View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6973_low_50 (Length: 362)

Name: NF6973_low_50
Description: NF6973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6973_low_50
NF6973_low_50
[»] chr8 (38 HSPs)
chr8 (1-351)||(33666620-33666970)
chr8 (67-245)||(13171876-13172056)
chr8 (116-223)||(2518641-2518749)
chr8 (180-225)||(25985509-25985554)
chr8 (110-223)||(36395199-36395314)
chr8 (87-245)||(36545042-36545204)
chr8 (157-245)||(36565468-36565559)
chr8 (90-223)||(40813220-40813357)
chr8 (69-142)||(45331912-45331985)
chr8 (178-245)||(2776456-2776524)
chr8 (84-223)||(30113446-30113587)
chr8 (173-225)||(32043573-32043625)
chr8 (169-225)||(39953511-39953567)
chr8 (67-166)||(36143244-36143342)
chr8 (173-223)||(5908625-5908675)
chr8 (157-245)||(2796521-2796612)
chr8 (188-245)||(9695629-9695686)
chr8 (180-245)||(45419227-45419292)
chr8 (149-217)||(29700236-29700303)
chr8 (173-245)||(34196055-34196127)
chr8 (177-245)||(45512722-45512790)
chr8 (278-321)||(10108972-10109015)
chr8 (180-223)||(18125163-18125206)
chr8 (180-223)||(18752124-18752167)
chr8 (172-243)||(30456441-30456512)
chr8 (278-321)||(38178340-38178383)
chr8 (186-225)||(41444573-41444612)
chr8 (125-223)||(44681288-44681388)
chr8 (178-220)||(11523976-11524018)
chr8 (110-223)||(39946775-39946890)
chr8 (131-211)||(29520599-29520681)
chr8 (173-214)||(39760682-39760723)
chr8 (173-245)||(7046317-7046389)
chr8 (156-223)||(8879689-8879759)
chr8 (177-225)||(12611522-12611570)
chr8 (251-279)||(38178330-38178358)
chr8 (182-226)||(38689530-38689574)
chr8 (181-225)||(42493553-42493597)
[»] chr4 (57 HSPs)
chr4 (113-245)||(54470128-54470262)
chr4 (87-245)||(31960041-31960201)
chr4 (178-245)||(35555874-35555941)
chr4 (87-245)||(52569742-52569902)
chr4 (87-223)||(436124-436262)
chr4 (87-223)||(12494645-12494783)
chr4 (87-245)||(33191075-33191235)
chr4 (157-223)||(33227173-33227242)
chr4 (278-321)||(38903798-38903841)
chr4 (178-245)||(40018410-40018477)
chr4 (179-225)||(44360076-44360122)
chr4 (84-212)||(35690196-35690326)
chr4 (173-222)||(44047598-44047647)
chr4 (87-223)||(56375185-56375323)
chr4 (277-321)||(6843773-6843817)
chr4 (173-225)||(10775669-10775721)
chr4 (98-245)||(17900386-17900535)
chr4 (173-225)||(33709907-33709959)
chr4 (182-226)||(49738850-49738894)
chr4 (170-225)||(6478915-6478970)
chr4 (182-245)||(10209026-10209089)
chr4 (178-225)||(41192824-41192871)
chr4 (178-245)||(43433912-43433979)
chr4 (87-245)||(48622770-48622928)
chr4 (143-225)||(51252708-51252791)
chr4 (87-220)||(27983095-27983230)
chr4 (172-225)||(31897675-31897726)
chr4 (179-225)||(36557276-36557322)
chr4 (67-226)||(38903966-38904126)
chr4 (173-245)||(1380350-1380422)
chr4 (78-138)||(30853302-30853362)
chr4 (178-245)||(934663-934729)
chr4 (278-313)||(7544611-7544646)
chr4 (67-142)||(11389595-11389670)
chr4 (180-223)||(27450428-27450471)
chr4 (278-321)||(32339718-32339761)
chr4 (170-225)||(46372004-46372059)
chr4 (283-321)||(22420797-22420835)
chr4 (178-224)||(42639268-42639314)
chr4 (278-316)||(47147532-47147570)
chr4 (180-245)||(4440843-4440908)
chr4 (178-223)||(23906544-23906589)
chr4 (178-223)||(26037754-26037799)
chr4 (180-245)||(28236173-28236238)
chr4 (178-215)||(28497478-28497515)
chr4 (178-223)||(30621453-30621498)
chr4 (178-223)||(31459018-31459063)
chr4 (178-223)||(37797840-37797885)
chr4 (184-225)||(45423609-45423650)
chr4 (178-223)||(48174342-48174387)
chr4 (180-216)||(14623500-14623536)
chr4 (178-218)||(25967515-25967555)
chr4 (278-318)||(26024933-26024973)
chr4 (278-318)||(26025002-26025042)
chr4 (173-225)||(31339520-31339571)
chr4 (183-243)||(42293478-42293538)
chr4 (178-226)||(51841437-51841485)
[»] chr6 (17 HSPs)
chr6 (98-243)||(33083964-33084111)
chr6 (67-242)||(14030681-14030859)
chr6 (87-223)||(28085271-28085409)
chr6 (182-245)||(21870300-21870363)
chr6 (86-223)||(5258397-5258538)
chr6 (87-223)||(9706671-9706809)
chr6 (180-224)||(14389415-14389459)
chr6 (178-225)||(6641656-6641703)
chr6 (157-223)||(20427885-20427954)
chr6 (178-223)||(32755909-32755954)
chr6 (178-242)||(5631810-5631874)
chr6 (88-223)||(12134150-12134287)
chr6 (181-245)||(12890575-12890639)
chr6 (87-166)||(31818433-31818511)
chr6 (180-245)||(7513618-7513683)
chr6 (178-223)||(9593955-9594000)
chr6 (178-223)||(30031244-30031289)
[»] chr7 (47 HSPs)
chr7 (115-223)||(36136687-36136797)
chr7 (180-245)||(36514434-36514499)
chr7 (110-223)||(37617862-37617977)
chr7 (180-225)||(19262680-19262725)
chr7 (87-223)||(33072849-33072985)
chr7 (67-223)||(47848549-47848707)
chr7 (87-245)||(12841502-12841662)
chr7 (87-245)||(33350033-33350193)
chr7 (87-245)||(34869315-34869475)
chr7 (87-245)||(35906428-35906588)
chr7 (87-245)||(49029171-49029331)
chr7 (191-245)||(40830224-40830278)
chr7 (86-223)||(45836729-45836868)
chr7 (157-245)||(13859235-13859326)
chr7 (87-223)||(31005118-31005256)
chr7 (90-218)||(39811855-39811985)
chr7 (180-241)||(45558352-45558413)
chr7 (173-245)||(28020947-28021019)
chr7 (185-245)||(38920789-38920849)
chr7 (180-223)||(7189475-7189518)
chr7 (158-223)||(6374833-6374901)
chr7 (178-219)||(1523812-1523853)
chr7 (180-245)||(5335910-5335975)
chr7 (87-223)||(11593855-11593993)
chr7 (196-237)||(38616867-38616908)
chr7 (180-225)||(48736146-48736191)
chr7 (181-245)||(2885949-2886013)
chr7 (178-218)||(27021946-27021986)
chr7 (179-223)||(32630583-32630627)
chr7 (178-218)||(46989891-46989931)
chr7 (278-321)||(29653626-29653669)
chr7 (278-321)||(30144934-30144977)
chr7 (173-216)||(37439597-37439640)
chr7 (157-223)||(39906619-39906688)
chr7 (278-321)||(40139028-40139071)
chr7 (180-223)||(43281664-43281707)
chr7 (178-213)||(43282396-43282431)
chr7 (157-223)||(46356105-46356174)
chr7 (183-245)||(28858037-28858099)
chr7 (180-245)||(30632958-30633023)
chr7 (185-226)||(30914714-30914755)
chr7 (157-245)||(44855399-44855490)
chr7 (178-223)||(46014429-46014474)
chr7 (278-322)||(28858204-28858248)
chr7 (282-314)||(30200051-30200083)
chr7 (180-244)||(41070057-41070121)
chr7 (178-218)||(42177269-42177309)
[»] chr2 (30 HSPs)
chr2 (87-245)||(8180675-8180835)
chr2 (87-223)||(36183346-36183484)
chr2 (67-223)||(38429759-38429917)
chr2 (67-223)||(41763291-41763448)
chr2 (278-334)||(12026072-12026128)
chr2 (178-225)||(4598809-4598856)
chr2 (68-216)||(7292864-7293012)
chr2 (178-223)||(43752196-43752241)
chr2 (78-225)||(23714508-23714654)
chr2 (78-225)||(24102180-24102326)
chr2 (173-225)||(38434934-38434986)
chr2 (149-243)||(11017272-11017367)
chr2 (173-223)||(11412704-11412754)
chr2 (178-223)||(4807584-4807629)
chr2 (178-223)||(25834669-25834714)
chr2 (180-225)||(42092507-42092552)
chr2 (178-222)||(12905082-12905126)
chr2 (181-245)||(18188771-18188835)
chr2 (178-245)||(2610576-2610643)
chr2 (180-223)||(19337099-19337142)
chr2 (178-245)||(38452912-38452979)
chr2 (142-223)||(45367874-45367957)
chr2 (184-226)||(1456224-1456266)
chr2 (185-223)||(12141539-12141577)
chr2 (180-222)||(36819165-36819207)
chr2 (178-223)||(227310-227355)
chr2 (87-223)||(3865967-3866105)
chr2 (186-223)||(18958903-18958940)
chr2 (67-124)||(28908492-28908549)
chr2 (278-314)||(11006866-11006902)
[»] scaffold0024 (1 HSPs)
scaffold0024 (67-223)||(82596-82754)
[»] chr1 (44 HSPs)
chr1 (103-223)||(9599643-9599765)
chr1 (67-223)||(19936397-19936547)
chr1 (87-245)||(1210640-1210800)
chr1 (67-223)||(696144-696302)
chr1 (70-223)||(1661304-1661463)
chr1 (87-223)||(8391667-8391805)
chr1 (67-223)||(9592609-9592767)
chr1 (67-223)||(15085809-15085967)
chr1 (177-245)||(3819083-3819151)
chr1 (142-217)||(39140469-39140547)
chr1 (67-225)||(26016312-26016472)
chr1 (67-245)||(40419514-40419694)
chr1 (87-245)||(22089989-22090151)
chr1 (178-223)||(2544587-2544632)
chr1 (178-219)||(9509306-9509347)
chr1 (87-223)||(30202379-30202517)
chr1 (157-245)||(34792576-34792667)
chr1 (184-245)||(37263325-37263386)
chr1 (173-225)||(43423702-43423754)
chr1 (110-245)||(51440992-51441129)
chr1 (87-245)||(8671815-8671973)
chr1 (158-223)||(4001704-4001772)
chr1 (178-224)||(40416359-40416405)
chr1 (178-223)||(27848054-27848099)
chr1 (178-223)||(32082994-32083039)
chr1 (157-245)||(32231181-32231272)
chr1 (180-245)||(38868872-38868937)
chr1 (182-219)||(52073716-52073753)
chr1 (277-321)||(12231523-12231567)
chr1 (181-225)||(16943166-16943210)
chr1 (178-226)||(17143103-17143151)
chr1 (180-223)||(37463122-37463165)
chr1 (178-245)||(38807898-38807965)
chr1 (178-225)||(51812513-51812560)
chr1 (282-316)||(6299478-6299512)
chr1 (142-223)||(52561860-52561944)
chr1 (180-225)||(13827964-13828009)
chr1 (180-225)||(18793235-18793280)
chr1 (178-223)||(35828799-35828844)
chr1 (178-223)||(36340052-36340097)
chr1 (180-245)||(51602046-51602111)
chr1 (178-226)||(13579111-13579159)
chr1 (173-225)||(17267943-17267995)
chr1 (184-216)||(39525775-39525807)
[»] chr5 (31 HSPs)
chr5 (178-245)||(15489719-15489786)
chr5 (87-245)||(24178405-24178565)
chr5 (183-245)||(33667209-33667271)
chr5 (180-245)||(31636147-31636212)
chr5 (153-242)||(14749267-14749359)
chr5 (101-225)||(219700-219826)
chr5 (157-245)||(4496348-4496439)
chr5 (178-223)||(14667751-14667796)
chr5 (87-223)||(28977108-28977244)
chr5 (180-223)||(418236-418279)
chr5 (87-245)||(1275160-1275319)
chr5 (178-245)||(1287806-1287873)
chr5 (277-316)||(4460365-4460404)
chr5 (278-321)||(28005694-28005737)
chr5 (88-142)||(5848408-5848462)
chr5 (278-344)||(28186832-28186898)
chr5 (158-223)||(38684932-38685000)
chr5 (178-223)||(79501-79546)
chr5 (188-245)||(10082966-10083023)
chr5 (180-245)||(11002650-11002715)
chr5 (150-223)||(15168749-15168825)
chr5 (67-175)||(9234944-9235051)
chr5 (87-221)||(2075725-2075861)
chr5 (182-245)||(2712936-2712999)
chr5 (182-233)||(15370030-15370081)
chr5 (174-225)||(15588787-15588838)
chr5 (186-245)||(18351135-18351194)
chr5 (178-245)||(34273015-34273082)
chr5 (86-223)||(16347627-16347766)
chr5 (180-225)||(1174590-1174635)
chr5 (184-241)||(11729085-11729142)
[»] chr3 (45 HSPs)
chr3 (67-245)||(28245312-28245492)
chr3 (86-223)||(54128272-54128411)
chr3 (179-243)||(3987036-3987100)
chr3 (180-232)||(34719312-34719364)
chr3 (110-245)||(52138718-52138855)
chr3 (142-223)||(344960-345044)
chr3 (103-220)||(27917483-27917600)
chr3 (142-223)||(49503803-49503887)
chr3 (183-223)||(50960882-50960922)
chr3 (131-225)||(36820208-36820302)
chr3 (157-245)||(43694992-43695078)
chr3 (173-223)||(39600930-39600980)
chr3 (142-223)||(54278969-54279053)
chr3 (178-223)||(22061-22106)
chr3 (178-223)||(5168820-5168865)
chr3 (87-245)||(33272249-33272415)
chr3 (178-223)||(35033134-35033179)
chr3 (278-323)||(46431757-46431802)
chr3 (87-223)||(51447959-51448096)
chr3 (87-242)||(25191274-25191429)
chr3 (126-225)||(31337773-31337872)
chr3 (173-225)||(50249367-50249419)
chr3 (74-142)||(50632163-50632231)
chr3 (184-223)||(26490309-26490348)
chr3 (178-232)||(29374921-29374976)
chr3 (178-241)||(54485526-54485589)
chr3 (178-223)||(19736984-19737030)
chr3 (178-223)||(19757887-19757933)
chr3 (180-245)||(21200540-21200603)
chr3 (182-224)||(39535688-39535730)
chr3 (190-232)||(44395424-44395466)
chr3 (178-243)||(11581432-11581497)
chr3 (178-223)||(19676329-19676374)
chr3 (183-216)||(31208971-31209004)
chr3 (178-223)||(38060419-38060464)
chr3 (182-223)||(38430840-38430881)
chr3 (178-223)||(45728135-45728180)
chr3 (180-217)||(54365231-54365268)
chr3 (278-322)||(29475845-29475889)
chr3 (182-225)||(31453185-31453229)
chr3 (173-225)||(31454473-31454524)
chr3 (278-314)||(41452827-41452863)
chr3 (98-162)||(42510324-42510387)
chr3 (178-223)||(45289340-45289387)
chr3 (182-242)||(50632065-50632125)
[»] scaffold0157 (1 HSPs)
scaffold0157 (87-223)||(25694-25832)
[»] scaffold0373 (1 HSPs)
scaffold0373 (277-321)||(2381-2425)
[»] scaffold0018 (2 HSPs)
scaffold0018 (178-245)||(31456-31523)
scaffold0018 (88-217)||(44123-44257)
[»] scaffold0113 (1 HSPs)
scaffold0113 (178-223)||(11845-11890)
[»] scaffold0005 (1 HSPs)
scaffold0005 (180-216)||(193847-193883)


Alignment Details
Target: chr8 (Bit Score: 339; Significance: 0; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1 - 351
Target Start/End: Complemental strand, 33666970 - 33666620
Alignment:
Q  1 ttcatggtgggtggttgaagagaaaaatttatcttacaaactgtaagactgttgatgttgtatgtcagtgttggggggtaaaaaaccaacatgagagtaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33666970 ttcatggtgggtggttgaagagaaaaatttatcatacaaactgtaagaccgttgatgttgtatgtcagtgttggggggtaaaaaaccaacatgagagtaa 33666871  T
Q  101 aataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataagagagagagttggggtagcacc 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33666870 aataagcgcagcagagatgagaatattttattggatgtgtgggtaaggctagatgagataggattaagaatgacataagagagagagttggggtagcacc 33666771  T
Q  201 tatcgtagaaaagatggtagaaactctacttaaatggtttgggcagagatatgagttggatagagatatgatatatgactattaagaaagacctagagat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33666770 tatcgtagaaaagatggtagaaactctacttaaatggtttgggcagagatatgagttggatagagatatgatatatgactattaagaaagacctagagat 33666671  T
Q  301 taatgagtttgatagagatattacaaaatattatggcttcgtttcattcat 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33666670 taatgagtttgatagagatattacaaaatattatggcttcgtttcattcat 33666620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 245
Target Start/End: Complemental strand, 13172056 - 13171876
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || ||||||||| | | |||| ||||| || ||||||||||||| ||| ||||||||||| | |||| ||||| | ||||||||||    
T  13172056 agtgttgggcggttaagaaccaacataaaaataaattaagcacatcagagatgagaatgttgcattggatgtgtag-taagactagacgggataggatta 13171958  T
Q  167 agaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
      |||||||   | |||||||||||||||| ||||||||| |||||||||||||| |||| | | ||||  |||||||||||    
T  13171957 gaaatgacaagattagagagagagttggggaagcacctatagtagaaaagatggtggaaaatatgcttaggtggtttgggca 13171876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 2518749 - 2518641
Alignment:
Q  116 gatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacata--agagagagagttggggtagcacctatcgtagaaaag 213  Q
    ||||||||| ||| ||||||||||||| |||| ||||||||||||||||||  ||||||| |  ||||||| | ||||||||||||||   |||||||||    
T  2518749 gatgagaatgttgcattggatgtgtgg-taagactagatgagataggattagaaatgacaaattagagagaaaattggggtagcacctcaagtagaaaag 2518651  T
Q  214 atggtagaaa 223  Q
    ||||| ||||    
T  2518650 atggtggaaa 2518641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 25985509 - 25985554
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  25985509 agagagagttggggtagcacctatagtagaaaagatggtagaaact 25985554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 36395314 - 36395199
Alignment:
Q  110 agcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgt 206  Q
    |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||||||| |||||||||||||| ||    
T  36395314 agcagagatgaggatgttgcgttggatgagtgg-taagactagacaggataggattaggaatgacaccattagagagagagtgggggtagcacctatagt 36395216  T
Q  207 agaaaagatggtagaaa 223  Q
    ||||||| |||||||||    
T  36395215 agaaaagttggtagaaa 36395199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 36545042 - 36545204
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca----ta-agag 181  Q
    |||||||||| | || |||| | |||||||||||| || |||| ||||||| || |||||| |||||   |||||||||| ||||||||    || ||||    
T  36545042 caacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagt-ggtaagactagacatgataggattaggaatgacaccattagagag 36545140  T
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| |||||| ||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  36545141 agagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 36545204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 36565559 - 36565468
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  36565559 gataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 36565468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 40813220 - 40813357
Alignment:
Q  90 catgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca----ta-agagaga 184  Q
    ||||||| |||| |||| | ||||||||| || || |||| ||||||| |||| |||| |||||    ||||||||||||||||||    || |||||||    
T  40813220 catgagaataaagtaagtgtagcagagattaggatgttgtgttggatgagtgg-taagactagacataataggattaagaatgacaccattagagagaga 40813318  T
Q  185 gagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||| |||||||||||||| ||||||||| |||||||||    
T  40813319 gagtgggggtagcacctatagtagaaaagttggtagaaa 40813357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 45331985 - 45331912
Alignment:
Q  69 tgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgg 142  Q
    ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||| | ||||  |||||| |||||    
T  45331985 tgttgggcggtaaagaaccaacatgagaataaaataagcgcaacagagatgaggacattgcgttggatttgtgg 45331912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 2776524 - 2776456
Alignment:
Q  178 agagagagagttgggg-tagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||||  ||||  |||||||||||    
T  2776524 agagagagagctgggggtagcacctatcgtagaaatgatggtagaaactcggcttaggtggtttgggca 2776456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 30113587 - 30113446
Alignment:
Q  84 aaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataa---ga 180  Q
    ||||||||||||| ||||||||||| ||  ||||||||||| ||||  | ||||| ||  ||||  |||||  |||| ||||| ||||||||| |   ||    
T  30113587 aaccaacatgagaataaaataagcgtagaggagatgagaatgttgtgctagatgtttgt-taagaatagatatgataagattatgaatgacattattaga 30113489  T
Q  181 gagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||| |||||| ||| ||| |||||||||||||||||||    
T  30113488 gagagagtcggggtaacacatatagtagaaaagatggtagaaa 30113446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 32043573 - 32043625
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| |||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  32043573 acattagagagagagttggggtatcacctatagtacaaaagatggtagaaact 32043625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 39953567 - 39953511
Alignment:
Q  169 aatgacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||| ||||||||||||||| ||||||||||   |||||||||||||||||||    
T  39953567 aatgacattagagagagagttgggatagcacctatatgagaaaagatggtagaaact 39953511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 36143244 - 36143342
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || |||||||| |||| |||||| | || |||||||||||| || |||| ||||  |||| |||||| ||||||||||||||||||    
T  36143244 agtgttgggcggtgaagaaccaacacgagaataaaatcaacgtagcagagatgaggatgttgtgttggtcgtgt-ggtaagactagatgagataggatta 36143342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 5908625 - 5908675
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| ||||    
T  5908625 acattagagagagagttggggtagaacctatagtagaaaagatggttgaaa 5908675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 2796521 - 2796612
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||   | ||||||||||| |||||||| ||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  2796521 gataggattaggaatgacaccattagagagagagtgggggtagcgcctatagtagaaaagttggtagaaaataggcttagatggtttgggca 2796612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 9695629 - 9695686
Alignment:
Q  188 ttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||||||| |||||||||||||| |||||||  ||||  |||||||||||    
T  9695629 ttggggtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgggca 9695686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 45419227 - 45419292
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||| |  |||||  |||||||||||    
T  45419227 agagagaattggggtagcacctatagtagaaaagatggtataaaatagacttaggtggtttgggca 45419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 29700236 - 29700303
Alignment:
Q  149 ctagatgagataggattaagaatgacataagagagagagttggggtagcacctatcgtagaaaagatgg 217  Q
    ||||||||||||||||||  ||||| | | |  |||||||||||||||||||||| |||||||||||||    
T  29700236 ctagatgagataggattagaaatgaaa-atgttagagagttggggtagcacctatagtagaaaagatgg 29700303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 34196055 - 34196127
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||| ||| |||||||||||||||||||||| |||||||| |  |||||||||  |||||  |||||||||||    
T  34196055 acatgagacagagagttggggtagcacctatagtagaaaaaacagtagaaactagacttatgtggtttgggca 34196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 45512790 - 45512722
Alignment:
Q  177 aagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| ||||||||||||||||||| |||||||||||| | |||| |   |||| ||||||||||||    
T  45512790 aagagagggagttggggtagcacctatagtagaaaagatgatggaaaataagcttagatggtttgggca 45512722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 10108972 - 10109015
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||    
T  10108972 actaataagaaagatctagagattaacgagtttgatagagatat 10109015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 18125163 - 18125206
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||    
T  18125163 agagagagtgggggtagcacctatagtagaaaagttggtagaaa 18125206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 18752167 - 18752124
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||    
T  18752167 agagagagtgggggtagcacctatagtagaaaagttggtagaaa 18752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 30456512 - 30456441
Alignment:
Q  172 gacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttggg 243  Q
    ||||| ||||||| |||| | || |||||||| |||||||||||||||||||||  |||||  |||||||||    
T  30456512 gacattagagagatagttcgagttgcacctatagtagaaaagatggtagaaactagacttatgtggtttggg 30456441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 38178383 - 38178340
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||    
T  38178383 actattaacaaagacctagacattaatgagttggatagagatat 38178340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 41444612 - 41444573
Alignment:
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  41444612 agttggggtagcacctatagtagaaaagatggtggaaact 41444573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 44681388 - 44681288
Alignment:
Q  125 attgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtaga 221  Q
    |||| ||||||||||||| |||| ||||| |||||| |||||  |||||||   | ||||||| ||||| ||||||||||||  ||||||||||||| ||    
T  44681388 attgcattggatgtgtgg-taagactagacgagataagattagaaatgacaacattagagagacagttgtggtagcacctataatagaaaagatggtgga 44681290  T
Q  222 aa 223  Q
    ||    
T  44681289 aa 44681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 11524018 - 11523976
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtag 220  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||    
T  11524018 agagagagagtgggggtagcacctatagtagaaaagttggtag 11523976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 39946775 - 39946890
Alignment:
Q  110 agcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgt 206  Q
    |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | | ||| ||||| |||||||||||||| ||    
T  39946775 agcagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggattatgaatgacaccattatagaaagagtgggggtagcacctatagt 39946873  T
Q  207 agaaaagatggtagaaa 223  Q
    ||||||| |||||||||    
T  39946874 agaaaagttggtagaaa 39946890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 29520599 - 29520681
Alignment:
Q  131 ttggatgtgtgggtaaggctagatgagataggattaagaatga---cataagagagagagttggggtagcacctatcgtagaaa 211  Q
    |||||||||||| |||| ||||||| ||||||||||  |||||   ||| ||||||||||||||||| ||| |||| |||||||    
T  29520599 ttggatgtgtgg-taagactagatgggataggattagaaatgataccattagagagagagttggggtggcatctatagtagaaa 29520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 39760723 - 39760682
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaaga 214  Q
    |||| ||||| ||||||||| |||||||||||||||||||||    
T  39760723 acattagagacagagttgggttagcacctatcgtagaaaaga 39760682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 7046317 - 7046389
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||| ||||||||||   |||||||||| ||||||||||||||||| ||| |||  ||||  |||||||||||    
T  7046317 acattagagagagaggctgggtagcaccaatcgtagaaaagatggtggaacctcggcttagctggtttgggca 7046389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 8879759 - 8879689
Alignment:
Q  156 agataggattaagaatgac---ataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||   || ||||||||| | |||| ||||||||| ||||||||| |||||||||    
T  8879759 agataggattaggaatgacacaattagagagagaatgggggaagcacctatagtagaaaagttggtagaaa 8879689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 12611522 - 12611570
Alignment:
Q  177 aagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||||||| ||| ||||||||||  |||||||||||||| ||||||    
T  12611522 aagagagagagctggtgtagcacctaaagtagaaaagatggtggaaact 12611570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 279
Target Start/End: Complemental strand, 38178358 - 38178330
Alignment:
Q  251 atgagttggatagagatatgatatatgac 279  Q
    |||||||||||||||||||||||||||||    
T  38178358 atgagttggatagagatatgatatatgac 38178330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 38689530 - 38689574
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
    ||||||||||||||   ||||| ||||||||||||||||||||||    
T  38689530 agagagttggggtaatgcctattgtagaaaagatggtagaaactc 38689574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 42493597 - 42493553
Alignment:
Q  181 gagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||||||||||| ||||||| ||||||||||| || ||||||    
T  42493597 gagagagttggggtaacacctatagtagaaaagattgtggaaact 42493553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 245
Target Start/End: Original strand, 54470128 - 54470262
Alignment:
Q  113 agagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatt---aagaatgacataagagagagagttggggtagcacctatcgtaga 209  Q
    ||||||||| || ||| ||||||||||||| |||| ||||||| |||| ||||   || ||  |||| |||||||||||||||||||||||||| |||||    
T  54470128 agagatgaggatgttgcattggatgtgtgg-taagactagatgggatatgatttgaaataacaacattagagagagagttggggtagcacctatagtaga 54470226  T
Q  210 aaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||| ||||||  |||||| |||||||||||    
T  54470227 aaagatggtggaaactagacttaagtggtttgggca 54470262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 31960201 - 31960041
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  31960201 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacaggataggattaggaatgacaccattagagag 31960103  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  31960102 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 31960041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 35555941 - 35555874
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||  |||||  |||||||||||    
T  35555941 agagagagagttcgggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggca 35555874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 52569902 - 52569742
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | ||||||||| || || |||| ||||||| | ||||||| |||||   |||||||||| ||||||||   | ||||||    
T  52569902 caacatgagaatcaagtaagtgtagcagagatcaggatgttgtgttggatgag-gggtaagactagacaggataggattaggaatgacaccattagagag 52569804  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  52569803 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 52569742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 436124 - 436262
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| || | |||| |||||   |||||||||||||||||||   | ||||||    
T  436124 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtcg-taagactagacatgataggattaagaatgacaccattagagag 436222  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  436223 agagtgggggtagcacctatagtagaaaagttggtagaaa 436262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 12494645 - 12494783
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  12494645 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 12494743  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  12494744 agagtgggggtagcacctatagtagaaaagttggtagaaa 12494783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 33191235 - 33191075
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||   |||||| |||| ||||  |||||  |||||||||| ||||||||   | ||||||    
T  33191235 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtgg-taagattagataggataggattaggaatgacaccattagagag 33191137  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |  ||||| || |||||||||    
T  33191136 agagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagattgtttgggca 33191075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 33227173 - 33227242
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  33227173 gataggattaagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 33227242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 38903841 - 38903798
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  38903841 actattaagaaagacctaaagattaatgagtttgatagagatat 38903798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 40018477 - 40018410
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||   ||||  |||||||||||    
T  40018477 agagagagaattggggtagcacctatcgtaaaaaagatggtagaaacttggcttatgtggtttgggca 40018410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 44360076 - 44360122
Alignment:
Q  179 gagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  44360076 gagagagagttggggtatcacctatagtagaaaagatggtagaaact 44360122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 212
Target Start/End: Original strand, 35690196 - 35690326
Alignment:
Q  84 aaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taaga 180  Q
    ||||||||||||| | || |||| | ||| |||||||| || |||  ||||||| || | |||| ||||| |||||||||||| ||||||||   | | |    
T  35690196 aaccaacatgagaatcaagtaagtgtagccgagatgaggatgttgcgttggatgagtag-taagactagacgagataggattaggaatgacacctttaaa 35690294  T
Q  181 gagagagttggggtagcacctatcgtagaaaa 212  Q
    ||||||||||||||||||||||| ||||||||    
T  35690295 gagagagttggggtagcacctatagtagaaaa 35690326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 44047647 - 44047598
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaa 222  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  44047647 acattagagagagagttggggtagcacctatagtagaaaaggtggtagaa 44047598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 56375185 - 56375323
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | ||| ||| | |||||||||||| || |||  ||||||| |||| |||| |||||  ||||| ||||| ||||||||   | ||||||    
T  56375185 caacatgagaatcaaacaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacaagataagattaggaatgacaccattagagag 56375283  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| ||||||||||||||  |||||||| |||||||||    
T  56375284 agagtaggggtagcacctataatagaaaagttggtagaaa 56375323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 6843773 - 6843817
Alignment:
Q  277 gactattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  6843773 gactattaagaaagatctagagattaatgagtttgatagaaatat 6843817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 10775721 - 10775669
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| |||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  10775721 acattagagagagtgttggggtaacacctatagtagaaaagatggtagaaact 10775669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 17900386 - 17900535
Alignment:
Q  98 taaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgac---ataagagagagagttggggt 194  Q
    |||| |||||| |||||| ||||| || |||  |||||||||||| |||| ||||||| ||||  ||||  ||||||   || |||||  ||||||||||    
T  17900386 taaagtaagcgtagcagaaatgaggatgttgcgttggatgtgtgg-taagactagatgggataaaattagaaatgacgacattagagacggagttggggt 17900484  T
Q  195 agcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||| |||||||||| ||||||||||  ||| |  |||||||||||    
T  17900485 agcacctatagtagaaaagacggtagaaactagactcatgtggtttgggca 17900535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 33709907 - 33709959
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  33709907 acattagagagagagttggggtaacacctatagtagaaaagatggtggaaact 33709959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 49738894 - 49738850
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  49738894 agagagctggggtagcacctattgtagaaaagatggtagaaactc 49738850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 6478970 - 6478915
Alignment:
Q  170 atgacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||| |||| |||||||||||| |||||||| ||||||||||||||| |||||    
T  6478970 atgacattagagtgagagttggggtggcacctatagtagaaaagatggtaaaaact 6478915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 10209026 - 10209089
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||  |||||  |||||||||||    
T  10209026 agagagttggggtagaacctatagtagaaaagatggcagaaactaaacttagttggtttgggca 10209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 41192824 - 41192871
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  41192824 agagagagagttggggtagcacctacagtagaaaagatggtggaaact 41192871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 43433912 - 43433979
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  43433912 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 43433979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 48622928 - 48622770
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataag-agagag 185  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||  |  ||||||    
T  48622928 caacatgagaatcaagtaagtgtagcagagatgaggatgttgctttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 48622830  T
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||| ||||||||||| || ||||||||| ||||||||| |   |||| ||||||||||||    
T  48622829 agtgggggtagcacccatagtagaaaagttggtagaaaataggcttagatggtttgggca 48622770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 51252791 - 51252708
Alignment:
Q  143 gtaaggctagatgagataggattaagaatgac-ataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||| ||||| ||||||||||||  |||||| | |  |||||||||||||||||||||| | |||||||||||||| ||||||    
T  51252791 gtaagactagacgagataggattagaaatgactacattagagagagttggggtagcacctctagtagaaaagatggtggaaact 51252708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 27983095 - 27983230
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    ||||||||||||||| |||| | ||| |||||||| |||||||  | |||| |||| |||| ||| |   |||||||||| ||||||||   | ||||||    
T  27983095 caacatgagagtaaagtaagtgtagcggagatgaggatattgtgctagatgagtgg-taagactatacatgataggattaggaatgacaccattagagag 27983193  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtag 220  Q
    |||||  ||||||||||||| ||||||||| ||||||    
T  27983194 agagtgagggtagcacctatagtagaaaagttggtag 27983230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 31897726 - 31897675
Alignment:
Q  172 gacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||| ||||||| |||||||||||||||||  |||||||||||||||||||||    
T  31897726 gacattagagagatagttggggtagcaccta--gtagaaaagatggtagaaact 31897675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 36557322 - 36557276
Alignment:
Q  179 gagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||    
T  36557322 gagagagagttggggcagcacccatagtagaaaagatggtagaaact 36557276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 38904126 - 38903966
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    |||||||||  ||||||||||||||  ||| ||||||||| | |||| |||||||||| ||||||| ||| |||  ||||| ||||| || |||||||||    
T  38904126 agtgttgggcagtaaaaaaccaacacaagaataaaataagtgtagcaaagatgagaatgttgtatttgatttgt-agtaagactagaagatataggatta 38904028  T
Q  167 agaat--gacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
     ||||   | || |  |||||| |  |||||||||| ||| ||||||||||||| |||||||    
T  38904027 ggaatacaatattaccgagagactctgggtagcaccgatcatagaaaagatggtggaaactc 38903966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 1380350 - 1380422
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||| ||||||||||||||| || |||||| ||||||||| ||| |||||||||  ||||  |||||||||||    
T  1380350 acattagagagagagttgggataacacctaccgtagaaaacatgatagaaactcggcttaggtggtttgggca 1380422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 30853302 - 30853362
Alignment:
Q  78 gtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgt 138  Q
    |||||||||||||| |||| ||||||||||||||| |||||||  || |||| ||||||||    
T  30853302 gtaaaaaaccaacacgagaataaaataagcgcagcggagatgaagatgttgtgttggatgt 30853362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 934729 - 934663
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||| ||||||||| |||||||| | |||||||||||||||||||  ||||  |||||||||||    
T  934729 agagagagggttggggtatcacctatcat-gaaaagatggtagaaactcatcttaggtggtttgggca 934663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 7544646 - 7544611
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgat 313  Q
    |||||||||||||| |||||||||||||||||||||    
T  7544646 actattaagaaagatctagagattaatgagtttgat 7544611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 11389595 - 11389670
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgg 142  Q
    ||||||||| ||| || |||||||  |||| |||| |||||| |||||||||||| || ||| |||||||||||||    
T  11389595 agtgttgggcggttaagaaccaactcgagaataaagtaagcgtagcagagatgaggatgttggattggatgtgtgg 11389670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 27450471 - 27450428
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||    
T  27450471 agagagagtgggggtagcacctatagtagaaaagttggtagaaa 27450428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 32339718 - 32339761
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||    
T  32339718 actattaagaaatacctagagattaacgagttggatagagatat 32339761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 46372004 - 46372059
Alignment:
Q  170 atgacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||| ||||| |||||||||||||||||||| || ||||| || |||||||||    
T  46372004 atgacattagagatagagttggggtagcacctatagtcgaaaatattgtagaaact 46372059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 22420835 - 22420797
Alignment:
Q  283 taagaaagacctagagattaatgagtttgatagagatat 321  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  22420835 taagaaagatctagagattaatgagttggatagagatat 22420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 42639314 - 42639268
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaac 224  Q
    |||||||||||| |||| |||||||| |||||||||||||| |||||    
T  42639314 agagagagagttagggttgcacctatagtagaaaagatggtggaaac 42639268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 47147532 - 47147570
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgataga 316  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  47147532 actattaagaaagatctagagattaatgagttggataga 47147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 4440843 - 4440908
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||| |||| ||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  4440843 agagagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 4440908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 23906589 - 23906544
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| | |||||||    
T  23906589 agagagagagtgggggtagcacctatagtagaaaagtttgtagaaa 23906544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 26037799 - 26037754
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||  ||||||||||||| ||||||||| |||||||||    
T  26037799 agagagagagtgagggtagcacctatagtagaaaagttggtagaaa 26037754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 28236173 - 28236238
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||| |||||||||||||| ||||||||| |||| |||| |   |||| ||||||||||||    
T  28236173 agagagagtgggggtagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggca 28236238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 28497478 - 28497515
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagat 215  Q
    |||||||||||||||||||||||| | |||||||||||    
T  28497478 agagagagagttggggtagcacctttagtagaaaagat 28497515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 30621498 - 30621453
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| ||||||||||||||| ||| |||||||||||||| ||||    
T  30621498 agagagggagttggggtagcacttatagtagaaaagatggtggaaa 30621453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 31459018 - 31459063
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| ||||| | |||||||||||| |||||||||||||||||||    
T  31459018 agagacagagtcgaggtagcacctatagtagaaaagatggtagaaa 31459063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 37797840 - 37797885
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| | |||||||||||| ||||||||| |||||||||    
T  37797840 agagagagagtggaggtagcacctatagtagaaaagttggtagaaa 37797885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 45423609 - 45423650
Alignment:
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||| ||||||||||||  ||||||||||||||||||||    
T  45423609 agagttgaggtagcacctataatagaaaagatggtagaaact 45423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 48174387 - 48174342
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||| ||||||| ||||||||| |||||||||    
T  48174387 agagagagagtgggggtaacacctatagtagaaaagttggtagaaa 48174342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 14623536 - 14623500
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatg 216  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  14623536 agagagagttggagtagcacctattgtagaaaagatg 14623500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 25967555 - 25967515
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggt 218  Q
    ||||||||||| ||||||| | |||||||||||||||||||    
T  25967555 agagagagagtcggggtagtatctatcgtagaaaagatggt 25967515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 26024973 - 26024933
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagaga 318  Q
    |||||||||||||| ||||||||||||||||| ||| ||||    
T  26024973 actattaagaaagatctagagattaatgagttggatcgaga 26024933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 26025042 - 26025002
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagaga 318  Q
    |||||||||||||| ||||||||||||||||| ||| ||||    
T  26025042 actattaagaaagatctagagattaatgagttggatcgaga 26025002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 31339520 - 31339571
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| ||||||||||||||||||| |||||| |||||||| ||||| ||||||    
T  31339520 acattagagagagagttggggtagaacctatggtagaaaa-atggtcgaaact 31339571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 42293538 - 42293478
Alignment:
Q  183 gagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttggg 243  Q
    ||||||||| ||||||||||| |||||||||||| | |||||||  ||||  |||||||||    
T  42293538 gagagttggcgtagcacctatagtagaaaagatgatggaaactcggcttaggtggtttggg 42293478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 51841485 - 51841437
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
    ||||||||| |||||| ||||||||||||| || |||||| ||||||||    
T  51841485 agagagagaattggggcagcacctatcgtaaaatagatggaagaaactc 51841437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 33083964 - 33084111
Alignment:
Q  98 taaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgac---ataagagagagagttggggt 194  Q
    |||| |||||| |||||| ||||| ||  ||  |||||||||||| |||| ||||||| ||||| ||||  ||||||   || |||||||||||||||||    
T  33083964 taaagtaagcgtagcagaaatgaggatgctgcgttggatgtgtgg-taagactagatgggatagaattagaaatgacgatattagagagagagttggggt 33084062  T
Q  195 agcacctatcgtagaaaagatggtagaaactctacttaaatggtttggg 243  Q
    ||||||||| |||||||||||||||||||||  |||||  |||||||||    
T  33084063 agcacctatggtagaaaagatggtagaaactagacttaggtggtttggg 33084111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 242
Target Start/End: Original strand, 14030681 - 14030859
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| ||||  ||||| ||||||||| |||| | |||||||||||| || |||   |||||| |||| |||| |||||   ||||||||||    
T  14030681 agtgttgggcggttaaaagtcaacacgagagtaaagtaagtgtagcagagatgaggatgttgcgatggatgagtggttaagactagacaggataggatta 14030780  T
Q  167 agaatga---cataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgg 242  Q
     ||||||   ||| ||||||| ||| |||||||||||||| ||||||||| ||||||| | |   ||||||||||||||    
T  14030781 ggaatgacaccattagagagatagtgggggtagcacctatagtagaaaagttggtagataataggcttaaatggtttgg 14030859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 28085271 - 28085409
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  28085271 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggattacgaatgacaccattagagag 28085369  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  28085370 agagtgggggtagcacctatagtagaaaagttggtagaaa 28085409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 21870363 - 21870300
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||||||||||| | ||||||||||||||||||||||  ||||  |||||||||||    
T  21870363 agagagttggggtagcacctgtagtagaaaagatggtagaaactcggcttaggtggtttgggca 21870300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 5258538 - 5258397
Alignment:
Q  86 ccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca----ta-aga 180  Q
    |||||| ||||| ||| |||| | ||| ||| ||||||| |||  ||||||| |||| |||| |||||  ||||||||||| ||||||||    || |||    
T  5258538 ccaacacgagagcaaagtaagtgtagcggaggtgagaatgttgcgttggatgagtgg-taagactagacaagataggattatgaatgacaccgttagaga 5258440  T
Q  181 gagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||| |||||||||||||| ||||||||| |||||||||    
T  5258439 gagagagtgggggtagcacctatagtagaaaagttggtagaaa 5258397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 9706671 - 9706809
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    ||||| ||||||||| |||| | ||| |||||||| || ||| | |||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  9706671 caacacgagagtaaagtaagtgtagcggagatgaggatgttgcactggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 9706769  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| | |||||||||||| ||||||||| |||||||||    
T  9706770 agagtggaggtagcacctattgtagaaaagttggtagaaa 9706809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 14389459 - 14389415
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaac 224  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  14389459 agagagagttgaggtagcacctatcgtagaaaagatggtggaaac 14389415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 6641703 - 6641656
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  6641703 agagatagagttggggtatcacctatagtagaaaagatggtagaaact 6641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 20427954 - 20427885
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  20427954 gataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 20427885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 32755909 - 32755954
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  32755909 agagagagagtgggggtagcacctatagtagaaaagttggtagaaa 32755954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 5631810 - 5631874
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgg 242  Q
    ||||||||||| |||||| ||||||| ||||||||| ||||||||| | | |||| |||||||||    
T  5631810 agagagagagtgggggtaacacctatagtagaaaagttggtagaaaatatgcttagatggtttgg 5631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 12134287 - 12134150
Alignment:
Q  88 aacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagaga 184  Q
    |||| |||| |||| |||||  ||||||||||||||| |||| ||||||||||||  ||| | |||||| |||| ||||  |||||||   | |||||||    
T  12134287 aacacgagaataaactaagcatagcagagatgagaatgttgtgttggatgtgtggc-aagacaagatgatatagaattagaaatgacaatattagagaga 12134189  T
Q  185 gagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    || ||| ||||  |||||| |||||||||||||| ||||    
T  12134188 gaattgaggtacgacctatagtagaaaagatggtggaaa 12134150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 12890575 - 12890639
Alignment:
Q  181 gagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  12890575 gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttacatggtttgggca 12890639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 31818433 - 31818511
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    |||||||||| ||||||||| | ||||||||||||||| ||| ||||||| ||| | ||||  ||||||||||| |||||    
T  31818433 caacatgagaataaaataagtgtagcagagatgagaatgttgcattggatatgt-gttaagattagatgagataagatta 31818511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 7513683 - 7513618
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||| |||||||||  ||||||||||||||||| ||  |||||  |||||||||||    
T  7513683 agagagagttcggggagcacctataatagaaaagatggtagaacctagacttaggtggtttgggca 7513618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 9594000 - 9593955
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| ||||||||||||||||  | |||||||||||||||||||    
T  9594000 agagagggagttggggtagcaccattagtagaaaagatggtagaaa 9593955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 30031244 - 30031289
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| |||| |||||||||||||| ||||||||| |||||||||    
T  30031244 agagagggagtgggggtagcacctatagtagaaaagttggtagaaa 30031289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 36136687 - 36136797
Alignment:
Q  115 agatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaa 211  Q
    |||||||||| |||| ||||||| |||| |||| ||||| | |||||| ||| ||||||||   | |||||||||||||||||||||||||| |||||||    
T  36136687 agatgagaatgttgtgttggatgggtgg-taagactagaagggataggtttaggaatgacaccattagagagagagttggggtagcacctatagtagaaa 36136785  T
Q  212 agatggtagaaa 223  Q
    ||||||||||||    
T  36136786 agatggtagaaa 36136797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 36514499 - 36514434
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||  |||||||||||    
T  36514499 agagagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggca 36514434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 37617862 - 37617977
Alignment:
Q  110 agcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgt 206  Q
    |||||||||||| || |||  ||||||| |||| |||| |||||  ||||||||||| ||||||||   | ||||||||||| |||||||||||||| ||    
T  37617862 agcagagatgaggatgttgcgttggatgagtgg-taagactagacaagataggattaggaatgacaccattagagagagagtgggggtagcacctatagt 37617960  T
Q  207 agaaaagatggtagaaa 223  Q
    ||||||| |||||||||    
T  37617961 agaaaagttggtagaaa 37617977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 19262725 - 19262680
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  19262725 agagagagttggggtagcacctattgtagaaaagatggtagaaact 19262680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 33072849 - 33072985
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataag-agagag 185  Q
    |||||||||| | ||||||| | |||||||||||  || |||  ||||||| |||| |||| |||||  ||||||||||| ||||||||  |  ||||||    
T  33072849 caacatgagaatcaaataagtgtagcagagatgatgatgttgcgttggatgagtgg-taagactagacaagataggattaggaatgacaccattagagag 33072947  T
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||| |||||||||||||| ||||||||| |||||||||    
T  33072948 agtgggggtagcacctatagtagaaaagttggtagaaa 33072985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 47848549 - 47848707
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || |||||||| |||| |||||||||   ||  |||||||| || |||| |||||||||||| |||| ||||| | |||||||| |    
T  47848549 agtgttgggtggttaagaaccaacacgagaataaaataagtctaggggagatgaggatgttgtgttggatgtgtgg-taagactagacgggataggatca 47848647  T
Q  167 agaatga---cataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
      | |||   ||| |||||||||||||||||||| ||||| |||||||||||||| ||||    
T  47848648 gaagtgataacattagagagagagttggggtagcgcctatagtagaaaagatggtggaaa 47848707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 12841662 - 12841502
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgac---ataagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||| ||||||| |||| |||  |||||   |||||||||| |||||||   || ||||||    
T  12841662 caacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtgg-taaaactagacatgataggattaggaatgaccccattagagag 12841564  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| | |||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  12841563 agagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 12841502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 33350193 - 33350033
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||||||||||||   | ||||||    
T  33350193 caacatgagaatcaagtaagtgtagcagagatgaggatgttgccttggatgagtgg-taagactagacatgataggattaagaatgacaccattagagag 33350095  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| ||||| |||||||| ||||||||| || |||||| |   |||| ||||||||||||    
T  33350094 agagtgggggttgcacctatagtagaaaagttgctagaaaataggcttagatggtttgggca 33350033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 34869315 - 34869475
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | || ||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  34869315 caacatgagaatcaagtaagtgtagtagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 34869413  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  34869414 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 34869475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 35906588 - 35906428
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  35906588 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacaggataggattaggaatgacaccattagagag 35906490  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| | |||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  35906489 agagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 35906428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 49029171 - 49029331
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || ||   ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  49029171 caacatgagaatcaagtaagtgtagcagagatgaggatgttacgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 49029269  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  49029270 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 49029331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 40830224 - 40830278
Alignment:
Q  191 gggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||||| | ||||||||||||||||||||||||||  |||||||||||    
T  40830224 gggtagcacctattgaagaaaagatggtagaaactctacttaggtggtttgggca 40830278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 45836868 - 45836729
Alignment:
Q  86 ccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagaga 182  Q
    |||||| |||||| || |||| ||||| |||||||| || |||   |||||| |||| ||||  ||||  ||||||||||| ||||||||   | |||||    
T  45836868 ccaacacgagagtcaagtaagtgcagcggagatgaggatgttgcgctggatgagtgg-taagagtagacaagataggattaggaatgacaccattagaga 45836770  T
Q  183 gagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| |||||||||||||| ||||||||| |||||||||    
T  45836769 gagagtgggggtagcacctatagtagaaaagttggtagaaa 45836729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 13859326 - 13859235
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  13859326 gataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 13859235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 31005118 - 31005256
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| |||| |||   | ||||||    
T  31005118 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacaggataggattaggaataacaccattagagag 31005216  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  31005217 agagtgggggtagcacctatagtagaaaagttggtagaaa 31005256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 39811855 - 39811985
Alignment:
Q  90 catgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagaga 186  Q
    ||||||| ||||| ||||| ||| || ||||| || |||  |||||||||||| |||| ||||| | ||||||||||  |||||||   | |||||||||    
T  39811855 catgagaataaaacaagcgtagcggatatgaggatgttgctttggatgtgtgg-taagactagacgtgataggattagaaatgacaacattagagagaga 39811953  T
Q  187 gttggggtagcacctatcgtagaaaagatggt 218  Q
    ||||||| |||||||||| ||||||| |||||    
T  39811954 gttggggcagcacctatcatagaaaaaatggt 39811985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 45558352 - 45558413
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttg 241  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||| |||||  |||||||    
T  45558352 agagagagttggggtaccacctatagtagaaaagttggtagaaactcgacttaggtggtttg 45558413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 28020947 - 28021019
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||| ||||||   ||||  |||||||||||    
T  28020947 acattagagaaagagttggggtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggca 28021019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 38920789 - 38920849
Alignment:
Q  185 gagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||||||||||| |||||||||||||| ||||||   ||||| |||||||||||    
T  38920789 gagttggggtagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgggca 38920849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 7189518 - 7189475
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  7189518 agagagagttggggtcgcacctatagtagaaaagatggtagaaa 7189475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 6374833 - 6374901
Alignment:
Q  158 ataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  6374833 ataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 6374901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 1523812 - 1523853
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggta 219  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  1523812 agagagagagttgaggtagcacctatcgtaaaaaagatggta 1523853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 5335910 - 5335975
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||||||||||| |||| |||| ||||||||| ||||||  |||||  |||||||||||    
T  5335910 agagagagttggggtagcatctatagtaggaaagatggtcgaaactagacttaggtggtttgggca 5335975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 11593855 - 11593993
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataa---gagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||| ||||| ||||||||  |   |||||    
T  11593855 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacaggataagattaggaatgacaccatttgagag 11593953  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  11593954 agagtgggggtagcacctatagtagaaaagttggtagaaa 11593993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 38616867 - 38616908
Alignment:
Q  196 gcacctatcgtagaaaagatggtagaaactctacttaaatgg 237  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  38616867 gcacctatcatagaaaagatggtagaaactcaacttaaatgg 38616908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 48736191 - 48736146
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||    
T  48736191 agagagagttggggtagcacctacagtagaaaagatgggagaaact 48736146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 2886013 - 2885949
Alignment:
Q  181 gagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  2886013 gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 2885949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 27021986 - 27021946
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggt 218  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  27021986 agagagagagttggggtagcacctatagtagaaaagttggt 27021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 32630583 - 32630627
Alignment:
Q  179 gagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||| |||||||||||||| ||||||||| |||||||||    
T  32630583 gagagagagtgggggtagcacctatagtagaaaagttggtagaaa 32630627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 46989891 - 46989931
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggt 218  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  46989891 agagatagagttggggtagcacctattgtagaaaagatggt 46989931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 29653669 - 29653626
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||    
T  29653669 actattaagaaagatctagagattaatgagttagatagaaatat 29653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 30144934 - 30144977
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||    
T  30144934 actattaagaaagatctagagattaatgagttggatagggatat 30144977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 37439640 - 37439597
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatg 216  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||    
T  37439640 acattagagagagagttggagtagcacctatggtagaaaagatg 37439597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 39906688 - 39906619
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||| ||||||||   | |||||||||||  ||||||||||||| ||||||||| |||||||||    
T  39906688 gataggattaggaatgacaccattagagagagagtgagggtagcacctatagtagaaaagttggtagaaa 39906619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 40139071 - 40139028
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||    
T  40139071 actattaagaaagatctagagattaatgcgtttgatagaaatat 40139028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 43281664 - 43281707
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||    
T  43281664 agagagagtgggggtagcacctatagtagaaaagttggtagaaa 43281707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 43282396 - 43282431
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaag 213  Q
    |||||||||||||||||||||||||| |||||||||    
T  43282396 agagagagagttggggtagcacctatagtagaaaag 43282431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 46356174 - 46356105
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||| ||||||||   | ||||||||| | |||||||||||||| ||||||||| |||||||||    
T  46356174 gataggattaggaatgacaccatcagagagagaatgggggtagcacctatagtagaaaagttggtagaaa 46356105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 28858037 - 28858099
Alignment:
Q  183 gagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||| |||||||| |||||||| ||||||||||||| | |||  |||||||||||    
T  28858037 gagagatggggtggcacctattgtagaaaacatggtagaaactcaagttaggtggtttgggca 28858099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 30632958 - 30633023
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||| ||||||||||||||| || |||| ||||| ||| |||  |||| ||||||||||||    
T  30632958 agagagagtcggggtagcacctatcataaaaaaaatggtggaagctcggcttagatggtttgggca 30633023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 30914755 - 30914714
Alignment:
Q  185 gagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  30914755 gagttggggtagtacctattgtagaaaaaatggtagaaactc 30914714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 44855490 - 44855399
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||   | ||||||||||| ||| ||| |||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  44855490 gataggattaggaatgacaccattagagagagagtggggatagtacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 44855399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 46014474 - 46014429
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| ||||| |||||||| ||||||||| |||||||||    
T  46014474 agagagagagtgggggttgcacctatagtagaaaagttggtagaaa 46014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 28858204 - 28858248
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatatt 322  Q
    |||||||||||||| |||||||||||| |||| |||||| |||||    
T  28858204 actattaagaaagatctagagattaataagttggatagaaatatt 28858248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 30200083 - 30200051
Alignment:
Q  282 ttaagaaagacctagagattaatgagtttgata 314  Q
    |||||||||| ||||||||||||||||||||||    
T  30200083 ttaagaaagatctagagattaatgagtttgata 30200051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 41070057 - 41070121
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggc 244  Q
    ||||||||| ||||| |||| |||||||||||||||| | ||| ||| |||||  ||||||||||    
T  41070057 agagagagtcggggtcgcacttatcgtagaaaagatgcttgaatctcgacttaggtggtttgggc 41070121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 42177309 - 42177269
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggt 218  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  42177309 agagagagagttgaggtatcacctatagtagaaaagatggt 42177269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 8180675 - 8180835
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||| ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  8180675 caacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 8180773  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  8180774 agagtgggggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttgggca 8180835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 36183346 - 36183484
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataa---gagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| |||||||| ||   |||||    
T  36183346 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggattaggaatgacacaattagagag 36183444  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  36183445 agagtaggggtagcacctatagtagaaaagttggtagaaa 36183484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 38429759 - 38429917
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || |||||||| ||||||| | |||| | ||| |||||||| || |||  ||||||| |||| |||| |||||   ||||||||||    
T  38429759 agtgttgggcggttaagaaccaacacgagagtagagtaagtgtagcggagatgaggatgttgcgttggatgagtgg-taagactagacatgataggatta 38429857  T
Q  167 agaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
     ||||||||   | ||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  38429858 ggaatgacaccattagagagagagtgggggcagcacctatagtagaaaagttggtagaaa 38429917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 223
Target Start/End: Complemental strand, 41763448 - 41763291
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || |||||||| ||||||||| |||| | ||| |||||||| || |||   |||||| |||| |||| |||||  |||||||||||    
T  41763448 agtgttgggcggttaagaaccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgatggatgagtgg-taagactagacaagataggatta 41763350  T
Q  167 agaatga---cataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
     ||||||   ||| |||||||||| ||||||| ||||||| ||||||||| |||||||||    
T  41763349 ggaatgacaccattagagagagag-tggggtaacacctatagtagaaaagttggtagaaa 41763291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 12026128 - 12026072
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatattacaaaatattat 334  Q
    |||||||||||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  12026128 actattaagaaagatctagagattaatgagtttgatagaaatatgataaaatattat 12026072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 4598856 - 4598809
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  4598856 agagagagagttggggtagcacctatagtagtaaagatggtagaaact 4598809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 7292864 - 7293012
Alignment:
Q  68 gtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaa 167  Q
    |||||||| ||| || |||||||||||   ||||||||||| || ||| || ||||| |||| ||||||| || | || | ||||||||||||  ||||     
T  7292864 gtgttgggtggtgaagaaccaacatgaacataaaataagcgtagtagaaataagaatgttgtgttggatgagttg-tatgactagatgagatacaattag 7292962  T
Q  168 gaatgac-ataagagagagagttggggtagcacctatcgtagaaaagatg 216  Q
     |||||| | |||| |||||| ||||||||||||||| ||||||||||||    
T  7292963 aaatgacgacaagaaagagagctggggtagcacctatagtagaaaagatg 7293012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 43752241 - 43752196
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||    
T  43752241 agagagagagttggggtagcacctatagtagaaaaggtggtagaaa 43752196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 23714654 - 23714508
Alignment:
Q  78 gtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgac-at 176  Q
    ||||| |||||||| || | |||| |||||  ||||||||| ||||| |||| |||||||||| |||||| |||||  | |||||||||| |||||| |     
T  23714654 gtaaagaaccaacacgaaaataaattaagcatagcagagattagaatgttgtgttggatgtgt-ggtaagactagacaaaataggattaaaaatgacgac 23714556  T
Q  177 aagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |  ||| |||||| ||||||||| ||| |||||||||||||| ||||||    
T  23714555 attagatagagtt-gggtagcacatatagtagaaaagatggtggaaact 23714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 24102326 - 24102180
Alignment:
Q  78 gtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgac-at 176  Q
    ||||| |||||||| || | |||| |||||  ||||||||| ||||| |||| |||||||||| |||||| |||||  | |||||||||| |||||| |     
T  24102326 gtaaagaaccaacacgaaaataaattaagcatagcagagattagaatgttgtgttggatgtgt-ggtaagactagacaaaataggattaaaaatgacgac 24102228  T
Q  177 aagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |  ||| |||||| ||||||||| ||| |||||||||||||| ||||||    
T  24102227 attagatagagtt-gggtagcacatatagtagaaaagatggtggaaact 24102180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 38434934 - 38434986
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  38434934 acattagagagagaattggggtagcacctatagtagaaaagatggtggaaact 38434986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 11017272 - 11017367
Alignment:
Q  149 ctagatgagataggattaagaatgaca-taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttggg 243  Q
    |||||||||||| ||||| |||||| | ||  | ||||||||| |||||||||||| ||||||||||| || |||||||  ||||| |||||||||    
T  11017272 ctagatgagataagattaggaatgaaaatattaaagagagttgaggtagcacctatagtagaaaagatcgtggaaactcggcttaagtggtttggg 11017367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 11412704 - 11412754
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  11412704 acattagagagagagttggggtagcacctatagtagaaaatatggtggaaa 11412754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 4807584 - 4807629
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  4807584 agagagagagtgggggtagcacctatagtagaaaagttggtagaaa 4807629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 25834669 - 25834714
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  25834669 agagagagagtgggggtagcacctatagtagaaaagttggtagaaa 25834714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 42092507 - 42092552
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||    
T  42092507 agagagagttggggtagcgcctatactagaaaagatggtagaaact 42092552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 12905082 - 12905126
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaa 222  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||    
T  12905082 agagagagagttggggtagcacctatagcagaaaagattgtagaa 12905126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 18188771 - 18188835
Alignment:
Q  181 gagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||||||||||||| |  ||||||||||||| ||| ||| |||||  |||||||||||    
T  18188771 gagagagttggggtagcacctcttctagaaaagatggtggaagctcgacttaggtggtttgggca 18188835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 2610576 - 2610643
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||| |||||||||||||| || |||||| ||||||||| |   |||| ||||||||||||    
T  2610576 agagagagagtgggggtagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggca 2610643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 19337142 - 19337099
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||    
T  19337142 agagagagttggggtagcacctatagtagtaaagatggtggaaa 19337099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 38452979 - 38452912
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||| ||||||||| |||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  38452979 agagagagagtgggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttgggca 38452912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 45367957 - 45367874
Alignment:
Q  142 ggtaaggctagatgagataggattaagaatgacataag-agagagagttgggg-tagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| |||||  ||||||||||||||||||||  |  ||||||||| |||| |||||||||| ||||||||| |||||||||    
T  45367957 ggtaagactagacaagataggattaagaatgacaccattagagagagtggggggtagcacctatagtagaaaagttggtagaaa 45367874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 1456224 - 1456266
Alignment:
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
    |||||| |||||||||||||| ||||||||||||| |||||||    
T  1456224 agagttagggtagcacctatcctagaaaagatggtggaaactc 1456266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 12141539 - 12141577
Alignment:
Q  185 gagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  12141539 gagttggggtagcacctatagtagaaaagatggtggaaa 12141577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 36819165 - 36819207
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaa 222  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||    
T  36819165 agagaaagttgggttagcacctatcgtagaaaagacggtagaa 36819207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 227310 - 227355
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| | |||||||    
T  227310 agagagagagtgggggtagcacctatggtagaaaagtttgtagaaa 227355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 3865967 - 3866105
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataa---gagag 183  Q
    |||||||||| | || |||| | |||||||||||  || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||  |   |||||    
T  3865967 caacatgagaatcaagtaagtgtagcagagatgatgatgttgcgttggatgagtgg-taagactagacatgataggattaggaatgacaccattggagag 3866065  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||| ||||| |||||||||    
T  3866066 agagtgggggtagcacctatagtaaaaaagttggtagaaa 3866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 18958903 - 18958940
Alignment:
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  18958903 agttggggtagcacctatagtagaaaagatggtggaaa 18958940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 28908549 - 28908492
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaat 124  Q
    ||||||||| |||||| ||||| || |||||||||||||| | ||| |||||||||||    
T  28908549 agtgttgggtggtaaagaaccagcacgagagtaaaataagtgtagcggagatgagaat 28908492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 11006866 - 11006902
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgata 314  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  11006866 actattaagaaagacctagagattaatgggttggata 11006902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 82596 - 82754
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || | ||||||||||| | || |||| ||||| |||||||| || ||| | |||||| || | |||| |||||   ||||||||||    
T  82596 agtgttgggcggttaagagccaacatgagaatcaagtaagtgcagcggagatgaggatgttgcactggatgagtag-taagactagacatgataggatta 82694  T
Q  167 agaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  82695 agaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 82754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 9599765 - 9599643
Alignment:
Q  103 taagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataa---gagagagagttggggtagcac 199  Q
    |||||| |||||||||||| || |||| ||||||| |||| |||| ||||| | |||| ||||| ||||||||| |   ||||||||||||| ||| |||    
T  9599765 taagcgtagcagagatgaggatgttgtgttggatgagtgg-taagactagacgggatatgattaggaatgacatcattagagagagagttggagtaacac 9599667  T
Q  200 ctatcgtagaaaagatggtagaaa 223  Q
    |||| |||||||||||||||||||    
T  9599666 ctatagtagaaaagatggtagaaa 9599643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 19936397 - 19936547
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || ||||||||||||| | ||||||||  ||| ||||||||||| |||| ||||||| || |||||| ||||||| ||||||| ||    
T  19936397 agtgttgggcggttaagaaccaacatgagaatcaaataagcatagcggagatgagaatgttgtgttggatgagt-ggtaagactagatgggataggaata 19936495  T
Q  167 agaatgacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
     |||||||     |  ||||||| ||||||||||||| | | |||||||||||||||    
T  19936496 ggaatgac-----accgagagttagggtagcacctatagcaaaaaagatggtagaaa 19936547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 1210640 - 1210800
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  1210640 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacaggataggattaggaatgacaccattagagag 1210738  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  1210739 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 1210800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 696144 - 696302
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || | |||||| ||||||||| |||| | ||| |||||||| || |||   |||||| |||| |||| |||||   ||||||||||    
T  696144 agtgttgggtggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtgg-taagactagacaggataggatta 696242  T
Q  167 agaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
     ||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  696243 ggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 696302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 1661304 - 1661463
Alignment:
Q  70 gttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaa-- 167  Q
    |||||| ||| ||||||||||| |||| ||||||||||  |||||||||||  || |||| ||| |||| ||  |||| ||||||| ||||||||||       
T  1661304 gttgggcggtgaaaaaccaacacgagaataaaataagcatagcagagatgaagatgttgtgttgaatgtctga-taagactagatgtgataggattagaa 1661402  T
Q  168 --gaatgacataa---gagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
      ||||||||  |   ||||||||||||||||||||||||| |||||||||||||| ||||    
T  1661403 atgaatgacaatatttgagagagagttggggtagcacctatagtagaaaagatggtggaaa 1661463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 8391667 - 8391805
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    ||||| ||||||||| |||| | ||| |||||||  || |||| ||||||| |||| |||| ||| |  ||||||||||| ||||||||   | ||||||    
T  8391667 caacacgagagtaaagtaagtgtagcggagatgaagatgttgtgttggatgagtgg-taagactacacaagataggattaggaatgacaccattagagag 8391765  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  8391766 agagtgggggtagcacctatagtagaaaagttggtagaaa 8391805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 9592609 - 9592767
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || || |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   ||||||||||    
T  9592609 agtgttgggcggttaagaatcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggatta 9592707  T
Q  167 agaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
     ||||||||   | ||||||||||| |||||||||||||| ||||||||| | |||||||    
T  9592708 ggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagtttgtagaaa 9592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 15085809 - 15085967
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| || | |||||| ||||||||| |||| | ||| |||||||| || |||   |||| | |||| |||| ||||||  ||||||||||    
T  15085809 agtgttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggacgagtgg-taagactagataggataggatta 15085907  T
Q  167 agaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
     ||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  15085908 ggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 15085967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 3819151 - 3819083
Alignment:
Q  177 aagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||||| |||||||||||| |||||||||||||| | ||||  |||||| |||||||||||    
T  3819151 aagagagagagttgaggtagcacctatggtagaaaagatggtggtaactagacttaagtggtttgggca 3819083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 39140469 - 39140547
Alignment:
Q  142 ggtaaggctagatgagataggattaagaatga---cataagagagagagttggggtagcacctatcgtagaaaagatgg 217  Q
    |||||| |||||||||||||||||| ||||||   ||| | |||||||||||| ||||||||||| |||||||||||||    
T  39140469 ggtaagactagatgagataggattaggaatgaaaccattacagagagagttggcgtagcacctatagtagaaaagatgg 39140547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 225
Target Start/End: Original strand, 26016312 - 26016472
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| |||||| |||||||| ||   |||| |||||| |||||||||||| || |||  |||||||||||| |||| |||||   ||||  ||||    
T  26016312 agtgttgggcggtaaagaaccaacaagaacataaagtaagcgtagcagagatgaggatgttgcgttggatgtgtgg-taagactagacaggatataatta 26016410  T
Q  167 ---agaatgacataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
       | |||| ||| |||||||||||||||||| |||||||   |||||||||||||||||||    
T  26016411 taaataatggcattagagagagagttggggtaacacctatatgagaaaagatggtagaaact 26016472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 40419514 - 40419694
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| |||||| |||||||| ||   |||| |||| | |||||||||||| ||  ||  ||| |||| ||| |||  ||||||||||||| ||||    
T  40419514 agtgttgggtggtaaagaaccaacacgaacataaagtaagtgtagcagagatgaggatggtgcgttgaatgtatgg-taaaactagatgagatagaatta 40419612  T
Q  167 agaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
      |||||||   | ||||||||||||||||||| || ||| |||||| ||||||||| ||||  |||||| |||||||||||    
T  40419613 gaaatgacaacattagagagagagttggggtagaacttatagtagaatagatggtagtaactagacttaagtggtttgggca 40419694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 22089989 - 22090151
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca----ta-agag 181  Q
    |||||||||| | || |||| | |||||||||||| ||  ||| ||||||| |||| |||| |||||   |||||||||| ||||||||    || ||||    
T  22089989 caacatgagaatcaagtaagtgtagcagagatgaggatgctgtgttggatgagtgg-taagactagacaggataggattatgaatgacaccattagagag 22090087  T
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  22090088 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 22090151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 2544587 - 2544632
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||    
T  2544587 agagagagagttggggtagcacctatagtagaaaagatggtggaaa 2544632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 9509306 - 9509347
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggta 219  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  9509306 agagagagagttggggtagcacctatagtagaaaagatggta 9509347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 30202517 - 30202379
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  30202517 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 30202419  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||| | |||||||||    
T  30202418 agagtgggggtagcacctatagtagaaaggttggtagaaa 30202379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 34792667 - 34792576
Alignment:
Q  157 gataggattaagaatga---cataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||   ||| ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  34792667 gataggattaggaatgaaaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggca 34792576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 37263325 - 37263386
Alignment:
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||||||||||| ||||||||||| |||||||||  |||| | |||||||||||    
T  37263325 agagttggggtagcacctatagtagaaaagatagtagaaactagacttcagtggtttgggca 37263386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 43423702 - 43423754
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  43423702 acattagagagagagttggggtaacacctatagtagaaaagatggtggaaact 43423754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 110 - 245
Target Start/End: Complemental strand, 51441129 - 51440992
Alignment:
Q  110 agcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgt 206  Q
    |||||||||||| || ||| |||||| | |||| |||| |||||   |||||||||| ||||||||   | ||||||||||| |||||| ||||||| ||    
T  51441129 agcagagatgaggatgttgcattggacgagtgg-taagactagacatgataggattaggaatgacaccattagagagagagtgggggtaacacctatagt 51441031  T
Q  207 agaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| ||||||||| |   |||| ||||||||||||    
T  51441030 agaaaagttggtagaaaataggcttagatggtttgggca 51440992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 8671815 - 8671973
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataag-agagag 185  Q
    |||||||||| | || |||| | ||||||||| || || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||  |  ||||||    
T  8671815 caacatgagaatcaagtaagtgtagcagagataaggatgttgcgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 8671913  T
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  8671914 agtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 8671973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 4001772 - 4001704
Alignment:
Q  158 ataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  4001772 ataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 4001704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 40416359 - 40416405
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaac 224  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||    
T  40416359 agagagagagttggagtagcacctatagtagaaaagatggtggaaac 40416405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 27848099 - 27848054
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||    
T  27848099 agagagagagttgtggtagcacctgtggtagaaaagatggtagaaa 27848054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 32083039 - 32082994
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  32083039 agagagagagtgggggtagcacctatagtagaaaagttggtagaaa 32082994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 32231272 - 32231181
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||  ||||||||| |   |||| ||||||||||||    
T  32231272 gataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttgggca 32231181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 38868872 - 38868937
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||| ||||| |||||||||||| ||||||||||||| |||||||  ||||  |||||||||||    
T  38868872 agagagggttggagtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgggca 38868937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 52073753 - 52073716
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggta 219  Q
    |||||||||||||||||||||| |||||||||||||||    
T  52073753 agagagttggggtagcacctattgtagaaaagatggta 52073716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 12231523 - 12231567
Alignment:
Q  277 gactattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    ||||||||||||||| || |||||||||||||| |||||||||||    
T  12231523 gactattaagaaagatctcgagattaatgagttggatagagatat 12231567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 16943166 - 16943210
Alignment:
Q  181 gagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||    
T  16943166 gagagagttggggtagtacctatagtagaaaagatggtggaaact 16943210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 17143151 - 17143103
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
    |||| |||||||| |||||| ||||||||||||||||||||| ||||||    
T  17143151 agagtgagagttgcggtagcgcctatcgtagaaaagatggtacaaactc 17143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 37463165 - 37463122
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||||||||| ||||||||||  |||||||    
T  37463165 agagagagttggggtagcacctatagtagaaaagacagtagaaa 37463122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 38807965 - 38807898
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||| | |||||||||||||| ||||||||| ||||||||| |  ||||| ||||||| ||||    
T  38807965 agagagagaatgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttaggca 38807898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 51812513 - 51812560
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||||| || |||| |||||||||||||| ||||||    
T  51812513 agagagagagttggggtaacaactatagtagaaaagatggtggaaact 51812560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 6299512 - 6299478
Alignment:
Q  282 ttaagaaagacctagagattaatgagtttgataga 316  Q
    |||||||||| ||||||||||||||||||||||||    
T  6299512 ttaagaaagatctagagattaatgagtttgataga 6299478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 52561944 - 52561860
Alignment:
Q  142 ggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| ||||| | |||| ||||| ||||||||   | |||||||||||||||||||||||| | ||||||| |||| ||||||    
T  52561944 ggtaagactagacgggatatgattaggaatgacaccattagagagagagttggggtagcacctttagtagaaatgatgatagaaa 52561860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 13828009 - 13827964
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||| |||||| ||||||||| |||||||||||||| ||||||    
T  13828009 agagagatttggggcagcacctatagtagaaaagatggtggaaact 13827964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 18793280 - 18793235
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||| |||||||||| || ||| |||||||||||||||||||||    
T  18793280 agagagggttggggtaggacttattgtagaaaagatggtagaaact 18793235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 35828844 - 35828799
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||| | ||||||||||| |||||||||||||| ||||    
T  35828844 agagagagagtttgagtagcacctatggtagaaaagatggtggaaa 35828799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 36340097 - 36340052
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||| |||||||||||  ||||||||||||| ||||    
T  36340097 agagagagagttggtgtagcacctatattagaaaagatggtggaaa 36340052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 51602046 - 51602111
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||  ||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  51602046 agagagagtgagggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 51602111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 13579159 - 13579111
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactc 226  Q
    |||||||||||||||||||||  || ||| | |||||||||||||||||    
T  13579159 agagagagagttggggtagcatataccgtcggaaagatggtagaaactc 13579111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 17267995 - 17267943
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| ||||||||| ||||||||||| |||| ||||||||||| || ||||||    
T  17267995 acattagagagagatttggggtagcatctatagtagaaaagattgtggaaact 17267943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 39525775 - 39525807
Alignment:
Q  184 agagttggggtagcacctatcgtagaaaagatg 216  Q
    |||||||||||||||||||| ||||||||||||    
T  39525775 agagttggggtagcacctattgtagaaaagatg 39525807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 15489786 - 15489719
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||||||  |||| ||||||||||||    
T  15489786 agagagagagttggggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggca 15489719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 24178405 - 24178565
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| ||| |   |||||||||||||||||||   | ||||||    
T  24178405 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactatacatgataggattaagaatgacaccattagagag 24178503  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  24178504 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 24178565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 33667209 - 33667271
Alignment:
Q  183 gagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||  |||||||||||    
T  33667209 gagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggca 33667271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 31636212 - 31636147
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||  |||||  |||||||||||    
T  31636212 agagaaagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggca 31636147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 14749267 - 14749359
Alignment:
Q  153 atgagataggattaagaatga---cataagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgg 242  Q
    ||||||||||||||  |||||   ||| |||||||||||||| ||||||||||| ||||||||  |||||||||||  ||||| |||||||||    
T  14749267 atgagataggattagaaatgaaaacattagagagagagttggtgtagcacctatagtagaaaaattggtagaaactagacttagatggtttgg 14749359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 219826 - 219700
Alignment:
Q  101 aataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataa---gagagagagttggggtagc 197  Q
    |||||||| |||| |||||||||| |||  ||||||| |||  |||| | ||| |||||| ||||| ||||||||  |   |||||||||||||||||||    
T  219826 aataagcgtagcaaagatgagaatgttgcgttggatgcgtgt-taagacaagacgagataagattacgaatgacaacattggagagagagttggggtagc 219728  T
Q  198 acctatcgtagaaaagatggtagaaact 225  Q
    ||||||||| |||||| |||| ||||||    
T  219727 acctatcgttgaaaaggtggtggaaact 219700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 4496348 - 4496439
Alignment:
Q  157 gataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  4496348 gataggattaggaatgacacctttagagagagagtgggggtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggca 4496439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 14667751 - 14667796
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||    
T  14667751 agagagagagttggggtagcacctatagtagaaaagatggtggaaa 14667796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 28977244 - 28977108
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataag-agagag 185  Q
    |||||||||| | || |||| | |||||||||||| || |||| ||||||| |||| |||  |||||   |||||||||| ||||||||  |  ||||||    
T  28977244 caacatgagaatcaagtaagtgtagcagagatgagtatgttgtgttggatgagtgg-taaaactagaaatgataggattaggaatgacaccattagagag 28977146  T
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||| |||||||||||||| ||||||||| |||||||||    
T  28977145 agtgggggtagcacctatagtagaaaagttggtagaaa 28977108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 418279 - 418236
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  418279 agagagagttggggtagcacctatggtagaaaagatggcagaaa 418236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 1275160 - 1275319
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||||  |||||||||||| || |||  ||||||| |||| |||| |||||   | |||||||| ||||||||   | ||||||    
T  1275160 caacatgagaatcaagtaagcatagcagagatgaggatgttgcgttggatgagtgg-taagactagacatggtaggattaggaatgacaccattagagag 1275258  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  1275259 agagt-ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 1275319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 1287873 - 1287806
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  1287873 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 1287806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 4460365 - 4460404
Alignment:
Q  277 gactattaagaaagacctagagattaatgagtttgataga 316  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  4460365 gactattaagaaagacctagagattaatgagttggataga 4460404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 28005694 - 28005737
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  28005694 actattaagaaagatctagagattaatgagtttgatagggatat 28005737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 5848462 - 5848408
Alignment:
Q  88 aacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgg 142  Q
    ||||||||||||||||||| | |||||||||||| || ||| |||||||||||||    
T  5848462 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtgg 5848408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 28186898 - 28186832
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatattacaaaatattatggcttcgttt 344  Q
    ||||||||||||||  |||||||||||||||| ||||||||||| | | || |||||||| ||||||    
T  28186898 actattaagaaagatttagagattaatgagttggatagagatatgatagaacattatggcgtcgttt 28186832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 38684932 - 38685000
Alignment:
Q  158 ataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  38684932 ataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 38685000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 79501 - 79546
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||    
T  79501 agagagagagttggggtagtacctatagtagaaaagatggtggaaa 79546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 10083023 - 10082966
Alignment:
Q  188 ttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||| ||||||| |||||||||||||||||||||  |||||| |||||| ||||    
T  10083023 ttggggtatcacctatagtagaaaagatggtagaaactagacttaagtggtttcggca 10082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 11002715 - 11002650
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||||||  |||||||| ||||||||||||  |||||  |||||||||||    
T  11002715 agagagagttcgggtagcacctacagtagaaaacatggtagaaactagacttaggtggtttgggca 11002650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 15168749 - 15168825
Alignment:
Q  150 tagatgagataggattaagaatgaca-taagagagagagtt--ggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||| |||||||||||||||||||||  |  |||| |||||  |||||||||||||| |||||||||||||||||||    
T  15168749 tagacgagataggattaagaatgacaccattagagggagttggggggtagcacctatagtagaaaagatggtagaaa 15168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 9234944 - 9235051
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||  |||||||||| ||||  ||| ||||||||||  ||||||||||  ||| ||| ||||||||||| |||||| ||||| | ||||||||||    
T  9234944 agtgttggatggtaaaaaactaacacaagaataaaataagctgagcagagatggaaatgttgcattggatgtgt-ggtaagactagacgggataggatta 9235042  T
Q  167 agaatgaca 175  Q
      |||||||    
T  9235043 taaatgaca 9235051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 2075861 - 2075725
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| || | |||| |||||  ||||||||||| ||||||||   | ||||||    
T  2075861 caacatgagaattaagtaagtgtagcagagatgaggatgttgcgttggatgagttg-taagactagacaagataggattaggaatgacaacattagagag 2075763  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtaga 221  Q
    ||||| |||||| ||||||  ||||||||| |||||||    
T  2075762 agagtgggggtaacacctacagtagaaaagttggtaga 2075725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 2712936 - 2712999
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||||||||||||| ||  ||||||||||||| |||  |||||  |||||||||||    
T  2712936 agagagttggggtagcacctatagtctaaaagatggtagagactagacttaggtggtttgggca 2712999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 15370081 - 15370030
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaa 233  Q
    |||||||||||||| |||| || ||| ||||||||||||||||| |||||||    
T  15370081 agagagttggggtaacaccaatagtataaaagatggtagaaactatacttaa 15370030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 15588838 - 15588787
Alignment:
Q  174 cataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    ||||||||||| ||||||||||| |||||| | |||||||||||| ||||||    
T  15588838 cataagagagaaagttggggtagtacctatagaagaaaagatggtggaaact 15588787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 18351194 - 18351135
Alignment:
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||||||||||| |||||||| ||||||||||||   ||||  |||||||||||    
T  18351194 agttggggtagcacctatagtagaaaatatggtagaaactaggcttaggtggtttgggca 18351135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 34273015 - 34273082
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||| |   |||| ||||||||||||    
T  34273015 agagagagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttgggca 34273082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 16347766 - 16347627
Alignment:
Q  86 ccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatga---cataagaga 182  Q
    |||||| |||||| || |||| | ||| |||||||| || |||  ||||||| |||| |||| |||||  | ||| |||||| |||||   ||| |||||    
T  16347766 ccaacacgagagttaagtaagtgtagcggagatgaggatgttgcgttggatgagtgg-taagactagacaatatatgattaaaaatgaaaccattagaga 16347668  T
Q  183 gagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||  |||||||||||||| ||||||||| |||||||||    
T  16347667 gagagcgggggtagcacctatagtagaaaagttggtagaaa 16347627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 1174590 - 1174635
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||||||| || | || |||||||||||||||||||||    
T  1174590 agagagagttggggtaacagccatagtagaaaagatggtagaaact 1174635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 11729085 - 11729142
Alignment:
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttg 241  Q
    |||||||||| | ||| ||| |||||||||||||||||||||| |||||  |||||||    
T  11729085 agagttggggcaacacttattgtagaaaagatggtagaaactcaacttatgtggtttg 11729142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 28245312 - 28245492
Alignment:
Q  67 agtgttggggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggatta 166  Q
    ||||||||| ||| ||||  |||||||||| | || |||| | |||| ||||||| || |||  ||||||| |||| |||| ||||    ||||||||||    
T  28245312 agtgttgggcggttaaaagtcaacatgagaattaagtaagtgtagcaaagatgaggatgttgcgttggatgagtgg-taagactagcctggataggatta 28245410  T
Q  167 agaatgacataa---gagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
     ||||||||| |   |||||||||| |||||||||||||| ||||||||| ||||||||| |  ||||| ||||||||||||    
T  28245411 ggaatgacatcattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttgggca 28245492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 54128272 - 54128411
Alignment:
Q  86 ccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagaga 182  Q
    ||||||||||| | || |||||  |||||||||||| || |||  || |||| |||| |||  ||||| | |||||||||| ||||||||   | |||||    
T  54128272 ccaacatgagaatcaagtaagcttagcagagatgaggatgttgcgtttgatgagtgg-taaaactagacgcgataggattatgaatgacaccattagaga 54128370  T
Q  183 gagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||| ||||||||||||||||| |||||||||||||||||||    
T  54128371 gagtgttggggtagcacctatagtagaaaagatggtagaaa 54128411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 3987036 - 3987100
Alignment:
Q  179 gagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttggg 243  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||  |||||  |||||||||    
T  3987036 gagagagagttggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttggg 3987100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 34719364 - 34719312
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctactta 232  Q
    ||||||||||||||||||||||||||||||||||||||| |||| || |||||    
T  34719364 agagagagttggggtagcacctatcgtagaaaagatggtggaaagtcaactta 34719312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 52138718 - 52138855
Alignment:
Q  110 agcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgt 206  Q
    |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||||||| |||||||||||||| ||    
T  52138718 agcagagatgaggatgttgcgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagagagagtgggggtagcacctatagt 52138816  T
Q  207 agaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| ||||||||| |   |||| ||||||||||||    
T  52138817 agaaaagttggtagaaaataggcttagatggtttgggca 52138855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 345044 - 344960
Alignment:
Q  142 ggtaaggctagatgagataggattaagaatga---cataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| ||||| ||||||||||||  |||||   ||| |||||||||||||||||||||| ||| |||||||||||| ||||||    
T  345044 ggtaagactagacgagataggattagaaatgatgacattagagagagagttggggtagcacttatagtagaaaagatgttagaaa 344960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 27917483 - 27917600
Alignment:
Q  103 taagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataag-agagagagttggggtagcacct 201  Q
    |||||| |||||||||||| || |||| ||||||| |||| |||| ||||| |||||  ||||| |||||||   |  ||||| ||||||||||||||||    
T  27917483 taagcgtagcagagatgaggatgttgtgttggatgagtgg-taagcctagacgagatttgattaggaatgaccccattagagaaagttggggtagcacct 27917581  T
Q  202 atcgtagaaaagatggtag 220  Q
    || ||||||||||||||||    
T  27917582 atagtagaaaagatggtag 27917600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 49503887 - 49503803
Alignment:
Q  142 ggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| ||||| |||||||||||  ||||||||   | ||||||||||||  |||||||||||| |||||||||||||||||||    
T  49503887 ggtaagactagacgagataggattgggaatgacaccattagagagagagttcaggtagcacctatagtagaaaagatggtagaaa 49503803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 50960922 - 50960882
Alignment:
Q  183 gagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  50960922 gagagttggggtagcacctatagtagaaaagatggtagaaa 50960882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 36820302 - 36820208
Alignment:
Q  131 ttggatgtgtgggtaaggctagatgagataggattaagaatgac-ataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||||||||||| |||| ||||| ||||||||||||  |||||| | |  ||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  36820302 ttggatgtgtgg-taagactagacgagataggattagaaatgacgacattagagagagttggggtagcacctatattagcaaagatggtggaaact 36820208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 43695078 - 43694992
Alignment:
Q  157 gataggattaagaatgacataagagagagagttgggg-tagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    |||||||||| ||||||||   |||||||||| |||| |||||||||| ||||||||| ||||||||| | | |||| ||||||||||||    
T  43695078 gataggattaggaatgaca---gagagagagtggggggtagcacctatagtagaaaagttggtagaaaatttgcttagatggtttgggca 43694992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 39600980 - 39600930
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| ||||    
T  39600980 acattagagagagagttggggtagtacctatagtagaaaagatggtggaaa 39600930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 54278969 - 54279053
Alignment:
Q  142 ggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||| |||||  |||||| |||| ||||||||   | ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  54278969 ggtaagactagacaagatagaattaggaatgacaccattagagagagagtaggggtagcacctatagtagaaaagttggtagaaa 54279053  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 22061 - 22106
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  22061 agagagagagtgggggtagcacctatagtagaaaagttggtagaaa 22106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 5168820 - 5168865
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  5168820 agagagagagtgggggtagcacctatggtagaaaagttggtagaaa 5168865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 33272415 - 33272249
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca----ta-agag 181  Q
    |||||||||| | || |||| | |||||||||||| || ||| |||||||| || |||||| |||||   |||||||||||||||||||    || ||||    
T  33272415 caacatgagaatcaagtaagtgtagcagagatgaggatgttgcattggatgagt-ggtaagactagacatgataggattaagaatgacaccattagagag 33272317  T
Q  182 agagagttggggtagcacc----tatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| |||||||||||    ||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  33272316 agagagtgggggtagcacctatatatagtagaaaagttggtagaaaataggcttagatggtttgggca 33272249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 35033134 - 35033179
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  35033134 agagagagagtgggggtagcacctatagtagaaaagttggtagaaa 35033179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 46431802 - 46431757
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatatta 323  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||||    
T  46431802 actattaaaaaagatctagagattaatgagttggatagagatatta 46431757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 51448096 - 51447959
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | |||||||||||| || |||  ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  51448096 caacatgagaatcaactaagtgtagcagagatgaggatgttgcgttggatgagtgg-taagactagacaggataggattaggaatgacaccattagagag 51447998  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| ||| |||||||||| ||||||||| |||||||||    
T  51447997 agagtaggg-tagcacctatagtagaaaagttggtagaaa 51447959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 25191274 - 25191429
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataag-agagag 185  Q
    ||||| ||||||||| |||| | |||||||||||| || |||   |||||| |||| |||| |||||   |||| ||||||||||||||| |  ||||||    
T  25191274 caacacgagagtaaagtaagtgtagcagagatgaggatgttgcgctggatgagtgg-taagactagacatgatatgattaagaatgacatcattagagag 25191372  T
Q  186 agttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgg 242  Q
    | | |||||||||||||| ||||||||  ||| ||||| |  ||||| |||||||||    
T  25191373 aatgggggtagcacctatagtagaaaaattggaagaaaatagacttagatggtttgg 25191429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 31337872 - 31337773
Alignment:
Q  126 ttgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagagagagttggggtagcacctatcgtagaaaagatggtagaa 222  Q
    |||| |||||||||||  |||| ||||||| ||||||||||| |||||||   | ||||||| ||||||| |||||||||| |||||||||||||| |||    
T  31337872 ttgtgttggatgtgtga-taagactagatgggataggattaa-aatgacagcattagagagaaagttggg-tagcacctatagtagaaaagatggttgaa 31337776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 50249367 - 50249419
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| |||||||||||||||||||| | ||| |||||||||||||| ||||||    
T  50249367 acattagagagagagttggggtagcgcgtatagtagaaaagatggtggaaact 50249419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 50632231 - 50632163
Alignment:
Q  74 gggggtaaaaaaccaacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgg 142  Q
    ||||||||| ||||||||||| | |||| |||||| || |||||||||||| |||| ||||||| ||||    
T  50632231 gggggtaaagaaccaacatgaaaataaattaagcgtagtagagatgagaattttgtgttggatgcgtgg 50632163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 26490309 - 26490348
Alignment:
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  26490309 agagttgaggtagcacctatagtagaaaagatggtagaaa 26490348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 29374921 - 29374976
Alignment:
Q  178 agagagagagttggggtagc-acctatcgtagaaaagatggtagaaactctactta 232  Q
    ||||| |||||||||||||| |||||| | |||||||||||||||||||| |||||    
T  29374921 agagatagagttggggtagccacctattggagaaaagatggtagaaactcgactta 29374976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 54485526 - 54485589
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttg 241  Q
    ||||||||||||| ||||||||| || |||||||||||||| ||| ||| | |||| |||||||    
T  54485526 agagagagagttgaggtagcacccattgtagaaaagatggttgaatctcaatttaagtggtttg 54485589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 19736984 - 19737030
Alignment:
Q  178 agagagagagttggggt-agcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||    
T  19736984 agagagagagttgggggcagcacctatagtagaaaagatggtagaaa 19737030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 19757887 - 19757933
Alignment:
Q  178 agagagagagttggggt-agcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||    
T  19757887 agagagagagttgggggcagcacctatagtagaaaagatggtagaaa 19757933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 21200540 - 21200603
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||| |||||||||||||||  |||||||||||||| ||||||  |||||  |||||||||||    
T  21200540 agagagaattggggtagcaccta--gtagaaaagatggtggaaactagacttaggtggtttgggca 21200603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 39535730 - 39535688
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaac 224  Q
    |||||||||||| | ||||||| ||||||||||||||||||||    
T  39535730 agagagttggggcaacacctatagtagaaaagatggtagaaac 39535688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 44395424 - 44395466
Alignment:
Q  190 ggggtagcacctatcgtagaaaagatggtagaaactctactta 232  Q
    |||||||||||||||||| |||||||||  |||||||||||||    
T  44395424 ggggtagcacctatcgtaaaaaagatggcggaaactctactta 44395466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 11581432 - 11581497
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttggg 243  Q
    |||||||||||| |||||| |||||   ||||||||||||||||||||  |||||  |||||||||    
T  11581432 agagagagagttagggtagaacctacaatagaaaagatggtagaaactagacttaggtggtttggg 11581497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 19676374 - 19676329
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||||||| ||||||||||||||||| ||| |||||||| ||||||    
T  19676374 agagagagtgttggggtagcacctatagtacaaaagatgatagaaa 19676329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 31208971 - 31209004
Alignment:
Q  183 gagagttggggtagcacctatcgtagaaaagatg 216  Q
    ||||||| ||||||||||||||||||||||||||    
T  31208971 gagagtttgggtagcacctatcgtagaaaagatg 31209004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 38060419 - 38060464
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||    
T  38060419 agagagagagtgggggtagcacctataatagaaaagttggtagaaa 38060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 38430840 - 38430881
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    |||| |||| |||||||||||| |||||||||||||||||||    
T  38430840 agagcgttgaggtagcacctatagtagaaaagatggtagaaa 38430881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 45728135 - 45728180
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||||||| |||||||||| ||| ||||||||| |||||||||    
T  45728135 agagagagagtgggggtagcacatatagtagaaaagttggtagaaa 45728180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 54365268 - 54365231
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatgg 217  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  54365268 agagagagttggggtagcacctatagtagaaaatatgg 54365231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 29475845 - 29475889
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgatagagatatt 322  Q
    |||||||||||||| ||||||||||||||||| ||| || |||||    
T  29475845 actattaagaaagatctagagattaatgagttggattgaaatatt 29475889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 31453229 - 31453185
Alignment:
Q  182 agagagttggggtagcacctatcgta-gaaaagatggtagaaact 225  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||    
T  31453229 agagagttggggcagcacctatagtaagaaaagatggtagaaact 31453185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 31454524 - 31454473
Alignment:
Q  173 acataagagagagagttggggtagcacctatcgtagaaaagatggtagaaact 225  Q
    |||| |||||||| |||||  |||||||||| |||||||||||||||||||||    
T  31454524 acattagagagagtgttggt-tagcacctatagtagaaaagatggtagaaact 31454473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 41452863 - 41452827
Alignment:
Q  278 actattaagaaagacctagagattaatgagtttgata 314  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  41452863 actattaagaaagatctagagattaatgagttggata 41452827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 42510387 - 42510324
Alignment:
Q  98 taaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagatagg 162  Q
    ||||||||||  |||||||||||| || ||| ||||||||||| |||||| ||||||| ||||||    
T  42510387 taaaataagcatagcagagatgaggatgttgcattggatgtgt-ggtaagactagatgggatagg 42510324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 45289387 - 45289340
Alignment:
Q  178 agagagagagttggggtagcacctat--cgtagaaaagatggtagaaa 223  Q
    ||||||||||||||||||||||||||   |||||||||||||| ||||    
T  45289387 agagagagagttggggtagcacctattcagtagaaaagatggtggaaa 45289340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 50632125 - 50632065
Alignment:
Q  182 agagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgg 242  Q
    ||||||||||||| |||| ||| ||||||||||  |||||||||  |||||| ||||||||    
T  50632125 agagagttggggttgcacatatagtagaaaagaatgtagaaactaaacttaagtggtttgg 50632065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 25832 - 25694
Alignment:
Q  87 caacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgaca---taagagag 183  Q
    |||||||||| | || |||| | ||||||||| || || |||| ||||||| |||| |||| |||||   |||||||||| ||||||||   | ||||||    
T  25832 caacatgagaatcaagtaagtgtagcagagattaggatgttgtgttggatgagtgg-taagactagacatgataggattaggaatgacaccattagagag 25734  T
Q  184 agagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||| |||||||||||||| ||||||||| |||||||||    
T  25733 agagtgggggtagcacctatagtagaaaagttggtagaaa 25694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 2425 - 2381
Alignment:
Q  277 gactattaagaaagacctagagattaatgagtttgatagagatat 321  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  2425 gactattaagaaagatctagagattaatgagtttgatagaaatat 2381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 31456 - 31523
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 245  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  31456 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 31523  T

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Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 217
Target Start/End: Complemental strand, 44257 - 44123
Alignment:
Q  88 aacatgagagtaaaataagcgcagcagagatgagaatattgtattggatgtgtgggtaaggctagatgagataggattaagaatgacataagaga----- 182  Q
    |||| |||| ||||||||||||||| |||||||| || |||  ||||||||| || |||| |||||||  |||| ||||| |||||||   || |         
T  44257 aacacgagaataaaataagcgcagcggagatgaggatgttgcgttggatgtgcgg-taagactagatggtatagtattaaaaatgacaattgacaatatt 44159  T
Q  183 -gagagttggggtagcacctatcgtagaaaagatgg 217  Q
     ||||||||||||||||||||| |||||||||||||    
T  44158 agagagttggggtagcacctatagtagaaaagatgg 44123  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 11890 - 11845
Alignment:
Q  178 agagagagagttggggtagcacctatcgtagaaaagatggtagaaa 223  Q
    ||||||| ||| |||||||||||||| ||||||||| |||||||||    
T  11890 agagagatagtgggggtagcacctatagtagaaaagttggtagaaa 11845  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 193847 - 193883
Alignment:
Q  180 agagagagttggggtagcacctatcgtagaaaagatg 216  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  193847 agagagagttggagtagcacctattgtagaaaagatg 193883  T

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