View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6973_high_55 (Length: 243)
Name: NF6973_high_55
Description: NF6973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6973_high_55 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 35842081 - 35841850
Alignment:
| Q |
12 |
acatcacctacagaagaacttccataacaggacttgccattatcaagatctccacctctctgactgtctttacaatcggtagcaattgttgggtgcagaa |
111 |
Q |
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| T |
35842081 |
acatcacctacagaagaacttccataacaggacttgccattatcaagatctccacctctctgactgtctttacaatcggtagcaattgttgggtgcagaa |
35841982 |
T |
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| Q |
112 |
catttgattcttctgaaggctttagatcttcatcatctgctgttgtttcctgatagggagacaaatccatcggagaaaagccaccagaagattcaggggt |
211 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35841981 |
catttgattcttctgaagcctttagatcttcatcatctgctgttgtttcctgatagggagacaaatccatcggagaaaagccaccagaagattcaggggt |
35841882 |
T |
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| Q |
212 |
ttcaagtgaactgttttcttttggcaaatgat |
243 |
Q |
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|||||| ||||||||||||||||||||||||| |
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| T |
35841881 |
ttcaagcgaactgttttcttttggcaaatgat |
35841850 |
T |
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