttctctttcatactcacat 9200173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 7636501 - 7636473
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttt 212  Q
    |||||||||||||||||||||||||||||    
T  7636501 tagagaaatgatatttgtacaatcatttt 7636473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 22422164 - 22422215
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||| |||||||||||    ||||||||||| |||||||||||||||||||    
T  22422164 gagaaatgttatttgtacaac---ttttgtacaactttctctctcatactcacat 22422215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 25995475 - 25995507
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  25995475 atttttgtacaactttctctctcatactcacat 25995507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 30714678 - 30714706
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttt 212  Q
    |||||||||||||||||||||||||||||    
T  30714678 tagagaaatgatatttgtacaatcatttt 30714706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 37848680 - 37848631
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatact 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37848680 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatact 37848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 5906026 - 5905971
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  5906026 agagaaatgatatttgtacaatcattttggtataactttctctctcatactcacat 5905971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 29923685 - 29923736
Alignment:
Q  189 aaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  29923685 aaatgacatttgtacaatcatttttgtacaactttctctctcatactcacat 29923736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 24380785 - 24380727
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||    
T  24380785 attagagaaatgatatttgtacaaccatttttatacaactttctttctcatactcacat 24380727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 27866597 - 27866543
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||||||||    
T  27866597 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcacat 27866543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 33465099 - 33465045
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgtacaattttctctctcatactcacat 33465045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 49142579 - 49142523
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||||||||||||||    
T  49142579 tagagaaatgatatttgtacaaccatttttgtaaaattttctctctcatactcacat 49142523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 40108134 - 40108189
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||| ||||||||| ||||||| |||||| |||||||||||||||||||    
T  40108134 agagaaatgatgtttgtacaaccatttttatacaactttctctctcatactcacat 40108189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 25272602 - 25272656
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||| |||||||  ||||||||||    
T  25272602 gagaaatgatatttgtacaaccatttttgtacaactttctctcatatactcacat 25272656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 21589932 - 21589987
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||| ||||||||||||| || ||| ||||||||||||    
T  21589932 agagaaatgatatctgtacaattatttttgtacaactttttctttcatactcacat 21589987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 41985161 - 41985106
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||| |||   ||||| |||||||||||||||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaactttctctctcatactcacat 41985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 41538515 - 41538547
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||||    
T  41538515 atttttgtacaaccttctctctcatactcacat 41538547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 1709282 - 1709317
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaa 219  Q
    |||||||||||||| |||||||||||||||||||||    
T  1709282 tagagaaatgatatctgtacaatcatttttgtacaa 1709317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 2323303 - 2323358
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||  |||||   ||||| |||||||||||||||||||    
T  2323303 agagaaatgatatttgtacaacaattttatgacaactttctctctcatactcacat 2323358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 2469702 - 2469757
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || |||   ||||| |||||||||||||||||||    
T  2469702 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacat 2469757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 6822594 - 6822539
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||   ||||| || ||||||||||||||||    
T  6822594 agagaaatgatatttgtacaaccattttctaacaactttttctctcatactcacat 6822539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 8459614 - 8459665
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    |||||||||||||||||||| || ||||  ||||| ||||||||||||||||    
T  8459614 gagaaatgatatttgtacaaccactttttaacaactttctctctcatactca 8459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 22330692 - 22330637
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || |||   ||||| |||||||||||||||||||    
T  22330692 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacat 22330637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 37352051 - 37351996
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || |||   ||||| |||||||||||||||||||    
T  37352051 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacat 37351996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 41989802 - 41989748
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||  |||| ||||||| |||||| |||||||||||||||||||    
T  41989802 agagaaatgatattttaacaaccattttt-tacaactttctctctcatactcacat 41989748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 43942648 - 43942702
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||| ||||  |||||| |||||| |||||||||||||||||||    
T  43942648 agagaaatgatatttgaacaactattttt-tacaactttctctctcatactcacat 43942702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 48522155 - 48522190
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  48522155 agagaaatgatatttgtacaaccatttttgtacaac 48522190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 48639455 - 48639420
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  48639455 agagaaatgatatttgtacaaccatttttgtacaac 48639420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 41538481 - 41538515
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaa 219  Q
    ||||||||||||||||||||| |||||||||||||    
T  41538481 agagaaatgatatttgtacaaccatttttgtacaa 41538515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 41910221 - 41910191
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  41910221 ttttgtacaaccttctctctcatactcacat 41910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 41910260 - 41910222
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  41910260 attagagtaatgatatttgtacaaccatttttgtacaac 41910222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 42552898 - 42552932
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaa 219  Q
    ||||||||||||||||||||||||||||| |||||    
T  42552898 agagaaatgatatttgtacaatcatttttatacaa 42552932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 45420124 - 45420066
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| ||||  ||||||  ||||| |||||||||||| ||||||    
T  45420124 attagagaaatgatatttgaacaactattttttgacaactttctctctcatattcacat 45420066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 47945018 - 47945048
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  47945018 ttttgtacaaccttctctctcatactcacat 47945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 47950448 - 47950478
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  47950448 ttttgtacaaccttctctctcatactcacat 47950478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 48639419 - 48639389
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  48639419 ttttgtacaaccttctctctcatactcacat 48639389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 22331246 - 22331217
Alignment:
Q  211 tttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||||||||||    
T  22331246 tttgtacaaccttctctctcatactcacat 22331217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 26749016 - 26749068
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcac 238  Q
    |||||||||||||||| ||||  ||||||| ||||| |||||||||||||||||    
T  26749016 agagaaatgatatttgaacaacaatttttg-acaactttctctctcatactcac 26749068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 34349097 - 34349064
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||| ||||||||||||||    
T  34349097 agaaatgatatttgtacaaccatttttgtacaac 34349064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 38547349 - 38547296
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||  ||||||  ||||| |||| ||||||||||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttctttctcatactcacat 38547296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 237026 - 237078
Alignment:
Q  188 gaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||   ||||| || ||||||||||||||||    
T  237026 gaaatgatatttgtacaatcaatttgtgacaactttatctctcatactcacat 237078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 640425 - 640457
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  640425 atttttgtacaactttctctctcatactcacat 640457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 11353034 - 11352979
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgt-acaaccttctctctcatactcacat 240  Q
    |||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||||||    
T  11353034 agagaaatgatatttgaaca-tcaattttgtgacaactttctctctcatactcacat 11352979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 17039190 - 17039222
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  17039190 atttttgtacaactttctctctcatactcacat 17039222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 23034383 - 23034351
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaa 219  Q
    ||||||||||||||||||| |||||||||||||    
T  23034383 agaaatgatatttgtacaaccatttttgtacaa 23034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 23848088 - 23848136
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcata 233  Q
    |||||||||||||||||| ||||||||||  ||||| |||||| |||||    
T  23848088 agagaaatgatatttgtataatcattttttaacaactttctctatcata 23848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 27570353 - 27570409
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||| ||||  ||||||  | ||| |||||||||||||||||||    
T  27570353 tagagaaatgatatttgaacaactattttttaataactttctctctcatactcacat 27570409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 41458938 - 41458906
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  41458938 atttttgtacaactttctctctcatactcacat 41458906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 38598406 - 38598355
Alignment:
Q  189 aaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  38598406 aaatgatatttgtataaccatttttgtacaaccttctctctcatactcacat 38598355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 22296193 - 22296135
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||| ||||||||||    
T  22296193 attagagaaatgatatttgtacaaccatttttgtacaattttctctctgatactcacat 22296135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 24727426 - 24727480
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatactcacat 24727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 27329170 - 27329121
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatac 234  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27329170 agagaaatgatatttgtacaatcattttggtacaactttctctctcatac 27329121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 13881105 - 13881160
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||    
T  13881105 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcacat 13881160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 14021230 - 14021285
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||    
T  14021230 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcacat 14021285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 27538976 - 27538922
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| |||||||||||||| |||||| | ||||||||||    
T  27538976 gagaaatgatatttgtacaaccatttttgtacaactttctctatgatactcacat 27538922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 45202192 - 45202138
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctcatattcacat 45202138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 11828877 - 11828828
Alignment:
Q  189 aaatgatatttgtacaatcatttttgtacaaccttctctctcatactcac 238  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  11828877 aaatgatatttgtacaaccatttttgtacaactttctctctcatattcac 11828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 43076312 - 43076361
Alignment:
Q  188 gaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  43076312 gaaatgatatttgtataatcatttttgtacaattttctctctcatactca 43076361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 44058727 - 44058780
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatact 235  Q
    ||||||||||||||||||||||||||||||||  | ||| ||||||||||||||    
T  44058727 attagagaaatgatatttgtacaatcattttttaataacgttctctctcatact 44058780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 22353237 - 22353181
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||   ||||| |||| ||||||||||||||    
T  22353237 tagagaaatgatatttgtacaatcattttgtgacaactttctttctcatactcacat 22353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 34141441 - 34141476
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||||||||||||||||||    
T  34141441 agagaaatgatatttgtacaatcatttttgtacaac 34141476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 285532 - 285478
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    |||||||||||||||||||||| ||||||| | ||||| ||||||| ||||||||    
T  285532 ttagagaaatgatatttgtacattcattttggaacaactttctctcgcatactca 285478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 8757555 - 8757609
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||| ||||||||||| ||||||| |||||| || ||||||||||||||||    
T  8757555 gagaaatgttatttgtacaaccatttttatacaactttatctctcatactcacat 8757609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 38777903 - 38777956
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||| ||||||||||||||||||||| |||||  |||||||||||| ||||||    
T  38777903 agaaaggatatttgtacaatcatttttatacaattttctctctcatattcacat 38777956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 43205106 - 43205158
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||    ||||||||||| |||||||||||||||||||    
T  43205106 agagaaatgatatttgtacaac---ttttgtacaacattctctctcatactcacat 43205158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 305044 - 304996
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcata 233  Q
    |||||||| |||||||||||| |||||| ||||||| ||||||||||||    
T  305044 agagaaattatatttgtacaaccattttggtacaactttctctctcata 304996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 11152775 - 11152743
Alignment:
Q  181 cattagagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||||||    
T  11152775 cattagagaaatgatatttgtacaatcattttt 11152743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 12256899 - 12256931
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgta 216  Q
    |||||||||||||||||||||||||||||||||    
T  12256899 tagagaaatgatatttgtacaatcatttttgta 12256931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 18749401 - 18749369
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||||    
T  18749401 atttttgtacaaccttctctctcatactcacat 18749369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 23141367 - 23141418
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||   |||||||||||  ||||||||||||||||||    
T  23141367 gagaaatgatatttgtacaat---ttttgtacaactgtctctctcatactcacat 23141418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 23553157 - 23553208
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||   |||||||||||  ||||||||||||||||||    
T  23553157 gagaaatgatatttgtacaat---ttttgtacaactgtctctctcatactcacat 23553208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 28679126 - 28679162
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||| ||||||||||||||||||||||||||||||||    
T  28679126 tagataaatgatatttgtacaatcatttttgtacaac 28679162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 33583280 - 33583225
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacatatt 243  Q
    |||||||||||||||| ||||||||||| ||||  |||||| |||||||||||||||    
T  33583280 agaaatgatatttgtataatcatttttg-acaattttctctttcatactcacatatt 33583225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43820814 - 43820778
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||||||||||| ||||||    
T  43820814 tagagaaatgatatttgtacaatcatttttttacaac 43820778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 306029 - 305978
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    |||||||||||||| ||||| |||||||||| ||| || |||||||||||||    
T  306029 gagaaatgatatttttacaaccatttttgtataactttttctctcatactca 305978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 4263924 - 4263870
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||  ||||| |||||| ||||||||||||    
T  4263924 agagaaatgatatttgtacaa-cattttttgacaactttctctttcatactcacat 4263870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 6215305 - 6215250
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| |||||  |||||  ||||||||||||| ||||||||||||    
T  6215305 agagaaatgatatttatacaactattttgttacaaccttctctttcatactcacat 6215250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 6885541 - 6885486
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||| |||||||||  |||||| |||||  |||||||||||||||||||    
T  6885541 agagaaatgatttttgtacaactatttttatacaattttctctctcatactcacat 6885486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 10550523 - 10550468
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    |||||||||||||||| |||||||  ||||||  ||||| ||||||||||||||||    
T  10550523 attagagaaatgatatatgtacaactattttttcacaactttctctctcatactca 10550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 12208441 - 12208476
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  12208441 agagaaatgatatttgtacaaccatttttgtacaac 12208476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 13453780 - 13453834
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||  |||||| ||||| || ||||||||||||||||    
T  13453780 agagaaatgatatttgtacaattttttttg-acaactttttctctcatactcacat 13453834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 19695752 - 19695697
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||| ||||  ||||| |||||||| ||| ||||||    
T  19695752 agagaaatgatatttgtacaatcactttttgacaactttctctcttatattcacat 19695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 29795446 - 29795501
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| ||||||   ||||| ||||||| |||||||||||    
T  29795446 agagaaatgatatttgtacaaccattttgtgacaactttctctcacatactcacat 29795501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 30339992 - 30340027
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaac 220  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30339992 agagaaatgatatttgtacaaccatttttgtacaac 30340027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 38724379 - 38724324
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||| ||| ||  |||||||||| ||||||||    
T  38724379 agagaaatgatatttgtacaaccattttagtataattttctctctcacactcacat 38724324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 40115525 - 40115580
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||  ||||||||| ||  |||||||||||||| ||||    
T  40115525 agagaaatgatatttgtacaactatttttgtataattttctctctcatactaacat 40115580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 42081047 - 42081102
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||  || ||||  ||||| |||||||||||||||||||    
T  42081047 agagaaatgatatttgtacagccactttttgacaactttctctctcatactcacat 42081102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 42607591 - 42607536
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||| |||||   ||||  |||||||||||||||||||    
T  42607591 agagaaatgatatttgtacaattattttgtgacaattttctctctcatactcacat 42607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 5852474 - 5852508
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  5852474 gagaaatgatatttgtacaaccatttttgtacaac 5852508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 5852509 - 5852539
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  5852509 ttttgtacaaccttctctctcatactcacat 5852539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 7121390 - 7121444
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||| || ||||||   ||||| |||||||||||||||||||    
T  7121390 gagaaatgatatttgtataaccattttgtaacaactttctctctcatactcacat 7121444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Original strand, 12256936 - 12256966
Alignment:
Q  210 ttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||    
T  12256936 ttttgtacaaccttctctctcatactcacat 12256966  T

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Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 37738036 - 37737983
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||| |||| |||||| | ||||| |||||||||||||||||||    
T  37738036 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactcacat 37737983  T

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Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 38600825 - 38600879
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||| ||||||  |||||||  ||||| |||||||||||||||||||    
T  38600825 gagaaatgatatatgtacatccattttttgacaactttctctctcatactcacat 38600879  T

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Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 44897626 - 44897660
Alignment:
Q  186 gagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  44897626 gagaaatgatatttgtacaaccatttttgtacaac 44897660  T

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Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 9647142 - 9647194
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactca 237  Q
    ||||||||||||||||| ||||  |||||| |||||| ||||||||||||||||    
T  9647142 tagagaaatgatatttgaacaactattttt-tacaactttctctctcatactca 9647194  T

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Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 237
Target Start/End: Complemental strand, 11152737 - 11152708
Alignment:
Q  208 atttttgtacaaccttctctctcatactca 237  Q
    ||||||||||||||||||||||||||||||    
T  11152737 atttttgtacaaccttctctctcatactca 11152708  T

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Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 15141470 - 15141527
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||   |||||   ||||| |||||||||||||||||||    
T  15141470 ttagagaaatgatatttgtacatctattttatgacaactttctctctcatactcacat 15141527  T

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Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 28013966 - 28014019
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcac 238  Q
    |||||||| |||||||||||| || ||||  ||||| |||||||||||||||||    
T  28013966 agagaaattatatttgtacaaccaatttttgacaactttctctctcatactcac 28014019  T

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Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 34913090 - 34913119
Alignment:
Q  184 tagagaaatgatatttgtacaatcattttt 213  Q
    ||||||||||||||||||||||||||||||    
T  34913090 tagagaaatgatatttgtacaatcattttt 34913119  T

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Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 37966364 - 37966421
Alignment:
Q  183 ttagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||||| || |||   ||||| || ||||||||||||||||    
T  37966364 ttagagaaatgatatttgtacaaccaatttgtgacaactttttctctcatactcacat 37966421  T

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Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 6049406 - 6049350
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgt-acaaccttctctctcatactcacat 240  Q
    ||||||||||||||||  ||| ||||||||| | ||| |||||||||||||||||||    
T  6049406 agagaaatgatatttgatcaaccatttttgtgataactttctctctcatactcacat 6049350  T

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Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 13850222 - 13850190
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  13850222 atttttgtacaactttctctctcatactcacat 13850190  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 24491738 - 24491683
Alignment:
Q  187 agaaatgatatttgtacaatca--tttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| ||  |||||||||||  ||||||||| |||||||||    
T  24491738 agaaatgatatttgtacaaccaattttttgtacaattttctctctcgtactcacat 24491683  T

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Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 26387932 - 26387896
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| |||| |||||||||    
T  26387932 tagagaaatgatatttgtacaaccattcttgtacaac 26387896  T

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Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 34144589 - 34144557
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  34144589 atttttgtacaactttctctctcatactcacat 34144557  T

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Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 34373038 - 34373070
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  34373038 atttttgtacaactttctctctcatactcacat 34373070  T

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Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 44484694 - 44484662
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  44484694 atttttgtacaactttctctctcatactcacat 44484662  T

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Target: scaffold0286 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 17048 - 17099
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactc 236  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  17048 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 17099  T

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Target: scaffold0054 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31661 - 31606
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||    
T  31661 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcacat 31606  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 48687 - 48719
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    |||||||||||||||||||||||||||||||||    
T  48687 atttttgtacaaccttctctctcatactcacat 48719  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Original strand, 48657 - 48687
Alignment:
Q  189 aaatgatatttgtacaatcatttttgtacaa 219  Q
    |||||||||||||||||||||||||||||||    
T  48657 aaatgatatttgtacaatcatttttgtacaa 48687  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 145059 - 145095
Alignment:
Q  184 tagagaaatgatatttgtacaatcatttttgtacaac 220  Q
    |||||||||||||||||||||| ||||||||||||||    
T  145059 tagagaaatgatatttgtacaaccatttttgtacaac 145095  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 3332 - 3277
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| || |||   ||||| |||||||||||||||||||    
T  3332 agagaaatgatatttgtacaaccactttctcacaactttctctctcatactcacat 3277  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 9922 - 9892
Alignment:
Q  183 ttagagaaatgatatttgtacaatcattttt 213  Q
    |||||||||||||||||||||||||||||||    
T  9922 ttagagaaatgatatttgtacaatcattttt 9892  T

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Target: scaffold0542 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 2850 - 2903
Alignment:
Q  182 attagagaaatgatatttgtacaatcatttttgtacaaccttctctctcatact 235  Q
    ||||||||||||||||||||||||||| |||  |||||  |||||| |||||||    
T  2850 attagagaaatgatatttgtacaatcaatttgatacaagtttctctttcatact 2903  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 11159 - 11212
Alignment:
Q  187 agaaatgatatttgtacaatcatttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||| |||||||| ||||| || ||||| ||||| ||||    
T  11159 agaaatgatatttgtacaaccatttttgaacaactttatctcttatacttacat 11212  T

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Target: scaffold0651 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 4884 - 4852
Alignment:
Q  208 atttttgtacaaccttctctctcatactcacat 240  Q
    ||||||||||||| |||||||||||||||||||    
T  4884 atttttgtacaactttctctctcatactcacat 4852  T

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Target: scaffold0318 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 18351 - 18295
Alignment:
Q  185 agagaaatgatatttgtacaatcatttttgt-acaaccttctctctcatactcacat 240  Q
    ||||||||||||||||||||| | ||||| | ||||| || ||||||||||||||||    
T  18351 agagaaatgatatttgtacaaccttttttttgacaactttatctctcatactcacat 18295  T

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