View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6973_low_62 (Length: 317)

Name: NF6973_low_62
Description: NF6973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6973_low_62
NF6973_low_62
[»] chr5 (19 HSPs)
chr5 (41-317)||(26450486-26450762)
chr5 (41-317)||(26437117-26437393)
chr5 (1-40)||(5876145-5876184)
chr5 (1-40)||(22359891-22359930)
chr5 (1-40)||(29414925-29414964)
chr5 (3-46)||(42150739-42150782)
chr5 (3-40)||(2156376-2156413)
chr5 (3-40)||(25894908-25894945)
chr5 (3-40)||(30041502-30041539)
chr5 (1-40)||(22313757-22313796)
chr5 (3-41)||(2957784-2957822)
chr5 (3-40)||(2966254-2966291)
chr5 (3-40)||(33794019-33794056)
chr5 (3-40)||(34357546-34357583)
chr5 (3-40)||(34359337-34359374)
chr5 (3-40)||(40821592-40821629)
chr5 (138-209)||(42122972-42123043)
chr5 (3-45)||(40958875-40958917)
chr5 (1-30)||(4973500-4973529)
[»] chr7 (26 HSPs)
chr7 (1-41)||(1941971-1942011)
chr7 (3-45)||(8142704-8142746)
chr7 (3-40)||(1378874-1378911)
chr7 (3-40)||(5050170-5050207)
chr7 (3-40)||(6021123-6021160)
chr7 (3-40)||(21642449-21642486)
chr7 (3-40)||(23612316-23612353)
chr7 (3-40)||(28442372-28442409)
chr7 (3-40)||(36875472-36875509)
chr7 (1-41)||(26601838-26601878)
chr7 (1-40)||(1948890-1948929)
chr7 (3-38)||(3924351-3924386)
chr7 (1-40)||(15914565-15914604)
chr7 (1-40)||(15949086-15949125)
chr7 (3-46)||(39432829-39432872)
chr7 (3-40)||(2446573-2446610)
chr7 (3-40)||(37025975-37026012)
chr7 (3-40)||(41455175-41455212)
chr7 (3-40)||(48353739-48353776)
chr7 (3-41)||(5056566-5056604)
chr7 (3-40)||(6795365-6795402)
chr7 (3-40)||(33850901-33850938)
chr7 (3-40)||(41542386-41542423)
chr7 (3-40)||(45433512-45433549)
chr7 (3-40)||(48347355-48347392)
chr7 (1-40)||(9643174-9643214)
[»] chr2 (21 HSPs)
chr2 (1-41)||(33033677-33033717)
chr2 (1-40)||(2021704-2021743)
chr2 (3-42)||(2157537-2157576)
chr2 (3-42)||(42931630-42931669)
chr2 (3-40)||(2163955-2163992)
chr2 (3-40)||(15852476-15852513)
chr2 (3-40)||(21332252-21332289)
chr2 (3-40)||(21342140-21342177)
chr2 (3-40)||(29484853-29484890)
chr2 (3-40)||(34835070-34835107)
chr2 (3-40)||(34841514-34841551)
chr2 (3-40)||(36782443-36782480)
chr2 (3-40)||(43267785-43267822)
chr2 (3-40)||(45011909-45011946)
chr2 (1-40)||(16817585-16817624)
chr2 (1-40)||(16856742-16856781)
chr2 (3-41)||(44611168-44611206)
chr2 (3-40)||(12950723-12950760)
chr2 (3-40)||(13902215-13902252)
chr2 (3-38)||(41455535-41455570)
chr2 (3-40)||(36838070-36838107)
[»] chr1 (22 HSPs)
chr1 (1-41)||(29001657-29001697)
chr1 (3-41)||(6238581-6238619)
chr1 (3-40)||(1174532-1174569)
chr1 (3-40)||(27240389-27240426)
chr1 (3-40)||(39053596-39053633)
chr1 (3-40)||(39059968-39060005)
chr1 (3-40)||(43686554-43686591)
chr1 (3-40)||(45015708-45015745)
chr1 (1-40)||(23764688-23764727)
chr1 (1-40)||(26621396-26621435)
chr1 (3-42)||(27041107-27041146)
chr1 (3-40)||(2825077-2825114)
chr1 (3-40)||(4599455-4599492)
chr1 (3-40)||(9869032-9869069)
chr1 (3-40)||(11913519-11913556)
chr1 (3-40)||(39805984-39806021)
chr1 (3-40)||(41297443-41297480)
chr1 (3-40)||(42091823-42091860)
chr1 (3-38)||(38673026-38673061)
chr1 (3-41)||(31072244-31072282)
chr1 (3-41)||(32797662-32797700)
chr1 (3-40)||(44241284-44241321)
[»] chr4 (14 HSPs)
chr4 (3-42)||(48914824-48914863)
chr4 (3-42)||(55463030-55463069)
chr4 (3-41)||(17456780-17456818)
chr4 (3-40)||(8103808-8103845)
chr4 (3-40)||(27590232-27590269)
chr4 (3-40)||(30238187-30238224)
chr4 (3-40)||(37368573-37368610)
chr4 (3-41)||(7780333-7780371)
chr4 (3-41)||(16838617-16838655)
chr4 (3-41)||(36755057-36755095)
chr4 (3-40)||(2947772-2947809)
chr4 (3-40)||(16405269-16405306)
chr4 (3-40)||(41372913-41372950)
chr4 (1-40)||(13594032-13594072)
[»] chr3 (18 HSPs)
chr3 (1-40)||(4674854-4674893)
chr3 (1-40)||(41353788-41353827)
chr3 (3-41)||(18341550-18341588)
chr3 (3-40)||(4590721-4590758)
chr3 (3-40)||(9570808-9570845)
chr3 (3-40)||(9577310-9577347)
chr3 (3-40)||(13014913-13014950)
chr3 (3-40)||(24179001-24179038)
chr3 (3-40)||(25893157-25893194)
chr3 (3-40)||(32746297-32746334)
chr3 (1-41)||(23068390-23068430)
chr3 (1-40)||(4311742-4311781)
chr3 (3-40)||(3577196-3577233)
chr3 (3-40)||(6036193-6036230)
chr3 (3-40)||(18866705-18866742)
chr3 (3-40)||(41354328-41354365)
chr3 (3-40)||(43931509-43931546)
chr3 (3-40)||(10941562-10941599)
[»] chr6 (22 HSPs)
chr6 (3-45)||(9865019-9865061)
chr6 (3-40)||(4020494-4020531)
chr6 (3-40)||(4026920-4026957)
chr6 (3-40)||(4738582-4738619)
chr6 (3-40)||(7062742-7062779)
chr6 (3-40)||(7069958-7069995)
chr6 (3-40)||(32328751-32328788)
chr6 (3-40)||(34648726-34648763)
chr6 (3-40)||(34655177-34655214)
chr6 (1-40)||(14118818-14118857)
chr6 (1-40)||(21262831-21262870)
chr6 (3-45)||(29906812-29906854)
chr6 (3-45)||(30117526-30117568)
chr6 (3-40)||(1428681-1428718)
chr6 (3-40)||(1461190-1461227)
chr6 (3-40)||(4186612-4186649)
chr6 (3-40)||(7825914-7825951)
chr6 (3-40)||(10800833-10800870)
chr6 (3-40)||(11058408-11058445)
chr6 (3-40)||(13672075-13672112)
chr6 (3-40)||(24908347-24908384)
chr6 (3-40)||(34711815-34711852)
[»] scaffold0045 (2 HSPs)
scaffold0045 (3-40)||(9385-9422)
scaffold0045 (3-40)||(3003-3040)
[»] chr8 (15 HSPs)
chr8 (3-40)||(11358452-11358489)
chr8 (3-40)||(12768671-12768708)
chr8 (3-40)||(36022058-36022095)
chr8 (1-40)||(1238140-1238179)
chr8 (3-42)||(7311274-7311313)
chr8 (3-40)||(6464834-6464871)
chr8 (3-40)||(7934185-7934222)
chr8 (3-40)||(8013578-8013615)
chr8 (3-40)||(16710927-16710964)
chr8 (3-40)||(36005740-36005777)
chr8 (3-40)||(36075894-36075931)
chr8 (3-40)||(36425989-36426026)
chr8 (3-40)||(41242374-41242411)
chr8 (3-40)||(15012315-15012352)
chr8 (3-40)||(31017326-31017363)
[»] scaffold0513 (1 HSPs)
scaffold0513 (1-40)||(11877-11916)
[»] scaffold0053 (2 HSPs)
scaffold0053 (1-40)||(49618-49657)
scaffold0053 (1-40)||(55599-55638)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-40)||(99841-99880)
[»] scaffold0744 (1 HSPs)
scaffold0744 (3-40)||(6912-6949)
[»] scaffold0510 (1 HSPs)
scaffold0510 (3-40)||(9140-9177)
[»] scaffold0043 (1 HSPs)
scaffold0043 (3-40)||(5263-5300)
[»] scaffold0343 (1 HSPs)
scaffold0343 (3-38)||(2574-2609)
[»] scaffold0060 (1 HSPs)
scaffold0060 (3-40)||(15098-15135)


Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 41 - 317
Target Start/End: Original strand, 26450486 - 26450762
Alignment:
Q  41 catatccaatagccacagctttccttccaaataaaaattcttcttcatcctcaaatgaacttgaatctcttggttgttcttcatccttatgacatggttt 140  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26450486 catatccaatagccacagctttccatccaaataaaaattcttcttcatgctcaaatgaacttgaatctcttggttgttcttcatccttgtgacatggttt 26450585  T
Q  141 tgacaaaggaaacccacatagccctggatttcccttataggaatcattctcaaatgtattgaactgcttccctattggtatgactccctccagctggttc 240  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||     
T  26450586 tgacaaaggaaacccacatagtcctggatttcccttataggaatcattctcaaatgtattgaactgcttccctattggtatgatcccctccagctggttt 26450685  T
Q  241 agtgagaggttcaatacagaaagagagtaaagattggtcaatgcctcaggaatctcacctgtgagcttgtttgagga 317  Q
    |||||||||||||||   |||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  26450686 agtgagaggttcaatttggaaagaaagctaagattggtcaatgcctcaggaatctcacctgtgagtttgtttgagga 26450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 41 - 317
Target Start/End: Original strand, 26437117 - 26437393
Alignment:
Q  41 catatccaatagccacagctttccttccaaataaaaattcttcttcatcctcaaatgaacttgaatctcttggttgttcttcatccttatgacatggttt 140  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  26437117 catatccaatagccacagctttccatccagataaaaattcttcgtcatgctcaaatgaacttgaatctcttggctgttcttcatacttgtgacatggttt 26437216  T
Q  141 tgacaaaggaaacccacatagccctggatttcccttataggaatcattctcaaatgtattgaactgcttccctattggtatgactccctccagctggttc 240  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  26437217 tgacaaaggaagcccacaaagctctggatttcccttataggaatcattctgaaatgtattgaactggttcccacttggtatggctccctccagctggttc 26437316  T
Q  241 agtgagaggttcaatacagaaagagagtaaagattggtcaatgcctcaggaatctcacctgtgagcttgtttgagga 317  Q
    | ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  26437317 aatgagaggtttaatactgaaagagagtaaagattggtcaatgcctcaggaatctcacctgtgagtttatttgagga 26437393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5876184 - 5876145
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5876184 acaaatacttacaattgtttgatgcaaaaatactacatca 5876145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22359930 - 22359891
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22359930 acaaatacttacaattgtttgatgcaaaaatactacatca 22359891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29414925 - 29414964
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29414925 acaaatacttacaattgtttgatgcaaaaatactacatca 29414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 42150782 - 42150739
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcacatatc 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  42150782 aaatacttacaattgtttgatgcaaaaatactacatcacctatc 42150739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 2156376 - 2156413
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2156376 aaatacttacaattgtttgatgcaaaaatactacatca 2156413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 25894908 - 25894945
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25894908 aaatacttacaattgtttgatgcaaaaatactacatca 25894945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 30041502 - 30041539
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30041502 aaatacttacaattgtttgatgcaaaaatactacatca 30041539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22313796 - 22313757
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  22313796 acaaatacttacaattgtttgattcaaaaatactacatca 22313757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 2957822 - 2957784
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  2957822 aaatacttacaattgtttgatgaaaaaatactacatcac 2957784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 2966291 - 2966254
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||||| |||||||||||||||    
T  2966291 aaatacttacaattgtttgatgaaaaaatactacatca 2966254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 33794056 - 33794019
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  33794056 aaatacttactattgtttgatgcaaaaatactacatca 33794019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34357546 - 34357583
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34357546 aaatacttactattgtttgatgcaaaaatactacatca 34357583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34359337 - 34359374
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34359337 aaatacttactattgtttgatgcaaaaatactacatca 34359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 40821592 - 40821629
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40821592 aaatacttactattgtttgatgcaaaaatactacatca 40821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 42122972 - 42123043
Alignment:
Q  138 ttttgacaaaggaaacccacatagccctggatttcccttataggaatcattctcaaatgtattgaactgctt 209  Q
    ||||||||| || || ||||||| ||||| |||||| | ||||||||||||   ||||||||||||||||||    
T  42122972 ttttgacaagggtaatccacataaccctgaatttccttcataggaatcatttgtaaatgtattgaactgctt 42123043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 40958875 - 40958917
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcacatat 45  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||    
T  40958875 aaatacttataattgtttgatgcaataatactacatcatatat 40958917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4973529 - 4973500
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  4973529 acaaatacttacaattgtttgatgcaaaaa 4973500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1942011 - 1941971
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1942011 acaaatacttacaattgtttgatgcaaaaatactacatcac 1941971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 8142704 - 8142746
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcacatat 45  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  8142704 aaatacttacaattgtttgatgcaaaaatactacatcatatat 8142746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1378911 - 1378874
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1378911 aaatacttacaattgtttgatgcaaaaatactacatca 1378874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 5050170 - 5050207
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5050170 aaatacttacaattgtttgatgcaaaaatactacatca 5050207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 6021123 - 6021160
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6021123 aaatacttacaattgtttgatgcaaaaatactacatca 6021160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 21642486 - 21642449
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21642486 aaatacttacaattgtttgatgcaaaaatactacatca 21642449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 23612353 - 23612316
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23612353 aaatacttacaattgtttgatgcaaaaatactacatca 23612316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 28442409 - 28442372
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28442409 aaatacttacaattgtttgatgcaaaaatactacatca 28442372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 36875509 - 36875472
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36875509 aaatacttacaattgtttgatgcaaaaatactacatca 36875472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26601878 - 26601838
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  26601878 acaaatacttacaattgtttgatgtaaaaatactacatcac 26601838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1948890 - 1948929
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  1948890 acaaatacttactattgtttgatgcaaaaatactacatca 1948929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 3924351 - 3924386
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacat 38  Q
    ||||||||||||||||||||||||||||||||||||    
T  3924351 aaatacttacaattgtttgatgcaaaaatactacat 3924386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15914604 - 15914565
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  15914604 acaaatacttacatttgtttgatgcaaaaatactacatca 15914565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15949125 - 15949086
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  15949125 acaaatacttacaattatttgatgcaaaaatactacatca 15949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 39432872 - 39432829
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcacatatc 46  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  39432872 aaatatttactattgtttgatgcaaaaatactacatcacatatc 39432829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 2446610 - 2446573
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2446610 aaatacttactattgtttgatgcaaaaatactacatca 2446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 37026012 - 37025975
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37026012 aaatacttactattgtttgatgcaaaaatactacatca 37025975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 41455175 - 41455212
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41455175 aaatacttactattgtttgatgcaaaaatactacatca 41455212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 48353739 - 48353776
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||||| |||||||||||||||    
T  48353739 aaatacttacaattgtttgatgaaaaaatactacatca 48353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 5056566 - 5056604
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  5056566 aaatacttactattgtttgatgaaaaaatactacatcac 5056604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 6795402 - 6795365
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  6795402 aaatatttactattgtttgatgcaaaaatactacatca 6795365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 33850901 - 33850938
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  33850901 aaatacttaccattttttgatgcaaaaatactacatca 33850938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 41542423 - 41542386
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  41542423 aaatacttactattatttgatgcaaaaatactacatca 41542386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 45433549 - 45433512
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||| || |||||||||||||||||||||||||||    
T  45433549 aaatactcactattgtttgatgcaaaaatactacatca 45433512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 48347355 - 48347392
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  48347355 aaatacttacaattgtttgatgaaaaaatattacatca 48347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9643174 - 9643214
Alignment:
Q  1 acaaatacttacaattgttt-gatgcaaaaatactacatca 40  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  9643174 acaaatacttacaattattttgatgcaaaaatactacatca 9643214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33033717 - 33033677
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33033717 acaaatacttacaattgtttgatgcaaaaatactacatcac 33033677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2021704 - 2021743
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2021704 acaaatacttacaattgtttgatgcaaaaatactacatca 2021743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 2157576 - 2157537
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcaca 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2157576 aaatacttacaattgtttgatgcaaaaatactacatcaca 2157537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 42931630 - 42931669
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcaca 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42931630 aaatacttacaattgtttgatgcaaaaatactacatcaca 42931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 2163992 - 2163955
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2163992 aaatacttacaattgtttgatgcaaaaatactacatca 2163955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 15852513 - 15852476
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15852513 aaatacttacaattgtttgatgcaaaaatactacatca 15852476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 21332252 - 21332289
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21332252 aaatacttacaattgtttgatgcaaaaatactacatca 21332289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 21342140 - 21342177
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21342140 aaatacttacaattgtttgatgcaaaaatactacatca 21342177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 29484890 - 29484853
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29484890 aaatacttacaattgtttgatgcaaaaatactacatca 29484853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34835070 - 34835107
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34835070 aaatacttacaattgtttgatgcaaaaatactacatca 34835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34841514 - 34841551
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34841514 aaatacttacaattgtttgatgcaaaaatactacatca 34841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 36782443 - 36782480
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36782443 aaatacttacaattgtttgatgcaaaaatactacatca 36782480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 43267822 - 43267785
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43267822 aaatacttacaattgtttgatgcaaaaatactacatca 43267785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 45011946 - 45011909
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45011946 aaatacttacaattgtttgatgcaaaaatactacatca 45011909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16817585 - 16817624
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  16817585 acaaatacttactattgtttgatgcaaaaatactacatca 16817624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16856742 - 16856781
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  16856742 acaaatacttactattgtttgatgcaaaaatactacatca 16856781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 44611206 - 44611168
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44611206 aaatacttactattgtttgatgcaaaaatactacatcac 44611168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 12950760 - 12950723
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  12950760 aaatacttactattgtttgatgcaaaaatactacatca 12950723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 13902215 - 13902252
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13902215 aaatacttactattgtttgatgcaaaaatactacatca 13902252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 41455570 - 41455535
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacat 38  Q
    |||||||||| |||||||||||||||||||||||||    
T  41455570 aaatacttactattgtttgatgcaaaaatactacat 41455535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 36838107 - 36838070
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  36838107 aaatacttacttttgtttgatgcaaaaatactacatca 36838070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29001697 - 29001657
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29001697 acaaatacttacaattgtttgatgcaaaaatactacatcac 29001657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 6238619 - 6238581
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6238619 aaatacttacaattgtttgatgcaaaaatactacatcac 6238581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1174569 - 1174532
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1174569 aaatacttacaattgtttgatgcaaaaatactacatca 1174532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 27240389 - 27240426
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27240389 aaatacttacaattgtttgatgcaaaaatactacatca 27240426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 39053596 - 39053633
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39053596 aaatacttacaattgtttgatgcaaaaatactacatca 39053633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 39059968 - 39060005
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39059968 aaatacttacaattgtttgatgcaaaaatactacatca 39060005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 43686591 - 43686554
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43686591 aaatacttacaattgtttgatgcaaaaatactacatca 43686554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 45015745 - 45015708
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45015745 aaatacttacaattgtttgatgcaaaaatactacatca 45015708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23764688 - 23764727
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  23764688 acaaacacttacaattgtttgatgcaaaaatactacatca 23764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26621435 - 26621396
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  26621435 acaaatacttactattgtttgatgcaaaaatactacatca 26621396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 27041146 - 27041107
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  27041146 aaatacttactattgtttgatgcaaaaatactacatcaca 27041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 2825077 - 2825114
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||||||||||||| |||||||    
T  2825077 aaatacttacaattgtttgatgcaaaaatattacatca 2825114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 4599492 - 4599455
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4599492 aaatacttactattgtttgatgcaaaaatactacatca 4599455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 9869069 - 9869032
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  9869069 aaatacttactattgtttgatgcaaaaatactacatca 9869032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 11913519 - 11913556
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11913519 aaatacttactattgtttgatgcaaaaatactacatca 11913556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 39806021 - 39805984
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  39806021 aaatacttaccattgtttgatgcaaaaatactacatca 39805984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 41297480 - 41297443
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||| |||||||||||||||||||||||    
T  41297480 aaatacttacaattatttgatgcaaaaatactacatca 41297443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 42091860 - 42091823
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  42091860 aaatacttactattgtttgatgcaaaaatactacatca 42091823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 38673026 - 38673061
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacat 38  Q
    |||||||||| |||||||||||||||||||||||||    
T  38673026 aaatacttactattgtttgatgcaaaaatactacat 38673061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 31072282 - 31072244
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  31072282 aaatacttactattgtttgatgcaaaactactacatcac 31072244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 32797700 - 32797662
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  32797700 aaatacttactattgtttgatgcaaaaataccacatcac 32797662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 44241321 - 44241284
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  44241321 aaatatttactattgtttgatgcaaaaatactacatca 44241284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 48914863 - 48914824
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcaca 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48914863 aaatacttacaattgtttgatgcaaaaatactacatcaca 48914824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 55463030 - 55463069
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcaca 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55463030 aaatacttacaattgtttgatgcaaaaatactacatcaca 55463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 17456818 - 17456780
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17456818 aaatacttacaattgtttgatgcaaaaatactacatcac 17456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 8103845 - 8103808
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8103845 aaatacttacaattgtttgatgcaaaaatactacatca 8103808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 27590269 - 27590232
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27590269 aaatacttacaattgtttgatgcaaaaatactacatca 27590232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 30238224 - 30238187
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30238224 aaatacttacaattgtttgatgcaaaaatactacatca 30238187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 37368573 - 37368610
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37368573 aaatacttacaattgtttgatgcaaaaatactacatca 37368610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 7780371 - 7780333
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  7780371 aaatacttactattgtttgatgcaaaaatactacatcac 7780333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 16838617 - 16838655
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16838617 aaatacttactattgtttgatgcaaaaatactacatcac 16838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 36755057 - 36755095
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  36755057 aaatacttactattgtttgatgcaaaaatactacatcac 36755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 2947809 - 2947772
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2947809 aaatacttactattgtttgatgcaaaaatactacatca 2947772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 16405306 - 16405269
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16405306 aaatacttactattgtttgatgcaaaaatactacatca 16405269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 41372950 - 41372913
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||| |||||||||||||||||||||||||||||    
T  41372950 aaatacttgcaattgtttgatgcaaaaatactacatca 41372913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13594072 - 13594032
Alignment:
Q  1 acaaatacttacaattgttt-gatgcaaaaatactacatca 40  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  13594072 acaaatacttacaattattttgatgcaaaaatactacatca 13594032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4674893 - 4674854
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4674893 acaaatacttacaattgtttgatgcaaaaatactacatca 4674854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 41353827 - 41353788
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41353827 acaaatacttacaattgtttgatgcaaaaatactacatca 41353788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 18341550 - 18341588
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18341550 aaatacttacaattgtttgatgcaaaaatactacatcac 18341588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 4590758 - 4590721
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4590758 aaatacttacaattgtttgatgcaaaaatactacatca 4590721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9570808 - 9570845
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9570808 aaatacttacaattgtttgatgcaaaaatactacatca 9570845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9577310 - 9577347
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9577310 aaatacttacaattgtttgatgcaaaaatactacatca 9577347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 13014950 - 13014913
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13014950 aaatacttacaattgtttgatgcaaaaatactacatca 13014913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 24179038 - 24179001
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24179038 aaatacttacaattgtttgatgcaaaaatactacatca 24179001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 25893194 - 25893157
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25893194 aaatacttacaattgtttgatgcaaaaatactacatca 25893157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 32746334 - 32746297
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32746334 aaatacttacaattgtttgatgcaaaaatactacatca 32746297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23068430 - 23068390
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatcac 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  23068430 acaaatacttactattgtttgatgcaaaaatactacatcac 23068390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4311742 - 4311781
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  4311742 acaaatacttacaattgtttgttgcaaaaatactacatca 4311781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 3577196 - 3577233
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3577196 aaatacttactattgtttgatgcaaaaatactacatca 3577233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 6036230 - 6036193
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6036230 aaatacttacaattatttgatgcaaaaatactacatca 6036193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 18866742 - 18866705
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18866742 aaatacttactattgtttgatgcaaaaatactacatca 18866705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 41354328 - 41354365
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||| |||||||||||||||||||||||||||||    
T  41354328 aaatacttgcaattgtttgatgcaaaaatactacatca 41354365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 43931546 - 43931509
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43931546 aaatacttactattgtttgatgcaaaaatactacatca 43931509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 10941562 - 10941599
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  10941562 aaatacttactattggttgatgcaaaaatactacatca 10941599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 9865019 - 9865061
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcacatat 45  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  9865019 aaatacttacaattgtttgatgcaaaaatactacatcaaatat 9865061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 4020494 - 4020531
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4020494 aaatacttacaattgtttgatgcaaaaatactacatca 4020531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 4026920 - 4026957
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4026920 aaatacttacaattgtttgatgcaaaaatactacatca 4026957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 4738582 - 4738619
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4738582 aaatacttacaattgtttgatgcaaaaatactacatca 4738619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 7062742 - 7062779
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7062742 aaatacttacaattgtttgatgcaaaaatactacatca 7062779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 7069958 - 7069995
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7069958 aaatacttacaattgtttgatgcaaaaatactacatca 7069995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 32328751 - 32328788
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32328751 aaatacttacaattgtttgatgcaaaaatactacatca 32328788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 34648763 - 34648726
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34648763 aaatacttacaattgtttgatgcaaaaatactacatca 34648726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 34655214 - 34655177
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34655214 aaatacttacaattgtttgatgcaaaaatactacatca 34655177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14118818 - 14118857
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  14118818 acaaatacttaaaattgtttgatgcaaaaatactacatca 14118857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21262831 - 21262870
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  21262831 acaaatacttactattgtttgatgcaaaaatactacatca 21262870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 29906854 - 29906812
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcacatat 45  Q
    |||||||||| ||||||||||||||||||||||||||| ||||    
T  29906854 aaatacttactattgtttgatgcaaaaatactacatcaaatat 29906812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 30117526 - 30117568
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcacatat 45  Q
    |||||||||| ||||||||||||||||||||||||||| ||||    
T  30117526 aaatacttactattgtttgatgcaaaaatactacatcaaatat 30117568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 1428681 - 1428718
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  1428681 aaatacttactattgtttgatgcaaaaatactacatca 1428718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1461227 - 1461190
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1461227 aaatacttacaattgtttgatgcaaaaatattacatca 1461190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 4186649 - 4186612
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4186649 aaatacttacaattgtttgaggcaaaaatactacatca 4186612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 7825951 - 7825914
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7825951 aaatacttactattgtttgatgcaaaaatactacatca 7825914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 10800833 - 10800870
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10800833 aaatacttactattgtttgatgcaaaaatactacatca 10800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 11058408 - 11058445
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11058408 aaatacttactattgtttgatgcaaaaatactacatca 11058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 13672075 - 13672112
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13672075 aaatacttactattgtttgatgcaaaaatactacatca 13672112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 24908384 - 24908347
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24908384 aaatacttactattgtttgatgcaaaaatactacatca 24908347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34711815 - 34711852
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34711815 aaatacttactattgtttgatgcaaaaatactacatca 34711852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9385 - 9422
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9385 aaatacttacaattgtttgatgcaaaaatactacatca 9422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 3003 - 3040
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3003 aaatacttacaattgtttgatgcaaaaatattacatca 3040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 11358452 - 11358489
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11358452 aaatacttacaattgtttgatgcaaaaatactacatca 11358489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 12768708 - 12768671
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12768708 aaatacttacaattgtttgatgcaaaaatactacatca 12768671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 36022058 - 36022095
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36022058 aaatacttacaattgtttgatgcaaaaatactacatca 36022095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1238179 - 1238140
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  1238179 acaaatacttacaattgtttgatgcaaaaatattacatca 1238140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 7311313 - 7311274
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatcaca 42  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  7311313 aaatacttactattgtttgatgcaaaaatactacatcaca 7311274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 6464834 - 6464871
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6464834 aaatacttactattgtttgatgcaaaaatactacatca 6464871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 7934185 - 7934222
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7934185 aaatacttactattgtttgatgcaaaaatactacatca 7934222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 8013578 - 8013615
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  8013578 aaatacttactattgtttgatgcaaaaatactacatca 8013615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 16710927 - 16710964
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16710927 aaatacttactattgtttgatgcaaaaatactacatca 16710964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 36005740 - 36005777
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  36005740 aaatacttactattgtttgatgcaaaaatactacatca 36005777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 36075931 - 36075894
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  36075931 aaatacttactattgtttgatgcaaaaatactacatca 36075894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 36425989 - 36426026
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  36425989 aaatacttacaattgtttgatgcaaaaatacaacatca 36426026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 41242374 - 41242411
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41242374 aaatacttactattgtttgatgcaaaaatactacatca 41242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 15012352 - 15012315
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  15012352 aaatacttactattgtgtgatgcaaaaatactacatca 15012315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 31017363 - 31017326
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  31017363 aaatacttactattgtttgatacaaaaatactacatca 31017326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11916 - 11877
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  11916 acaaatacttacaattatttgatgcaaaaatactacatca 11877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 49657 - 49618
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  49657 acaaatacttactattgtttgatgcaaaaatactacatca 49618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 55638 - 55599
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  55638 acaaatacttactattgtttgatgcaacaatactacatca 55599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 99880 - 99841
Alignment:
Q  1 acaaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  99880 acaaatacttactattgtttgatgcaaaaatactacatca 99841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 6949 - 6912
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6949 aaatacttactattgtttgatgcaaaaatactacatca 6912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9140 - 9177
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9140 aaatacttacaattatttgatgcaaaaatactacatca 9177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 5263 - 5300
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| |||||||||||||||||||||||||||    
T  5263 aaatacttactattgtttgatgcaaaaatactacatca 5300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 2609 - 2574
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacat 38  Q
    |||||||||| |||||||||||||||||||||||||    
T  2609 aaatacttactattgtttgatgcaaaaatactacat 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 15135 - 15098
Alignment:
Q  3 aaatacttacaattgtttgatgcaaaaatactacatca 40  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  15135 aaatacttactattgtttaatgcaaaaatactacatca 15098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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