View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6973_low_79 (Length: 258)
Name: NF6973_low_79
Description: NF6973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6973_low_79 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 258
Target Start/End: Complemental strand, 37373309 - 37373067
Alignment:
| Q |
16 |
acatcaatgttgtagatctcgaagtattgatattttggtcacatttgtcacttttgtggctattgtgttattgtatgatattaattttgatgttgtgagc |
115 |
Q |
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| T |
37373309 |
acatcaatgttgtagatctcgaagtattgatattttggtcacatttgtcacttttgtggctattgtgttattgtatgatattaattttgatgttgtgagc |
37373210 |
T |
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| Q |
116 |
ttatctatggaccattcttttcatgtcaacaaattcttcataataaataacattttcaaagaaaatagtggaaataaaattcccttgaaggtggaaataa |
215 |
Q |
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| T |
37373209 |
ttatctatggaccattcttttcatgtcaacaaattcttcataataaataacattttcaaagaaaatagtggaaataaaattcccttgaaggtggaaataa |
37373110 |
T |
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| Q |
216 |
atctacgtgtaaactgttgataaacatttctcttaaagtaact |
258 |
Q |
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| T |
37373109 |
atctacgtgtaaactgttgataaacatttctcttaatgtaact |
37373067 |
T |
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