View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6973_high_39 (Length: 321)
Name: NF6973_high_39
Description: NF6973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6973_high_39 |
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Alignment Details
Target: chr8 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 32655317 - 32655618
Alignment:
| Q |
1 |
ggattaaaagttgacaaacacagaccattactttagacattaagaacaatgagcagtaaggttcaataactatctcatgactcggcctttcaagtggcca |
100 |
Q |
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| T |
32655317 |
ggattaaaagttgacaaacacagaccattactttagacattaagaacaatgagcagtaaggttcaataactatctcatgactcggcctttcaagtggcca |
32655416 |
T |
|
| Q |
101 |
aatgtaattatgaaaaattccccaacaaactagaaattaagcacacgaagaaagaacaaacaataacttaacgaggttcatacgatttggctcacatcac |
200 |
Q |
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| T |
32655417 |
aatgtaattatgaaaaattccccaacaaactagaaattaagcacacgaagaaagaacaaacaataacttaacgaggttcatacgatttggctcacatcac |
32655516 |
T |
|
| Q |
201 |
atccttggcaagaatataatttaccattaacaattaaaattaccacactcaatggatctctcacccaaaacacactcaagtaataattctcactgaaaaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32655517 |
atccttggcaagaatataatttaccattaacaattaaaattaccacactcaatggatctctcacccaaaacacactcaagtaataattatcactgaaaaa |
32655616 |
T |
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| Q |
301 |
tc |
302 |
Q |
| |
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|| |
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| T |
32655617 |
tc |
32655618 |
T |
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