View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6973_low_10 (Length: 649)

Name: NF6973_low_10
Description: NF6973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6973_low_10
NF6973_low_10
[»] chr1 (84 HSPs)
chr1 (255-410)||(34756429-34756584)
chr1 (255-407)||(50005084-50005236)
chr1 (255-407)||(38277420-38277571)
chr1 (253-407)||(15034664-15034818)
chr1 (255-374)||(40264068-40264187)
chr1 (253-404)||(44410319-44410470)
chr1 (253-407)||(4038075-4038229)
chr1 (254-374)||(32572960-32573080)
chr1 (258-404)||(28745805-28745950)
chr1 (257-407)||(27804269-27804419)
chr1 (253-407)||(15034659-15034813)
chr1 (253-407)||(4038080-4038234)
chr1 (253-374)||(23536067-23536188)
chr1 (291-407)||(45565399-45565515)
chr1 (277-374)||(37214843-37214939)
chr1 (253-407)||(34756427-34756581)
chr1 (253-407)||(38277415-38277568)
chr1 (253-407)||(50005079-50005233)
chr1 (253-374)||(27935523-27935644)
chr1 (255-408)||(28745799-28745951)
chr1 (253-407)||(27804270-27804424)
chr1 (253-342)||(30190206-30190295)
chr1 (291-382)||(5474437-5474528)
chr1 (253-339)||(25889158-25889243)
chr1 (291-407)||(23536072-23536188)
chr1 (328-407)||(8224773-8224852)
chr1 (328-407)||(24273209-24273288)
chr1 (328-407)||(28632575-28632653)
chr1 (328-407)||(26501068-26501147)
chr1 (256-374)||(45565397-45565515)
chr1 (291-407)||(40264068-40264184)
chr1 (328-403)||(37448390-37448465)
chr1 (325-407)||(6470672-6470754)
chr1 (337-407)||(30190220-30190290)
chr1 (325-407)||(31166315-31166397)
chr1 (330-407)||(37036940-37037017)
chr1 (291-403)||(32572960-32573072)
chr1 (253-328)||(8224768-8224843)
chr1 (253-328)||(24273218-24273293)
chr1 (256-319)||(37036956-37037019)
chr1 (328-403)||(44570687-44570762)
chr1 (328-407)||(47165201-47165280)
chr1 (325-407)||(43622964-43623046)
chr1 (253-407)||(44410311-44410465)
chr1 (253-328)||(6470684-6470759)
chr1 (295-374)||(17502222-17502301)
chr1 (253-328)||(26501077-26501152)
chr1 (253-320)||(31166310-31166377)
chr1 (328-407)||(49659222-49659300)
chr1 (255-328)||(28632584-28632656)
chr1 (328-405)||(37447891-37447968)
chr1 (328-395)||(946930-946997)
chr1 (340-407)||(32287934-32288001)
chr1 (328-407)||(39887132-39887211)
chr1 (253-328)||(47165210-47165285)
chr1 (337-407)||(27935569-27935639)
chr1 (333-395)||(29446767-29446828)
chr1 (291-389)||(37214842-37214939)
chr1 (325-374)||(15245480-15245529)
chr1 (255-328)||(34003379-34003452)
chr1 (328-407)||(946381-946458)
chr1 (253-316)||(29446750-29446813)
chr1 (253-323)||(10166499-10166569)
chr1 (325-407)||(10166504-10166586)
chr1 (328-394)||(31195474-31195540)
chr1 (253-319)||(32287940-32288006)
chr1 (262-328)||(37448399-37448465)
chr1 (253-323)||(43622981-43623051)
chr1 (328-385)||(15467952-15468009)
chr1 (271-328)||(31195474-31195531)
chr1 (325-382)||(47541974-47542031)
chr1 (337-401)||(25889169-25889232)
chr1 (260-328)||(37447900-37447968)
chr1 (291-370)||(17502222-17502301)
chr1 (328-407)||(34003382-34003461)
chr1 (253-328)||(49659217-49659291)
chr1 (328-407)||(51847857-51847935)
chr1 (253-283)||(17502198-17502228)
chr1 (328-394)||(32647319-32647385)
chr1 (328-374)||(37447348-37447394)
chr1 (262-328)||(44570687-44570753)
chr1 (328-374)||(44571239-44571285)
chr1 (295-341)||(47074177-47074223)
chr1 (329-374)||(32128068-32128113)
[»] chr4 (83 HSPs)
chr4 (253-407)||(15660183-15660337)
chr4 (255-404)||(10127976-10128125)
chr4 (255-400)||(42844555-42844700)
chr4 (255-374)||(26250911-26251030)
chr4 (253-408)||(28845875-28846030)
chr4 (253-407)||(7352817-7352971)
chr4 (253-385)||(857266-857398)
chr4 (253-407)||(41498494-41498649)
chr4 (253-404)||(1107051-1107203)
chr4 (255-407)||(7352814-7352966)
chr4 (253-407)||(15660188-15660342)
chr4 (253-407)||(4896648-4896786)
chr4 (253-374)||(11040968-11041088)
chr4 (253-351)||(49111373-49111471)
chr4 (315-407)||(36455912-36456004)
chr4 (258-407)||(28845876-28846025)
chr4 (295-407)||(14982285-14982396)
chr4 (280-407)||(857266-857393)
chr4 (253-407)||(10127979-10128133)
chr4 (291-407)||(26250914-26251030)
chr4 (253-407)||(1107056-1107211)
chr4 (328-407)||(31473854-31473933)
chr4 (255-407)||(4896653-4896789)
chr4 (328-407)||(10633037-10633116)
chr4 (253-407)||(42844543-42844697)
chr4 (337-407)||(49111396-49111466)
chr4 (328-404)||(1539649-1539725)
chr4 (291-407)||(4441342-4441449)
chr4 (328-407)||(2125862-2125941)
chr4 (338-407)||(1112610-1112679)
chr4 (339-407)||(11040973-11041040)
chr4 (253-328)||(2125857-2125932)
chr4 (255-322)||(31742778-31742845)
chr4 (253-407)||(41498489-41498644)
chr4 (253-323)||(1112605-1112675)
chr4 (253-323)||(31473849-31473919)
chr4 (295-341)||(46724195-46724241)
chr4 (328-385)||(29091164-29091221)
chr4 (334-407)||(36456007-36456080)
chr4 (328-392)||(35470142-35470206)
chr4 (253-353)||(36455907-36456007)
chr4 (335-406)||(1112704-1112775)
chr4 (526-629)||(2299394-2299497)
chr4 (256-323)||(10633035-10633102)
chr4 (328-407)||(16516176-16516255)
chr4 (253-319)||(5715744-5715810)
chr4 (341-407)||(5715749-5715815)
chr4 (343-404)||(11348327-11348388)
chr4 (253-370)||(14982280-14982396)
chr4 (254-310)||(4441338-4441394)
chr4 (328-387)||(41139498-41139557)
chr4 (261-323)||(1539649-1539711)
chr4 (328-406)||(9451121-9451199)
chr4 (328-382)||(26534523-26534577)
chr4 (253-310)||(11348339-11348396)
chr4 (330-407)||(55266852-55266929)
chr4 (328-404)||(19461725-19461801)
chr4 (253-328)||(1112706-1112781)
chr4 (329-380)||(16300209-16300260)
chr4 (364-407)||(31742875-31742918)
chr4 (328-407)||(46242533-46242612)
chr4 (337-407)||(467887-467955)
chr4 (253-307)||(16516171-16516225)
chr4 (365-407)||(42542979-42543021)
chr4 (328-374)||(42775643-42775689)
chr4 (253-302)||(31742874-31742923)
chr4 (253-310)||(36456028-36456085)
chr4 (326-394)||(12169037-12169104)
chr4 (255-319)||(19461743-19461807)
chr4 (343-407)||(31742781-31742845)
chr4 (253-336)||(467879-467960)
chr4 (315-374)||(12914060-12914119)
chr4 (279-322)||(21012499-21012542)
chr4 (253-328)||(35470122-35470197)
chr4 (328-407)||(42776642-42776721)
chr4 (299-341)||(32724961-32725003)
chr4 (377-407)||(47108323-47108353)
chr4 (328-374)||(53760779-53760825)
chr4 (253-323)||(55266864-55266934)
chr4 (336-393)||(10354361-10354418)
chr4 (255-300)||(42542979-42543024)
chr4 (280-328)||(29091164-29091212)
chr4 (328-406)||(31947596-31947675)
[»] chr8 (78 HSPs)
chr8 (255-407)||(3853621-3853773)
chr8 (255-407)||(3858079-3858231)
chr8 (255-395)||(13404829-13404969)
chr8 (253-407)||(17110869-17111023)
chr8 (253-407)||(17110874-17111028)
chr8 (253-407)||(3853616-3853770)
chr8 (253-407)||(3858074-3858228)
chr8 (253-407)||(33902672-33902825)
chr8 (253-333)||(37268086-37268166)
chr8 (270-407)||(40046809-40046932)
chr8 (291-407)||(14799999-14800114)
chr8 (328-407)||(24044965-24045044)
chr8 (295-374)||(42739969-42740048)
chr8 (314-407)||(4156228-4156321)
chr8 (270-407)||(13404832-13404969)
chr8 (328-407)||(23011739-23011818)
chr8 (328-407)||(29257350-29257429)
chr8 (328-407)||(29482806-29482885)
chr8 (328-407)||(33377296-33377375)
chr8 (328-407)||(44346677-44346756)
chr8 (328-407)||(44889359-44889438)
chr8 (337-407)||(42711364-42711434)
chr8 (253-328)||(24044960-24045035)
chr8 (328-407)||(35979003-35979082)
chr8 (291-382)||(38573433-38573524)
chr8 (253-395)||(40046804-40046932)
chr8 (329-407)||(33986009-33986087)
chr8 (253-374)||(42711324-42711439)
chr8 (253-310)||(14800062-14800119)
chr8 (253-407)||(33902667-33902820)
chr8 (327-407)||(11744717-11744797)
chr8 (255-310)||(4156269-4156324)
chr8 (328-395)||(8049271-8049338)
chr8 (328-407)||(28324661-28324740)
chr8 (253-316)||(31807409-31807471)
chr8 (328-407)||(36103106-36103185)
chr8 (329-407)||(14244-14321)
chr8 (253-311)||(14991692-14991750)
chr8 (257-374)||(30435250-30435365)
chr8 (328-407)||(515531-515610)
chr8 (253-328)||(11744727-11744802)
chr8 (253-328)||(23011734-23011809)
chr8 (253-328)||(29257359-29257434)
chr8 (253-328)||(33377305-33377380)
chr8 (253-328)||(44889354-44889429)
chr8 (329-407)||(9982642-9982719)
chr8 (253-323)||(33986004-33986074)
chr8 (337-407)||(37268091-37268161)
chr8 (354-407)||(14991697-14991750)
chr8 (253-310)||(28324688-28324745)
chr8 (255-328)||(29482815-29482888)
chr8 (328-392)||(15186816-15186880)
chr8 (355-407)||(31807414-31807465)
chr8 (328-379)||(13144616-13144667)
chr8 (257-328)||(44346686-44346757)
chr8 (253-323)||(14239-14308)
chr8 (348-406)||(8689138-8689196)
chr8 (328-374)||(26520438-26520484)
chr8 (328-374)||(30444932-30444978)
chr8 (328-374)||(34008819-34008865)
chr8 (253-319)||(36103101-36103167)
chr8 (270-322)||(8049271-8049323)
chr8 (367-407)||(27322687-27322727)
chr8 (253-301)||(32626069-32626117)
chr8 (256-328)||(35979012-35979084)
chr8 (328-407)||(1088276-1088355)
chr8 (253-328)||(9982637-9982711)
chr8 (364-403)||(32626069-32626108)
chr8 (328-395)||(35404741-35404808)
chr8 (253-319)||(515549-515615)
chr8 (377-407)||(26520469-26520499)
chr8 (328-374)||(29611408-29611454)
chr8 (253-318)||(1088295-1088360)
chr8 (338-379)||(8689207-8689248)
chr8 (328-385)||(21465572-21465629)
chr8 (253-298)||(27322687-27322732)
chr8 (358-407)||(30435251-30435300)
chr8 (338-374)||(7202885-7202921)
[»] chr2 (79 HSPs)
chr2 (255-407)||(41461517-41461669)
chr2 (253-407)||(14365700-14365853)
chr2 (295-407)||(27033495-27033607)
chr2 (253-407)||(784793-784947)
chr2 (253-374)||(14537199-14537320)
chr2 (253-404)||(11716408-11716550)
chr2 (253-407)||(41461520-41461674)
chr2 (253-407)||(14365705-14365858)
chr2 (253-392)||(784813-784952)
chr2 (291-407)||(11684604-11684711)
chr2 (291-407)||(14537204-14537320)
chr2 (255-338)||(44256181-44256263)
chr2 (291-407)||(10244182-10244298)
chr2 (335-407)||(17180302-17180374)
chr2 (328-407)||(10480124-10480203)
chr2 (328-407)||(11532242-11532321)
chr2 (328-407)||(11793900-11793979)
chr2 (253-320)||(17180297-17180364)
chr2 (261-407)||(11716413-11716550)
chr2 (328-407)||(769041-769120)
chr2 (328-407)||(1583798-1583877)
chr2 (291-374)||(11824718-11824801)
chr2 (328-407)||(13017784-13017863)
chr2 (328-407)||(33189246-33189325)
chr2 (255-328)||(11532251-11532324)
chr2 (255-328)||(11793897-11793970)
chr2 (253-370)||(27033490-27033607)
chr2 (291-374)||(3345783-3345867)
chr2 (328-404)||(30698289-30698365)
chr2 (328-407)||(11141310-11141389)
chr2 (253-379)||(14954266-14954393)
chr2 (328-407)||(45094460-45094539)
chr2 (329-407)||(28740601-28740679)
chr2 (325-406)||(40026070-40026151)
chr2 (253-328)||(10480119-10480194)
chr2 (253-328)||(17905654-17905729)
chr2 (328-407)||(35047668-35047747)
chr2 (337-407)||(17905659-17905729)
chr2 (257-310)||(11684603-11684656)
chr2 (328-385)||(32839637-32839694)
chr2 (328-404)||(3092290-3092366)
chr2 (328-392)||(39630245-39630308)
chr2 (253-328)||(769036-769111)
chr2 (253-328)||(1583807-1583882)
chr2 (253-328)||(13017779-13017854)
chr2 (330-421)||(30751338-30751428)
chr2 (253-328)||(33189255-33189330)
chr2 (253-328)||(35047677-35047752)
chr2 (328-386)||(7167656-7167714)
chr2 (253-323)||(11141305-11141375)
chr2 (328-406)||(11606719-11606797)
chr2 (337-407)||(44256191-44256260)
chr2 (253-307)||(45094490-45094544)
chr2 (253-310)||(10244177-10244234)
chr2 (328-407)||(7228001-7228080)
chr2 (329-376)||(11607257-11607304)
chr2 (256-319)||(28740599-28740662)
chr2 (328-374)||(8736430-8736476)
chr2 (328-406)||(29279008-29279086)
chr2 (261-323)||(30698289-30698351)
chr2 (254-316)||(30751356-30751418)
chr2 (259-328)||(40026070-40026139)
chr2 (284-407)||(14954271-14954395)
chr2 (328-372)||(44255674-44255718)
chr2 (325-392)||(740724-740791)
chr2 (329-376)||(11595355-11595402)
chr2 (289-328)||(11595355-11595394)
chr2 (253-316)||(39630225-39630288)
chr2 (253-307)||(7228031-7228085)
chr2 (377-407)||(8736461-8736491)
chr2 (328-374)||(20935744-20935790)
chr2 (342-407)||(8735849-8735914)
chr2 (337-374)||(11684674-11684711)
chr2 (253-302)||(11981580-11981629)
chr2 (325-374)||(21504488-21504537)
chr2 (366-407)||(39477976-39478017)
chr2 (279-323)||(7167670-7167714)
chr2 (338-386)||(11532169-11532217)
chr2 (280-328)||(32839646-32839694)
[»] chr6 (34 HSPs)
chr6 (253-407)||(9763017-9763171)
chr6 (255-407)||(6919710-6919861)
chr6 (291-407)||(9285652-9285768)
chr6 (253-392)||(776080-776219)
chr6 (253-407)||(6919713-6919866)
chr6 (255-407)||(9763014-9763166)
chr6 (253-374)||(9285647-9285768)
chr6 (328-407)||(34244969-34245048)
chr6 (338-407)||(15299510-15299578)
chr6 (253-392)||(776100-776239)
chr6 (328-407)||(13487280-13487359)
chr6 (328-407)||(28918170-28918249)
chr6 (328-407)||(29889423-29889502)
chr6 (328-407)||(1368482-1368561)
chr6 (328-407)||(15832471-15832550)
chr6 (325-407)||(6358237-6358319)
chr6 (340-394)||(15299417-15299471)
chr6 (253-319)||(34244987-34245053)
chr6 (348-407)||(8574700-8574759)
chr6 (348-407)||(8574760-8574819)
chr6 (253-328)||(29889432-29889507)
chr6 (253-323)||(13487275-13487345)
chr6 (257-323)||(15299514-15299579)
chr6 (253-323)||(28918165-28918235)
chr6 (253-310)||(8574695-8574752)
chr6 (253-310)||(8574767-8574824)
chr6 (328-385)||(34364770-34364827)
chr6 (253-328)||(1368477-1368552)
chr6 (328-385)||(9697489-9697546)
chr6 (372-407)||(33733437-33733472)
chr6 (257-323)||(15832470-15832536)
chr6 (329-374)||(1195371-1195416)
chr6 (271-323)||(15299417-15299469)
chr6 (253-293)||(33733432-33733472)
[»] chr7 (73 HSPs)
chr7 (253-407)||(5644682-5644836)
chr7 (253-407)||(29065824-29065978)
chr7 (253-406)||(21635885-21636038)
chr7 (253-407)||(40110742-40110897)
chr7 (253-407)||(2057395-2057549)
chr7 (255-382)||(46069421-46069545)
chr7 (255-407)||(43955522-43955671)
chr7 (253-407)||(43955517-43955668)
chr7 (253-407)||(34388270-34388424)
chr7 (253-407)||(49052786-49052936)
chr7 (253-382)||(44915195-44915324)
chr7 (253-407)||(40110737-40110892)
chr7 (253-407)||(2057400-2057554)
chr7 (253-407)||(5644677-5644831)
chr7 (253-407)||(29065819-29065973)
chr7 (253-407)||(34388265-34388419)
chr7 (325-407)||(31632727-31632809)
chr7 (253-374)||(40854007-40854129)
chr7 (328-407)||(23455222-23455301)
chr7 (328-407)||(26162112-26162191)
chr7 (328-407)||(35776930-35777009)
chr7 (328-407)||(28539143-28539222)
chr7 (257-407)||(49052791-49052937)
chr7 (328-407)||(6498740-6498819)
chr7 (253-328)||(35776939-35777014)
chr7 (328-407)||(39342617-39342696)
chr7 (290-407)||(44915200-44915317)
chr7 (259-403)||(21635894-21636038)
chr7 (328-407)||(9784906-9784985)
chr7 (328-407)||(14603237-14603316)
chr7 (328-407)||(23548586-23548665)
chr7 (328-407)||(25189201-25189280)
chr7 (253-328)||(26162121-26162196)
chr7 (253-328)||(31632722-31632797)
chr7 (328-407)||(35455809-35455888)
chr7 (328-410)||(43791094-43791174)
chr7 (343-407)||(34398938-34399003)
chr7 (328-407)||(22391562-22391641)
chr7 (257-328)||(23455231-23455302)
chr7 (253-328)||(28539152-28539227)
chr7 (328-407)||(29639190-29639269)
chr7 (328-407)||(30629062-30629141)
chr7 (253-319)||(6498758-6498824)
chr7 (253-319)||(25189219-25189285)
chr7 (253-322)||(34398938-34399008)
chr7 (291-407)||(40854007-40854124)
chr7 (328-407)||(18789221-18789300)
chr7 (253-328)||(29639199-29639274)
chr7 (253-328)||(39342626-39342701)
chr7 (286-407)||(46069424-46069542)
chr7 (328-393)||(3905634-3905699)
chr7 (254-323)||(9784920-9784989)
chr7 (253-310)||(14603264-14603321)
chr7 (253-310)||(35455804-35455861)
chr7 (255-323)||(22391576-22391644)
chr7 (328-392)||(30524275-30524339)
chr7 (253-328)||(18789230-18789305)
chr7 (253-328)||(23548595-23548670)
chr7 (253-300)||(29195709-29195756)
chr7 (253-380)||(46481978-46482104)
chr7 (328-374)||(32650611-32650657)
chr7 (329-385)||(18789544-18789600)
chr7 (355-403)||(22351874-22351922)
chr7 (279-323)||(43791116-43791160)
chr7 (328-374)||(14790151-14790197)
chr7 (328-374)||(45984378-45984424)
chr7 (328-374)||(45988738-45988784)
chr7 (255-304)||(18926812-18926861)
chr7 (251-284)||(19865564-19865597)
chr7 (253-310)||(30524255-30524312)
chr7 (262-310)||(22351874-22351922)
chr7 (338-386)||(29639119-29639167)
chr7 (338-386)||(31632828-31632876)
[»] chr3 (86 HSPs)
chr3 (272-404)||(31070415-31070546)
chr3 (253-407)||(44692827-44692981)
chr3 (253-374)||(46429434-46429555)
chr3 (253-407)||(9129349-9129503)
chr3 (253-407)||(9137456-9137610)
chr3 (253-370)||(47284268-47284385)
chr3 (253-407)||(5415783-5415937)
chr3 (286-407)||(44436263-44436384)
chr3 (255-362)||(39215888-39215995)
chr3 (253-407)||(9129344-9129498)
chr3 (253-407)||(9137451-9137605)
chr3 (255-382)||(42130694-42130821)
chr3 (253-407)||(44692822-44692976)
chr3 (253-374)||(28092214-28092335)
chr3 (253-374)||(27251932-27252053)
chr3 (253-407)||(5415788-5415942)
chr3 (253-379)||(44436258-44436384)
chr3 (291-406)||(28092220-28092335)
chr3 (261-393)||(31070415-31070546)
chr3 (328-407)||(21307520-21307599)
chr3 (336-407)||(46672799-46672870)
chr3 (332-407)||(49457348-49457423)
chr3 (328-407)||(53129831-53129910)
chr3 (337-407)||(27251978-27252048)
chr3 (253-362)||(46672772-46672875)
chr3 (330-407)||(36397979-36398056)
chr3 (291-374)||(332012-332096)
chr3 (291-407)||(46429434-46429550)
chr3 (328-407)||(7302351-7302430)
chr3 (253-344)||(39110394-39110485)
chr3 (328-407)||(47767437-47767516)
chr3 (328-404)||(19475824-19475900)
chr3 (328-407)||(31189385-31189464)
chr3 (328-407)||(37054399-37054478)
chr3 (328-407)||(42005941-42006020)
chr3 (328-407)||(48947610-48947689)
chr3 (328-407)||(53470417-53470496)
chr3 (328-394)||(30766571-30766637)
chr3 (330-407)||(34088576-34088653)
chr3 (253-310)||(49457343-49457400)
chr3 (328-404)||(671607-671683)
chr3 (328-400)||(7976560-7976632)
chr3 (343-407)||(47284316-47284380)
chr3 (257-328)||(21307529-21307600)
chr3 (291-374)||(25655335-25655418)
chr3 (253-328)||(36397986-36398061)
chr3 (253-328)||(53129840-53129915)
chr3 (337-407)||(39110399-39110469)
chr3 (253-323)||(47767432-47767502)
chr3 (253-322)||(31189400-31189469)
chr3 (358-407)||(35279920-35279969)
chr3 (253-309)||(7302346-7302402)
chr3 (295-407)||(39215880-39215992)
chr3 (253-309)||(46001364-46001420)
chr3 (253-328)||(37321550-37321625)
chr3 (328-407)||(52527041-52527120)
chr3 (253-323)||(37054394-37054464)
chr3 (253-307)||(42005971-42006025)
chr3 (253-323)||(53470431-53470501)
chr3 (286-407)||(42130697-42130818)
chr3 (253-328)||(34088571-34088646)
chr3 (337-404)||(37321558-37321625)
chr3 (257-307)||(35279920-35279970)
chr3 (325-374)||(38506861-38506910)
chr3 (253-310)||(46635857-46635914)
chr3 (253-309)||(671635-671691)
chr3 (315-407)||(40929613-40929704)
chr3 (343-407)||(46635862-46635926)
chr3 (328-379)||(8762159-8762210)
chr3 (261-328)||(19475824-19475891)
chr3 (253-316)||(21730902-21730965)
chr3 (328-388)||(46706674-46706736)
chr3 (253-284)||(47284226-47284257)
chr3 (253-328)||(48947605-48947680)
chr3 (328-395)||(50168598-50168665)
chr3 (328-374)||(2104772-2104818)
chr3 (328-378)||(13176550-13176600)
chr3 (328-378)||(13339451-13339501)
chr3 (325-407)||(21730907-21730988)
chr3 (348-406)||(44288467-44288525)
chr3 (337-374)||(332012-332049)
chr3 (257-310)||(1146960-1147013)
chr3 (271-328)||(30766571-30766628)
chr3 (328-404)||(30767112-30767189)
chr3 (338-386)||(19475923-19475971)
chr3 (255-322)||(34396510-34396578)
[»] scaffold0449 (2 HSPs)
scaffold0449 (17-229)||(4093-4286)
scaffold0449 (410-440)||(4312-4342)
[»] chr5 (92 HSPs)
chr5 (253-407)||(15373960-15374114)
chr5 (253-407)||(9764343-9764497)
chr5 (253-407)||(20523133-20523287)
chr5 (253-407)||(32389977-32390131)
chr5 (253-407)||(2316383-2316537)
chr5 (253-407)||(6634015-6634168)
chr5 (253-407)||(9764338-9764492)
chr5 (253-407)||(40809341-40809495)
chr5 (255-407)||(32389974-32390126)
chr5 (255-342)||(28828417-28828504)
chr5 (253-407)||(15373965-15374119)
chr5 (254-407)||(20523138-20523291)
chr5 (291-407)||(40643856-40643971)
chr5 (253-392)||(2316378-2316518)
chr5 (253-392)||(32470902-32471039)
chr5 (253-395)||(23091979-23092121)
chr5 (328-407)||(22766957-22767036)
chr5 (328-407)||(37722880-37722959)
chr5 (325-407)||(3563282-3563364)
chr5 (253-386)||(32470882-32471015)
chr5 (339-407)||(2721557-2721625)
chr5 (328-407)||(25935276-25935355)
chr5 (253-328)||(37722889-37722964)
chr5 (328-407)||(40090400-40090479)
chr5 (253-407)||(23091963-23092116)
chr5 (334-407)||(16515099-16515172)
chr5 (328-405)||(37145487-37145564)
chr5 (335-407)||(26281262-26281334)
chr5 (328-407)||(927307-927386)
chr5 (328-407)||(9894308-9894387)
chr5 (328-407)||(19533893-19533972)
chr5 (328-407)||(22303856-22303935)
chr5 (328-407)||(41762201-41762280)
chr5 (337-407)||(15804327-15804397)
chr5 (253-407)||(40809346-40809500)
chr5 (253-374)||(40643856-40643976)
chr5 (255-323)||(2721560-2721628)
chr5 (251-331)||(15804320-15804400)
chr5 (256-407)||(6634020-6634170)
chr5 (328-407)||(32250084-32250162)
chr5 (253-328)||(40090409-40090484)
chr5 (257-346)||(16515009-16515097)
chr5 (253-407)||(16515010-16515177)
chr5 (253-328)||(22766952-22767027)
chr5 (253-328)||(25935285-25935360)
chr5 (253-328)||(26281264-26281339)
chr5 (336-407)||(33245366-33245437)
chr5 (254-328)||(3563278-3563352)
chr5 (253-323)||(22303870-22303940)
chr5 (337-407)||(28828431-28828501)
chr5 (357-402)||(13243469-13243514)
chr5 (255-308)||(28828369-28828422)
chr5 (255-323)||(19533907-19533975)
chr5 (253-328)||(927302-927377)
chr5 (255-302)||(13243514-13243561)
chr5 (328-407)||(14834829-14834908)
chr5 (328-407)||(20320634-20320713)
chr5 (364-407)||(28828372-28828415)
chr5 (332-407)||(35379349-35379423)
chr5 (253-328)||(41762210-41762285)
chr5 (253-308)||(13243457-13243514)
chr5 (470-579)||(28101163-28101273)
chr5 (325-374)||(15270837-15270886)
chr5 (358-407)||(15804399-15804448)
chr5 (325-374)||(17542344-17542393)
chr5 (253-310)||(32250111-32250167)
chr5 (253-310)||(35379344-35379400)
chr5 (255-307)||(15804399-15804451)
chr5 (339-407)||(34982221-34982288)
chr5 (255-323)||(37145501-37145569)
chr5 (257-328)||(9894317-9894388)
chr5 (328-406)||(10314655-10314733)
chr5 (328-374)||(22305132-22305178)
chr5 (328-374)||(33146211-33146257)
chr5 (328-373)||(28490031-28490076)
chr5 (253-310)||(34982216-34982272)
chr5 (364-404)||(12991334-12991374)
chr5 (254-310)||(33245385-33245441)
chr5 (364-407)||(13243515-13243558)
chr5 (271-317)||(8255045-8255091)
chr5 (253-323)||(11601040-11601109)
chr5 (328-382)||(35111256-35111310)
chr5 (338-380)||(37241598-37241640)
chr5 (261-302)||(12991333-12991374)
chr5 (328-373)||(17492634-17492679)
chr5 (495-579)||(26640873-26640958)
chr5 (470-542)||(28103921-28103994)
chr5 (329-370)||(28489505-28489546)
chr5 (338-374)||(2550348-2550384)
chr5 (367-407)||(5658781-5658821)
chr5 (364-404)||(13064957-13064997)
chr5 (255-323)||(14834826-14834894)
[»] scaffold1562 (2 HSPs)
scaffold1562 (255-407)||(410-562)
scaffold1562 (253-407)||(405-559)
[»] scaffold1158 (2 HSPs)
scaffold1158 (255-407)||(2031-2183)
scaffold1158 (253-407)||(2034-2188)
[»] scaffold0044 (2 HSPs)
scaffold0044 (286-407)||(56307-56428)
scaffold0044 (257-382)||(56304-56429)
[»] scaffold0169 (2 HSPs)
scaffold0169 (328-407)||(4080-4159)
scaffold0169 (253-328)||(4075-4150)
[»] scaffold0048 (2 HSPs)
scaffold0048 (330-412)||(82943-83025)
scaffold0048 (255-328)||(82945-83018)
[»] scaffold0009 (4 HSPs)
scaffold0009 (333-407)||(42002-42076)
scaffold0009 (253-328)||(41997-42072)
scaffold0009 (355-407)||(42080-42132)
scaffold0009 (253-310)||(42080-42137)
[»] scaffold0400 (2 HSPs)
scaffold0400 (328-407)||(4487-4566)
scaffold0400 (254-328)||(4496-4570)
[»] scaffold0365 (2 HSPs)
scaffold0365 (328-407)||(5131-5210)
scaffold0365 (254-328)||(5140-5214)
[»] scaffold0129 (4 HSPs)
scaffold0129 (329-407)||(19203-19280)
scaffold0129 (255-328)||(19200-19272)
scaffold0129 (338-407)||(19784-19852)
scaffold0129 (255-323)||(19788-19855)
[»] scaffold0027 (2 HSPs)
scaffold0027 (328-393)||(10905-10970)
scaffold0027 (254-328)||(10887-10961)
[»] scaffold0318 (2 HSPs)
scaffold0318 (328-407)||(2872-2950)
scaffold0318 (253-316)||(2867-2930)
[»] scaffold0301 (2 HSPs)
scaffold0301 (328-407)||(7156-7235)
scaffold0301 (255-310)||(7153-7208)
[»] scaffold0337 (1 HSPs)
scaffold0337 (328-407)||(15855-15931)
[»] scaffold0065 (1 HSPs)
scaffold0065 (328-407)||(2897-2973)
[»] scaffold0790 (1 HSPs)
scaffold0790 (556-623)||(3448-3515)
[»] scaffold0240 (1 HSPs)
scaffold0240 (315-374)||(17561-17620)
[»] scaffold0002 (1 HSPs)
scaffold0002 (328-378)||(130388-130438)


Alignment Details
Target: chr1 (Bit Score: 128; Significance: 8e-66; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 255 - 410
Target Start/End: Complemental strand, 34756584 - 34756429
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 34756485  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactct 410  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34756484 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactct 34756429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 50005236 - 50005084
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 50005137  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  50005136 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacac 50005084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 38277571 - 38277420
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||     
T  38277571 agtgtgtttggatg-gggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtag 38277473  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||||||||||||||| |||| |||||||||||||    
T  38277472 ttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacac 38277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 15034818 - 15034664
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 15034719  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  15034718 agttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 15034664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 255 - 374
Target Start/End: Complemental strand, 40264187 - 40264068
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 40264088  T
Q  355 ttgaattcgctcaaaacatt 374  Q
    |||||||| |||||||||||    
T  40264087 ttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 253 - 404
Target Start/End: Complemental strand, 44410470 - 44410319
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||| |    
T  44410470 agagtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattcaattatttttgagtggattcagacaatagaattcacctcaaaat 44410371  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    | ||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  44410370 agttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaa 44410319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 4038075 - 4038229
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||||    
T  4038075 agagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagt 4038174  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  4038175 agttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 4038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 32573080 - 32572960
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagta 353  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagta 32572981  T
Q  354 attgaattcgctcaaaacatt 374  Q
     |||||||| |||||||||||    
T  32572980 gttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 258 - 404
Target Start/End: Complemental strand, 28745950 - 28745805
Alignment:
Q  258 gtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattg 357  Q
    ||||||||||||| ||||||||| ||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||    
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaa-taattg 28745852  T
Q  358 aattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    ||||| |||||| |||||||||||||||||| |||||| ||||||||    
T  28745851 aattccctcaaaccattacattccctcaaaatattcccccatccaaa 28745805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 257 - 407
Target Start/End: Original strand, 27804269 - 27804419
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaatt 356  Q
    |||||||||||| |||||| |||||||| |||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| || |||||| ||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagtt 27804368  T
Q  357 gaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||  || |||||||||||| ||||||||||||||  |||||||||||    
T  27804369 gaattccttctaaacattacatttcctcaaaacattcctccatccaaacac 27804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 15034659 - 15034813
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||    
T  15034659 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagt 15034758  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  15034759 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 15034813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 4038234 - 4038080
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagt 4038135  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||| || ||||||||    
T  4038134 agttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacac 4038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 23536067 - 23536188
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||| |||||    
T  23536067 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagt 23536166  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| |||||||||||    
T  23536167 agttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 45565515 - 45565399
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||| ||| || |||||||| ||||||||||||||||| |||||||||    
T  45565515 aatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaaca 45565416  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  45565415 ttcccccatccaaacac 45565399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 277 - 374
Target Start/End: Original strand, 37214843 - 37214939
Alignment:
Q  277 ttttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  37214843 ttttgaggtaatgtaatgttttgagagaattcaattattttgaggtggattcaaacaatagaattcacctc-aagtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 34756427 - 34756581
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||| ||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||||| |    
T  34756427 agagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 34756526  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||    
T  34756527 aattgaattccctcaaaacattatattacctcaaaatatttccccatccaaacac 34756581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 38277415 - 38277568
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| || ||||||||| |||  |    |  ||| ||||||||| |    
T  38277415 agagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctcaaaat 38277514  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  38277515 aattgaattccctcaaaacattacattacctcaaaatattccc-catccaaacac 38277568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 50005079 - 50005233
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||| |  ||||||||| |||| |    | |||| ||||||||| |    
T  50005079 agagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaaat 50005178  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||||||||||| |||||||| |||||  |||||||||||    
T  50005179 aattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacac 50005233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 27935644 - 27935523
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  | |||||||||||| ||||||||||||||||| ||||||| || |||||| || |||||||||||||||||||||| |||||    
T  27935644 agagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttgagttgaattcaaacaatagaattcacctgaaagt 27935545  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||  |||||||||||    
T  27935544 agttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 255 - 408
Target Start/End: Original strand, 28745799 - 28745951
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    ||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||| |||| |    | |||||||||||||| ||     
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaatta-tttaaggtgaattctattgtttgaattcacctcaaaatag 28745897  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacact 408  Q
    |||||||| ||||||| |||||||||||| |||| |||| ||||||||||||||    
T  28745898 ttgaattccctcaaaatattacattcccttaaaatattctctcatccaaacact 28745951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 27804424 - 27804270
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||| || ||||||||| || ||| || || |||| |    | |||||||||||||| |    
T  27804424 agagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaaat 27804325  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  27804324 agttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacac 27804270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 30190295 - 30190206
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 342  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaattcaaacaatagaattc 30190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 5474437 - 5474528
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 382  Q
    ||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  5474437 aatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 25889158 - 25889243
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaa 339  Q
    ||||||| || ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25889158 agagtgtattgggatgagggaatattttgaggtaat-taatgttttgaaggaattcaattattttgaggtggattcaaacaatagaa 25889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 23536188 - 23536072
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || ||| ||||| |||  |    | ||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  23536188 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 23536089  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  23536088 ttcccccatccaaacac 23536072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 8224852 - 8224773
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 8224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 24273209 - 24273288
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 24273288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 28632575 - 28632653
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacac 28632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 26501068 - 26501147
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 26501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 256 - 374
Target Start/End: Original strand, 45565397 - 45565515
Alignment:
Q  256 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaat 355  Q
    ||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| |||||| ||||| |||| |    |  |||||||||||||||| |    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagt 45565496  T
Q  356 tgaattcgctcaaaacatt 374  Q
    ||||||| |||||||||||    
T  45565497 tgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 40264068 - 40264184
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || |||||| || |||| |    | |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| |    
T  40264068 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 40264167  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  40264168 ttcccccatccaaacac 40264184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 403
Target Start/End: Original strand, 37448390 - 37448465
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 403  Q
    |||||||| |||||||| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 6470672 - 6470754
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||| |||| |||||||||| | |||||||| ||||||||||||||||| |||||||||||||  |||||||||||    
T  6470672 attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacac 6470754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 30190220 - 30190290
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||| || |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacac 30190290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 31166397 - 31166315
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||||||| |||||| || ||| ||||  |||||||||||||||  ||||||||||||||||||||||||||    
T  31166397 attcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacac 31166315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 37036940 - 37037017
Alignment:
Q  330 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| ||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  37036940 aacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacac 37037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 291 - 403
Target Start/End: Original strand, 32572960 - 32573072
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||  |||||||||| |||||||||||||||| |||||||| |    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaata 32573059  T
Q  391 ttccctcatccaa 403  Q
    ||||| |||||||    
T  32573060 ttcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 8224768 - 8224843
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| || || ||||| ||| ||||    
T  8224768 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattc 8224843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 24273293 - 24273218
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 24273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 37037019 - 37036956
Alignment:
Q  256 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttga 37036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 403
Target Start/End: Complemental strand, 44570762 - 44570687
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 403  Q
    |||||||| ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||| | |||||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 47165201 - 47165280
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||| |||||| |||||||| |||||||||||||||| |||||||||||| |  |||||||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacac 47165280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 43622964 - 43623046
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| |||  |||||||||||||||| || ||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  43622964 attcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacac 43623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 44410311 - 44410465
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||| |||||||| | |||| |||||||| ||||||||||||| || |||||||| |||||||||||| |||| |      |||| |||   ||| |    
T  44410311 agagtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgaggtgaattctattgtctgaatccactcaaaaat 44410410  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||| ||||||| |||||||| ||||||  ||||||||||    
T  44410411 aattgaattccctcaaaactttacattacctcaaaatattccccaatccaaacac 44410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 6470759 - 6470684
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||| |  ||||||||||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattc 6470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 17502222 - 17502301
Alignment:
Q  295 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||| |||||||| || ||||||||| ||||||| ||||||||||| || |||||| |||||||| |||||||||||    
T  17502222 ttttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 26501152 - 26501077
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  26501152 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 26501077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 31166310 - 31166377
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 320  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||| ||||| ||| |||||||||    
T  31166310 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgag 31166377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 49659300 - 49659222
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| || ||||| |||  |||||||||||||||||| |||||||| |||||||||||    
T  49659300 caaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattccc-catccaaacac 49659222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 28632656 - 28632584
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||| |||||||| || ||||||||| ||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaa-tactttgaggtgaattc 28632584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 37447891 - 37447968
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaac 405  Q
    |||||||| ||||||||||||| ||| ||||||||  |||||||||||||||||||| ||| ||||||  ||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 946997 - 946930
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    |||||||| |||||||||||| |||| |||||||  ||||||| | ||||||||||||||||||||||    
T  946997 caaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacattccc 946930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 32287934 - 32288001
Alignment:
Q  340 ttcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||| ||||  |||||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacac 32288001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 39887211 - 39887132
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||| |||||||| |||||||   ||||||||| | ||||||| |||||||||||||||| ||||||    
T  39887211 caaacaatggaattcacatcaaagtatttgaatttcttcaaaacatcatattcccttaaaacattccctcatctaaacac 39887132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 47165285 - 47165210
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  | ||| |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  47165285 agagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtgaattc 47165210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 27935569 - 27935639
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||||||||||| ||| |  |||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacac 27935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 29446828 - 29446767
Alignment:
Q  333 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    |||||||||||||| ||| || |||||||| |||||||||||||||||| |||||||||||||    
T  29446828 aatagaattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattccc 29446767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 37214939 - 37214842
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaac 389  Q
    |||||||||||||||||||| || || |||||| |||| |    | |||| ||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  37214939 aatgttttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 15245529 - 15245480
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  15245529 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 34003379 - 34003452
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| ||||||||| | ||||| |||| ||||||||| |||||| || ||||||||| ||||    
T  34003379 agtgtgtttggatgagtgaatattttaaagcaatataatattttgagggcattcaaatactttgaggtgaattc 34003452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 946458 - 946381
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||| | ||||||| || ||||| ||||||||| |||||||||||||| ||||  |||||||||||||    
T  946458 caaacaatagaattcatc-caaagtatttaaattccctcaaaacaatacattccctcaaagcatt-tctcatccaaacac 946381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 29446750 - 29446813
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 316  Q
    |||||||||||| | | |||||| |||||| | ||||||||||||||||||||||||| |||||    
T  29446750 agagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattcaactattt 29446813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 10166499 - 10166569
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||| |||| |||| ||| || |||||    
T  10166499 agagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaactcaaatatatttaggtg 10166569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 10166586 - 10166504
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||  ||||||||| ||  || |||| |||  ||||||||||||||| || |||||||||| |||||||||||||    
T  10166586 attcaaacaatgaaattcacctaaatatatttgagttccttcaaaacattacattaccacaaaacattctctcatccaaacac 10166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 31195540 - 31195474
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    |||||||| |||||||||||||| || || ||||  |||| |||||||||||||||||||| |||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcc 31195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 32288006 - 32287940
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||||||||||||||  ||||  |||||||| ||||||||||||||||| ||||||| || |||||    
T  32288006 agagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttga 32287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 37448465 - 37448399
Alignment:
Q  262 ttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| |||||||  |||||||||||||||||||||| || || ||||| ||| ||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaattc 37448399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 43623051 - 43622981
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||||  |||| || || |||||||||    
T  43623051 agagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtg 43622981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 15467952 - 15468009
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| ||||||||||||    
T  15467952 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 271 - 328
Target Start/End: Original strand, 31195474 - 31195531
Alignment:
Q  271 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| ||||||||||| ||||| |||| || |||||||||||| ||||    
T  31195474 ggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaattc 31195531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 47541974 - 47542031
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 382  Q
    |||||||||||  |||||||||||||||| || ||||| |||| ||||||||||||||    
T  47541974 attcaaacaatgaaattcacctcaaagtatttaaattctctcataacattacattccc 47542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 401
Target Start/End: Complemental strand, 25889232 - 25889169
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatcc 401  Q
    |||| ||||||||| |||||||||||  ||||||||||| ||| |||||||| ||||||||||||    
T  25889232 gaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcc 25889169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 37447968 - 37447900
Alignment:
Q  260 gtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||  |||||||||| |||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 37447900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 17502301 - 17502222
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaa 370  Q
    |||||||||||||||||||| || ||| || || |||| |  | | ||||||||||||||||| |||||||| |||||||    
T  17502301 aatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 34003461 - 34003382
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| ||| ||||||||||||||||| |||||| | ||||||| |||| ||| | | |||| |||| |||||||||||||    
T  34003461 caaataatggaattcacctcaaagtatttgaatgccctcaaaatattatattgctttaaaatattcactcatccaaacac 34003382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 49659217 - 49659291
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| | |||||| |||||||||||  ||||||||| || || ||||||||| ||||    
T  49659217 agagtgtgtttggatg-gggaatgtattgagggaatgtaatgttacgagggaatttaaatactttgaggtgaattc 49659291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 51847935 - 51847857
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| || |||||||||| |||||| |||||||   | ||||||||||||| ||||||||||||||  |||||||||||    
T  51847935 caaacgatggaattcacct-aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaacac 51847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 283
Target Start/End: Original strand, 17502198 - 17502228
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgag 283  Q
    |||||||||||||||||||||||||||||||    
T  17502198 agagtgtgtttggatgagggaatattttgag 17502228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 32647385 - 32647319
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    |||||||| | ||||||| ||||||| |||||||  ||||||||| |||||| | ||||||||||||    
T  32647385 caaacaatggtattcaccccaaagtatttgaatttcctcaaaacaatacatttcttcaaaacattcc 32647319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 37447348 - 37447394
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  37447348 caaacaatggaattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 44570687 - 44570753
Alignment:
Q  262 ttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||| | |||| |||||||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 44570753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 44571285 - 44571239
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  44571285 caaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 47074177 - 47074223
Alignment:
Q  295 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 341  Q
    |||||| ||||||||| || ||||||||| |||||||||||||||||    
T  47074177 ttttgaaggaattcaactactttgaggtgaattcaaacaatagaatt 47074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 32128113 - 32128068
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 3e-65; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 15660183 - 15660337
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  15660183 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagatggattcaaacaatagaattcagctcaaagt 15660282  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15660283 agttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 15660337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 255 - 404
Target Start/End: Original strand, 10127976 - 10128125
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 10128075  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  10128076 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaa 10128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 255 - 400
Target Start/End: Complemental strand, 42844700 - 42844555
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||     
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtag 42844601  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatc 400  Q
    ||||||||  |||||| |||||||||||||||||||||||| ||||    
T  42844600 ttgaattccttcaaaatattacattccctcaaaacattcccccatc 42844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 255 - 374
Target Start/End: Original strand, 26250911 - 26251030
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||     
T  26250911 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagtag 26251010  T
Q  355 ttgaattcgctcaaaacatt 374  Q
    |||||||| |||||||||||    
T  26251011 ttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 253 - 408
Target Start/End: Complemental strand, 28846030 - 28845875
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| || ||| |||||||| ||| ||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||||    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagt 28845931  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacact 408  Q
    | |||||||| ||| |||||||||||||||||||||||||||  ||||||||||||    
T  28845930 agttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacact 28845875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 7352971 - 7352817
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| || |||||  || |||||||||||||||||||||| ||| |    
T  7352971 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaat 7352872  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  7352871 agttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacac 7352817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 253 - 385
Target Start/End: Complemental strand, 857398 - 857266
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagt 857299  T
Q  353 aattgaattcgctcaaaacattacattccctca 385  Q
    | |||||||| ||||||||||||||||||||||    
T  857298 agttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 41498649 - 41498494
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  41498649 agagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtgaatttaaacaatagaattcaccttaaagt 41498550  T
Q  353 aattgaattcgctc-aaaacattacattccctcaaaacattccctcatccaaacac 407  Q
      |||||||| ||| |||||||||  ||| ||||||||| |||| |||||||||||    
T  41498549 ggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacac 41498494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 253 - 404
Target Start/End: Original strand, 1107051 - 1107203
Alignment:
Q  253 agagtgtgtttggatgagggaatattttga-ggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaag 351  Q
    ||||||||||||||||||| ||| |||| | || ||||||||||||||| ||||||||| || |||||| || |||||||||||||||||||||| | ||    
T  1107051 agagtgtgtttggatgaggaaatttttttaagggaatgtaatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcaccttagag 1107150  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    || |||||||| |||||||||||| |||||||||||| |||||| ||||||||    
T  1107151 tagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaa 1107203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 7352814 - 7352966
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| |||||| ||||| |||| |    | |||||||  ||||||||     
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtag 7352913  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  7352914 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 7352966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 15660342 - 15660188
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||| |    | |||| || |||||| |    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaat 15660243  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||||||||||| |||||||| ||||||  ||||||||||    
T  15660242 aattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacac 15660188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 4896648 - 4896786
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||                ||||||||||||||||    
T  4896648 agagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgag----------------gaattcacctcaaagt 4896731  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||| ||| || |||||||||||    
T  4896732 agttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacac 4896786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 11040968 - 11041088
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| || ||||||||| || ||||||||||||||||||  |||||    
T  11040968 agagtgtgtttggatg-gggaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtgaatccaaacaatagaattcaccataaagt 11041066  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| |||||||||||    
T  11041067 agttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 351
Target Start/End: Complemental strand, 49111471 - 49111373
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaag 351  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattcaaacaatagaattccccttaaag 49111373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 315 - 407
Target Start/End: Complemental strand, 36456004 - 36455912
Alignment:
Q  315 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  36456004 tttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacac 36455912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 258 - 407
Target Start/End: Original strand, 28845876 - 28846025
Alignment:
Q  258 gtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattg 357  Q
    |||||||||||  ||||| |||||||| |||||||||||| |||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttg 28845975  T
Q  358 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| |||||||||||| |||||||||||||||| || |||||||||||    
T  28845976 aattccctcaaaacattatattccctcaaaacatttccccatccaaacac 28846025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 295 - 407
Target Start/End: Complemental strand, 14982396 - 14982285
Alignment:
Q  295 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    |||||||||||||||| || ||||||||| ||||||| |||| ||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||    
T  14982396 ttttgagggaattcaactactttgaggtgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcc 14982298  T
Q  395 ctcatccaaacac 407  Q
      |||||||||||    
T  14982297 tccatccaaacac 14982285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 280 - 407
Target Start/End: Original strand, 857266 - 857393
Alignment:
Q  280 tgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 379  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||||||| ||||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacatt 857365  T
Q  380 ccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||| || |||||||||||    
T  857366 ccctcaaaacatttccccatccaaacac 857393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 10128133 - 10127979
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||| |||||||| |||||| |||||||  ||||||||||||||||||||||||| || |||||| || |||| |    | |||| ||||||||| |    
T  10128133 agagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaat 10128034  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||  ||||||||||||||| | |||||| |||||| |||||||||||    
T  10128033 aattgaattccttcaaaacattacattacttcaaaatattcccccatccaaacac 10127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 26251030 - 26250914
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || ||||||||| |||| |  | | |||| ||||||||| ||||||||||  |||||||||||||||| |||||||| |    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaata 26250931  T
Q  391 ttccctcatccaaacac 407  Q
    |||||||||||||||||    
T  26250930 ttccctcatccaaacac 26250914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 1107211 - 1107056
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||| || | | ||||| |||| |    | ||||||| ||||||||    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagt 1107112  T
Q  353 aattgaattcgctcaaaacattacattccc-tcaaaacattccctcatccaaacac 407  Q
    | ||||||||  |||||||||||||||||| | |||| ||| ||||||||||||||    
T  1107111 agttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacac 1107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 31473933 - 31473854
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31473854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 4896789 - 4896653
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||||| || ||||||||| |||                ||||||| |||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtgaatt----------------cctcaaaataa 4896706  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacac 4896653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 10633116 - 10633037
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 10633037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 42844543 - 42844697
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||| | |||| |||||| |||||||| |||||||| |||||| ||||||||| || ||||||||| |||| |    | |||| ||| ||||| |    
T  42844543 agagtgtgtatagatgggggaatgttttgagggaatgtaatattttgaaggaattcaactactttgaggtgaattctattgtttgaatccacttcaaaat 42844642  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| ||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  42844643 aattgatttccctcaaaacattacattacctcaaaatatttccccatccaaacac 42844697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 49111396 - 49111466
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49111466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 1539725 - 1539649
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 4441449 - 4441342
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||| ||||||| || ||||||||| |||||||||||||||||||| |         ||||||| |||||||||||||||||||||||||||    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcacgt---------tgaattccctcaaaacattacattccctcaaaaca 4441359  T
Q  391 ttccctcatccaaacac 407  Q
    ||||  |||||||||||    
T  4441358 ttccaccatccaaacac 4441342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 2125941 - 2125862
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||| |||||| |||||||||||    
T  2125941 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacac 2125862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 1112679 - 1112610
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||| |||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacac 1112610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 11041040 - 11040973
Alignment:
Q  339 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatattccc-catccaaacac 11040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 2125857 - 2125932
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 2125932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 31742778 - 31742845
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggt 322  Q
    ||||||||||||||  |||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattcaattattttgaggt 31742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 41498489 - 41498644
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt-gagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaag 351  Q
    |||||||||||||||| |||| | |||||||  ||  ||||||||| ||||||||||||  | ||| ||||| |||| |    |  |||||||||||||     
T  41498489 agagtgtgtttggatgggggattgttttgagagaaaataatgtttttgagggaattcaaccactttaaggtgaattctattgtttaaattcacctcaaaa 41498588  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||  |||||||||||||||||||||||| |||||  |||||||||||    
T  41498589 taattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacac 41498644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 1112605 - 1112675
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||| || |||||||||    
T  1112605 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtg 1112675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 31473849 - 31473919
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 31473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 46724241 - 46724195
Alignment:
Q  295 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46724241 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 46724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 29091221 - 29091164
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 36456007 - 36456080
Alignment:
Q  334 atagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||| |||||| |||||||  ||||||| |||||||||||||||||||||||  |||||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacac 36456080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 35470206 - 35470142
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  35470206 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatt 35470142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 36455907 - 36456007
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagt 36456006  T
Q  353 a 353  Q
    |    
T  36456007 a 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 1112704 - 1112775
Alignment:
Q  335 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||  |||||||||| ||| ||||||||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaaca 1112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 629
Target Start/End: Original strand, 2299394 - 2299497
Alignment:
Q  526 ggttgttcttctagcctttgttgcgtttcagttttgcgttggagtaatctggtttggttcacctcagctgtagcaagttttcgtgcaattttgcttctat 625  Q
    |||||||| ||| |||||||| ||| |||| |||| | ||||||||||||||||| ||||  ||||||||||||| | |||| ||||| ||||||||| |    
T  2299394 ggttgttcatctggcctttgtcgcgcttcactttttctttggagtaatctggtttagttccgctcagctgtagcaggctttcatgcaactttgcttctgt 2299493  T
Q  626 tgtg 629  Q
    ||||    
T  2299494 tgtg 2299497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 10633035 - 10633102
Alignment:
Q  256 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 10633102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 16516255 - 16516176
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| || ||||| |||||||| || |||||  ||||||||||||||||| ||||||||||||| |||||||||||    
T  16516255 caaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacac 16516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 5715744 - 5715810
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||| || |||||    
T  5715744 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttga 5715810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 5715815 - 5715749
Alignment:
Q  341 tcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| |||||||| |||||||  ||||||||||||||||  ||||||||||||||||||||||||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacac 5715749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 404
Target Start/End: Original strand, 11348327 - 11348388
Alignment:
Q  343 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    ||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaa 11348388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 14982280 - 14982396
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||| || || ||| ||||| |||   |   | ||||||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatttaactactttaaggtgaatt-ttatttttgaattcacctcaaagt 14982378  T
Q  353 aattgaattcgctcaaaa 370  Q
    | |||||||| |||||||    
T  14982379 agttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 4441338 - 4441394
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattcaa 4441394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 41139557 - 41139498
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaa 387  Q
    ||||||||||||||||||| |||||| |||||||  |||||||||||||||| |||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaa 41139498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 1539649 - 1539711
Alignment:
Q  261 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtg 1539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 9451121 - 9451199
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    ||||||||| |||| | || |||||| ||||| || |||||||||||||||| ||| |||||||||| |||||||||||    
T  9451121 caaacaataaaatttagctaaaagtatttgaactctctcaaaacattacattaccttaaaacattccttcatccaaaca 9451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 26534577 - 26534523
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 382  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattccc 26534523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 11348396 - 11348339
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||| |||||||| |||||| |||| ||| |||||||||||||||||||||||||    
T  11348396 agagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaa 11348339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 55266852 - 55266929
Alignment:
Q  330 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| ||||||||| |||||| |||||||| ||||||| |||| ||| |||||||||||||   |||||||||||    
T  55266852 aacaataaaattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacac 55266929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 19461725 - 19461801
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    |||||||||||||| |  ||||| || ||||||||||||||||||||||||| | |||||| ||| || ||||||||    
T  19461725 caaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaa 19461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 1112781 - 1112706
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||| |||||||||| ||| || |||||||  |||||||||||| |||||||||||| || ||||||||| ||||    
T  1112781 agagtttgtttggatggggggatgttttgagcaaatgtaatgtttcgagggaattcaactactttgaggtgaattc 1112706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattc 380  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 364 - 407
Target Start/End: Original strand, 31742875 - 31742918
Alignment:
Q  364 ctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  31742875 ctcaaaacattacattccctcaaaacattcctccatccaaacac 31742918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 46242533 - 46242612
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| ||  ||||  ||||||||||| ||| ||||||||||||  |||||| ||||||    
T  46242533 caaacaatggaattcacctcaaagtattttgattccttcaaaacattatatttcctcaaaacattgtctcatcaaaacac 46242612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 467887 - 467955
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||  |||||||| |||||||||||||||||| ||||||||||| | |||||||||||    
T  467887 gaattcacttcaaagtggttgaattc-ctcaaaacattacattccatcaaaacattctc-catccaaacac 467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 16516171 - 16516225
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 307  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||| ||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatt 16516225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 407
Target Start/End: Original strand, 42542979 - 42543021
Alignment:
Q  365 tcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacac 42543021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 31742923 - 31742874
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 302  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  31742923 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 31742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 36456085 - 36456028
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||||||||||||  ||||| |||||||| |||||||| |||||||| |||||||    
T  36456085 agagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaa 36456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 12169104 - 12169037
Alignment:
Q  326 ttcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    ||||||||| ||||||||| | ||| || |||||||  ||||||||||||| |||||||||||||||||    
T  12169104 ttcaaacaacagaattcactttaaaatagttgaattt-ctcaaaacattactttccctcaaaacattcc 12169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 19461807 - 19461743
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||| |||||||| || |||||||||| | |||||||||||||||| |||||||| || |||||    
T  19461807 agtgtttttggatggggaaatattttgaagtaatgtaatgttttgagcgaattcaaataatttga 19461743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 31742845 - 31742781
Alignment:
Q  343 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||| |||||||||||||| | ||| |||| |||||  |||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaacac 31742781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 467960 - 467879
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaata 336  Q
    |||||||||||||||| | |||| |||||| | ||||||||||||||| |||||||||  | ||||| ||| ||||||||||||    
T  467960 agagtgtgtttggatg-gagaatgttttgatggaatgtaatgttttga-ggaattcaaccactttgaagtgaattcaaacaata 467879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 12914060 - 12914119
Alignment:
Q  315 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||| |||||||||||| |||||| || ||| || |||||||| |||||||||||    
T  12914060 tttgaggtgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacatt 12914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 21012542 - 21012499
Alignment:
Q  279 ttgaggcaatgtaatgttttgagggaattcaattattttgaggt 322  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||    
T  21012542 ttgaggaaatgtaatgttatgagggaattcaaatattttgaggt 21012499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 35470122 - 35470197
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||| ||||  | ||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  35470122 agagtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 35470197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 42776721 - 42776642
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  ||||||||| |||||| |||||||  |||||||||||||||  ||| |||||||||   |||||||||||    
T  42776721 caaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacac 42776642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 341
Target Start/End: Original strand, 32724961 - 32725003
Alignment:
Q  299 gagggaattcaattattttgaggtggattcaaacaatagaatt 341  Q
    ||||||||||||||| |||||||||  ||||||||||||||||    
T  32724961 gagggaattcaattactttgaggtgagttcaaacaatagaatt 32725003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 407
Target Start/End: Complemental strand, 47108353 - 47108323
Alignment:
Q  377 attccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||||||||    
T  47108353 attccctcaaaacattccctcatccaaacac 47108323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 53760779 - 53760825
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||||||||| ||||| || |||||||| |||||||||||    
T  53760779 caaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 55266934 - 55266864
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||||||||||   |||| |||||||| ||| |||| |||||||||||||||| || ||| |||||    
T  55266934 agagtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattcaactactttaaggtg 55266864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 393
Target Start/End: Complemental strand, 10354418 - 10354361
Alignment:
Q  336 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 393  Q
    |||||||||||| || || || ||||  |||||||||||||||| |||||||||||||    
T  10354418 agaattcacctccaaatatttcaattttctcaaaacattacattacctcaaaacattc 10354361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 300  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 29091164 - 29091212
Alignment:
Q  280 tgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  29091164 tgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 29091212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 31947675 - 31947596
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattaca---ttccctcaaaacattccctcatccaaaca 406  Q
    |||||||| ||||||||||||  ||| |||||||| |||  |||||||||   |||||||||||||||| | ||||||||||    
T  31947675 caaacaatggaattcacctca--gtatttgaattccctcgtaacattacaatattccctcaaaacattctcccatccaaaca 31947596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 1e-61; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 3853773 - 3853621
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3853674  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  3853673 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 3853621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 3858231 - 3858079
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3858132  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  3858131 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 3858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 255 - 395
Target Start/End: Original strand, 13404829 - 13404969
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||     
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtag 13404928  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  13404929 ttgaattccctcaaaacattacattccctcaaaacattccc 13404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 17110869 - 17111023
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||||    
T  17110869 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagt 17110968  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||||||| |  |||||||||||    
T  17110969 agttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacac 17111023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 17111028 - 17110874
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  | ||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||    
T  17111028 agagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagt 17110929  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  17110928 agttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 17110874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 3853616 - 3853770
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| || ||||||||| |||| |    | |||| ||||||||| |    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 3853715  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| ||| |||||||||||| |||||||| ||| || |||||||||||    
T  3853716 aattgaattccctccaaacattacattacctcaaaatatttccccatccaaacac 3853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 3858074 - 3858228
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| || ||||||||| |||| |    | |||| ||||||||| |    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 3858173  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| ||| |||||||||||| |||||||| ||| || |||||||||||    
T  3858174 aattgaattccctccaaacattacattacctcaaaatatttccccatccaaacac 3858228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 33902825 - 33902672
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaat-tattttgaggtggattcaaa-caatagaattcacctcaaa 350  Q
    |||||||||| ||||| |||||| ||| |||| |||||  ||||||||||||||||||  || ||||||||| ||||||| ||||||||||||||  |||    
T  33902825 agagtgtgttgggatgggggaatgttt-gagggaatgttttgttttgagggaattcaaactactttgaggtgaattcaaaacaatagaattcacc--aaa 33902729  T
Q  351 gtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  33902728 gtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 33902672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 37268166 - 37268086
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaaca 333  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaaca 37268086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 270 - 407
Target Start/End: Complemental strand, 40046932 - 40046809
Alignment:
Q  270 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 369  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||              ||||||||| |||||||| ||||||    
T  40046932 gggaatgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaa--------------ctcaaagtagttgaattccctcaaa 40046847  T
Q  370 acattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||||||||||||   |||||||||||    
T  40046846 acattacattccctcaaaacattcatccatccaaacac 40046809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 14799999 - 14800114
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    ||||||||||||||||| || ||||| ||||||  ||||||||||| |||||||||  ||||| |||||||| ||||||||||||| ||||||||||| |    
T  14799999 aatgttttgagggaattaaactattt-gaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaata 14800097  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  14800098 ttcccccatccaaacac 14800114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 24045044 - 24044965
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacac 24044965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 42740048 - 42739969
Alignment:
Q  295 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||| |||||||||||    
T  42740048 ttttgagggaattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 314 - 407
Target Start/End: Original strand, 4156228 - 4156321
Alignment:
Q  314 ttttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| || ||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||| |||| | |||||||||||    
T  4156228 ttttgagttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacac 4156321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 270 - 407
Target Start/End: Complemental strand, 13404969 - 13404832
Alignment:
Q  270 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaa 369  Q
    |||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||  |    | |||| ||||||||| ||||||||||| ||||||    
T  13404969 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaa 13404870  T
Q  370 acattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||| ||| || |||||||||||    
T  13404869 acattacattacctcaaaatatttccccatccaaacac 13404832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 23011818 - 23011739
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| | | |||||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacac 23011739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 29257350 - 29257429
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  29257350 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 29257429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 29482806 - 29482885
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||| |||||||||||||||||| |||||||||||    
T  29482806 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacac 29482885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 33377296 - 33377375
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| || ||||||||||||||||||| |||||||||||    
T  33377296 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacac 33377375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 44346677 - 44346756
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  44346677 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 44346756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 44889438 - 44889359
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||| ||||||||||||||||||  |||||||||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacac 44889359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 42711364 - 42711434
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacac 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 24044960 - 24045035
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 24045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 35979003 - 35979082
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| |||  || |||||||||||||||||||||||  |||||||||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacac 35979082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 38573433 - 38573524
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 382  Q
    |||||||||||| ||||||| || ||| || || ||||||||||||||||||| ||||||||| |||||||  ||||||||| |||||||||    
T  38573433 aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactacattccc 38573524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 395
Target Start/End: Original strand, 40046804 - 40046932
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || |||||| ||              ||| ||||||||| |    
T  40046804 agagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttg--------------aatccacctcaaaat 40046889  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  40046890 aattgaattccctcaaaacattacattacctcaaaacattccc 40046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 33986087 - 33986009
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||  |||||||||||||||| |||||||| |||||||||||||||| | |||| |||||||| |||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacac 33986009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 42711439 - 42711324
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||||      || ||||| ||||||||    
T  42711439 agagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattca------agtattcaactcaaagt 42711346  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||  |||||||||||    
T  42711345 agttgaatttcctcaaaacatt 42711324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 14800119 - 14800062
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 14800062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 33902667 - 33902820
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc-aaacaatagaattcacctcaaag 351  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||  |||| |||| |     | |||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaag 33902764  T
Q  352 ta-attgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||  |||||||| |||||||||  |||||||||| |||||||||| ||||| |||||    
T  33902765 tagtttgaattccctcaaaacaaaacattccctc-aaacattcccccatcccaacac 33902820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 11744717 - 11744797
Alignment:
Q  327 tcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||| ||| || ||||||||  ||| |||||||||||||||| ||| |||| |||||||||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacac 11744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 4156324 - 4156269
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaa 4156269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 8049338 - 8049271
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    ||||||||  |||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  8049338 caaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccc 8049271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 28324661 - 28324740
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||| ||||| ||| ||||||||  ||||||||||||||||||||||||||||||  |||||||||||    
T  28324661 caaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacac 28324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 31807409 - 31807471
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 316  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||    
T  31807409 agagtgtgtttggatgagagaatgttttgagg-aatgtaatgttttgagggaattcaactattt 31807471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 36103185 - 36103106
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  ||||||| |||||||| |||||||  || ||||||||||||||||||||||||||||  |||||||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacac 36103106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 14321 - 14244
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||  |||||||| ||||||| |||||||| || |||||||||||||||||| |||||||||| |||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacattccc-catccaaacac 14244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 14991692 - 14991750
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaat 311  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||    
T  14991692 agagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaat 14991750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 374
Target Start/End: Original strand, 30435250 - 30435365
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaatt 356  Q
    ||||||||||||  | ||| |||||||| |||||||||||| ||||||||| || || |||||| || ||| ||||||||||||| |||| ||| || ||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatttaacta-tttgagttgaatttaaacaatagaatttaccttaaa-tagtt 30435347  T
Q  357 gaattcgctcaaaacatt 374  Q
    |||||| |||||||||||    
T  30435348 gaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 515531 - 515610
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  ||||||| |||||||| ||||| || || ||||||||||||||| ||||||||||||  |||||||||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacac 515610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 11744802 - 11744727
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||| ||||||||| || ||| ||||| ||||    
T  11744802 agagtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattcaactagtttaaggtgaattc 11744727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 23011734 - 23011809
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| | | |||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  23011734 agagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 23011809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 29257434 - 29257359
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 29257359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 33377380 - 33377305
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| ||| || |||||||||||||||||| || |||| |||| ||||    
T  33377380 agagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattc 33377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 44889354 - 44889429
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  ||||| |||||||| ||| ||||||||||||||||||||| || ||||| ||| ||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattc 44889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 9982719 - 9982642
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| |||||||||||||| || || ||||| |||||||||||||||| ||| ||||||||| | |||||||||||    
T  9982719 aaacaatggaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaacattctc-catccaaacac 9982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 33986004 - 33986074
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| | |||| | |||||||||||||||| |||||||| || |||||||||    
T  33986004 agagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtg 33986074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 37268091 - 37268161
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||| |||||||| ||||||  ||||||||||    
T  37268091 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacac 37268161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 354 - 407
Target Start/End: Complemental strand, 14991750 - 14991697
Alignment:
Q  354 attgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||||||| ||||||||||||||| |||||||||||    
T  14991750 attgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacac 14991697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 28324745 - 28324688
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||| |||||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaa 28324688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 29482888 - 29482815
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| |||||| |||||||| || ||| |||||||||||||||||| || |||| |||| ||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttggggtgaattc 29482815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 15186816 - 15186880
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    ||||||||||||||||||| ||| || |||||||  ||||||||||||||||  |||||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacattacattatctcaaaacatt 15186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 31807465 - 31807414
Alignment:
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  31807465 ttgaattccctcaaaacattacattcc-tcaaaacattctctcatccaaacac 31807414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 13144667 - 13144616
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 379  Q
    |||||||| ||||||||||||||||| |||||||| |||| |||||||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 44346757 - 44346686
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 44346686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 14239 - 14308
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||| ||||||||||| || |||| ||||    
T  14239 agagtgtgtttggatg-gggaatgtttggagggaatgtaatgttttaagggaattcaaatactttggggtg 14308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 8689196 - 8689138
Alignment:
Q  348 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    |||||| |||||||| |||||||||||||||||| |||||||||| |  ||||||||||    
T  8689196 aaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 36103101 - 36103167
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||| ||| ||||||| || |||||    
T  36103101 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttga 36103167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 8049271 - 8049323
Alignment:
Q  270 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggt 322  Q
    |||||| |||||||| ||| ||||||||||||||||||||| || ||||||||    
T  8049271 gggaatgttttgagggaatataatgttttgagggaattcaaatactttgaggt 8049323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 27322687 - 27322727
Alignment:
Q  367 aaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacac 27322727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 32626117 - 32626069
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 301  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||||||    
T  32626117 agagtgtgcttggatgggggaatcttttgagggaatgtaatgttttgag 32626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 35979084 - 35979012
Alignment:
Q  256 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||  ||||| |||||||| |||||||| ||  |||||||||||| || ||||||||| ||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgaggtgaattc 35979012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 1088276 - 1088355
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||| ||| |||| || |||||||  ||||||||| ||||||| |||||||||||||  || ||||||||    
T  1088276 caaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacac 1088355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 9982637 - 9982711
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||| ||||||||||| | |||| |||| ||| |||||||||||||||| ||||| || |||||||||||| ||||    
T  9982637 agagcgtgtttggatg-gagaatgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattc 9982711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 403
Target Start/End: Original strand, 32626069 - 32626108
Alignment:
Q  364 ctcaaaacattacattccctcaaaacattccctcatccaa 403  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaa 32626108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 35404741 - 35404808
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    |||||| || |||||||||||||||| |||||||  ||||||| |||||||| ||||  |||||||||    
T  35404741 caaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattacattacctcgtaacattccc 35404808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 515615 - 515549
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||||||||||||||  ||||| |||||| | ||||||||||||| ||||| ||||| || |||||    
T  515615 agagtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttga 515549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 407
Target Start/End: Original strand, 26520469 - 26520499
Alignment:
Q  377 attccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||||||||    
T  26520469 attccctcaaaacattccctcatccaaacac 26520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 29611454 - 29611408
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||    
T  29611454 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 1088360 - 1088295
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttg 318  Q
    ||||||||||||| ||  ||||| |||||||  |||||| |||||||||| ||||||| |||||||    
T  1088360 agagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaaatattttg 1088295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 8689207 - 8689248
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacatt 379  Q
    |||||| || ||||||||||||||| ||||||||||||||||    
T  8689207 aattcaacttaaagtaattgaattccctcaaaacattacatt 8689248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 21465572 - 21465629
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    |||||||| ||||| ||||||||||| |||||||| |||  || ||||||||||||||    
T  21465572 caaacaatggaattaacctcaaagtatttgaattccctcgtaaaattacattccctca 21465629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 27322732 - 27322687
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 298  Q
    |||||||||||||||| | |||| |||||||| |||||||||||||    
T  27322732 agagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 30435300 - 30435251
Alignment:
Q  358 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| ||| ||||||||||||||||||||||||| |  |||||||||||    
T  30435300 aattccctccaaacattacattccctcaaaacatttctccatccaaacac 30435251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||||||| |||||||| |||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 41461517 - 41461669
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||     
T  41461517 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaacaatagaattcacctcaaaatag 41461616  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  41461617 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 41461669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 14365700 - 14365853
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc-aaacaatagaattcacctcaaag 351  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||  |||||    
T  14365700 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcac--caaag 14365797  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    || |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  14365798 tagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 14365853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 295 - 407
Target Start/End: Complemental strand, 27033607 - 27033495
Alignment:
Q  295 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  27033607 ttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcc 27033508  T
Q  395 ctcatccaaacac 407  Q
    | |||||||||||    
T  27033507 cccatccaaacac 27033495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 784793 - 784947
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||    ||| |||||||| ||||||||||||||| |||||| || || |||||| || |||||||||||||||||||||| |||||    
T  784793 agagtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagt 784892  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||| |||||| |||||| |||||||||||    
T  784893 agttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacac 784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 14537199 - 14537320
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||| |||||    
T  14537199 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 14537298  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| |||||||||||    
T  14537299 agttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 253 - 404
Target Start/End: Original strand, 11716408 - 11716550
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||           
T  11716408 agagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacc------- 11716500  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
      |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  11716501 --ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 41461674 - 41461520
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| |    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 41461575  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| ||||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  41461574 aattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 41461520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 14365858 - 14365705
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaata-gaattcacctcaaag 351  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || ||||  ||| |||| |    |  |||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg--gtgaattctattgttttgaattcacctcaaag 14365761  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    || |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  14365760 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 14365705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 253 - 392
Target Start/End: Complemental strand, 784952 - 784813
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagt 784853  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    | || |||||  ||||||||||||||||||||||||||||    
T  784852 agttaaattccttcaaaacattacattccctcaaaacatt 784813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 11684711 - 11684604
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct---------tgaattccctcaaaacattacattccctcaaaaca 11684621  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  11684620 ttcccccatccaaacac 11684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 14537320 - 14537204
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  14537320 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaaca 14537221  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  14537220 ttcccccatccaaacac 14537204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 44256263 - 44256181
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataga 338  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgaggtgaattcaaacaataga 44256181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 10244298 - 10244182
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||| ||||||||||| || |||||||||  ||||||||||| |||||||||  ||||| |||||||| ||||||||||||| |||||||| || |    
T  10244298 aatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaata 10244199  T
Q  391 ttccctcatccaaacac 407  Q
    ||| | |||||||||||    
T  10244198 ttctcccatccaaacac 10244182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 17180374 - 17180302
Alignment:
Q  335 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 17180302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 10480203 - 10480124
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| |||  ||||||||||||||||||||||||||| |||||||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacac 10480124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 11532242 - 11532321
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||| |||||||||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacac 11532321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 11793979 - 11793900
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||| |||||| |||||||||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacac 11793900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 17180297 - 17180364
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 320  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  17180297 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgag 17180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 261 - 407
Target Start/End: Complemental strand, 11716550 - 11716413
Alignment:
Q  261 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaat 360  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||||         |||| |||| |    | ||||||||||||||||| ||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa---------ggtgaattctattgtttgaattcacctcaaagtagttgaat 11716460  T
Q  361 tcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    || ||||||||||||||||||||||||||||||   |||||||||||    
T  11716459 tccctcaaaacattacattccctcaaaacattcttccatccaaacac 11716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 769120 - 769041
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  769120 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 769041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 1583798 - 1583877
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  1583798 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 1583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 11824718 - 11824801
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||||||||||| || |||||| || |||||||||||| ||||||||| |||||| |||||||| |||||||||||    
T  11824718 aatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 13017863 - 13017784
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| || |||| ||||||||||||||||||||| || |||||||||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacac 13017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 33189246 - 33189325
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  33189246 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 33189325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 11532324 - 11532251
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 11532251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 11793897 - 11793970
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 11793970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 27033490 - 27033607
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||      
T  27033490 agagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaag 27033589  T
Q  353 aattgaattcgctcaaaa 370  Q
    |||||||||| |||||||    
T  27033590 aattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 3345867 - 3345783
Alignment:
Q  291 aatgttttgagggaattcaat-tattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||||||||||||  || ||||||||| ||||||||||||||||| |||| |||||| |||||||| |||||||||||    
T  3345867 aatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 30698365 - 30698289
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  30698365 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 11141389 - 11141310
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  11141389 caaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 11141310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 379
Target Start/End: Original strand, 14954266 - 14954393
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaag 351  Q
    |||||||||||||||   ||||| |||||||  |||||||| |||| || |||||||| || ||| | ||  ||||||| ||||||||||||||| ||||    
T  14954266 agagtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattcaactactttaaagtaaattcaaaacaatagaattcaccttaaag 14954365  T
Q  352 taattgaattcgctcaaaacattacatt 379  Q
    || |||||||| ||||||||||||||||    
T  14954366 tagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 45094460 - 45094539
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||| | |||||| || ||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  45094460 caaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacac 45094539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 28740679 - 28740601
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| ||||| || |||||||| |||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacac 28740601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 325 - 406
Target Start/End: Complemental strand, 40026151 - 40026070
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    ||||||||||||||||||||||||||||| || ||||  |||||||||||| ||| |||||||| |||||| ||| ||||||    
T  40026151 attcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 10480119 - 10480194
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||||||||  |||||||||||| || ||||||||| ||||    
T  10480119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaattc 10480194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 17905654 - 17905729
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||| |||||||||||| |||||||  ||||||||||||| | ||||||||| |||||||||||| ||||    
T  17905654 agagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattc 17905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 35047668 - 35047747
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| | ||||||||| ||||||| |||||||| || |||||| |||||| ||||||||||||||| |||||||||||    
T  35047668 caaacattggaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacac 35047747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 17905729 - 17905659
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||| || ||||||||  | |||||||||||||| |||||||||||||||||||| |||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacac 17905659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 11684603 - 11684656
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 32839637 - 32839694
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 3092366 - 3092290
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    |||||||| ||||| ||| ||||||| |||||||  ||||||||| |||||||||||||||||||||  ||||||||    
T  3092366 caaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaa 3092290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 39630308 - 39630245
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    ||||||||||||||| ||||||| || |||||||| ||||||||| |||||||||||||||||||    
T  39630308 caaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatt 39630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 769036 - 769111
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  769036 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 769111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 1583882 - 1583807
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 1583807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 13017779 - 13017854
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| || ||| |||||||| |||||||| |||| ||||||||||| || ||||||||| ||||    
T  13017779 agagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaattc 13017854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 421
Target Start/End: Original strand, 30751338 - 30751428
Alignment:
Q  330 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactctgagggattttt 421  Q
    |||||||||||||| || ||| || || ||||| ||||||||||||||||  |||||||||||| ||||||||||||| || | ||||||||    
T  30751338 aacaatagaattcatcttaaa-tatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactcatggattttt 30751428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 33189330 - 33189255
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  33189330 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 33189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 35047752 - 35047677
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  35047752 agagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttggggtgaattc 35047677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 7167656 - 7167714
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 386  Q
    ||||||||  |||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 11141305 - 11141375
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| ||||    
T  11141305 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtg 11141375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 11606797 - 11606719
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    ||||||||  |||||||||||||||| ||| ||||  | |||| |||||||||| ||||||||||||||||||| ||||    
T  11606797 caaacaattaaattcacctcaaagtatttgtattccttgaaaatattacattccttcaaaacattccctcatcctaaca 11606719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 44256191 - 44256260
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||| |||| |||||| |||||||||||||||| |||| ||| |||||| |||||||||||    
T  44256191 gaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacac 44256260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 45094544 - 45094490
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 307  Q
    |||||||||||| |||||||||| |||||||| ||| ||||||||||||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatt 45094490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 10244177 - 10244234
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| | ||||||| ||||| || ||||||||||||||||||||||    
T  10244177 agagtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattcaa 10244234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 7228001 - 7228080
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||| ||||||| ||| || |||||  |||||||||||||||| ||||||||||| || |||||||||||    
T  7228001 caaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacac 7228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 376  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 28740599 - 28740662
Alignment:
Q  256 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||||||| ||| || ||| |||||||| ||||||||||||||||||||||||| || |||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 28740662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 29279008 - 29279086
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    |||||||||||||| | |  || ||| |||||||  ||| |||||||||||| |||||||||||||| |||||||||||    
T  29279008 caaacaatagaatttagcaaaatgtatttgaattatctcgaaacattacattacctcaaaacattccttcatccaaaca 29279086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 30698289 - 30698351
Alignment:
Q  261 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||| |||||| |||||||| ||||||||||||||| ||||||||| ||  ||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 30698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 30751418 - 30751356
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 316  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||||| ||||| || |||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttgagtgaatttaaatattt 30751356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 40026070 - 40026139
Alignment:
Q  259 tgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||| ||| ||||||||||||||| ||| ||||||||||||| |||| || || ||||||||| ||||    
T  40026070 tgtttgaatgggggaatattttgaggtaatataatgttttgaggaaatttaaatactttgaggtgaattc 40026139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 407
Target Start/End: Complemental strand, 14954395 - 14954271
Alignment:
Q  284 gcaatgtaatgttttgagggaattcaattattttgaggtggattc-aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 382  Q
    ||||||||||||||||||||||||||| || ||| ||||| |||| |     | ||||| || | |||||| |||||||| || |||| ||||||||| |    
T  14954395 gcaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcac 14954296  T
Q  383 tcaaaacattccctcatccaaacac 407  Q
    ||||||||||||   ||||||||||    
T  14954295 tcaaaacattcctctatccaaacac 14954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaaca 372  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 740791 - 740724
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    |||||||||||| |||||||||||||  |  ||||||| | ||||||||||||||  |||||||||||    
T  740791 attcaaacaataaaattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaacatt 740724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattac 376  Q
    ||||||| |||||||||||||| || |||||||| |||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 11595355 - 11595394
Alignment:
Q  289 gtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  11595355 gtaatgttttgagggaattcaaatattttgaggtgaattc 11595394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 39630225 - 39630288
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 316  Q
    |||||||||||| |||  | ||| |||||||| |||||| |||||||||||||||||| |||||    
T  39630225 agagtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaaatattt 39630288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 7228085 - 7228031
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 307  Q
    |||||||||||||||| || ||| |||||||  ||||||||||||||| ||||||    
T  7228085 agagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatt 7228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 407
Target Start/End: Original strand, 8736461 - 8736491
Alignment:
Q  377 attccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||||||||    
T  8736461 attccctcaaaacattccctcatccaaacac 8736491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 20935790 - 20935744
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||    
T  20935790 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 8735914 - 8735849
Alignment:
Q  342 cacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||| |||||||| |||  ||||||| |||||||||||||||   | |||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacac 8735849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 11981629 - 11981580
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 302  Q
    |||||||||||||||||  |||||||||  || |||||||||||||||||    
T  11981629 agagtgtgtttggatgaaagaatattttagggtaatgtaatgttttgagg 11981580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 21504537 - 21504488
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||| ||||||| |||||| || |||||||| |||||||||||    
T  21504537 attcaaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 407
Target Start/End: Original strand, 39477976 - 39478017
Alignment:
Q  366 caaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||| ||||||||||||| | |||||||||||    
T  39477976 caaaacattacattacctcaaaacattctcacatccaaacac 39478017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 7167714 - 7167670
Alignment:
Q  279 ttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||| ||||||||||||||| ||||||||| || |||||||||    
T  7167714 ttgagggaatgtaatgttttgaaggaattcaaatactttgaggtg 7167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 11532169 - 11532217
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 386  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  11532169 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 11532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 32839694 - 32839646
Alignment:
Q  280 tgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  32839694 tgagggaatgtaatgttttgagggaattcaaatactttgacgtgaattc 32839646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 2e-60; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 9763171 - 9763017
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9763171 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaagt 9763072  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||||||| || | |||||||||    
T  9763071 agttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacac 9763017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 6919710 - 6919861
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    ||||||||||||||  |||||  ||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||| |      
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tgg 6919808  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  6919809 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacac 6919861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 9285768 - 9285652
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || |||||| || ||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  9285768 aatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9285669  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  9285668 ttcccccatccaaacac 9285652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 253 - 392
Target Start/End: Original strand, 776080 - 776219
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||| ||||  | ||| |||||||| ||||||||||||||||| ||||||| || ||| || |  |||||||||||||||||||||| |||||    
T  776080 agagtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagt 776179  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    | |||||||  |||||||||||||||||||||||||||||    
T  776180 agttgaatttcctcaaaacattacattccctcaaaacatt 776219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 6919866 - 6919713
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||  ||||  ||||| |||| |    | ||||||||||||||||    
T  6919866 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccattta-aggtgaattctattgtttgaattcacctcaaagt 6919768  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  6919767 agttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacac 6919713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 9763014 - 9763166
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||| | || ||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||| | |||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataa 9763113  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||||| |||||||| |||||  |||||||||||    
T  9763114 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacac 9763166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 9285647 - 9285768
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||| || |||| |    | ||||||| ||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagt 9285746  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| |||||||||||    
T  9285747 agttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 34244969 - 34245048
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 34245048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 15299510 - 15299578
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattccc-catccaaacac 15299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 392
Target Start/End: Complemental strand, 776239 - 776100
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||  |  ||| |||||||| ||||||||||||||||| ||||||| || ||| ||||| |||| |    | ||||| | || |||||    
T  776239 agagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaaggtgaattctattgtttgaatttaacttaaagt 776140  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    | |||||||  |||||||||||||||||||||||||||||    
T  776139 agttgaatttcctcaaaacattacattccctcaaaacatt 776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 13487359 - 13487280
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||| |||| ||||||    
T  13487359 caaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacac 13487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 28918249 - 28918170
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||||||| |||||||  || ||||||||||||||||||||||||||||  |||||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacac 28918170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 29889423 - 29889502
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| ||| |||||||| |||||||| |||||||| |||||||||||||||||| ||||||||||||  |||||||||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacac 29889502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 1368561 - 1368482
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||  | |||||||| || |||| ||||||||| |||||||||||||  |||||||||||    
T  1368561 caaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacac 1368482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 15832550 - 15832471
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||| ||||||| |||||||| || ||||||||||||||| || ||||||| ||||||||||||||    
T  15832550 caaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacac 15832471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 6358237 - 6358319
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| |||||||||||||||| ||||||| || ||||| |||||||||||||||| ||||||||||  | |||||| ||||||    
T  6358237 attctaacaatagaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaacacgctctcatctaaacac 6358319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 15299471 - 15299417
Alignment:
Q  340 ttcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcc 15299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 34245053 - 34244987
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 34244987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 8574759 - 8574700
Alignment:
Q  348 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 8574760 - 8574819
Alignment:
Q  348 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 29889507 - 29889432
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  ||||| |||||| | ||||||||||||||||||||||||| || ||||| ||| ||||    
T  29889507 agagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 29889432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 13487275 - 13487345
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||||| |||| |||||| |||||||| |||||| |||| ||||||||||||| || |||||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgaggtg 13487345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 15299579 - 15299514
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| || |||||||||    
T  15299579 tgtgtttggatg-gggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtg 15299514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 28918165 - 28918235
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||| ||| ||||||| || |||||||||    
T  28918165 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtg 28918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 8574695 - 8574752
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||    
T  8574695 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaa 8574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 8574824 - 8574767
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||    
T  8574824 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaa 8574767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 34364827 - 34364770
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    |||||||| ||||||||||||||||| || ||||| |||| |||||||||||||||||    
T  34364827 caaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 1368477 - 1368552
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  ||||| |||||||  |||||||| |||| ||||||||||| | |||||||||| ||||    
T  1368477 agagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtgaattc 1368552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 9697546 - 9697489
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    |||||||| |||||||| |||||||| ||||||||  ||||||||| |||||||||||    
T  9697546 caaacaatggaattcacatcaaagtatttgaattccttcaaaacatcacattccctca 9697489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 407
Target Start/End: Complemental strand, 33733472 - 33733437
Alignment:
Q  372 attacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||| |||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacac 33733437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 15832470 - 15832536
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||||||||| ||| ||| || | ||||||||||||| ||||||||||| || |||| ||||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattcaaatactttggggtg 15832536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 1195416 - 1195371
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||| ||||||||||||||||| ||||| || |||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 15299417 - 15299469
Alignment:
Q  271 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||| |||||||  |||||||||||||||| |||||||| || |||||||||    
T  15299417 ggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtg 15299469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaat 293  Q
    |||||||||||||||| |||||| |||||||| ||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 4e-58; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 5644836 - 5644682
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagt 5644737  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||  ||| |||||||    
T  5644736 agttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacac 5644682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 29065978 - 29065824
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29065978 agagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 29065879  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||||||||   |||||||||||    
T  29065878 agttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacac 29065824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 253 - 406
Target Start/End: Original strand, 21635885 - 21636038
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21635885 agagtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaagt 21635984  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    | || |||||  |||||||||||||||||||||||||||| || ||||||||||    
T  21635985 agttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 40110897 - 40110742
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaag 351  Q
    |||||||||||||||| || ||| ||| |||| ||||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| ||||    
T  40110897 agagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaag 40110798  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    || |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  40110797 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 40110742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 2057395 - 2057549
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| || |||||||||  ||||||||||| |||||||||  ||||    
T  2057395 agagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagt 2057494  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  2057495 agttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 2057549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 382
Target Start/End: Complemental strand, 46069545 - 46069421
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| |||||||||| |||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  46069545 agtgtgtttggatgggggaatattt-gaggtaatgtaatgtt--gagggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtag 46069449  T
Q  355 ttgaattcgctcaaaacattacattccc 382  Q
    |||||||| |||||||||||||||||||    
T  46069448 ttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 43955671 - 43955522
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| ||   ||||||||| || ||||||     
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgcattctaa---tagaattcatcttaaagtag 43955575  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  43955574 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 43955522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 43955517 - 43955668
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| || || |||| |    |||||| ||||| |||||    
T  43955517 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaagatgaattctat---tagaatgcaccttaaagt 43955613  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  43955614 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 43955668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 34388424 - 34388270
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||| |||| ||||| |||||||| |||||||| |||||||||||||||| || |||||||||  |||||||||| |||||||||| |||||    
T  34388424 agagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagt 34388325  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||| |||||||| || |||||||| ||| || |||||||||||    
T  34388324 agttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacac 34388270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 49052786 - 49052936
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||||  ||| |||||||| |||||||||||||||| |||||||| || |||||| || |||||||||||||||||||||| |||||    
T  49052786 agagtgtgtttggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaagt 49052884  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||| |||| |||||||||| |||||||||||    
T  49052885 agttgaattccctcaaaacattacatt-cctc-aaacattccc-catccaaacac 49052936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 44915195 - 44915324
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||||| |||| |||||||| || |||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||| | |||    
T  44915195 agagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagt 44915294  T
Q  353 aattgaattcgctcaaaacattacattccc 382  Q
    | |||||||| |||||||||||| ||||||    
T  44915295 agttgaattccctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 40110737 - 40110892
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaata-gaattcacctcaaag 351  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    |  |||||||||||||||    
T  40110737 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaag 40110836  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    || |||||||| ||||||||||||||||||||| ||||||| || |||||||||||    
T  40110837 tagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacac 40110892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 2057554 - 2057400
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| || ||  ||||| |||  |    | ||| ||||||||||||    
T  2057554 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagt 2057455  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  2057454 agttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacac 2057400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 5644677 - 5644831
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||| |||  ||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||  ||||||||| |    
T  5644677 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctcaaaat 5644776  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||||||||||| ||||||||| ||||| |||||||||||    
T  5644777 aattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacac 5644831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 29065819 - 29065973
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||||| |    
T  29065819 agagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 29065918  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||| |||||||||||||||| ||| ||||||||||  |||||||||||    
T  29065919 aattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacac 29065973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 34388265 - 34388419
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| || |||||||||||| || |||||||| |||| |||||||| || ||| ||||| |||| |    | ||| ||||||||||||    
T  34388265 agagtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattcaactactttaaggtgaattccattgtttgaactcacctcaaagt 34388364  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  34388365 agttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacac 34388419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 31632809 - 31632727
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  31632809 attcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31632727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 40854129 - 40854007
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgaggg-aattcaattattttgaggtggattcaaacaatagaattcacctcaaag 351  Q
    |||||||||||||||| || ||| || ||||| |||||||| ||||||||| ||||||| || |||||| || |||||||||||||||||||||| ||||    
T  40854129 agagtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttgagttgaattcaaacaatagaattcaccttaaag 40854030  T
Q  352 taattgaattcgctcaaaacatt 374  Q
    || |||||||| |||||||||||    
T  40854029 tagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 23455222 - 23455301
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  23455222 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacac 23455301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 26162112 - 26162191
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 26162191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 35776930 - 35777009
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| ||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacac 35777009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 28539143 - 28539222
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  28539143 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacac 28539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 257 - 407
Target Start/End: Complemental strand, 49052937 - 49052791
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaatt 356  Q
    |||||||||||| |||||| ||| |||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| ||    
T  49052937 tgtgtttggatg-gggaatgttt-gagg-aatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagtt 49052841  T
Q  357 gaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||    
T  49052840 gaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacac 49052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 6498740 - 6498819
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| | |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 6498819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 35777014 - 35776939
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  35777014 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 35776939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 39342617 - 39342696
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  39342617 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 39342696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 290 - 407
Target Start/End: Complemental strand, 44915317 - 44915200
Alignment:
Q  290 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaac 389  Q
    ||||||||||||||||||||| || | | ||||| |||| |    | ||||||||||||||||| ||||||||  |||||||||||| |||||||||||     
T  44915317 taatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaa 44915218  T
Q  390 attccctcatccaaacac 407  Q
    |||| |||||||||||||    
T  44915217 attctctcatccaaacac 44915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 259 - 403
Target Start/End: Complemental strand, 21636038 - 21635894
Alignment:
Q  259 tgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattga 358  Q
    |||||||||| || ||| |||||||| ||||||||||||||| |||||| || || |||||| || |||| |    | |||| ||||||||| |||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagatgaattctattgtttgaatccacctcaaaataattga 21635939  T
Q  359 attcgctcaaaacattacattccctcaaaacattccctcatccaa 403  Q
    || | |||||||||||||||| |||||||| |||| | |||||||    
T  21635938 atcccctcaaaacattacattacctcaaaatattctcccatccaa 21635894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 9784906 - 9784985
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| || |||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||  |||||||||||    
T  9784906 caaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacac 9784985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 14603237 - 14603316
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||| ||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  14603237 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 14603316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 23548586 - 23548665
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||  ||||||||| |||||||||||||||||||||  |||||||||||    
T  23548586 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacac 23548665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 25189201 - 25189280
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  ||||||| |||||||| |||||||| ||||||||||| |||| ||||||||||||||| |||||||||||    
T  25189201 caaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacac 25189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 26162196 - 26162121
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 26162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 31632722 - 31632797
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || ||||||||| ||||    
T  31632722 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 31632797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 35455888 - 35455809
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||| ||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  35455888 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 35455809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 43791174 - 43791094
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactct 410  Q
    |||||||| || |||||||||||||| |||||||| |||||||||||||||||||||  ||| || |||||||||||||||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctc--aacttttcctcatccaaacactct 43791094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 34398938 - 34399003
Alignment:
Q  343 acctcaaagtaattgaattcgc-tcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacac 34399003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 22391562 - 22391641
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  ||||||||||||| || || ||||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  22391562 caaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaacattatctcattcaaacac 22391641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 23455302 - 23455231
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 23455231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 28539227 - 28539152
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 28539152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 29639190 - 29639269
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||| || |||||||  |||| ||||||||||||||| ||||||||||| |||||| ||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacac 29639269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 30629141 - 30629062
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||| ||||||| || ||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  30629141 caaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacac 30629062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 6498824 - 6498758
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 6498758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 25189285 - 25189219
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 319  Q
    |||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||| || |||||    
T  25189285 agagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttga 25189219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 34399008 - 34398938
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg-gaattcaattattttgaggt 322  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttgaggt 34398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 40854007 - 40854124
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgc-tcaaaacattacattccctcaaaac 389  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||||| |||||||| | |||||| |||||||||||||| |||    
T  40854007 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaac 40854106  T
Q  390 attccctcatccaaacac 407  Q
    ||| || |||||||||||    
T  40854107 atttccccatccaaacac 40854124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 18789221 - 18789300
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||| |||||| |||||||| |||| ||||||| |||| ||||||| |||||  |||||||||||    
T  18789221 caaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacac 18789300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 29639274 - 29639199
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||| |||||| |||||| |||| ||| ||||||||||| ||||| ||||||| |||||||||||| ||||    
T  29639274 agagtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaattc 29639199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 39342701 - 39342626
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  39342701 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 39342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 46069424 - 46069542
Alignment:
Q  286 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| || |||||| ||||||||||| |||  ||||||||||| ||||     
T  46069424 aatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccatctcaaaataattgaattccctc--aacattacattacctc- 46069520  T
Q  386 aaacattccctcatccaaacac 407  Q
    ||| |||||| |||||||||||    
T  46069521 aaatattcccccatccaaacac 46069542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 3905634 - 3905699
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 393  Q
    |||||||||||||||||||||||||| ||||||||  | |||||||||  || |||||||||||||    
T  3905634 caaacaatagaattcacctcaaagtatttgaattccttgaaaacattatttttcctcaaaacattc 3905699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 9784989 - 9784920
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||  ||||| |||||||| |||||| |||||||||||||||||| || |||| ||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtg 9784920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 14603321 - 14603264
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  14603321 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 14603264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 35455804 - 35455861
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 35455861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 22391644 - 22391576
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||| |||||  ||| |||||||| |||||||||||||||| ||||| || ||||||||||||    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatttaaatattttgaggtg 22391576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 30524339 - 30524275
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    ||||||||  |||||| | ||||||| |||||||| |||||||||||||||||| ||||||||||    
T  30524339 caaacaatgaaattcatcccaaagtatttgaattccctcaaaacattacattccttcaaaacatt 30524275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 18789305 - 18789230
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  |||||||||||||  ||| ||||||| ||||||||||||| || ||| ||||| ||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatactttaaggtgaattc 18789230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 23548670 - 23548595
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  ||||| |||||||| |||||| |||||||||| ||||||| || |||| |||| ||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtgaattc 23548595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 29195709 - 29195756
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 300  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  29195709 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 46482104 - 46481978
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||| |||  | ||| | |||| | ||||||||||||||||  ||||||| ||||| ||| || ||||||||||||||||||| ||  || |    
T  46482104 agagtgtgtttgaatggagaaatgtgttgaaggaatgtaatgttttgagaaaattcaactattt-gagttgaattcaaacaatagaattcatcttcaaat 46482006  T
Q  353 aattgaattcgctcaaaacattacattc 380  Q
    | || ||||  |||||||||||||||||    
T  46482005 agttaaatttcctcaaaacattacattc 46481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 18789600 - 18789544
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    ||||||| ||||||||||||||||| |||||||| |||  |||||||||||| ||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 355 - 403
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaa 403  Q
    |||||||| |||||||||||||||| || |||||||||||| |||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 43791116 - 43791160
Alignment:
Q  279 ttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||| ||||||||||||||||||||||||| || |||||||||    
T  43791116 ttgagggaatgtaatgttttgagggaattcaaatactttgaggtg 43791160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 14790197 - 14790151
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||| |||| |||||||||||||||| |||||||| |||||||||||    
T  14790197 caaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 45984424 - 45984378
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  45984424 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 45988784 - 45988738
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  45988784 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 18926861 - 18926812
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgaggga 304  Q
    ||||||||| |||| ||| | ||||||||| |||||||||||||||||||    
T  18926861 agtgtgttttgatggggggacattttgaggtaatgtaatgttttgaggga 18926812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 19865597 - 19865564
Alignment:
Q  251 tgagagtgtgtttggatgagggaatattttgagg 284  Q
    ||||||||||||||||||||||||| ||||||||    
T  19865597 tgagagtgtgtttggatgagggaatgttttgagg 19865564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 30524255 - 30524312
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||||| ||||||  | ||| |||||| | |||||||||||||||||||||||||    
T  30524255 agagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaa 30524312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 22351922 - 22351874
Alignment:
Q  262 ttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||| |||||| ||||| || |||||||||||||||| ||||||||    
T  22351922 ttggatgggggaatgttttggggtaatgtaatgttttgagagaattcaa 22351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 29639119 - 29639167
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 386  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  29639119 aatttacctcaaagtatttgaattctctcataacattacatttcctcaa 29639167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 31632876 - 31632828
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 386  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  31632876 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 31632828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 7e-57; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 272 - 404
Target Start/End: Complemental strand, 31070546 - 31070415
Alignment:
Q  272 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaac 371  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaac 31070447  T
Q  372 attacattccctcaaaacattccctcatccaaa 404  Q
    |||||||||||||||||||||||| ||||||||    
T  31070446 attacattccctcaaaacattccc-catccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 44692981 - 44692827
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||    
T  44692981 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 44692882  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
      |||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  44692881 ggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacac 44692827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 46429555 - 46429434
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46429555 agagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagt 46429456  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| |||||||||||    
T  46429455 agttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 9129503 - 9129349
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||||    
T  9129503 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagt 9129404  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | ||||||||  |||||||||||||||||||||||| | || | |||||||||||    
T  9129403 agttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacac 9129349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 9137610 - 9137456
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||||    
T  9137610 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagt 9137511  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | ||||||||  |||||||||||||||||||||||| | || | |||||||||||    
T  9137510 agttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacac 9137456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 253 - 370
Target Start/End: Complemental strand, 47284385 - 47284268
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggttgattcaaacaatagaattcacctcaaagt 47284286  T
Q  353 aattgaattcgctcaaaa 370  Q
    |  ||||||| |||||||    
T  47284285 agctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 5415783 - 5415937
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| || ||| |||||  | ||||||||||||||||||| |||||    
T  5415783 agagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagt 5415882  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | ||||||||  |||||||||||| ||||||||||| |||||| |||||||||||    
T  5415883 agttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacac 5415937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 44436384 - 44436263
Alignment:
Q  286 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||    
T  44436384 aatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctca 44436285  T
Q  386 aaacattccctcatccaaacac 407  Q
    |||||||||| |||||||||||    
T  44436284 aaacattcccccatccaaacac 44436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 39215995 - 39215888
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttgaggtggattcaaacaataaaattcacctcaaagtaa 39215896  T
Q  355 ttgaattc 362  Q
    ||||||||    
T  39215895 ttgaattc 39215888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 9129344 - 9129498
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| | || |||||||||| ||||||||||||||| ||||||||| || ||| || || |||| |    | ||||||||||||||||    
T  9129344 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagt 9129443  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9129444 agttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 9129498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 9137451 - 9137605
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| | || |||||||||| ||||||||||||||| ||||||||| || ||| || || |||| |    | ||||||||||||||||    
T  9137451 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagt 9137550  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9137551 agttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 9137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 255 - 382
Target Start/End: Original strand, 42130694 - 42130821
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    ||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||| || | ||||||||||| | ||||||||||||||||||||    
T  42130694 agtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaaagtaa 42130793  T
Q  355 ttgaattcgctcaaaacattacattccc 382  Q
    |||||||| || |||| |||||||||||    
T  42130794 ttgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 44692822 - 44692976
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||  | ||| ||||| |||| |    | ||||||||||||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagt 44692921  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  44692922 agttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 44692976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 28092214 - 28092335
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||| |||||||||| |||||| |||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||      
T  28092214 agagtatgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaac 28092313  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| |||||||||||    
T  28092314 agttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 27252053 - 27251932
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||||    
T  27252053 agagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagt 27251954  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| || ||||||||    
T  27251953 agttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 5415942 - 5415788
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||| || ||| ||||| |||| |    | | | |||||| |||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagt 5415843  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||| ||||||  ||||||||||    
T  5415842 agttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacac 5415788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 379
Target Start/End: Original strand, 44436258 - 44436384
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| |||||| ||||| |||| |    | ||||||||||||||||    
T  44436258 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaagt 44436357  T
Q  353 aattgaattcgctcaaaacattacatt 379  Q
    | |||||||| ||||||||||||||||    
T  44436358 agttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 291 - 406
Target Start/End: Complemental strand, 28092335 - 28092220
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| | |||||||||| |||| |    | |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  28092335 aatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaaca 28092236  T
Q  391 ttccctcatccaaaca 406  Q
    ||||| ||||||||||    
T  28092235 ttcccccatccaaaca 28092220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 261 - 393
Target Start/End: Original strand, 31070415 - 31070546
Alignment:
Q  261 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaat 360  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||||| |||||||||    
T  31070415 tttggatg-gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaat 31070513  T
Q  361 tcgctcaaaacattacattccctcaaaacattc 393  Q
    || |||||||||||||||| |||||||| ||||    
T  31070514 tccctcaaaacattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 21307520 - 21307599
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacac 21307599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 46672799 - 46672870
Alignment:
Q  336 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 46672870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 49457423 - 49457348
Alignment:
Q  332 caatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49457348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 53129831 - 53129910
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacac 53129910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 27251978 - 27252048
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacac 27252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 253 - 362
Target Start/End: Complemental strand, 46672875 - 46672772
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||      | ||||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc------ttgaattcacctcaaagt 46672782  T
Q  353 aattgaattc 362  Q
    | ||||||||    
T  46672781 agttgaattc 46672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 36397979 - 36398056
Alignment:
Q  330 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  36397979 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacac 36398056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 332012 - 332096
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| |||||| |||||||| |||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 46429434 - 46429550
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | |||| ||||||||| |||||||||||  ||||||||||||||| |||||||| |    
T  46429434 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaata 46429533  T
Q  391 ttccctcatccaaacac 407  Q
    |||||||||||||||||    
T  46429534 ttccctcatccaaacac 46429550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 7302430 - 7302351
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||| |||  |||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  7302430 caaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacac 7302351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 39110394 - 39110485
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcac 344  Q
    ||||||||||||||||| | ||| |||||||  |||||||||||||| |||||||||| || |||||| || ||||||||||||||||||||    
T  39110394 agagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgagttgaattcaaacaatagaattcac 39110485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 47767516 - 47767437
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  47767516 caaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 47767437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 19475900 - 19475824
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    |||||||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||  ||||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 31189385 - 31189464
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| ||| |||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||| |||||||    
T  31189385 caaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacac 31189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 37054478 - 37054399
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||    
T  37054478 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacac 37054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 42005941 - 42006020
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||| ||| || |||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  42005941 caaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 42006020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 48947689 - 48947610
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||   |||||||||||    
T  48947689 caaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacac 48947610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 53470417 - 53470496
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||| ||||||| |||||||| ||||||||| || |||||||||||||||| ||||||||||||||    
T  53470417 caaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacac 53470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 30766637 - 30766571
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    |||||||| ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 34088653 - 34088576
Alignment:
Q  330 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||| |  |||||||||||    
T  34088653 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacac 34088576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 49457343 - 49457400
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  49457343 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 49457400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 671607 - 671683
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    |||||||| ||||||||| |||||||  ||||||| ||||||||| ||||||||||||||||||||||  |||||||    
T  671607 caaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaa 671683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 328 - 400
Target Start/End: Complemental strand, 7976632 - 7976560
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatc 400  Q
    |||||||||||||||||||||| ||| || |||||  ||||||||||||||||| ||||||||||| ||||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattctctcatc 7976560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 47284316 - 47284380
Alignment:
Q  343 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||    
T  47284316 acctcaaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacac 47284380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 21307600 - 21307529
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||| |||||| ||||| || ||||||||||||||||||||||||| || ||||||||| ||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 21307529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 25655335 - 25655418
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||||||||||| || |||||| || ||||||| ||||||||||| || |||||| ||||||||  ||||||||||    
T  25655335 aatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 36398061 - 36397986
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 36397986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 53129915 - 53129840
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||| || |||| |||| ||||    
T  53129915 agagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattc 53129840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 39110469 - 39110399
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| ||||||||| |||||||| | ||||||||||||||| ||||||||||| | ||||||||||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacac 39110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 47767432 - 47767502
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| ||  ||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 47767502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 31189469 - 31189400
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggt 322  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||||||| |||||||| || ||||||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggt 31189400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 35279920 - 35279969
Alignment:
Q  358 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacac 35279969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 7302346 - 7302402
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattca 309  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||| ||||||||    
T  7302346 agagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattca 7302402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 407
Target Start/End: Original strand, 39215880 - 39215992
Alignment:
Q  295 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattcc 394  Q
    |||| |||||||||||||| ||||||||| |||  |    | |||| ||||||||| ||||||||||  |||||||||||| ||| |||||||| ||||     
T  39215880 tttttagggaattcaattactttgaggtgaattttattgtttgaatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattct 39215979  T
Q  395 ctcatccaaacac 407  Q
    |||||||||||||    
T  39215980 ctcatccaaacac 39215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 46001364 - 46001420
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattca 309  Q
    ||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||    
T  46001364 agagtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaattca 46001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 37321550 - 37321625
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||| |||||||| ||||||||||||||| || |||||||||||||| ||||||| || ||| ||||| ||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattcaactactttaaggtgaattc 37321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 52527120 - 52527041
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||| ||||||||||| ||||||||   || |||||||||| || ||||||||||||| |||||||||||    
T  52527120 caaacaatggaatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacac 52527041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 37054394 - 37054464
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| |||| ||| ||||||||||||||| ||||||||| ||  ||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtg 37054464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 42006025 - 42005971
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 307  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||    
T  42006025 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatt 42005971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 53470501 - 53470431
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||||||||||||| ||| |||||||| ||| || |||||||||||||||||| || |||| ||||    
T  53470501 agagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtg 53470431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 42130818 - 42130697
Alignment:
Q  286 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    |||||||| |||| |||||||||||||| ||||||||| |||| |    | |||| ||| | ||  ||||||||||| |||||||||||||||  |||||    
T  42130818 aatgtaatctttttagggaattcaattactttgaggtgaattctactctttgaatccacttaaagataattgaattccctcaaaacattacatcacctca 42130719  T
Q  386 aaacattccctcatccaaacac 407  Q
    ||| |||||| || ||||||||    
T  42130718 aaatattcccccacccaaacac 42130697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 34088571 - 34088646
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||  | ||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  34088571 agagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 34088646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 337 - 404
Target Start/End: Complemental strand, 37321625 - 37321558
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    |||||||||| |||||| |||||||  ||||||||||||| || |||||||| |||||| ||||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaa 37321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 35279970 - 35279920
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 307  Q
    |||||||||||| |||||| |||||||| |||||||||||||||| |||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagtgaatt 35279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 38506861 - 38506910
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||    
T  38506861 attcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 46635857 - 46635914
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||||||||||||||  ||| |||||||  ||||||||||||||||| |||||||    
T  46635857 agagtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattcaa 46635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 671691 - 671635
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattca 309  Q
    ||||||| |||||||  |||||| |||||||| |||||| |||||||||||||||||    
T  671691 agagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattca 671635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 407
Target Start/End: Complemental strand, 40929704 - 40929613
Alignment:
Q  315 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||| |||||||||||||||||||  | ||| || |||||||  |||  ||||||| |||| || ||||||||||| |||||||||||    
T  40929704 tttgaggtgaattcaaacaatagaattcatattaaaatagttgaattttctccgaacattatattctctgaaaacattccc-catccaaacac 40929613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 46635926 - 46635862
Alignment:
Q  343 acctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| |||||| |||||||  ||||||||||||||||  |||||||||||  |||||||||||||    
T  46635926 acctaaaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacac 46635862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 8762210 - 8762159
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacatt 379  Q
    |||||||| |||||||| |||||||| |||||||| |||| |||||||||||    
T  8762210 caaacaatggaattcacatcaaagtatttgaattccctcataacattacatt 8762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 19475824 - 19475891
Alignment:
Q  261 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||  ||||| |||||||| ||||||||||| ||||| ||||||| || ||||||||| ||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattc 19475891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 21730902 - 21730965
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 316  Q
    ||||||||||||||||||||||| |  | |||  |||||||||||||| ||||||||| |||||    
T  21730902 agagtgtgtttggatgagggaatgtcctaaggttatgtaatgttttgaaggaattcaaatattt 21730965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 46706736 - 46706674
Alignment:
Q  328 caaacaatagaattcacctcaaagtaatt--gaattcgctcaaaacattacattccctcaaaa 388  Q
    |||||||| ||||||||||||||||| ||  |||||| ||| |||||||||||||| ||||||    
T  46706736 caaacaatggaattcacctcaaagtatttaagaattctctcgaaacattacattccttcaaaa 46706674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 284
Target Start/End: Complemental strand, 47284257 - 47284226
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgagg 284  Q
    ||||||||||||||||||||||||||||||||    
T  47284257 agagtgtgtttggatgagggaatattttgagg 47284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 48947605 - 48947680
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||||   |||| |||||||| |||||| ||||||||| |||||||| || |||| |||| ||||    
T  48947605 agagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtgaattc 48947680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 50168598 - 50168665
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    |||||||| ||||||| || ||| || |||| ||  |||||||||||||||| |||||||||||||||    
T  50168598 caaacaatggaattcagctaaaattatttgagtttcctcaaaacattacattacctcaaaacattccc 50168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 2104818 - 2104772
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||||    
T  2104818 caaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 13176550 - 13176600
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 378  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  13176550 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 13176600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 13339451 - 13339501
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 378  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  13339451 caaacaatagaatccacctaaaagtctttgaattctctcaaaacattacat 13339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 21730988 - 21730907
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||  |||||| |||||| || ||||||||  ||||||||||||||  ||| |  ||||||||||||||||||||    
T  21730988 attcaaacaatgaaattcatctcaaa-tatttgaattccttcaaaacattacataaccttaggacattccctcatccaaacac 21730907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 44288467 - 44288525
Alignment:
Q  348 aaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    |||||| ||||||||  ||||||||||| ||| ||||||||||||||  ||||||||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 332049 - 332012
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  332049 gaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 1147013 - 1146960
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||| ||||||||||||||||||  |||||||| |||||||  |||||||    
T  1147013 tgtgtttgaatgagggaatattttgagctaatgtaattttttgagaaaattcaa 1146960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 328
Target Start/End: Original strand, 30766571 - 30766628
Alignment:
Q  271 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||| |||||||| ||||||||||||||| ||||||||| ||  |||||||| ||||    
T  30766571 ggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 30766628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 30767189 - 30767112
Alignment:
Q  328 caaacaatagaattcacctca-aagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    |||||||| ||||||||||   ||||| ||||||||  ||| ||||||| |||||||||||||||| || ||||||||    
T  30767189 caaacaatggaattcaccttttaagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaa 30767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 19475971 - 19475923
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaa 386  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||    
T  19475971 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 19475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 34396578 - 34396510
Alignment:
Q  255 agtgtgtttggatgagggaata-ttttgaggcaatgtaatgttttgagggaattcaattattttgaggt 322  Q
    ||||||||||||||||| |||| |||||||| |||||||| ||   ||||||||||| || ||||||||    
T  34396578 agtgtgtttggatgaggcaatatttttgagggaatgtaatattacaagggaattcaaatactttgaggt 34396510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 107; Significance: 3e-53; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 4093 - 4286
Alignment:
Q  17 agaaactcatgcaaaggccaagaatgtatactgaaattttctcaatgtcatctttcaagtcctcagaaaggccaagaatgcataccttttggattgtgat 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4093 agaaactcatgcaaaggccaagaatgcatactgaaattttctcaatgtgatctttcaagtcctgagaaaggccaagaatgcataccttttgggttgtgat 4192  T
Q  117 agtgatatcatttgtatcagatagccatggtgagggaggagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgag---atttat 213  Q
    |                      |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  4193 a----------------------gccatggtgagggaagagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgagggaatttat 4270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 440
Target Start/End: Original strand, 4312 - 4342
Alignment:
Q  410 tgagggatttttgagggaatttataccttta 440  Q
    |||||||||||||||||||||||||||||||    
T  4312 tgagggatttttgagggaatttataccttta 4342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 6e-51; HSPs: 92)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 15373960 - 15374114
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | |||    
T  15373960 agagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagt 15374059  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  15374060 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 15374114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 9764497 - 9764343
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagt 9764398  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  9764397 agttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 9764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 20523133 - 20523287
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| | |||| |||||||| |||||||| || ||||||||||||| || ||||||||| |||||||||||||||||||||| |||||    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 20523232  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  20523233 agttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacac 20523287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 32390131 - 32389977
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||||||| || |||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| | |||    
T  32390131 agagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagt 32390032  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  32390031 agttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacac 32389977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 2316537 - 2316383
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacc-tcaaag 351  Q
    |||||||||||||||| |  ||| |||||||| |||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||| | ||||    
T  2316537 agagtgtgtttggatg-gaaaatgttttgagggaatgtaatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaag 2316439  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    || |||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  2316438 tagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacac 2316383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 6634015 - 6634168
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  6634015 agagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaattatttcga-gtgaattcaaacaatagaattcacctcaaagt 6634113  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | ||||| ||  | |||| ||||||||||||| |||  ||||| |||||||||||    
T  6634114 agttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacac 6634168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 9764338 - 9764492
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||||    
T  9764338 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagt 9764437  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  9764438 agttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacac 9764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 40809341 - 40809495
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| || ||| |||||||  ||| ||||||||||||||||||||| || |||||| || |||||||||||| ||||||||| |||||    
T  40809341 agagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagt 40809440  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |  ||||||| ||||||||||||||||| ||||||||||| || |||| ||||||    
T  40809441 agctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacac 40809495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 32389974 - 32390126
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    ||||||||||||||||||||| |||||| | |||||||| |||||||||||||||| || | | ||||| |||| |  | | |||||||||||||||||     
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtag 32390073  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||||||||||| |||| || ||||||||||    
T  32390074 ttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacac 32390126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 28828504 - 28828417
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 342  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 28828417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 15374119 - 15373965
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || | | ||||| |||| |    | ||||||||||||||||    
T  15374119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagt 15374020  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| ||||||||||||||||||||||||| ||||   |||||||||||    
T  15374019 agttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacac 15373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 254 - 407
Target Start/End: Complemental strand, 20523291 - 20523138
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagta 353  Q
    ||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| || ||| ||||| |||| |    | |||||||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagta 20523192  T
Q  354 attgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
     |||||||| |||| || |||||||||||||||||||||| | |||||||||||    
T  20523191 gttgaattccctcagaatattacattccctcaaaacattctcccatccaaacac 20523138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 40643856 - 40643971
Alignment:
Q  291 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaaca 390  Q
    |||||||||||||||||||| || |||||| |  |||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||||||    
T  40643856 aatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctcaaaaca 40643954  T
Q  391 ttccctcatccaaacac 407  Q
    ||||| |||||||||||    
T  40643955 ttcccccatccaaacac 40643971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 392
Target Start/End: Original strand, 2316378 - 2316518
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga-ggtggattcaaacaatagaattcacctcaaag 351  Q
    |||||||||||||||| |||||| |||||||| |||||||| |||||||||||||||| || ||| | |||| |||| |    | |||||||||||||||    
T  2316378 agagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaaag 2316477  T
Q  352 taattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    || |||||||| |||||||||||||||||||||||||||||    
T  2316478 tagttgaattctctcaaaacattacattccctcaaaacatt 2316518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 392
Target Start/End: Complemental strand, 32471039 - 32470902
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| || ||| ||  |||| ||||||||||||||||||||||||| || |||||| || ||||||| ||||||||| |||| ||| |    
T  32471039 agagtgtgtttggatgtggaaatctt--gagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaat 32470942  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacatt 392  Q
    | ||||||||  ||||||||||||||||||||||||||||    
T  32470941 agttgaattccttcaaaacattacattccctcaaaacatt 32470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 395
Target Start/End: Complemental strand, 23092121 - 23091979
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| ||||||   ||||||||||||||||||| ||||| || ||| || || ||||| | ||||||||||| || |||||    
T  23092121 agagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaagt 23092022  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccc 395  Q
    | ||||||||  |||||||||||||||||||||||| ||||||    
T  23092021 agttgaattccttcaaaacattacattccctcaaaatattccc 23091979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 22767036 - 22766957
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacac 22766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 37722880 - 37722959
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacac 37722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 3563364 - 3563282
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  3563364 attcaagcaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacac 3563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 253 - 386
Target Start/End: Original strand, 32470882 - 32471015
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||| ||||||||  | ||| |||||||| ||||||||||||||| ||||||||| |||||| ||||  |||| |  | | ||||||| ||||||||    
T  32470882 agagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaaagt 32470981  T
Q  353 aattgaattcgctcaaaacattacattccctcaa 386  Q
    | |||||||| |||||||||||||||||||||||    
T  32470982 agttgaattccctcaaaacattacattccctcaa 32471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 2721557 - 2721625
Alignment:
Q  339 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 2721625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 25935276 - 25935355
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||| |||||||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacac 25935355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 37722964 - 37722889
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 37722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 40090400 - 40090479
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| |||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacac 40090479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 23091963 - 23092116
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||||| ||||||||| || ||| || || |||| |      ||||||| || |||||    
T  23091963 agagtgtgttttgatg-gggaatattttgagggaatgtaatgttttgaaggaattcaactactttaagttgaattctattttctgaattcatctgaaagt 23092061  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | ||||| || |||||||||||||||||  ||||||||||||| |||||||||||    
T  23092062 agttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacac 23092116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 16515099 - 16515172
Alignment:
Q  334 atagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacac 16515172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 37145487 - 37145564
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaac 405  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  37145487 caaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 26281262 - 26281334
Alignment:
Q  335 tagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacac 26281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 927386 - 927307
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||| || |||||||||||    
T  927386 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacac 927307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 9894308 - 9894387
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||||||| |||||||| ||   ||||||||||||||||||||||||||| |||||||||||    
T  9894308 caaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacac 9894387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 19533893 - 19533972
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||  |||||||||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacac 19533972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 22303856 - 22303935
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  22303856 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacac 22303935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 41762201 - 41762280
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| ||||||| |||||||| || |||||| |||||||||||||||||||||| |||||||||||    
T  41762201 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacac 41762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 15804397 - 15804327
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  15804397 gaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacac 15804327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 40809500 - 40809346
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    ||||||||||| |||| || ||| |||||||  |||||||||||||||| |||||||  || ||| ||||| |||  |    | ||||||| ||||||||    
T  40809500 agagtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattcagctactttaaggtgaattttattgtttgaattcaactcaaagt 40809401  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||| |||| ||||||||||| || |||||||||||    
T  40809400 agttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacac 40809346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 40643976 - 40643856
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| |||| |    | ||||| | ||||||||    
T  40643976 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctattgtttgaatttaactcaaagt 40643878  T
Q  353 aattgaattcgctcaaaacatt 374  Q
    | |||||||| |||||||||||    
T  40643877 agttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 2721628 - 2721560
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 2721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 15804320 - 15804400
Alignment:
Q  251 tgagagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaa 331  Q
    |||||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||| || |||||| || |||||||    
T  15804320 tgagagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgagttgaattcaaa 15804400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 256 - 407
Target Start/End: Complemental strand, 6634170 - 6634020
Alignment:
Q  256 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaat 355  Q
    ||||||||||||| ||||| |||| |||| |||||||| |||| | ||| ||||| || ||||||||| |||| |    | |||||||| || || ||||    
T  6634170 gtgtgtttggatgggggaacatttcgagggaatgtaatattttaaaggagttcaactactttgaggtgaattctattgtttgaattcac-tcgaaataat 6634072  T
Q  356 tgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| |||||||||||||||| |||||||| || ||| |||||||||||    
T  6634071 tgaattccctcaaaacattacattacctcaaaatatccccccatccaaacac 6634020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 32250084 - 32250162
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||| ||||| ||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  32250084 caaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacattccc-catccaaacac 32250162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 40090484 - 40090409
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| || ||||||||| ||||    
T  40090484 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattc 40090409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 16515009 - 16515097
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacct 346  Q
    |||||||||||| | |||| |||||||| ||||||| ||||||||||||||||| |  ||||||||| |||| |||||||||||||||||    
T  16515009 tgtgtttggatg-gagaatgttttgagggaatgtaaggttttgagggaattcaacttctttgaggtgaattctaacaatagaattcacct 16515097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 16515177 - 16515010
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaa--------------taga 338  Q
    |||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||| |  ||||||||| |||| |  |               ||||    
T  16515177 agagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaacttctttgaggtgaattctataaggtgaattctattgttaga 16515078  T
Q  339 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||| | |||||||| |||||||| ||||||||||||||||||||| | |||||||||||    
T  16515077 attcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacattctc-catccaaacac 16515010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 22766952 - 22767027
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||| || ||| ||||| ||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattc 22767027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 25935360 - 25935285
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||| ||||||| || ||||||||| ||||    
T  25935360 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattc 25935285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 26281339 - 26281264
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 26281264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 33245366 - 33245437
Alignment:
Q  336 agaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| || |||||| |||||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacac 33245437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 3563278 - 3563352
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 3563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 22303940 - 22303870
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| ||  ||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 22303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 28828431 - 28828501
Alignment:
Q  337 gaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| |||||||| ||| || |||||||||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 28828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 13243514 - 13243469
Alignment:
Q  357 gaattcgctcaaaacattacattccctcaaaacattccctcatcca 402  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatcca 13243469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 28828369 - 28828422
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 308  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 28828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 19533975 - 19533907
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    ||||||||||||||  ||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 19533907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 927302 - 927377
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| || ||| |||||||| |||||| |||||||||||||||||| || |||| |||| ||||    
T  927302 agagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 927377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 13243561 - 13243514
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 302  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagg 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 14834908 - 14834829
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||  |||||||||||||||| ||| |||| || |||||||||||||||||| |||||||| | ||| |||||||    
T  14834908 caaacaatgaaattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacac 14834829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 20320634 - 20320713
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||  ||||||| |||||||| || |||| |||||||||| |||||||||||  ||||||||||||    
T  20320634 caaacaatggaattcacaccaaagtatttgaattcccttaaaatattacattccttcaaaacattcattcatccaaacac 20320713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 407
Target Start/End: Complemental strand, 28828415 - 28828372
Alignment:
Q  364 ctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  28828415 ctcaaaacattacattccctcaaaacattcccccatccaaacac 28828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 35379423 - 35379349
Alignment:
Q  332 caatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| ||||||| |||||| | |||||||| ||||||||||||||||  |||||||||||||| |||||||||||    
T  35379423 caataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacattccc-catccaaacac 35379349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 41762285 - 41762210
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||| || |||| |||| ||||    
T  41762285 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 41762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 13243457 - 13243514
Alignment:
Q  253 agagtgtgtttg--gatgagggaatattttgaggcaatgtaatgttttgagggaattc 308  Q
    ||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  13243457 agagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 470 - 579
Target Start/End: Original strand, 28101163 - 28101273
Alignment:
Q  470 agttctttgtggcttttagcgttgtt-cagaattgtgaggtgcagcggctgctactcggttgttcttctagcctttgttgcgtttcagttttgcgttgga 568  Q
    |||||| ||||| |||||||| |||| || ||||||||||| | | ||||||| || ||||||||||||||||  ||||| ||||| |||||||  | ||    
T  28101163 agttctatgtggtttttagcgatgtttcaaaattgtgaggtacggaggctgctgcttggttgttcttctagcccatgttgtgtttctgttttgctctaga 28101262  T
Q  569 gtaatctggtt 579  Q
    |||||||||||    
T  28101263 gtaatctggtt 28101273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 15270837 - 15270886
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 15804399 - 15804448
Alignment:
Q  358 aattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacac 15804448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 17542344 - 17542393
Alignment:
Q  325 attcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 32250167 - 32250111
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||    
T  32250167 agagtgtgtttggatg-gggaatgttttgagggaaagtaatgttttgagggaattcaa 32250111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 35379344 - 35379400
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  35379344 agagtgtgtttggatg-gggaatgttttgagataatgtaatgttttgagggaattcaa 35379400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 15804451 - 15804399
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 307  Q
    |||||||||||||| || ||| |||||||| ||||||||||||||||||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 34982288 - 34982221
Alignment:
Q  339 attcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||  |||||||| |||||||||| |||||||||||||||||||||  ||||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacac 34982221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 37145569 - 37145501
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||| ||||||||| |||||| |||||||| ||||||||||| |||| |||||||| || |||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtg 37145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 9894388 - 9894317
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||| |||||| |||||||| |||||||||||   ||||||||||| || ||||||||| ||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgaggtgaattc 9894317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 10314733 - 10314655
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaaca 406  Q
    ||||||||||||||||| ||||| || |||||||| || |||| |||||||| | |||||||||| |  ||||||||||    
T  10314733 caaacaatagaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaaca 10314655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacat 373  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 34982216 - 34982272
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||  |||||| |||||||| ||||| |||||||||||||||||||    
T  34982216 agagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattcaa 34982272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 12991334 - 12991374
Alignment:
Q  364 ctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  12991334 ctcaaaacattactttacctcaaaacattccctcatccaaa 12991374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 33245441 - 33245385
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||||||||||| |||||| |||||| | ||||||||||||||||  |||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaa 33245385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 407
Target Start/End: Original strand, 13243515 - 13243558
Alignment:
Q  364 ctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||| |||||||| |||||| |||||||||||    
T  13243515 ctcaaaacattacattacctcaaaatattcccccatccaaacac 13243558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 8255045 - 8255091
Alignment:
Q  271 ggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 317  Q
    |||||| ||| ||| ||||||||||||||||||||||||| ||||||    
T  8255045 ggaatactttaaggtaatgtaatgttttgagggaattcaaatatttt 8255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 11601040 - 11601109
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||| |||| | |||||||| ||| ||| ||||||||||| ||||||||| || |||||||||    
T  11601040 agagtgtgtttgaatgatg-aatattttaaggtaatataatgttttgaaggaattcaaataatttgaggtg 11601109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 35111310 - 35111256
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccc 382  Q
    |||||||||||| |||| ||||| || ||||||||  ||||||||||||||||||    
T  35111310 caaacaatagaactcacatcaaaatatttgaattccttcaaaacattacattccc 35111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattc 380  Q
    |||||| ||||||||| |||||||| |||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 12991374 - 12991333
Alignment:
Q  261 tttggatgagggaatattttgaggcaatgtaatgttttgagg 302  Q
    ||||||||||||||| |||||||| || ||||||||||||||    
T  12991374 tttggatgagggaatgttttgaggtaaagtaatgttttgagg 12991333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 17492634 - 17492679
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacat 373  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||    
T  17492634 caaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 579
Target Start/End: Original strand, 26640873 - 26640958
Alignment:
Q  495 tcagaattgtgaggtgcagcggctgctactcggttgttcttctagcctttgt-tgcgtttcagttttgcgttggagtaatctggtt 579  Q
    ||||||||||||||  ||| ||||||| || ||||||||||||||||| |||  ||||||  ||||| |  |||||||||||||||    
T  26640873 tcagaattgtgaggcacagaggctgctgcttggttgttcttctagcctgtgtccgcgtttatgtttttctctggagtaatctggtt 26640958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 542
Target Start/End: Original strand, 28103921 - 28103994
Alignment:
Q  470 agttctttgtggcttttagcgttgtt-cagaattgtgaggtgcagcggctgctactcggttgttcttctagcct 542  Q
    |||||| ||||| ||||||| ||||| |||||||||||||||| | ||||| | || |||| ||||||||||||    
T  28103921 agttctatgtggattttagcattgtttcagaattgtgaggtgcggaggctgatgcttggttattcttctagcct 28103994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 28489546 - 28489505
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaa 370  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  28489546 aaacaatggaattcacctcaaagtatttgaattctctcaaaa 28489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||||||| |||||||| |||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 5658821 - 5658781
Alignment:
Q  367 aaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||| |  |||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacac 5658781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 13064957 - 13064997
Alignment:
Q  364 ctcaaaacattacattccctcaaaacattccctcatccaaa 404  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  13064957 ctcaaaacattactttacgtcaaaacattccctcatccaaa 13064997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 14834826 - 14834894
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||| ||| | |||| ||| |||| ||||||||||||| ||||||| ||| || |||||||||    
T  14834826 agtgtgtttgcatgggagaatgtttcgagggaatgtaatgttttaagggaatccaaatactttgaggtg 14834894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 562 - 410
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||   |||||     
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 463  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||  ||||||||||| |||||| |||||||||||    
T  462 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 405 - 559
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||| || ||   |||| |||| |    | ||| ||||||||||||    
T  405 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagt 504  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  505 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 2031 - 2183
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaa 354  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||   |||||     
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 2130  T
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||||  ||||||||||| |||||| |||||||||||    
T  2131 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 2188 - 2034
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 352  Q
    |||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||| || ||   |||| |||| |    | ||| ||||||||||||    
T  2188 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagt 2089  T
Q  353 aattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    | |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  2088 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 86; Significance: 9e-41; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 56307 - 56428
Alignment:
Q  286 aatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctca 385  Q
    ||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  56307 aatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctca 56406  T
Q  386 aaacattccctcatccaaacac 407  Q
    ||| ||||||||||||||||||    
T  56407 aaatattccctcatccaaacac 56428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 257 - 382
Target Start/End: Complemental strand, 56429 - 56304
Alignment:
Q  257 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtaatt 356  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||||| ||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagtt 56330  T
Q  357 gaattcgctcaaaacattacattccc 382  Q
    |||||| |||||||||||||||||||    
T  56329 gaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 4159 - 4080
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacac 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 4075 - 4150
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||||||| | ||||| |||||||  ||||||||||||||||||||||||| || ||||||||| ||||    
T  4075 agagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattc 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 83025 - 82943
Alignment:
Q  330 aacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacactctga 412  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacactga 82943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 82945 - 83018
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| | |||| |||||||| ||||||||||||||||||||||||| || ||| ||||| ||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 83018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 3e-22; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 42076 - 42002
Alignment:
Q  333 aatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||| |||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacac 42002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 41997 - 42072
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||| |||  ||||| |||||||| ||||||||||||||||||||||||| || ||||||||| ||||    
T  41997 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 42072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 42080 - 42132
Alignment:
Q  355 ttgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacac 42132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 42137 - 42080
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||| ||||||||    
T  42137 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattcaa 42080  T

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Target: scaffold0400 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 4487 - 4566
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| |||| || |||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacac 4566  T

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Target: scaffold0400; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 4570 - 4496
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||| |||| ||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 4496  T

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Target: scaffold0365 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 5131 - 5210
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||| |||| || |||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacac 5210  T

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Target: scaffold0365; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 5214 - 5140
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||| |||| ||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 5140  T

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Target: scaffold0129 (Bit Score: 47; Significance: 2e-17; HSPs: 4)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 19280 - 19203
Alignment:
Q  329 aaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    ||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattc-ctcaaaacattacattccctcaaaatactcccccatccaaacac 19203  T

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Target: scaffold0129; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 19200 - 19272
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||    
T  19200 agtgtgtttggatgggggagtattttgagggaatgtaatgttttga-ggaattcaaatattttgaggtgaattc 19272  T

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Target: scaffold0129; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 19784 - 19852
Alignment:
Q  338 aattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||||||||||| |||||||  || |||||||||||||||||||||||| |||| |||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacac 19852  T

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Target: scaffold0129; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 19855 - 19788
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtg 323  Q
    |||||||||||||| |||| | |||||||| ||||||||||||| ||  ||||||| || |||||||||    
T  19855 agtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtg 19788  T

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Target: scaffold0027 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 10970 - 10905
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattc 393  Q
    |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattc 10905  T

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Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 10887 - 10961
Alignment:
Q  254 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgaggtggattc 328  Q
    ||||||||||| |||   |||| |||| ||| ||||||||||||||||||||||||| || ||||| ||| ||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattcaaatactttgacgtgaattc 10961  T

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Target: scaffold0318 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 2950 - 2872
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||||||||| ||| |||||||||| |||| ||||||    
T  2950 caaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacac 2872  T

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Target: scaffold0318; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 2867 - 2930
Alignment:
Q  253 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 316  Q
    ||||||||||| |||| |||||| ||| |||  ||||||||||||||||||||||||| |||||    
T  2867 agagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaatattt 2930  T

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Target: scaffold0301 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 7235 - 7156
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||  ||||||| |||||||| || |||||| |||||||||||||||||||||  |||||||||||    
T  7235 caaacaatggaattcactccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacac 7156  T

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Target: scaffold0301; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 7153 - 7208
Alignment:
Q  255 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 310  Q
    ||||||||||||||  ||||| |||||||| |||||| |||||| |||||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaa 7208  T

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Target: scaffold0337 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 15855 - 15931
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| |||| |||||||||||    
T  15855 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacac 15931  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 2897 - 2973
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacattccctcaaaacattccctcatccaaacac 407  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| |||| |||||||||||    
T  2897 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacac 2973  T

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Target: scaffold0790 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 556 - 623
Target Start/End: Original strand, 3448 - 3515
Alignment:
Q  556 gttttgcgttggagtaatctggtttggttcacctcagctgtagcaagttttcgtgcaattttgcttct 623  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||| | | |||| |||| ||||||||||    
T  3448 gttttgctttggagtaatatggttttgttcagctcagctgtagtaggctttcatgcagttttgcttct 3515  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 17561 - 17620
Alignment:
Q  315 tttgaggtggattcaaacaatagaattcacctcaaagtaattgaattcgctcaaaacatt 374  Q
    |||||||||||  ||||||||| ||| |||||||||| | |||||||| |||||||||||    
T  17561 tttgaggtggaaccaaacaataaaatgcacctcaaaggagttgaattccctcaaaacatt 17620  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 130438 - 130388
Alignment:
Q  328 caaacaatagaattcacctcaaagtaattgaattcgctcaaaacattacat 378  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  130438 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 130388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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