View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6973_low_7 (Length: 724)

Name: NF6973_low_7
Description: NF6973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6973_low_7
NF6973_low_7
[»] chr1 (35 HSPs)
chr1 (19-695)||(23378009-23378683)
chr1 (523-694)||(23591698-23591867)
chr1 (523-694)||(1502729-1502897)
chr1 (523-694)||(38812740-38812909)
chr1 (342-413)||(23377478-23377549)
chr1 (523-694)||(13321876-13322045)
chr1 (523-694)||(30171879-30172048)
chr1 (523-694)||(30187420-30187589)
chr1 (523-694)||(23576423-23576591)
chr1 (523-692)||(6754474-6754640)
chr1 (530-678)||(36490795-36490941)
chr1 (523-692)||(41624832-41624998)
chr1 (523-694)||(6180186-6180355)
chr1 (523-694)||(39150336-39150504)
chr1 (546-694)||(39627603-39627749)
chr1 (523-694)||(35512725-35512894)
chr1 (539-683)||(47355403-47355544)
chr1 (528-694)||(7824872-7825036)
chr1 (523-694)||(22167335-22167504)
chr1 (539-683)||(7520022-7520164)
chr1 (523-640)||(52337821-52337935)
chr1 (523-694)||(17919454-17919622)
chr1 (433-499)||(18577996-18578062)
chr1 (605-693)||(5857990-5858079)
chr1 (624-697)||(29924356-29924429)
chr1 (523-574)||(25465276-25465327)
chr1 (582-694)||(34050351-34050461)
chr1 (628-694)||(44918025-44918091)
chr1 (583-694)||(3121119-3121227)
chr1 (628-693)||(8062206-8062271)
chr1 (577-632)||(33048175-33048227)
chr1 (605-662)||(35941110-35941167)
chr1 (609-686)||(43317498-43317575)
chr1 (585-682)||(50079870-50079966)
chr1 (629-694)||(51382372-51382437)
[»] chr4 (38 HSPs)
chr4 (531-694)||(2096871-2097032)
chr4 (523-694)||(24684836-24685006)
chr4 (523-694)||(9759151-9759319)
chr4 (525-694)||(19468194-19468361)
chr4 (525-692)||(19450911-19451076)
chr4 (523-694)||(16667393-16667562)
chr4 (530-694)||(50352303-50352464)
chr4 (523-694)||(17409824-17409993)
chr4 (523-692)||(49181074-49181241)
chr4 (586-694)||(7349689-7349794)
chr4 (610-680)||(10813587-10813658)
chr4 (525-694)||(40049559-40049725)
chr4 (531-694)||(8736828-8736988)
chr4 (523-694)||(23545476-23545645)
chr4 (523-694)||(27019260-27019429)
chr4 (523-694)||(34941278-34941447)
chr4 (531-657)||(37784877-37785001)
chr4 (585-694)||(6875501-6875608)
chr4 (578-694)||(25843291-25843406)
chr4 (523-679)||(27362406-27362560)
chr4 (531-694)||(52391298-52391459)
chr4 (523-694)||(54495646-54495815)
chr4 (629-694)||(10389380-10389445)
chr4 (579-693)||(33632267-33632379)
chr4 (626-683)||(40681960-40682017)
chr4 (629-694)||(49228357-49228422)
chr4 (532-638)||(1378075-1378178)
chr4 (579-693)||(19838756-19838866)
chr4 (531-681)||(39876844-39876991)
chr4 (631-694)||(45742368-45742431)
chr4 (530-638)||(55813920-55814026)
chr4 (579-670)||(13009820-13009909)
chr4 (523-694)||(47326901-47327070)
chr4 (523-694)||(47341697-47341866)
chr4 (605-694)||(49332333-49332423)
chr4 (617-694)||(10658544-10658621)
chr4 (617-694)||(10872689-10872766)
chr4 (531-693)||(51691343-51691502)
[»] chr7 (24 HSPs)
chr7 (584-694)||(42750289-42750396)
chr7 (523-693)||(47457470-47457638)
chr7 (433-513)||(19017845-19017925)
chr7 (523-695)||(26300572-26300740)
chr7 (523-694)||(24462964-24463132)
chr7 (523-694)||(33342989-33343157)
chr7 (523-692)||(7170005-7170171)
chr7 (523-687)||(25709408-25709570)
chr7 (523-694)||(46290011-46290179)
chr7 (523-694)||(4969773-4969942)
chr7 (523-694)||(19889341-19889509)
chr7 (585-694)||(19868114-19868221)
chr7 (523-694)||(34270266-34270430)
chr7 (523-694)||(9331962-9332130)
chr7 (523-694)||(23982764-23982933)
chr7 (523-601)||(33072072-33072150)
chr7 (541-694)||(47707911-47708065)
chr7 (577-667)||(3530177-3530264)
chr7 (523-667)||(8091321-8091463)
chr7 (523-569)||(26050470-26050516)
chr7 (523-569)||(26059829-26059875)
chr7 (523-601)||(29398143-29398221)
chr7 (629-694)||(24250314-24250379)
chr7 (629-694)||(29398227-29398292)
[»] chr8 (42 HSPs)
chr8 (523-694)||(26682068-26682237)
chr8 (523-694)||(6818017-6818186)
chr8 (523-694)||(31812113-31812282)
chr8 (523-694)||(3306064-3306232)
chr8 (523-694)||(20514632-20514802)
chr8 (523-694)||(2161388-2161556)
chr8 (629-694)||(7750668-7750733)
chr8 (530-694)||(12131983-12132145)
chr8 (523-694)||(9580118-9580287)
chr8 (587-694)||(14816198-14816303)
chr8 (587-694)||(14829437-14829542)
chr8 (579-694)||(38843704-38843817)
chr8 (629-694)||(11923015-11923080)
chr8 (629-694)||(38527821-38527886)
chr8 (523-658)||(39024866-39024998)
chr8 (523-694)||(12189597-12189766)
chr8 (523-694)||(12434025-12434194)
chr8 (579-665)||(34741730-34741813)
chr8 (608-694)||(8284660-8284747)
chr8 (530-694)||(45005970-45006131)
chr8 (609-686)||(5298077-5298157)
chr8 (523-694)||(13327950-13328118)
chr8 (587-694)||(35678347-35678452)
chr8 (523-694)||(36967079-36967248)
chr8 (629-694)||(7140571-7140636)
chr8 (629-694)||(9824959-9825024)
chr8 (580-674)||(16445801-16445893)
chr8 (629-694)||(40210933-40210998)
chr8 (633-693)||(11947016-11947076)
chr8 (586-694)||(9743862-9743967)
chr8 (579-687)||(10974619-10974725)
chr8 (523-692)||(28014867-28015032)
chr8 (523-601)||(2083078-2083156)
chr8 (648-694)||(11117129-11117175)
chr8 (523-694)||(26834561-26834730)
chr8 (583-694)||(32186186-32186295)
chr8 (646-696)||(37523756-37523806)
chr8 (652-694)||(38213081-38213123)
chr8 (609-667)||(44091346-44091404)
chr8 (629-694)||(10129104-10129169)
chr8 (629-694)||(12346006-12346071)
chr8 (610-667)||(45516316-45516373)
[»] chr2 (30 HSPs)
chr2 (524-694)||(15411632-15411800)
chr2 (523-694)||(9747317-9747486)
chr2 (530-694)||(5583574-5583735)
chr2 (523-694)||(14377425-14377593)
chr2 (609-694)||(12438740-12438825)
chr2 (523-685)||(45062207-45062367)
chr2 (523-694)||(23932565-23932734)
chr2 (523-694)||(27665053-27665221)
chr2 (531-694)||(43806360-43806521)
chr2 (523-657)||(24729586-24729718)
chr2 (530-694)||(34213965-34214129)
chr2 (586-694)||(34817544-34817649)
chr2 (605-694)||(39367059-39367149)
chr2 (523-694)||(7757795-7757963)
chr2 (629-694)||(12016667-12016732)
chr2 (539-641)||(2579983-2580082)
chr2 (629-693)||(7720116-7720180)
chr2 (523-599)||(26003355-26003431)
chr2 (585-669)||(2051639-2051721)
chr2 (608-694)||(43388857-43388944)
chr2 (523-694)||(19228426-19228594)
chr2 (579-694)||(36612796-36612909)
chr2 (579-694)||(36620647-36620760)
chr2 (644-694)||(36909503-36909553)
chr2 (628-694)||(39904159-39904225)
chr2 (629-694)||(4579901-4579966)
chr2 (637-694)||(16754971-16755028)
chr2 (629-694)||(16919266-16919331)
chr2 (629-694)||(22705455-22705520)
chr2 (637-694)||(26003612-26003669)
[»] chr6 (18 HSPs)
chr6 (523-694)||(6016856-6017025)
chr6 (541-694)||(30623326-30623477)
chr6 (531-694)||(8977483-8977644)
chr6 (523-694)||(34692354-34692523)
chr6 (523-694)||(14228135-14228303)
chr6 (523-694)||(28943778-28943946)
chr6 (587-677)||(29730295-29730383)
chr6 (523-692)||(10887031-10887198)
chr6 (525-694)||(33017725-33017891)
chr6 (539-694)||(1017803-1017956)
chr6 (523-694)||(29863311-29863480)
chr6 (629-694)||(1814894-1814959)
chr6 (629-694)||(3485711-3485776)
chr6 (523-694)||(17552596-17552764)
chr6 (629-694)||(24979262-24979327)
chr6 (637-692)||(17596315-17596370)
chr6 (523-694)||(18332697-18332866)
chr6 (629-694)||(5363005-5363070)
[»] chr5 (23 HSPs)
chr5 (523-694)||(30839782-30839950)
chr5 (523-694)||(36597580-36597748)
chr5 (523-692)||(8103589-8103755)
chr5 (530-694)||(18841721-18841883)
chr5 (523-694)||(3398220-3398389)
chr5 (523-694)||(40512952-40513120)
chr5 (587-694)||(5958196-5958301)
chr5 (523-694)||(11636732-11636900)
chr5 (523-632)||(15240959-15241065)
chr5 (605-686)||(10665053-10665134)
chr5 (637-694)||(11360186-11360243)
chr5 (457-498)||(20058109-20058150)
chr5 (650-694)||(11250090-11250134)
chr5 (586-683)||(28629890-28629984)
chr5 (650-694)||(33072677-33072721)
chr5 (523-694)||(2795524-2795692)
chr5 (628-682)||(11375972-11376026)
chr5 (539-601)||(15820317-15820379)
chr5 (525-615)||(23995427-23995516)
chr5 (530-600)||(31567507-31567577)
chr5 (628-694)||(34578012-34578078)
chr5 (584-667)||(40309497-40309580)
chr5 (629-694)||(24014800-24014865)
[»] chr3 (31 HSPs)
chr3 (523-694)||(2571269-2571437)
chr3 (523-694)||(10307767-10307935)
chr3 (525-694)||(54527717-54527884)
chr3 (523-694)||(38389447-38389616)
chr3 (523-694)||(50204403-50204572)
chr3 (586-695)||(20938056-20938162)
chr3 (523-692)||(46492352-46492519)
chr3 (523-694)||(51618050-51618216)
chr3 (584-677)||(53794781-53794872)
chr3 (607-685)||(2379162-2379238)
chr3 (533-662)||(38786343-38786468)
chr3 (523-694)||(11610915-11611083)
chr3 (604-687)||(24569324-24569408)
chr3 (609-692)||(37444149-37444232)
chr3 (608-695)||(40330381-40330468)
chr3 (531-694)||(13495294-13495455)
chr3 (531-694)||(42180052-42180213)
chr3 (606-694)||(37055455-37055544)
chr3 (605-694)||(47386922-47387013)
chr3 (525-601)||(51401531-51401607)
chr3 (643-694)||(8497550-8497601)
chr3 (523-687)||(45983516-45983675)
chr3 (608-694)||(46845531-46845618)
chr3 (609-683)||(13879899-13879973)
chr3 (523-569)||(25633121-25633167)
chr3 (629-695)||(26200733-26200799)
chr3 (531-694)||(12515491-12515651)
chr3 (523-600)||(23523038-23523115)
chr3 (610-694)||(30214103-30214187)
chr3 (629-694)||(32321835-32321899)
chr3 (524-601)||(49396471-49396548)
[»] scaffold0111 (1 HSPs)
scaffold0111 (523-694)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (650-693)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (579-687)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (609-667)||(8506-8564)
[»] scaffold0061 (1 HSPs)
scaffold0061 (523-694)||(52788-52956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (582-693)||(94086-94195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (523-694)||(145678-145846)
[»] scaffold0011 (1 HSPs)
scaffold0011 (523-694)||(13086-13254)


Alignment Details
Target: chr1 (Bit Score: 582; Significance: 0; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 582; E-Value: 0
Query Start/End: Original strand, 19 - 695
Target Start/End: Original strand, 23378009 - 23378683
Alignment:
Q  19 atcattctacaatcattatgaagtaataaaaaataaagaaggttggggatgagagttttgtcgaatcaagtctttcattataaccaagagtagcaagaca 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  23378009 atcattctacaatcattatgaagtaataaaaa-taaagaaggttggggatgagagttttgtcgaatcaagtctgtcattataaccaagagtaacaagaca 23378107  T
Q  119 ttaagcacattgattgacttctcaatgaacataaac-atctcacaatccaattatgttcacccataagagtcaccaaatcctcatgcacattttttcagt 217  Q
    ||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378108 ttaagcacattgattgacttctcaatgaatatgtttgatctcacaatccaattatgttcacccataagagtcaccaaatcctcatgcacattttttcagt 23378207  T
Q  218 cctcactcttaaatcaccttaaaaccctaaattcaagtgaccaaatggggttatagtgtaggtctggagtacggagacaatcaatatactgacacatgtg 317  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  23378208 cctcgctcttaaatcacctcaaaaccctaaattcaagtgaccaaatgggcttatagtgtaggtctggagtacgaacacaatcaatatactgacacatgtg 23378307  T
Q  318 gtaggtcatacgttataatcaatcgattttagaaacctccatataaatcgctacagttttaacgcaatccattttacggatgaatttcatggacgcgctc 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  23378308 gtaggtcatacgttataatcaatcgattttagaaacctccatataaatcgctacagttttaacgcagtccattttac-gatgaatttcatggacgcgctc 23378406  T
Q  418 tgatcgattaggataaagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttttattgttggtataaagcc 517  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23378407 cgatcgattaggataaagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttttattgttggtat-aagcc 23378505  T
Q  518 tagactcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaaca 617  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378506 tagactcatgtacaaatttgaacatgttaagaatttcaaaatagtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaaca 23378605  T
Q  618 aataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 695  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378606 aataattgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 23378683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 23591867 - 23591698
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| ||  ||||   || |||| ||||  | ||||||||||| |||||||||||   ||||||||||| ||||||    
T  23591867 tcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatata---taactttttaataaataa 23591771  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | || |||||||||||||| ||| |||||||||||| |||||||| || ||| |||||||||||| ||||||    
T  23591770 ttattgattttcaataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttagacaaac 23591698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 1502729 - 1502897
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||   |||||||||   ||||||    
T  1502729 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata---taactttttgttaaataa 1502825  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| ||||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  1502826 ttgttgttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 1502897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 38812909 - 38812740
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| |||||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  38812909 tcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 38812813  T
Q  623 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| |  ||| |||||||||||||||||||    
T  38812812 ttgttgttttctaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttaaacaaac 38812740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 342 - 413
Target Start/End: Original strand, 23377478 - 23377549
Alignment:
Q  342 gattttagaaacctccatataaatcgctacagttttaacgcaatccattttacggatgaatttcatggacgc 413  Q
    |||||||||||||||| ||| |||| || || ||||||||||||||||||||| ||||||||||||||||||    
T  23377478 gattttagaaacctccttatcaatcactgcaattttaacgcaatccattttacagatgaatttcatggacgc 23377549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 13322045 - 13321876
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| | |||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || ||||||    
T  13322045 tcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatata---aaacttttgaaaaaataa 13321949  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  ||||||| ||||||||| || | |||||||||||||||| |  ||| |||||||||||| ||||||    
T  13321948 ttgttgtttttcaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttagacaaac 13321876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 30172048 - 30171879
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30172048 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30171952  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30171951 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30171879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 30187589 - 30187420
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30187589 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30187493  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30187492 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30187420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 23576423 - 23576591
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  23576423 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatata---taactttttgttaaataa 23576519  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| || ||| ||||||||   ||||||| || ||||||||| |||||| ||||||    
T  23576520 ttgttggtttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgcagatgttagacaaac 23576591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 692
Target Start/End: Complemental strand, 6754640 - 6754474
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  6754640 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 6754544  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  6754543 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 6754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 678
Target Start/End: Complemental strand, 36490941 - 36490795
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 628  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||| ||||      
T  36490941 caaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatata---taactttttaataaataattgttgt 36490845  T
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattg 678  Q
    ||||||||||||| ||| || ||||| ||| |||||||| || |||||||    
T  36490844 ttttcaataaaaacttactacttttaattgctttaacatgtgcaatattg 36490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 692
Target Start/End: Complemental strand, 41624998 - 41624832
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| | ||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  41624998 tcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 41624902  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     ||||  |||||||||||||||| || ||||||||| |||||||| || |||||||||||||||| ||||    
T  41624901 ttgttggtttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 6180355 - 6180186
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  6180355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataa---aacttttaaataaataa 6180259  T
Q  623 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | | |||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  6180258 ttataattttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 6180186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 39150336 - 39150504
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  39150336 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 39150431  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  39150432 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 39150504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 694
Target Start/End: Original strand, 39627603 - 39627749
Alignment:
Q  546 aagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagtt 644  Q
    ||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || || | | ||||  |||||||| |||||||    
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataagtgattgttgtttttcaattaaaagtt 39627699  T
Q  645 attaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
      || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  39627700 gctatttttagtttccttaacatgtgtaatattgcacatgttagacaaac 39627749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 35512894 - 35512725
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  35512894 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataa---aacttttgaatatataa 35512798  T
Q  623 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  35512797 atgttgttttccaagaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 35512725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 683
Target Start/End: Original strand, 47355403 - 47355544
Alignment:
Q  539 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 638  Q
    |||||||||||| || |||||  |||||||| ||||  | |||| |||||||||||||  |||   || |||||| | || ||| |||| ||||||||||    
T  47355403 acatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaatgata---tacctttttgataagtaattgttgttttcaataa 47355499  T
Q  639 aaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    ||||||  || ||||||||| |||||||| || ||||||||||||    
T  47355500 aaagtttatacttttagttgctttaacatgtgcaatattgcacat 47355544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 694
Target Start/End: Original strand, 7824872 - 7825036
Alignment:
Q  528 tacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt 627  Q
    |||||||||| ||||||||| || || |||||   || |||| | ||  |||||||||||| ||||||||||||    ||||||| || |||||| |||     
T  7824872 tacaaatttgcacatgttaaaaagtttaaaataaaaattttgtaatgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgtg 7824968  T
Q  628 attttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  7824969 gttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 7825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 22167504 - 22167335
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 621  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  22167504 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 22167409  T
Q  622 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| ||||||||| || ||||||    
T  22167408 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatggtagacaaac 22167335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 539 - 683
Target Start/End: Original strand, 7520022 - 7520164
Alignment:
Q  539 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aata 637  Q
    |||||||||||| || |||||   || |||| ||||  ||||||||||||| |||| ||||||   |||| |||||| |||||| | |||||||  ||||    
T  7520022 acatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatata---taacattttaataaataagtattattttttaata 7520118  T
Q  638 aaaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    |||| ||| || ||||||||| |||||||| || ||||||||||||    
T  7520119 aaaatttactacttttagttgctttaacatgtgcaatattgcacat 7520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 640
Target Start/End: Complemental strand, 52337935 - 52337821
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    ||||| |||| ||||||||||||||||| || ||||| |||||| || ||||| | || |  |||||||||||||||||   ||| ||||||| ||||||    
T  52337935 tcatgaacaagtttgaacatgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatata---taaatttttaataaataa 52337839  T
Q  623 ctgttattttcaataaaa 640  Q
     ||||||| | |||||||    
T  52337838 ttgttattattaataaaa 52337821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 17919622 - 17919454
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||  |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  17919622 tcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 17919527  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| |  |||||||||||||||| ||||||    
T  17919526 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcacatgttagacaaac 17919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 433 - 499
Target Start/End: Complemental strand, 18578062 - 18577996
Alignment:
Q  433 aagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttt 499  Q
    |||||||||||| ||||||| | |||||||| | |||  ||||||||| ||||||||||||||||||    
T  18578062 aagttgtgtgtagatataggattttgttttgatgatgcacattagatagttttatttgatgatgttt 18577996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 693
Target Start/End: Complemental strand, 5858079 - 5857990
Alignment:
Q  605 taactttttaacaaataactg-ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 693  Q
    ||||||||||| |||||| |  || |||| ||||||||||| ||| ||||| ||||||||| || |  ||||||||||||||||||||||    
T  5858079 taactttttaataaataattacttgtttttaataaaaagttgttacttttaattgttttaatatgtcaaatattgcacatgttaaacaaa 5857990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 29924356 - 29924429
Alignment:
Q  624 tgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaaa 697  Q
    |||||||||||||||||| || ||| ||||||||| |||| ||| |||||  ||||| |||||| |||||||||    
T  29924356 tgttattttcaataaaaaattgttatttttagttgctttagcatgtgtaacgttgcatatgttagacaaacaaa 29924429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 574
Target Start/End: Complemental strand, 25465327 - 25465276
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattg 574  Q
    |||||| |||||||| |||||||||||| |||||||| ||||||||| ||||    
T  25465327 tcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattg 25465276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 694
Target Start/End: Original strand, 34050351 - 34050461
Alignment:
Q  582 tacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgca 680  Q
    ||||||||||||| ||||||   ||| ||||| | |||||| |||| |||| |||||| || || ||| |||| |||| |||||||| || |||||||||    
T  34050351 tacattttatatttaatata---taattttttgataaataattgttgtttttcaataataatttgttacttttggttgctttaacatgtgcaatattgca 34050447  T
Q  681 catgttaaacaaac 694  Q
    ||||||| ||||||    
T  34050448 catgttagacaaac 34050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 694
Target Start/End: Complemental strand, 44918091 - 44918025
Alignment:
Q  628 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  44918091 attttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 44918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 694
Target Start/End: Complemental strand, 3121227 - 3121119
Alignment:
Q  583 acattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 682  Q
    ||||||| |||||||||||   |||||||||   |||||| ||||  |||||||||||| ||  || ||||| ||   ||||||||||||||||||||||    
T  3121227 acattttgtattaaatata---taactttttgttaaataattgttggtttcaataaaaacttgctacttttaattaccttaacatatgtaatattgcaca 3121131  T
Q  683 tgttaaacaaac 694  Q
    | ||| ||||||    
T  3121130 tattagacaaac 3121119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 8062271 - 8062206
Alignment:
Q  628 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 693  Q
    ||||||||| |||||||| || ||||||||   ||||||| |  ||||||||||||||||||||||    
T  8062271 attttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcacatgttaaacaaa 8062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 632
Target Start/End: Original strand, 33048175 - 33048227
Alignment:
Q  577 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 632  Q
    ||||||| |||||||||||||||||   ||||||||||| |||||| |||||||||    
T  33048175 atttgtatattttatattaaatata---taactttttaataaataattgttatttt 33048227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 662
Target Start/End: Original strand, 35941110 - 35941167
Alignment:
Q  605 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgtttt 662  Q
    ||||||||||| |||||| |||| |||| |||||||||||| || |||||||| ||||    
T  35941110 taactttttaataaataaatgttgtttttaataaaaagttaatacttttagttctttt 35941167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 686
Target Start/End: Complemental strand, 43317575 - 43317498
Alignment:
Q  609 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 686  Q
    ||||||| |||| | |||| ||||||| ||| ||||| || ||||||||| |||||||| |  |||||||||||||||    
T  43317575 tttttaataaatgattgttgttttcaaaaaatagttactacttttagttgctttaacatgtacaatattgcacatgtt 43317498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 682
Target Start/End: Complemental strand, 50079966 - 50079870
Alignment:
Q  585 attttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 682  Q
    |||||||||||||||   | ||| ||||||| |||||| |  | |||| |||||||||||| || ||||| ||| |||||||||| ||||||||||||    
T  50079966 attttatattaaataatatataattttttaataaataattaatttttttaataaaaagttacta-ttttaattgctttaacatatataatattgcaca 50079870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 51382437 - 51382372
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  51382437 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 51382372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 531 - 694
Target Start/End: Complemental strand, 2097032 - 2096871
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 629  Q
    ||||||| |||||||||||| ||||||||||||| |||| ||||  | |||| ||||||||||||||||||   ||||||||||| |||||| ||||  |    
T  2097032 aaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatata---taactttttaataaataattgttgtt 2096936  T
Q  630 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||||||| | | ||||||||| |||||| | || |||||||||||||||| ||||||    
T  2096935 tttcaataaaaagttgtcacttttagttgatttaacttgtgcaatattgcacatgttagacaaac 2096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 24685006 - 24684836
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  24685006 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataa---aacttttgaataaataa 24684910  T
Q  623 ctgttattttc--aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||||  || ||||||||| || | |||||||||||||||| |||||| ||||| |||||||||||||    
T  24684909 ttgttgttttccaaaaaaaaagttactactattagttgttttaacatgtgtaatgttgcaaatgttaaacaaac 24684836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 9759151 - 9759319
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    ||||||||||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  9759151 tcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatata---taactttttgttaaataa 9759247  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9759248 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9759319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 525 - 694
Target Start/End: Complemental strand, 19468361 - 19468194
Alignment:
Q  525 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 624  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataatt 19468265  T
Q  625 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  19468264 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 19468194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 692
Target Start/End: Original strand, 19450911 - 19451076
Alignment:
Q  525 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 624  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataatt 19451007  T
Q  625 gttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
    ||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||    
T  19451008 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaa 19451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 16667393 - 16667562
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || |||||| ||| ||| | |||  | ||||  ||||||||||||||||   ||| |||||||| ||||||    
T  16667393 tcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatat---gtagctttttaataaataa 16667489  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| |||| |||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  16667490 gtgttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 16667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 530 - 694
Target Start/End: Complemental strand, 50352464 - 50352303
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 629  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  50352464 caaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 50352368  T
Q  630 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  50352367 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 50352303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 17409993 - 17409824
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 621  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  17409993 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 17409898  T
Q  622 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  17409897 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 17409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 692
Target Start/End: Complemental strand, 49181241 - 49181074
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| |    
T  49181241 tcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatga 49181145  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     ||||  |||||||| ||| |||  || ||||||||   ||||||| || |||||||||||| ||| ||||    
T  49181144 ttgttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacattttagacaa 49181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 586 - 694
Target Start/End: Complemental strand, 7349794 - 7349689
Alignment:
Q  586 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 684  Q
    |||||||||||||||   ||||||||| ||||||||| ||||  |||||||| ||||||||||| |||||||||  ||||||| || |||||||||| ||    
T  7349794 ttttatattaaatat---gtaactttt-aacaaataattgttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacgtg 7349699  T
Q  685 ttaaacaaac 694  Q
    ||| ||||||    
T  7349698 ttagacaaac 7349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 610 - 680
Target Start/End: Original strand, 10813587 - 10813658
Alignment:
Q  610 ttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 680  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||  |||||||||| |||||||||    
T  10813587 ttttaacaaataattgttggttttcaataaaaagttattacttttagttgccttaacatatgcaatattgca 10813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 525 - 694
Target Start/End: Complemental strand, 40049725 - 40049559
Alignment:
Q  525 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 624  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||  ||||||| |||||||||||   ||| |||||   |||||| |    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatata---taattttttgttaaataatt 40049629  T
Q  625 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||  |||| ||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  40049628 gttggtttctataaaaacttactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 40049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 694
Target Start/End: Original strand, 8736828 - 8736988
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 630  Q
    ||||||| |||||||||||| || ||| |||||| ||||| |||  | | || ||||| |||||||||||   |||||||||||| |||||| | || ||    
T  8736828 aaatttgcacatgttaagaaatttaaagtggtaactttgacttggaact-gtgcatttcatattaaatat---gtaactttttaataaataagttttgtt 8736923  T
Q  631 tt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    || ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  8736924 tttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 8736988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 23545645 - 23545476
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||||||| || || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  23545645 tcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataa---aacttttgaataaataa 23545549  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| ||| ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  23545548 ttgttgtttttcaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 23545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 27019429 - 27019260
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| | ||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  27019429 tcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 27019333  T
Q  623 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||||||| |||| ||||||    
T  27019332 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacacgttagacaaac 27019260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 34941447 - 34941278
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| | |||||| ||||| |||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||     
T  34941447 tcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatata---taactttttaataaatag 34941351  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| |||||||||||| ||| ||||||||   |||| || || |||||| ||||||||| ||||||    
T  34941350 ttgttgtttttcaataaaaagttgttacttttagttaccttaatatgtgcaatattacacatgttagacaaac 34941278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 657
Target Start/End: Original strand, 37784877 - 37785001
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 629  Q
    ||||||| |||||||||||| |||||||| ||||||||  ||||  |||||| |||||||| |||||||   ||||||||||||| |||| | | ||  |    
T  37784877 aaatttggacatgttaagaagttcaaaatagtaaatttatattgtaatttgtgcattttatgttaaata---tgtaactttttaataaatgattattgtt 37784973  T
Q  630 tttcaataaaaagttattaattttagtt 657  Q
    |||||||||||||||  || ||||||||    
T  37784974 tttcaataaaaagttgctacttttagtt 37785001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 694
Target Start/End: Complemental strand, 6875608 - 6875501
Alignment:
Q  585 attttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    |||||||||||||| ||   |||||||| || |||||| || ||||||| |||||||  ||| || |||||||||||||||||| || ||||||||| ||    
T  6875608 attttatattaaattta---taacttttcaataaataattgatattttccaataaaatattactatttttagttgttttaacatgtgcaatattgcaaat 6875512  T
Q  684 gttaaacaaac 694  Q
    |||| ||||||    
T  6875511 gttagacaaac 6875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 694
Target Start/End: Complemental strand, 25843406 - 25843291
Alignment:
Q  578 tttgtacattttatattaaatatagtgtaa-ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaata 675  Q
    ||||| ||||||||||||||||||   ||| |||||||||||||   ||||  ||||||||||||||||| || ||||||||| |||||||| | | |||    
T  25843406 tttgtgcattttatattaaatata---taagctttttaacaaatggttgttgtttttcaataaaaagttactacttttagttgctttaacatgtattata 25843310  T
Q  676 ttgcacatgttaaacaaac 694  Q
    ||| |||||||| ||||||    
T  25843309 ttgtacatgttagacaaac 25843291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 679
Target Start/End: Complemental strand, 27362560 - 27362406
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  |||||| ||||| ||||||||||   |||| |||||| | ||||||    
T  27362560 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaata---tgtagctttttgataaataa 27362464  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgc 679  Q
     | ||  ||||||||||||| ||| || |||||| | | |||||||||| ||| ||||    
T  27362463 gttttgtttttcaataaaaaattactacttttagatatcttaacatatgcaatgttgc 27362406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 694
Target Start/End: Complemental strand, 52391459 - 52391298
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 629  Q
    ||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| ||||  |    
T  52391459 aaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataattgttgtt 52391363  T
Q  630 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||| ||||||||| || | |||||| ||||||||| || || ||| ||||| ||| ||||||    
T  52391362 tttcaaaaaaaagttactactattagttattttaacatgtgcaacattacacatattagacaaac 52391298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 54495646 - 54495815
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||| | |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  54495646 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 54495742  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | ||  ||||||| ||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  54495743 gttttgtttttcaaaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 54495815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 10389380 - 10389445
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| || ||||||||  | |||||| ||||||||||||||||||| ||||||    
T  10389380 ttttcaattaaaagttaatacttttagttactataacatgtgtaatattgcacatgttagacaaac 10389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 579 - 693
Target Start/End: Original strand, 33632267 - 33632379
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| ||||||||| || | ||||||||||| |||| | |||| ||    
T  33632267 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttttcaaaaaaaagttactactattagttgtttttacatgtataatgtt 33632363  T
Q  678 gcacatgttaaacaaa 693  Q
    |||||||||| |||||    
T  33632364 gcacatgttagacaaa 33632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 683
Target Start/End: Complemental strand, 40682017 - 40681960
Alignment:
Q  626 ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    |||||||||||||||| ||| || |||||||||  |||||||||| ||||||||||||    
T  40682017 ttattttcaataaaaaattactatttttagttgacttaacatatgcaatattgcacat 40681960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 49228422 - 49228357
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  49228422 ttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 49228357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 532 - 638
Target Start/End: Complemental strand, 1378178 - 1378075
Alignment:
Q  532 aatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattt 631  Q
    |||||| |||||||||||| || ||||||||||||||   |||  | |||||||||| ||||||||||||   |||| |||||| |||||| || | |||    
T  1378178 aatttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatata---taacattttaataaataattgatgttt 1378082  T
Q  632 tcaataa 638  Q
    |||||||    
T  1378081 tcaataa 1378075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 693
Target Start/End: Original strand, 19838756 - 19838866
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattg 678  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||  || |||||||||||| | |||||||||||||||| || ||| ||     
T  19838756 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttaaaa-aaaaagttattactattagttgttttaacatgtgcaatgttc 19838851  T
Q  679 cacatgttaaacaaa 693  Q
    ||||||||| |||||    
T  19838852 cacatgttagacaaa 19838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 531 - 681
Target Start/End: Complemental strand, 39876991 - 39876844
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 630  Q
    ||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   |||||| ||||  |    
T  39876991 aaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatata---taactttttgttaaataattgttggt 39876895  T
Q  631 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcac 681  Q
    ||||||||||| ||| || ||||||||   ||||||| || ||||||||||    
T  39876894 ttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 694
Target Start/End: Complemental strand, 45742431 - 45742368
Alignment:
Q  631 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45742431 ttcaagaaaaagttaatactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 638
Target Start/End: Complemental strand, 55814026 - 55813920
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 628  Q
    |||||||| ||||||||| || || |||||  ||| |||| ||||  ||||||||||| | |||||||||||   ||||||||||| |||||| |||| |    
T  55814026 caaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatata---taactttttaataaataattgttga 55813930  T
Q  629 ttttcaataa 638  Q
    ||||||||||    
T  55813929 ttttcaataa 55813920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 670
Target Start/End: Original strand, 13009820 - 13009909
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatg 670  Q
    ||||| ||||| |||||||||||   || |||||||  |||||| | ||| ||||||||||||| ||| || |||||||||||||||||||||    
T  13009820 ttgtatattttgtattaaatata---tagctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacatatg 13009909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 47326901 - 47327070
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47326901 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47326997  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47326998 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 47341697 - 47341866
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47341697 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47341793  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47341794 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47341866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 605 - 694
Target Start/End: Complemental strand, 49332423 - 49332333
Alignment:
Q  605 taactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||| |||||| |  |||||| |||| ||||||||||| ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  49332423 taactttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatgtgaaatattgcacatgttagacaaac 49332333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 694
Target Start/End: Original strand, 10658544 - 10658621
Alignment:
Q  617 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10658544 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10658621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 694
Target Start/End: Original strand, 10872689 - 10872766
Alignment:
Q  617 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10872689 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10872766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 693
Target Start/End: Complemental strand, 51691502 - 51691343
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-t 629  Q
    ||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||| |||||  ||||||||||   || |||||||| |||||| | ||| |    
T  51691502 aaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatata---tagctttttaataaataattattagt 51691406  T
Q  630 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 693  Q
    |||||||||| | ||| | |||||||||| |||||||| || ||| |||||||| ||| |||||    
T  51691405 tttcaataaagacttact-attttagttgctttaacatgtgcaatgttgcacattttagacaaa 51691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 584 - 694
Target Start/End: Complemental strand, 42750396 - 42750289
Alignment:
Q  584 cattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    ||||||||||||||   | ||||||||||||| |||||| | || |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  42750396 cattttatattaaa---attgtaactttttaataaataattattgttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcacat 42750300  T
Q  684 gttaaacaaac 694  Q
    |||||||||||    
T  42750299 gttaaacaaac 42750289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 523 - 693
Target Start/End: Original strand, 47457470 - 47457638
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||||||| || || ||| | |||| ||||| |||  |||| | |||||||||||| ||   ||||| ||||| || ||||||    
T  47457470 tcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatat---gtgtagcttttaaataaataa 47457566  T
Q  623 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 693  Q
     ||||||||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| |||||    
T  47457567 ttgttattttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 433 - 513
Target Start/End: Original strand, 19017845 - 19017925
Alignment:
Q  433 aagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttttattgttggtataa 513  Q
    |||||||||||  ||||||| ||||| |||| | |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  19017845 aagttgtgtgttgatataggttcttgatttgatgatgttcattagatagttttatttgatgatgttttattgttagtataa 19017925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 695
Target Start/End: Complemental strand, 26300740 - 26300572
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||||||||  | ||||| ||||| |||||||| ||   ||||||||||| || |      
T  26300740 tcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgta---taactttttaataatttt 26300644  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 695  Q
     | || ||||||||| | | ||| || ||||||||||||||||||||| |||||| ||||||||| |||||||    
T  26300643 ttttt-ttttcaatacagaattaatacttttagttgttttaacatatgcaatattacacatgttagacaaaca 26300572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 24462964 - 24463132
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || |||||  ||| ||||| ||    ||||||||||||||||||||||   ||||  ||||||| |||||     
T  24462964 tcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaata---tgtagttttttaataaatac 24463060  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||||||||| || ||| || |||||||||  ||||||| || |||||| ||||||||| ||||||    
T  24463061 ttgttgttttcaataagaaattactacttttagttgccttaacatgtgaaatatttcacatgttagacaaac 24463132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 33343157 - 33342989
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  33343157 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatata---taactttttgttaaataa 33343061  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  33343060 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 33342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 692
Target Start/End: Complemental strand, 7170171 - 7170005
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  7170171 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 7170075  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  7170074 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 7170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 687
Target Start/End: Original strand, 25709408 - 25709570
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | |||| ||||| ||||||||||    ||| |||||||| |||| |    
T  25709408 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaata---ggtagctttttaataaatta 25709504  T
Q  623 ctgttattt-tcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 687  Q
     |||| ||| |||||||||| ||| || ||||||||| |||||||| || |||||| |||||||||    
T  25709505 ttgttgtttatcaataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgtta 25709570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 46290179 - 46290011
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  46290179 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 46290083  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || ||| |||||||||||| ||||||    
T  46290082 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaattttgcacatgttagacaaac 46290011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 4969942 - 4969773
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  4969942 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 4969846  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | |  |||| ||| |||||| || || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  4969845 ttatagttttccaagaaaaagctactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 4969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 19889509 - 19889341
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  19889509 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 19889414  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  19889413 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 19889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 694
Target Start/End: Complemental strand, 19868221 - 19868114
Alignment:
Q  585 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    |||||||||||||||||   ||||||||| | |||||| || | |||| |||| |||| ||| || |||||||||| ||||||| || ||||||||||||    
T  19868221 attttatattaaatata---taactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtcttaacatgtgcaatattgcacat 19868125  T
Q  684 gttaaacaaac 694  Q
    |||| ||||||    
T  19868124 gttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 34270430 - 34270266
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  34270430 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 34270334  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||     ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34270333 ttgttggtttcaataaaaactt----cttttagttaccttaacatgtgcaatattgcacatgttagacaaac 34270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 9332130 - 9331962
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  9332130 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 9332035  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9332034 ttgttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 23982764 - 23982933
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||| |||||||| || ||| | |||| ||||| |||  | ||||  ||||||||||||||||    ||| ||||||| || |||    
T  23982764 tcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatt---taagtttttaataattaa 23982860  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||| ||| |||||||| || |||||||||  ||||||| | ||||||||||||||||| ||||||    
T  23982861 ttgttggttttgaatgaaaagttactacttttagttgccttaacatgtataatattgcacatgttagacaaac 23982933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 601
Target Start/End: Complemental strand, 33072150 - 33072072
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 601  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||    
T  33072150 tcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata 33072072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 694
Target Start/End: Original strand, 47707911 - 47708065
Alignment:
Q  541 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaa 639  Q
    |||||||||| || ||||| |||| |||||||||  | || |||||||| |||||||||||   ||||||||||| |||||| ||||  ||||| |||||    
T  47707911 atgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatata---taactttttaataaataattgttgtttttccataaa 47708007  T
Q  640 aagttattaattt---tagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |  || ||| |||   ||||||||||||||| ||||| |||||| ||| || ||||||    
T  47708008 atcttgttacttttagtagttgttttaacatgtgtaacattgcatatgatagacaaac 47708065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 577 - 667
Target Start/End: Original strand, 3530177 - 3530264
Alignment:
Q  577 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 667  Q
    |||||| |||||||||| |||||||   ||| ||||||| |||||| |||| ||||||||||||| |||||| | ||| ||| ||||||||    
T  3530177 atttgtgcattttatatcaaatata---taattttttaataaataattgttgttttcaataaaaaattattattcttaattgctttaacat 3530264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 667
Target Start/End: Original strand, 8091321 - 8091463
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | || |||||||| | |||||||||   ||||||||||| ||||||    
T  8091321 tcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatata---taactttttaataaataa 8091417  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacat 667  Q
     | || |||||||||||||| ||  || ||||||||| ||| ||||    
T  8091418 ttattgattttcaataaaaatttgctacttttagttgctttgacat 8091463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 569
Target Start/End: Original strand, 26050470 - 26050516
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 569  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26050470 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26050516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 569
Target Start/End: Original strand, 26059829 - 26059875
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 569  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26059829 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 601
Target Start/End: Original strand, 29398143 - 29398221
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 601  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  29398143 tcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 29398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 24250379 - 24250314
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  24250379 ttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 24250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 29398227 - 29398292
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  29398227 ttttcaatgaaaaattagtattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 29398292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-27; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 26682237 - 26682068
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||   ||||| |||||||| ||||||    
T  26682237 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaat---gtgtagctttttaataaataa 26682141  T
Q  623 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| ||||||    
T  26682140 ttgttgttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 6818186 - 6818017
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  6818186 tcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 6818090  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| ||||  ||||||| || ||||||||  ||||||||||  |||||||||||||||| ||||||    
T  6818089 ttgttctttttcaatgtaaagttactatttttagttcctttaacatatacaatattgcacatgttagacaaac 6818017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 31812282 - 31812113
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||| ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  31812282 tcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 31812186  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | ||| ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  31812185 gttttatttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 31812113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 3306064 - 3306232
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   ||||||    
T  3306064 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatata---taactttttgttaaataa 3306160  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  3306161 ttgttggtttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 3306232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 20514802 - 20514632
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| || ||||| ||| |||||||| || |||||||||| ||||  |||  | |||||||||||||||||||||||   ||||||||||| ||||||    
T  20514802 tcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatata---taactttttaataaataa 20514706  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaata-ttgcacatgttaaacaaac 694  Q
     || || |||||||||| || ||| || ||| ||||| |||| ||| || |||| |||||||||||| ||||||    
T  20514705 ttggtatttttcaataagaaattactactttaagttgctttaccatgtgcaatatttgcacatgttagacaaac 20514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 2161556 - 2161388
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| |||||||  ||||||||||   |||||||||   ||||||    
T  2161556 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatata---taactttttgttaaataa 2161460  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2161459 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2161388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 7750733 - 7750668
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||||||||  || |||||||||||||||||| || |||||||||||||||| ||||||    
T  7750733 ttttcaataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 7750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 530 - 694
Target Start/End: Complemental strand, 12132145 - 12131983
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgt-ta 628  Q
    |||| ||| |||||||||||| || ||| | |||| |||| ||||  | ||| |||||||||||||||||||   ||||||||||| |||||  |||       
T  12132145 caaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatata---taactttttaataaatacttgtggt 12132049  T
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||||||||  || ||||||||  |||||||| || ||| |||||||||||| ||||||    
T  12132048 ttttcaataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttagacaaac 12131983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 9580118 - 9580287
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||  |||||||||||| || ||||| | || |||| ||||  | |||||||||| |||||||||||| | |   |||| || ||||||    
T  9580118 tcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataattt---ttttgaataaataa 9580214  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||| ||| ||||||    
T  9580215 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatattagacaaac 9580287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 14816198 - 14816303
Alignment:
Q  587 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 685  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14816198 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14816294  T
Q  686 taaacaaac 694  Q
    || ||||||    
T  14816295 tagacaaac 14816303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 694
Target Start/End: Complemental strand, 14829542 - 14829437
Alignment:
Q  587 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 685  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14829542 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14829446  T
Q  686 taaacaaac 694  Q
    || ||||||    
T  14829445 tagacaaac 14829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 694
Target Start/End: Complemental strand, 38843817 - 38843704
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  38843817 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 38843721  T
Q  678 gcacatgttaaacaaac 694  Q
    |||||||||| ||||||    
T  38843720 gcacatgttagacaaac 38843704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 11923080 - 11923015
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||||||||| | ||| |||||||||||| | || |||||||||||||||| ||||||    
T  11923080 ttttcaataaaaagttatcattttcagttgttttaacttgtgcaatattgcacatgttagacaaac 11923015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 38527886 - 38527821
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| ||||||||||| |||||||||  ||||||| || |||||||||||||||| ||||||    
T  38527886 ttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 38527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 658
Target Start/End: Original strand, 39024866 - 39024998
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  |||||| ||||||||||||| ||   ||||  ||||||| || |||    
T  39024866 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaacta---tgtagatttttaataattaa 39024962  T
Q  623 ctgttattttcaataaaaagttattaattttagttg 658  Q
     ||||  ||||||||||||||||||| |||||||||    
T  39024963 ttgttggtttcaataaaaagttattacttttagttg 39024998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 12189597 - 12189766
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 621  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12189597 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12189692  T
Q  622 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12189693 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12189766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 12434025 - 12434194
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 621  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12434025 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12434120  T
Q  622 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12434121 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12434194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 665
Target Start/End: Original strand, 34741730 - 34741813
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaac 665  Q
    |||| ||||||||||||||||||   ||| ||||||| |||||| | || |||||||| ||||||| ||| ||||||||||||||||    
T  34741730 ttgtgcattttatattaaatata---taattttttaataaataattattgttttcaattaaaagttgttatttttagttgttttaac 34741813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 608 - 694
Target Start/End: Original strand, 8284660 - 8284747
Alignment:
Q  608 ctttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||| |||| ||||  |||||||||||| || ||||||||| |||||||| || |||| ||||||||||| ||||||    
T  8284660 ctttttaataaataattgttcttttttaataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgttagacaaac 8284747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 530 - 694
Target Start/End: Complemental strand, 45006131 - 45005970
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 629  Q
    |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||| | ||||||||||||    ||||||| || |||||| |||| |    
T  45006131 caaatttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataa---aacttttgaataaataattgttgt 45006036  T
Q  630 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45006035 tttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 609 - 686
Target Start/End: Complemental strand, 5298157 - 5298077
Alignment:
Q  609 tttttaacaaataactgttattttcaataaaaag---ttattaattttagttgttttaacatatgtaatattgcacatgtt 686  Q
    ||||||| |||||| |||| |||||||||||||    || ||| ||||||| |||||||||| ||||||||||||||||||    
T  5298157 tttttaataaataattgttgttttcaataaaaaaaatttgttagttttagtagttttaacatgtgtaatattgcacatgtt 5298077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 13327950 - 13328118
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  13327950 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 13328045  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13328046 ttgttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13328118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 35678347 - 35678452
Alignment:
Q  587 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 685  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  |||||||| |||||||| || ||||||||  |||||||| || ||||||||||||||    
T  35678347 tttatattaaatat---gtaaatttttaataattaattgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 35678443  T
Q  686 taaacaaac 694  Q
    || ||||||    
T  35678444 tagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 36967079 - 36967248
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  36967079 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatata---aaacttttgaatatataa 36967175  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| ||| ||||||||| || | |||||||| ||||||| |  ||| |||||||||||| ||||||    
T  36967176 ttgttgttttccaagaaaaagttactactattagttgtcttaacatgtacaatgttgcacatgttagacaaac 36967248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 7140571 - 7140636
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  7140571 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 7140636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 9825024 - 9824959
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||||||||| |||||||| |||  |||||||||  ||||||||| |||||| ||||||    
T  9825024 ttttcaataaaaagttactaattttaattgcattaacatatacaatattgcatatgttagacaaac 9824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 674
Target Start/End: Original strand, 16445801 - 16445893
Alignment:
Q  580 tgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaat 674  Q
    ||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||||||||||    
T  16445801 tgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatatgtaat 16445893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 40210933 - 40210998
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  40210933 ttttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcacatgttagacaaac 40210998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 633 - 693
Target Start/End: Original strand, 11947016 - 11947076
Alignment:
Q  633 caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 693  Q
    |||||||||||||| | |||||||||||||||| | || ||||||| |||||||| |||||    
T  11947016 caataaaaagttatcatttttagttgttttaacttgtgcaatattgtacatgttagacaaa 11947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 694
Target Start/End: Complemental strand, 9743967 - 9743862
Alignment:
Q  586 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 684  Q
    |||||||||||||||   ||||||||| || |||||| ||||  ||||||||||||| ||| || |||||||||| |||||||    |||||||||||||    
T  9743967 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaataaaaaattactacttttagttgtcttaacatgcacaatattgcacatg 9743872  T
Q  685 ttaaacaaac 694  Q
    ||| ||||||    
T  9743871 ttagacaaac 9743862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 687
Target Start/End: Original strand, 10974619 - 10974725
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||||||||||||||   ||||| ||||||| |||||  | ||  |||||||||||| |||| || ||||||||| ||||||||||  |||| |    
T  10974619 ttgtacattttatattaaata---tgtaattttttaataaatagttattgtttttcaataaaatgttactacttttagttgctttaacatatacaatagt 10974715  T
Q  678 gcacatgtta 687  Q
    ||| ||||||    
T  10974716 gcatatgtta 10974725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 692
Target Start/End: Original strand, 28014867 - 28015032
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  28014867 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataa 28014963  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     |||| |||| || ||||||||| |    | |||| ||||||| | ||||| ||||||||||||| ||||    
T  28014964 ttgttgtttt-aaaaaaaagttactgcaataagttattttaacttgtgtaacattgcacatgttagacaa 28015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 601
Target Start/End: Original strand, 2083078 - 2083156
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 601  Q
    |||||| |||||||  |||| ||||||| ||||||||   ||||||| ||||  |||||| ||||||||||||||||||    
T  2083078 tcatgtgcaaatttacacatcttaagaagttcaaaataacaaatttgtattgaaatttgttcattttatattaaatata 2083156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 648 - 694
Target Start/End: Original strand, 11117129 - 11117175
Alignment:
Q  648 aattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||||    
T  11117129 aattttagttgctttaacatgtgcaatattgcacatgttagacaaac 11117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 26834730 - 26834561
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| | || ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  26834730 tcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 26834634  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | ||  ||||||||||||| ||| || |||||| | | ||| ||| || ||| ||||| |||||| ||||||    
T  26834633 gttttgtttttcaataaaaaattactacttttagatatcttagcatgtgcaatgttgcatatgttagacaaac 26834561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 694
Target Start/End: Complemental strand, 32186295 - 32186186
Alignment:
Q  583 acattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcac 681  Q
    |||||| ||||||||||||    ||||||| || | |||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||| |    
T  32186295 acatttaatattaaatataa---aacttttgaatatataaatgttgttttctaagaaaaagttactactattagttgttttaacatttgcaatgttgctc 32186199  T
Q  682 atgttaaacaaac 694  Q
    |||||||||||||    
T  32186198 atgttaaacaaac 32186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 696
Target Start/End: Complemental strand, 37523806 - 37523756
Alignment:
Q  646 ttaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaa 696  Q
    |||||||||| ||||||||||| || ||||||| |||||||| ||||||||    
T  37523806 ttaattttagctgttttaacatgtgcaatattgtacatgttagacaaacaa 37523756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 652 - 694
Target Start/End: Original strand, 38213081 - 38213123
Alignment:
Q  652 ttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  38213081 ttagttgttttaacatgtgcaatgttgcacatgttaaacaaac 38213123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 667
Target Start/End: Complemental strand, 44091404 - 44091346
Alignment:
Q  609 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 667  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  44091404 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 10129169 - 10129104
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||| ||| |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  10129169 ttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 10129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 12346071 - 12346006
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||| ||||||||| || | ||| |||||||||||| |||||| |||||||||| | ||||||    
T  12346071 ttttcaagaaaaagttactactattaattgttttaacatgtgtaatgttgcacatgtcagacaaac 12346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 667
Target Start/End: Complemental strand, 45516373 - 45516316
Alignment:
Q  610 ttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 667  Q
    |||||| |||||| ||||| |||||||||||||||| || |||||||| | |||||||    
T  45516373 ttttaataaataattgttagtttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 694
Target Start/End: Original strand, 15411632 - 15411800
Alignment:
Q  524 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataac 623  Q
    ||||| |||||||| |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||||| |||| |     
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatat---gtagctttttaataaattat 15411728  T
Q  624 tgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||| |||| ||||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  15411729 tgttgtttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 15411800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 9747486 - 9747317
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||  |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||| |||||||     
T  9747486 tcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatat---gtagcttttttacaaatag 9747390  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| ||||||| ||||| || ||||||||  |||||||| |||| |||||||||||||| ||||||    
T  9747389 ttgttgtttttcaataaatagttactacttttagttaatttaacatgtgtactattgcacatgttagacaaac 9747317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 530 - 694
Target Start/End: Original strand, 5583574 - 5583735
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 629  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  5583574 caaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 5583670  T
Q  630 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5583671 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5583735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 14377593 - 14377425
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| |||||||||    
T  14377593 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatat---gtaactttt-aacaaataa 14377498  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  ||||||||||||||||| || |||||||||  ||||||| || |||||||||| ||||| ||||||    
T  14377497 ttgttggttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacgtgttagacaaac 14377425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 694
Target Start/End: Original strand, 12438740 - 12438825
Alignment:
Q  609 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||| |||||| ||||  ||| ||| ||||||||||| |||||||||| | |||||||| |||||||||||||||| ||||||    
T  12438740 tttttaataaataattgttggttttaatgaaaagttattatttttagttgtctgaacatatgcaatattgcacatgttatacaaac 12438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 685
Target Start/End: Complemental strand, 45062367 - 45062207
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||| ||||||| |||||||| |||| |||   |||  | |||| |||||||||||||| ||   |||||||||||| ||||||    
T  45062367 tcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacat---gtaactttttaataaataa 45062271  T
Q  623 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 685  Q
     | || ||||  ||||||||||||  | ||||| |||||||||||||| |||||||| ||||||    
T  45062270 tttttgttttttaataaaaagttaccacttttaattgttttaacatatttaatattgtacatgt 45062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 23932734 - 23932565
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| | || ||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  23932734 tcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 23932638  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  23932637 ttgttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 23932565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 27665053 - 27665221
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  27665053 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 27665148  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  27665149 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 27665221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 694
Target Start/End: Complemental strand, 43806521 - 43806360
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 630  Q
    ||||||| ||||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| ||    
T  43806521 aaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataattgttgtt 43806425  T
Q  631 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||| || ||||||||| || | ||| |||||||||||| || ||| |||||||||||| ||||||    
T  43806424 ttccaagaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgttagacaaac 43806360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 657
Target Start/End: Original strand, 24729586 - 24729718
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||||| ||||| |||||| || |   ||||||||||| ||||||    
T  24729586 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattaca---taactttttaataaataa 24729682  T
Q  623 ct-gttattttcaataaaaagttattaattttagtt 657  Q
     |  |||||||||||||||| ||| || ||||||||    
T  24729683 ttatttattttcaataaaaatttactatttttagtt 24729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 694
Target Start/End: Original strand, 34213965 - 34214129
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta- 628  Q
    |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||| ||||||| ||||||| ||| | ||||||||||  |||||| ||||      
T  34213965 caaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaata-tataactttttataaaataattgttgg 34214063  T
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||||| ||| || ||||||||| |||||||| || | ||||  |||||||| ||||||    
T  34214064 ttttcaataaaaacttactatttttagttgctttaacatgtgcagtattatacatgttagacaaac 34214129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 586 - 694
Target Start/End: Complemental strand, 34817649 - 34817544
Alignment:
Q  586 ttttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 685  Q
    |||| |||||||||||   ||||||||||| |||||| |||| ||||||||||| ||||  || |||||||| |||||| |  || ||||||||| ||||    
T  34817649 ttttttattaaatata---taactttttaataaataattgttgttttcaataaatagttgatatttttagttattttaatacgtgcaatattgcatatgt 34817553  T
Q  686 taaacaaac 694  Q
    || ||||||    
T  34817552 tagacaaac 34817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 694
Target Start/End: Complemental strand, 39367149 - 39367059
Alignment:
Q  605 taactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||| |||||| | || |||||||||||||  || ||||||||||||| ||||||||| |||||  || |||||||| ||||||    
T  39367149 taactttttaataaataattattgattttcaataaaattttgttaattttagttgctttaacatacgtaatggtgtacatgttagacaaac 39367059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 7757795 - 7757963
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  7757795 tcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 7757891  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  ||| |||||||| || ||| ||||||||   ||||||| |  ||| |||||||||||| ||||||    
T  7757892 ttgttggttttaataaaaacttgttacttttagttaccttaacatgtacaattttgcacatgttagacaaac 7757963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 12016732 - 12016667
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12016732 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12016667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 641
Target Start/End: Original strand, 2579983 - 2580082
Alignment:
Q  539 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 638  Q
    |||||||||||| |||||| | |||| |||| ||||   |||||| ||||||| |||||||| |   || |||||||||||||| ||||||||| |||||    
T  2579983 acatgttaagaagttcaaactagtaagtttgtattgaattttgtatattttatgttaaatattg---aattttttaacaaataattgttatttttaataa 2580079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 629 - 693
Target Start/End: Complemental strand, 7720180 - 7720116
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 693  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| |||||    
T  7720180 ttttcaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaa 7720116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 599
Target Start/End: Original strand, 26003355 - 26003431
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 599  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||    
T  26003355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 669
Target Start/End: Complemental strand, 2051721 - 2051639
Alignment:
Q  585 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatat 669  Q
    ||||||||||||||||    ||| ||||||| |||||| |||| |||| ||||||||| ||  |||||||||||||||||||||||    
T  2051721 attttatattaaatatt---taaatttttaataaataattgttgtttttcaataaaaacttgctaattttagttgttttaacatat 2051639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 694
Target Start/End: Original strand, 43388857 - 43388944
Alignment:
Q  608 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  43388857 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 43388944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 19228594 - 19228426
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  19228594 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 19228499  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  19228498 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 19228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 694
Target Start/End: Original strand, 36612796 - 36612909
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36612796 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36612892  T
Q  678 gcacatgttaaacaaac 694  Q
    |||||||||| ||||||    
T  36612893 gcacatgttagacaaac 36612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 694
Target Start/End: Original strand, 36620647 - 36620760
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36620647 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36620743  T
Q  678 gcacatgttaaacaaac 694  Q
    |||||||||| ||||||    
T  36620744 gcacatgttagacaaac 36620760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 644 - 694
Target Start/End: Original strand, 36909503 - 36909553
Alignment:
Q  644 tattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  36909503 tattacttttaattgttttaacatgtgtaatattgcatatgttagacaaac 36909553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 694
Target Start/End: Original strand, 39904159 - 39904225
Alignment:
Q  628 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  39904159 attttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 39904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 4579901 - 4579966
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| ||  |||||||   ||||||| ||||||||||||||||||| ||||||    
T  4579901 ttttcaatgaaaagttactatatttagtttccttaacatgtgtaatattgcacatgttagacaaac 4579966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 694
Target Start/End: Complemental strand, 16755028 - 16754971
Alignment:
Q  637 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  16755028 aaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 16754971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 16919266 - 16919331
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||| ||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  16919266 ttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 16919331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Complemental strand, 22705520 - 22705455
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  22705520 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 22705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 694
Target Start/End: Original strand, 26003612 - 26003669
Alignment:
Q  637 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  26003612 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 26003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 6017025 - 6016856
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||||||| || || ||| |||||| ||||| |||  | |||| ||||| ||||||||||||   ||||||||||| ||||||    
T  6017025 tcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatata---taactttttaaaaaataa 6016929  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || |||||| ||| ||| ||| || ||| |||||||||||| ||||||    
T  6016928 gtgttgtttttcaatgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgttagacaaac 6016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 541 - 694
Target Start/End: Complemental strand, 30623477 - 30623326
Alignment:
Q  541 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaa 639  Q
    |||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| |||    
T  30623477 atgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataa---aacttttgaataaataattgttgtttttcaagaaa 30623381  T
Q  640 aagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||| || | |||||||||||||||| |||||| |||||||||||| ||||||    
T  30623380 aagttactactattagttgttttaacatgtgtaatgttgcacatgttagacaaac 30623326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 531 - 694
Target Start/End: Original strand, 8977483 - 8977644
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 629  Q
    ||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| | ||||  |    
T  8977483 aaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatgattgttgtt 8977579  T
Q  630 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||| ||| |||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  8977580 tttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 8977644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 34692523 - 34692354
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  34692523 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 34692427  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  34692426 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 34692354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 14228135 - 14228303
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  14228135 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 14228231  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  14228232 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 14228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 28943778 - 28943946
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  28943778 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 28943874  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  28943875 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 28943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 587 - 677
Target Start/End: Complemental strand, 29730383 - 29730295
Alignment:
Q  587 tttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||||||||   ||||||||||| ||||||||||| |||| ||||||||| |||||||||||| | | ||||||||||| ||||||    
T  29730383 tttatattaaatata---taactttttaataaataactgttgtttttcaataaaaacttattaattttaatagctttaacatatgcaatatt 29730295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 692
Target Start/End: Complemental strand, 10887198 - 10887031
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | ||||  |||||||||||||||   |||| |||||||| ||||||    
T  10887198 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaata---tgtagctttttaataaataa 10887102  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||    
T  10887101 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaa 10887031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 525 - 694
Target Start/End: Complemental strand, 33017891 - 33017725
Alignment:
Q  525 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 624  Q
    |||| |||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| |    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataatt 33017795  T
Q  625 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||  ||| |||||||| ||  |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  33017794 gttggttttaataaaaacttgctaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 33017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 694
Target Start/End: Original strand, 1017803 - 1017956
Alignment:
Q  539 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaata 637  Q
    |||||||||||| || ||| | |||| ||||| |||  | |||| ||||||||||||||||   ||||| ||||||| |||||| ||||  |||||||      
T  1017803 acatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaata---tgtaaatttttaataaataattgttggttttcaacg 1017899  T
Q  638 aaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| || |||||||| ||| | ||| || | |||||||||||||| ||||||    
T  1017900 aaaagttactacttttagttatttaatcatgtgcagtattgcacatgttagacaaac 1017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 29863311 - 29863480
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| |||  | |  | || | ||||||||||||| ||||    |||||||||| ||||||    
T  29863311 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataa---aactttttaataaataa 29863407  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | || |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  29863408 ttattctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 29863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 1814894 - 1814959
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||||  | ||| ||||||||| |||||||| || |||||||||||||||| ||||||    
T  1814894 ttttcaataaaaatatgttacttttagttgctttaacatgtgcaatattgcacatgttagacaaac 1814959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 3485711 - 3485776
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||||| |  |||||||||||  |||||||||||||||||| || |||||| ||||||    
T  3485711 ttttcaataaaaaggtgctaattttagttcctttaacatatgtaatattacatatgttagacaaac 3485776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 17552596 - 17552764
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| | || ||||  | ||| ||||||| |||||||||||   ||| |||||   ||||||    
T  17552596 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatata---taattttttgttaaataa 17552692  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||| ||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  17552693 ttgttggtttcgataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 17552764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 24979262 - 24979327
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  24979262 ttttcaagaaaaagttactattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 24979327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 692
Target Start/End: Complemental strand, 17596370 - 17596315
Alignment:
Q  637 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
    ||||||||| || |||||||||| ||||||| || |||||||||||||||| ||||    
T  17596370 aaaaagttactacttttagttgtcttaacatgtgcaatattgcacatgttagacaa 17596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 18332697 - 18332866
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||  |||||||||||| || ||| || ||| ||||| |||  | || | ||||| ||||||||||||   || |||||||| ||||||    
T  18332697 tcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatata---tagctttttaataaataa 18332793  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | || |||| ||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  18332794 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 18332866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 5363005 - 5363070
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5363005 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5363070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 30839950 - 30839782
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  30839950 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 30839854  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  30839853 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 30839782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 36597748 - 36597580
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  36597748 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 36597652  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  36597651 ttgttggtttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 36597580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 692
Target Start/End: Original strand, 8103589 - 8103755
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  8103589 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 8103685  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  8103686 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 694
Target Start/End: Original strand, 18841721 - 18841883
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 629  Q
    |||||||| | ||||||| || || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || |||||| |||| |    
T  18841721 caaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgttgt 18841817  T
Q  630 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  18841818 tttccaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 18841883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 3398389 - 3398220
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  3398389 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 3398293  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  3398292 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 3398220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 40513120 - 40512952
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||| ||||  ||||| | ||||| ||| |||||||   |||||||||   ||||||    
T  40513120 tcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatata---taactttttgttaaataa 40513024  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||| || || |||||   ||||||| || |||||||||||||||| ||||||    
T  40513023 ttgttgatttcaataaaaacttactacttctagttaccttaacatgtgcaatattgcacatgttagacaaac 40512952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 694
Target Start/End: Original strand, 5958196 - 5958301
Alignment:
Q  587 tttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 685  Q
    ||||||||||||||   |||| ||||||| || ||| |||| ||||||||| |||| ||| || ||||||||  |||||||| |||||||||||||||||    
T  5958196 tttatattaaatat---gtaaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatgtgtaatattgcacatgt 5958292  T
Q  686 taaacaaac 694  Q
    || ||||||    
T  5958293 tagacaaac 5958301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 11636900 - 11636732
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||| |||||||||||   |||| ||||||| || |||    
T  11636900 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat---gtaaatttttaataattaa 11636805  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  11636804 ttgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 11636732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 632
Target Start/End: Original strand, 15240959 - 15241065
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||||||| || ||||||||  |||||||| ||||  |||||| ||| ||||||||||||||   ||| ||||||| ||||||    
T  15240959 tcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatata---taattttttaataaataa 15241055  T
Q  623 ctgttatttt 632  Q
     |||| ||||    
T  15241056 ttgttgtttt 15241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 686
Target Start/End: Original strand, 10665053 - 10665134
Alignment:
Q  605 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 686  Q
    ||||||||||| |||||| |  |||||||||| ||||||||||| ||||||||   ||||||| || |||||| ||||||||    
T  10665053 taactttttaataaataattaatattttcaatgaaaagttattacttttagttaccttaacatgtgcaatattacacatgtt 10665134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 694
Target Start/End: Complemental strand, 11360243 - 11360186
Alignment:
Q  637 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||| ||| || |||||||||||||||||| |||||||||| |||||||||| ||||    
T  11360243 aaaaaattactacttttagttgttttaacatgtgtaatattgaacatgttaaataaac 11360186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 20058150 - 20058109
Alignment:
Q  457 tgttttgttcatgttcattagataattttatttgatgatgtt 498  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  20058150 tgttttgatgatgttcattagataattttatttgatgatgtt 20058109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 694
Target Start/End: Original strand, 11250090 - 11250134
Alignment:
Q  650 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  11250090 ttttagttgctttaacatgtgcaatattgcacatgttaaacaaac 11250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 586 - 683
Target Start/End: Complemental strand, 28629984 - 28629890
Alignment:
Q  586 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    |||||||||||||||   ||||||||| || |||||| ||||  |||||||| ||||||||||| ||||||||| |||||||| || ||||||| ||||    
T  28629984 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaatgaaaagttattatttttagttgctttaacatgtgcaatattgtacat 28629890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 694
Target Start/End: Complemental strand, 33072721 - 33072677
Alignment:
Q  650 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  33072721 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaac 33072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 2795692 - 2795524
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  2795692 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 2795597  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2795596 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2795524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 682
Target Start/End: Complemental strand, 11376026 - 11375972
Alignment:
Q  628 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 682  Q
    ||||||||| |||||||| || ||||||||| |||||||| || |||||||||||    
T  11376026 attttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 539 - 601
Target Start/End: Complemental strand, 15820379 - 15820317
Alignment:
Q  539 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 601  Q
    |||||| ||||| |||||||| ||||||||| ||||  ||||| ||||||| |||||||||||    
T  15820379 acatgtcaagaaattcaaaatagtaaatttgtattgaaatttgaacattttctattaaatata 15820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 615
Target Start/End: Original strand, 23995427 - 23995516
Alignment:
Q  525 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaa 615  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||||||||||| ||||||||||| | |||||||||||    
T  23995427 atgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatata-tataactttttaa 23995516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 530 - 600
Target Start/End: Original strand, 31567507 - 31567577
Alignment:
Q  530 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 600  Q
    |||||||| ||||||||| || || |||||||||| ||||  |||  |||||| |||||||||||||||||    
T  31567507 caaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatat 31567577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 694
Target Start/End: Complemental strand, 34578078 - 34578012
Alignment:
Q  628 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||| |||| |||||| ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34578078 attttcaatgaaaaattattacttttagttaccttaacatgtggaatattgcacatgttagacaaac 34578012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 667
Target Start/End: Original strand, 40309497 - 40309580
Alignment:
Q  584 cattttatattaaatatagtgtaactttttaacaaataactgttatttt---caataaaaagttattaattttagttgttttaacat 667  Q
    ||||||||||||||||||   ||||||||||| |||| | |||||||||   ||||||||  || ||| ||||||||||||||||||    
T  40309497 cattttatattaaatata---taactttttaataaattattgttatttttttcaataaaatattgttacttttagttgttttaacat 40309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 24014800 - 24014865
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||| |||||||| ||  || |||||||||||||||||| || ||| |||||||||||| ||||||    
T  24014800 ttttgaataaaaactttatacttttagttgttttaacatgtgcaatgttgcacatgttagacaaac 24014865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 2571437 - 2571269
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  2571437 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 2571341  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2571340 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2571269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 10307935 - 10307767
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| ||||||||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  10307935 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 10307839  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||||||| ||  || ||||||||   ||| ||| || |||||||||||||||| ||||||    
T  10307838 ttgttggtttcaataaaaatttgctacttttagttaccttatcatgtgcaatattgcacatgttagacaaac 10307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 525 - 694
Target Start/End: Original strand, 54527717 - 54527884
Alignment:
Q  525 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 624  Q
    |||| |||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  54527717 atgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataa---aacttttgaataaataatt 54527813  T
Q  625 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  54527814 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 54527884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 38389616 - 38389447
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  38389616 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 38389520  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  38389519 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 38389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 50204572 - 50204403
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||||| ||||||||||||    ||||||| || | ||||    
T  50204572 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataa---aacttttgaatatataa 50204476  T
Q  623 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||||||||| || ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  50204475 ttgttattttccaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 50204403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 586 - 695
Target Start/End: Complemental strand, 20938162 - 20938056
Alignment:
Q  586 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 684  Q
    |||||||||||||||   |||| |||||||  ||||| ||||| |||||||||||||||||||| ||||||||   ||||||| || |||||||||||||    
T  20938162 ttttatattaaatat---gtaa-tttttaatcaataattgttagttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcacatg 20938067  T
Q  685 ttaaacaaaca 695  Q
    ||| |||||||    
T  20938066 ttagacaaaca 20938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 692
Target Start/End: Original strand, 46492352 - 46492519
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||  ||| |||||||| || ||| | |||| |||| ||||  | ||||||||||| |||||||||||   |||||  |||| ||||||    
T  46492352 tcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatata---taactcgttaataaataa 46492448  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
     |||| |||| ||||||||| |||  | ||||||||| |||||||| || |||||||||||| ||||||||    
T  46492449 ttgttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcacattttaaacaa 46492519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 51618216 - 51618050
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||||||||| |||||||||||   ||   |||||| ||||||    
T  51618216 tcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatata---ta---ttttaataaataa 51618123  T
Q  623 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     |||| |||| || |||||| ||  |  |||||||||||||||||| || |||||||||||||||| ||||||    
T  51618122 ttgttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcacatgttagacaaac 51618050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 584 - 677
Target Start/End: Complemental strand, 53794872 - 53794781
Alignment:
Q  584 cattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||||||||||   |||||||||||| |||| | ||||| ||||||||||| |||||||| ||||||||| |||||||| || ||||||    
T  53794872 cattttatattaaatat---gtaactttttaataaattattgttacttttcaataaatagttattatttttagttggtttaacatgtgcaatatt 53794781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 685
Target Start/End: Original strand, 2379162 - 2379238
Alignment:
Q  607 actttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 685  Q
    ||||||||| |||||| |||||||  ||||||||| ||| || |||||||||||||||||| || ||||||||||||||    
T  2379162 actttttaataaataattgttatt--caataaaaacttactacttttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 533 - 662
Target Start/End: Original strand, 38786343 - 38786468
Alignment:
Q  533 atttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 632  Q
    ||||| |||||||||||| || ||||| |||| ||||| |||  ||||||  |||||||| |||||   |||||  ||||||| |||||| |||||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaat---gtgtat-tttttaataaataattgttatttt 38786438  T
Q  633 caataaaaagttattaattttagttgtttt 662  Q
    ||||||||| ||| || |||||||||||||    
T  38786439 caataaaaaattactatttttagttgtttt 38786468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 11611083 - 11610915
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  11611083 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 11610988  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  11610987 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 11610915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 687
Target Start/End: Original strand, 24569324 - 24569408
Alignment:
Q  604 gtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 687  Q
    |||||||||||| |||||| || | |||| |||||||||||||||| || ||||||| ||||||| |  ||||||||||||||||    
T  24569324 gtaactttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcacatgtta 24569408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 609 - 692
Target Start/End: Complemental strand, 37444232 - 37444149
Alignment:
Q  609 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 692  Q
    ||||||| || ||| ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  37444232 tttttaataattaattgttgatttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaa 37444149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 608 - 695
Target Start/End: Original strand, 40330381 - 40330468
Alignment:
Q  608 ctttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 695  Q
    |||||||| |||| | |||| |||||||| |||||||| || ||||| |||||||| |||  ||||| ||||| ||||||||||||||    
T  40330381 ctttttaataaattattgttgttttcaattaaaagttactatttttaattgttttatcatgcgtaatgttgcatatgttaaacaaaca 40330468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 694
Target Start/End: Complemental strand, 13495455 - 13495294
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 629  Q
    ||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||||   |||  ||||||| |||||| |||| ||    
T  13495455 aaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatat---gtaggtttttaataaataattgttgat 13495359  T
Q  630 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||| ||| || ||||||||   ||||||| || ||  |||||||||||| ||||||    
T  13495358 tttcaataaaaaattactacttttagttaccttaacatgtgcaaatttgcacatgttagacaaac 13495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 694
Target Start/End: Complemental strand, 42180213 - 42180052
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 630  Q
    ||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| | |  ||    
T  42180213 aaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataa---aacttttaaataaataattatagtt 42180117  T
Q  631 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  42180116 ttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 42180052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 694
Target Start/End: Original strand, 37055455 - 37055544
Alignment:
Q  606 aactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||| |||||| |||| |||| ||||  ||||||| || ||||||||  ||||||||||| ||||||| |||||||| ||||||    
T  37055455 aactttttaataaataattgttctttttcaatgtaaagttactatttttagttcctttaacatatgcaatattgtacatgttagacaaac 37055544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 694
Target Start/End: Complemental strand, 47387013 - 47386922
Alignment:
Q  605 taactttttaacaaataactgttatttt--caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    ||||||||||| |||||| |||| ||||  ||||||||| ||| || ||||||||| ||||| ||  | |||||||||||||||| ||||||    
T  47387013 taactttttaataaataattgtttttttttcaataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgttagacaaac 47386922  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 601
Target Start/End: Complemental strand, 51401607 - 51401531
Alignment:
Q  525 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 601  Q
    ||||||||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 51401531  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 694
Target Start/End: Original strand, 8497550 - 8497601
Alignment:
Q  643 ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||| |||||||||||||||||| || ||| |||||||||||||| ||||    
T  8497550 ttattacttttagttgttttaacatgtgcaatgttgcacatgttaaataaac 8497601  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 687
Target Start/End: Complemental strand, 45983675 - 45983516
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| ||| |||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||   | |||||| |||||||||    
T  45983675 tcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaatata---ttacttttgaacaaataa 45983579  T
Q  623 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 687  Q
     |||| ||   || ||||||||| || | ||| ||||||||||  ||||||| ||||||||||||    
T  45983578 ttgtttttcaaaaaaaaaagttactactattaattgttttaac--atgtaatgttgcacatgtta 45983516  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 694
Target Start/End: Original strand, 46845531 - 46845618
Alignment:
Q  608 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  46845531 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 46845618  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 683
Target Start/End: Original strand, 13879899 - 13879973
Alignment:
Q  609 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 683  Q
    ||||||| |||||| |||  |||||||||||||||| | | ||| |||| |||||| || |||||||||||||||    
T  13879899 tttttaataaataattgtggttttcaataaaaagttttcactttcagttattttaagatgtgtaatattgcacat 13879973  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 569
Target Start/End: Complemental strand, 25633167 - 25633121
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 569  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  25633167 tcatgtgcaaatttgaacttgttaagaagttcaaaatagtaaatttg 25633121  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 629 - 695
Target Start/End: Original strand, 26200733 - 26200799
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 695  Q
    |||||| |||||||||| || |  |||||| ||||||||||| ||||||||| |||||| |||||||    
T  26200733 ttttcagtaaaaagttactactcctagttgctttaacatatgcaatattgcaaatgttatacaaaca 26200799  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 694
Target Start/End: Original strand, 12515491 - 12515651
Alignment:
Q  531 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 630  Q
    ||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||  |    
T  12515491 aaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataattgttggt 12515587  T
Q  631 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    || |||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12515588 tttaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12515651  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 600
Target Start/End: Complemental strand, 23523115 - 23523038
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 600  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||    
T  23523115 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatat 23523038  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 694
Target Start/End: Original strand, 30214103 - 30214187
Alignment:
Q  610 ttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||| |||||| |||| ||||||||| |||||||| || |||||||||  |||  || ||||||||||||||||||| ||||||    
T  30214103 ttttaataaataattgttgattttcaatgaaaagttacta-ttttagttgccttagaatgtgtaatattgcacatgttagacaaac 30214187  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 694
Target Start/End: Original strand, 32321835 - 32321899
Alignment:
Q  629 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
    |||||||||||| |||  || |||||||| |||||||||||| |||||| ||||||||| ||||||    
T  32321835 ttttcaataaaa-gttgatatttttagttcttttaacatatgcaatattacacatgttatacaaac 32321899  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 601
Target Start/End: Complemental strand, 49396548 - 49396471
Alignment:
Q  524 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 601  Q
    ||||| |||||||| |||| ||||||| || ||| | |||||||||||||   |||| | ||||||||||||||||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatata 49396471  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 37123 - 37292
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| || ||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  37123 tcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 37219  T
Q  623 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  37220 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 37292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 693
Target Start/End: Complemental strand, 486 - 443
Alignment:
Q  650 ttttagttgttttaacatatgtaatattgcacatgttaaacaaa 693  Q
    ||||||||| |||||||| || ||||||||||||||||||||||    
T  486 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaa 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 687
Target Start/End: Original strand, 13723 - 13829
Alignment:
Q  579 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 677  Q
    |||||||||  ||||||||||||    ||||||| || |||||||| || ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  13723 ttgtacattaaatattaaatataa---aacttttaaataaataacttttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 13819  T
Q  678 gcacatgtta 687  Q
    ||||||||||    
T  13820 gcacatgtta 13829  T

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Target: scaffold0618 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 667
Target Start/End: Original strand, 8506 - 8564
Alignment:
Q  609 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 667  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  8506 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Original strand, 52788 - 52956
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  52788 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 52883  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  52884 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 52956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 582 - 693
Target Start/End: Original strand, 94086 - 94195
Alignment:
Q  582 tacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 680  Q
    |||||||| |||||||||||  ||   ||||||| |||||| | ||| ||||||||||||| ||| || ||||||||| |||||||| || ||| |||||    
T  94086 tacattttgtattaaatatatagt---tttttaataaataattattagttttcaataaaaacttactacttttagttgatttaacatgtgcaatgttgca 94182  T
Q  681 catgttaaacaaa 693  Q
     |||||| |||||    
T  94183 tatgttagacaaa 94195  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 145846 - 145678
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  145846 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 145751  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  145750 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 145678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 694
Target Start/End: Complemental strand, 13254 - 13086
Alignment:
Q  523 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 622  Q
    |||||| |||||||| |||||||||||| || ||||| |||| ||| | |||  ||||||   |||||||||||||||   ||| ||||| | |||  ||    
T  13254 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatat---gtagcttttaatcaac-aa 13159  T
Q  623 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 694  Q
     ||||  |||||||| |||| ||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13158 ttgttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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